Rorug07G0005800

Small nuclear ribonucleoprotein-associated protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0001710
Physical Location & Seq
Reverse (-)
463062 .. 469544
6483 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0005800.1

Sequence Viewer

Length: 3471 bp
ATGCATTGTGCCCTTCCAAGAGCTAATATTGATTTCCAGAAAGGTGCAGACAGAGGAAGAGATTCATTATCAAGGAAAGAACAAAGTAGTTTCAGGATATCTTCAGAGGAATGTGAAGTGCCTTCTGTCACATGGAGGAACTCCGATCATAGGTGTGCTATCTTTAAATTCCTTTCCCTTGAACCTGACGGACAGTGGAGAATTGTGGCACTACCGTTGCAATGTAATGATAATATAAATAACTTGGTATTGGATGCTGTGGTGAATATGGAAAGTCTTCGTCTTGTTTACTCACCACCGATTAGTCATTTCAAGTTTAATCGACAGAAGATGCAGAAGGGTCCTCCCATGGATGTTGCTTATTCAGTCAAGTCATTTACAAATAGAAGATTTACTGGTTCAACTATGAGACACCAATATCGAAATAAGACCTTAGTAAATAAAGCTACCAAATGGAATGTTTCCAAAAAATTTCAGAAGTCATTAACCTCCAATGATCCCTCAGCTATGATCCTAAATGATTCTAATGCTATTAAATCCTCAGATGTGGTTAGTAATAGAAAAATAGACGGCAATGTGAAGAGAAGTTCAAGAAAGAAGAGTAGAAAGAAGGGAAAGCAGAGCAAGAAAGTTTCATGCAATGTTGGCTCTACTGACCACGAAGTGATTTATGAGGAATATGGCAATGTAAGCTCAGCTTCTGAAACCTGTGGTAACAAGGACGGGGATGGACCAGCACCATCTTCAACTGCACCAGAAATTTCATTGCCAGATTCTAAGAATTCCAGTGATGAGGTAGGCACTGTGAGTAATTTTGAAAATCATATTGTACTGGAAGACTCTGCGTTTCCCATCTTAGATGGGGTGGAGGCTATTCAGCATACAAAGGCAAGCTGTTACAATGATCTCTATACCAAAGGTTACTCTGAGATGCATGACTCCTACGTTTTGGATTCAATTTCAATTGGCTCAAACAGTGATGGCAGTACTAATCTTGGTCATGACGAAAAACATGCTGAGAAGGAAATGTACAACACAGATATATCTGACCCAGCAGATTCGAGTTCTAGAAAGGGATATTTTACTCGTCAAAGGTCACTGAATGATGTTGTAAACACCTATAATCACACTGAGGACGCAGGGCAGGGTACTCATGATTTTGGCAGTAGTAGTGACATGAAATTTGTTGTGCCTAACAAGAGAAGTAGACAAAACAAAGTAGGACAACGGAGTGCAAATGTTCCCAAATCTGGTAGTGTTGGGAATATGCGGACAGGGGTCTGGCAAAAGGTCCTGAAGAATGATGCCAATGATTGCACTGGTGAATTGAAGAAAGCAAGTTCTGTTTACTCAAGGCTTGATCTCCCTTTGAGAGAGGCTCCCATGCTCAATAAAACCTGTAATGCTGTTGATGTTAATGTCTTTTTGAAGAGTGAAAATAGGAAACAGCAAAAAGATAAGGTCTCAAAAAAGTTGAAAAGAAAAAATGCTCCAGCATTGAAACGAGAATACAATTGTTATTCCAGGAAGGGATCTCATGCTAGCTTGGCTGGCTCAGATGGTTCTTTGAAGCTTCGGATGGATCAGAGTGATATATCAGATATCTTGTCTCAGGCGAAGGACAAGAAACCTAGTCGTCCAACGGCTGGATTCCAGAGCAGCAAAGTAGAATGCATGAACTCCGTATCAGTTCAAAGCATGCAACTCTGTCCAAATGAGATTGGTCATCTTGAAAATGTGTGTAAAACCGTCTCAGGCATGAAGAATCAAAATGTAGGAAATCAGGATGGCTCAATGCAAAAAACATACAATTCCTGGAAGGAACCAAGTCTGCATCAGGTGCAATCTTCAGTCTACCTTCCTCATCTACTTTATGATGCAGCAAGTCAAGAAGTACAGAGACAAATCCCGCTTGCAGAAAGCAGCAAGCAAAACCGGAGTAGTTCTGGATCTCTTACACACAAGTGGATGCCAATCGGGTTGAAGGACTCTGAGTTGGCAAGCTTTGTTAGATCTGAGAGTTCATTGCTTGAACATTCTGATGAGGGAGCTTCTAAGAGATGGACGATTAAAGACACTGTTAAGGGCAATGTGGTTTCTAAAACTGCAGTTGAGTCCATGGCTCAGGGTTCTGGACATGTAACTCGTTCTTCTGATGACACAGAGGGCAGGCTTCCTACATCAAATGCAGTTGAAGAGGTGGCCAACAACAAGCTTCATGCAGCTAACTATGTGAATAGTTATGATGTATCCAAAGGTCTAAATGCTTTTGAAGCTTATTCAAACAGAGTATTAGAAGCAGTAAATAATGCTTGTAGGGCACAGCTGGCATCTGAAGCTGTTCAAAGGACCACTGGTCATCCAATTGCCGAATTTGAAAGACTTCTGTATTATTCATCTCCCGTTATCCATCAATCACCTAGCCACACAAGTTGTCACACTTGCTGTTCATGGAACCAGGTTGACCAGGTTGGTGGTGTGTCATTGTGCAGACATGAGACACTAAATATCACTTTAGGATGCCTATGGGAGTGGTATGAGAAATATGGGAGCTATGGGCTGGAAATAAGGGCTGAGGAACCTGGGAGTCCAAAGAGATTGGGTGCTGATCGTTTAGCATTTCGTGCTTATTTTGTCCCTTATTTGTCAGGAATTCAGCTTTTCAGGAATGGTAGGAGTACTGGTACTAGAGATATTGACAATAGACTTCACAATCATCAAGTGTTAAGCGCATGCTGGAGTGGTGAGATATCCAGAAAATCCTCTAGTATTGGTAGTCTTCCAATATATTCACTACTTTTTTCTCATCTTGATTGCAAGGAAGATGCAGTCATCCCACCACTTGTAAACGAACTGGGTATTCGAGAAGCTTTTGCCAAAGATGTAACTGTTCAATCAGCTGACACAACAGGTTTCAGTGATTTAGAGCTACTTTTAGAATATTTTGAATATGAACAACCTCAACAAAGACGACCTCTATATGACAAGATAAAGGAGCTGGTTAGAGGTGATGGACATTCACATTCAAAAGTGTATGGCGATCCAACTACACTAGACTCTATAAATCTAAATGATCTACATCCCAGATCTTGGTATTCAGTGGCATGGTATCCTATTTACAGGATACCTGATGGTAACTTCCGTGCAGCATTTTTGACCTACCATTCACTTGGTTGTCTGGTTCGTAGAAATGCCAACTTTGAGTCTCGTAGTGTGGATGACTGTATTGTATCTCCAGTTGTGGGTCTTCAGAGTTACAACGCTCAGAGTGAATGCTGGTTCCAGTTAAGGCCCTCAGCACCAGCACAGACAACATTATCAAACTTAAACCCTTGTGAAATACTGGAGGAGCGTTTGAGGACACTTGAGGAGACGGCATCTCTTATGTCAAGAGCTGTTGTGAGCAAAGGAAGTATGACATCTGTAAACAGGCATCCAGACTATGAGTTCTTCCTCTCTAGGCGGCGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03040 ko05322 map03040 map05322
Pfam Domains
Protein Families
LSM

Protein Analysis

1156

Amino Acids

129.06

Weight (kDa)

8.67

Isoelectric Point (pI)

49.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF789 PF05623 790 - 1151 2e-65 Protein of unknown function (DUF789)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 1646, 3090
AccI GTMKAC 2 cut(s) 1207, 1854
AciI CCGC 3 cut(s) 1270, 1910, 3463
AclWI GGATC 6 cut(s) 491, 505, 1540, 1590, 1957, 3035
AcoI YGGCCR 1 cut(s) 2202
AcsI RAATTY 7 cut(s) 167, 470, 759, 781, 1181, 2372, 2652
AcuI CTGAAG 5 cut(s) 87, 1316, 1833, 2355, 3233
AdeI CACNNNGTG 1 cut(s) 664
AfaI GTAC 7 cut(s) 831, 988, 1031, 1150, 1896, 2680, 2686
AfiI CCNNNNNNNGG 5 cut(s) 150, 1250, 1646, 3090, 3242
AflIII ACRYGT 1 cut(s) 2137
AhdI GACNNNNNGTC 1 cut(s) 2355
AjnI CCWGG 5 cut(s) 1523, 1814, 2457, 2466, 2581
AleI CACNNNNGTG 1 cut(s) 1963
Alw26I GTCTC 8 cut(s) 403, 1468, 1614, 1756, 1894, 2492, 3210, 3365
AlwI GGATC 6 cut(s) 491, 505, 1540, 1590, 1957, 3035
AlwNI CAGNNNCTG 1 cut(s) 701
AoxI GGCC 2 cut(s) 2202, 3290
ApeKI GCWGC 5 cut(s) 1659, 1880, 1923, 2222, 3146
ApoI RAATTY 7 cut(s) 167, 470, 759, 781, 1181, 2372, 2652
ArsI GACNNNNNNTTYG 2 cut(s) 1166, 1198
Asp700I GAANNNNTTC 4 cut(s) 61, 276, 2340, 2382
AspLEI GCGC 2 cut(s) 2732, 3468
AspS9I GGNCC 5 cut(s) 341, 731, 1291, 2349, 3291
AsuHPI GGTGA 6 cut(s) 274, 285, 1334, 2409, 2756, 3020
AsuNHI GCTAGC 1 cut(s) 1541
AvaII GGWCC 4 cut(s) 341, 731, 1291, 2349
BaeGI GKGCMC 2 cut(s) 13, 2323
BalI TGGCCA 1 cut(s) 2204
BarI GAAGNNNNNNTAC 2 cut(s) 1013, 1045
BbsI GAAGAC 4 cut(s) 269, 843, 2771, 3239
BbvCI CCTCAGC 3 cut(s) 502, 2574, 3295
BbvI GCAGC 5 cut(s) 1671, 1892, 1935, 2234, 3158
BceAI ACGGC 3 cut(s) 586, 1659, 3390
BcgI CGANNNNNNTGC 2 cut(s) 995, 1029
BciT130I CCWGG 5 cut(s) 1525, 1816, 2459, 2468, 2583
BciVI GTATCC 3 cut(s) 2260, 3117, 3120
BcoDI GTCTC 8 cut(s) 403, 1468, 1614, 1756, 1894, 2492, 3210, 3365
BfaI CTAG 9 cut(s) 1068, 1542, 1632, 2421, 2688, 2766, 3053, 3459, 3469
BfmI CTRYAG 1 cut(s) 2106
BfoI RGCGCY 1 cut(s) 3469
BfuI GTATCC 3 cut(s) 2260, 3117, 3120
BglII AGATCT 2 cut(s) 2012, 3086
BisI GCNGC 6 cut(s) 1660, 1881, 1924, 2223, 3147, 3464
BlpI GCTNAGC 1 cut(s) 694
BlsI GCNGC 6 cut(s) 1661, 1882, 1925, 2224, 3148, 3465
BmcAI AGTACT 2 cut(s) 988, 2680
Bme1390I CCNGG 5 cut(s) 1525, 1816, 2459, 2468, 2583
Bme18I GGWCC 4 cut(s) 341, 731, 1291, 2349
BmeRI GACNNNNNGTC 1 cut(s) 2355
BmgT120I GGNCC 5 cut(s) 341, 731, 1291, 2349, 3291
BmiI GGNNCC 6 cut(s) 342, 1380, 1824, 2456, 2580, 3281
BmrFI CCNGG 5 cut(s) 1525, 1816, 2459, 2468, 2583
BmrI ACTGGG 1 cut(s) 2864
BmtI GCTAGC 1 cut(s) 1545
BmuI ACTGGG 1 cut(s) 2864
BoxI GACNNNNGTC 1 cut(s) 1277
BpiI GAAGAC 4 cut(s) 269, 843, 2771, 3239
BplI GAGNNNNNCTC 2 cut(s) 1363, 1395
BpmI CTGGAG 4 cut(s) 1476, 2758, 3219, 3365
Bpu10I CCTNAGC 4 cut(s) 502, 2124, 2574, 3295
Bpu1102I GCTNAGC 1 cut(s) 694
BpuEI CTTGAG 2 cut(s) 1336, 3386
BsaBI GATNNNNATC 2 cut(s) 1973, 3078
BsaI GGTCTC 1 cut(s) 1468
BsaJI CCNNGG 3 cut(s) 348, 2118, 2582
BsaWI WCCGGW 1 cut(s) 1935
BsaXI ACNNNNNCTCC 2 cut(s) 2668, 2698
Bsc4I CCNNNNNNNGG 5 cut(s) 150, 1250, 1646, 3090, 3242
Bse3DI GCAATG 7 cut(s) 227, 580, 646, 691, 764, 2024, 2095
Bse8I GATNNNNATC 2 cut(s) 1973, 3078
BseBI CCWGG 5 cut(s) 1525, 1816, 2459, 2468, 2583
BseDI CCNNGG 3 cut(s) 348, 2118, 2582
BseJI GATNNNNATC 2 cut(s) 1973, 3078
BseLI CCNNNNNNNGG 5 cut(s) 150, 1250, 1646, 3090, 3242
BseMI GCAATG 7 cut(s) 227, 580, 646, 691, 764, 2024, 2095
BseRI GAGGAG 2 cut(s) 3362, 3383
BseSI GKGCMC 2 cut(s) 13, 2323
BseXI GCAGC 5 cut(s) 1671, 1892, 1935, 2234, 3158
BseYI CCCAGC 1 cut(s) 1051
BsgI GTGCAG 4 cut(s) 66, 735, 2509, 3165
BshFI GGCC 2 cut(s) 2204, 3292
BsiSI CCGG 1 cut(s) 1936
BslFI GGGAC 1 cut(s) 2621
BslI CCNNNNNNNGG 5 cut(s) 150, 1250, 1646, 3090, 3242
BsmAI GTCTC 8 cut(s) 403, 1468, 1614, 1756, 1894, 2492, 3210, 3365
BsmBI CGTCTC 2 cut(s) 1756, 3365
BsmFI GGGAC 1 cut(s) 2621
BsmI GAATGC 2 cut(s) 1676, 3278
BsnI GGCC 2 cut(s) 2204, 3292
Bso31I GGTCTC 1 cut(s) 1468
Bsp1286I GDGCHC 2 cut(s) 13, 2323
Bsp1407I TGTACA 1 cut(s) 1029
Bsp1720I GCTNAGC 1 cut(s) 694
Bsp19I CCATGG 2 cut(s) 348, 2118
BspACI CCGC 3 cut(s) 1270, 1910, 3463
BspANI GGCC 2 cut(s) 2204, 3292
BspHI TCATGA 2 cut(s) 1000, 1153
BspLI GGNNCC 6 cut(s) 342, 1380, 1824, 2456, 2580, 3281
BspMAI CTGCAG 1 cut(s) 2110
BspOI GCTAGC 1 cut(s) 1545
BspPI GGATC 6 cut(s) 491, 505, 1540, 1590, 1957, 3035
BspTNI GGTCTC 1 cut(s) 1468
BsrDI GCAATG 7 cut(s) 227, 580, 646, 691, 764, 2024, 2095
BsrGI TGTACA 1 cut(s) 1029
BssECI CCNNGG 3 cut(s) 348, 2118, 2582
BssT1I CCWWGG 2 cut(s) 348, 2118
Bst2UI CCWGG 5 cut(s) 1525, 1816, 2459, 2468, 2583
Bst4CI ACNGT 8 cut(s) 195, 216, 805, 977, 1750, 2080, 2890, 3224
Bst6I CTCTTC 5 cut(s) 52, 575, 593, 1424, 2190
BstAPI GCANNNNNTGC 2 cut(s) 1840, 2624
BstAUI TGTACA 1 cut(s) 1029
BstDSI CCRYGG 2 cut(s) 348, 2118
BstH2I RGCGCY 1 cut(s) 3469
BstHHI GCGC 2 cut(s) 2732, 3468
BstMAI GTCTC 8 cut(s) 403, 1468, 1614, 1756, 1894, 2492, 3210, 3365
BstNI CCWGG 5 cut(s) 1525, 1816, 2459, 2468, 2583
BstNSI RCATGY 4 cut(s) 1016, 1702, 2141, 2736
BstPAI GACNNNNGTC 1 cut(s) 1277
BstSCI CCNGG 5 cut(s) 1523, 1814, 2457, 2466, 2581
BstSFI CTRYAG 1 cut(s) 2106
BstSLI GKGCMC 2 cut(s) 13, 2323
BstV1I GCAGC 5 cut(s) 1671, 1892, 1935, 2234, 3158
BstV2I GAAGAC 4 cut(s) 269, 843, 2771, 3239
BstX2I RGATCY 4 cut(s) 1532, 1949, 2012, 3086
BstXI CCANNNNNNTGG 2 cut(s) 2474, 3170
BstYI RGATCY 4 cut(s) 1532, 1949, 2012, 3086
BsuI GTATCC 3 cut(s) 2260, 3117, 3120
BsuRI GGCC 2 cut(s) 2204, 3292
BtgI CCRYGG 2 cut(s) 348, 2118
CaiI CAGNNNCTG 1 cut(s) 701
CciI TCATGA 2 cut(s) 1000, 1153
CfoI GCGC 2 cut(s) 2732, 3468
Cfr13I GGNCC 5 cut(s) 341, 731, 1291, 2349, 3291
CseI GACGC 1 cut(s) 1145
CsiI ACCWGGT 2 cut(s) 2457, 2466
Csp6I GTAC 7 cut(s) 830, 987, 1030, 1149, 1895, 2679, 2685
CspCI CAANNNNNGTGG 2 cut(s) 2414, 2449
CviQI GTAC 7 cut(s) 830, 987, 1030, 1149, 1895, 2679, 2685
DraI TTTAAA 1 cut(s) 166
DraIII CACNNNGTG 1 cut(s) 664
DriI GACNNNNNGTC 1 cut(s) 2355
EaeI YGGCCR 1 cut(s) 2202
Eam1104I CTCTTC 5 cut(s) 52, 575, 593, 1424, 2190
Eam1105I GACNNNNNGTC 1 cut(s) 2355
EarI CTCTTC 5 cut(s) 52, 575, 593, 1424, 2190
Eco130I CCWWGG 2 cut(s) 348, 2118
Eco31I GGTCTC 1 cut(s) 1468
Eco32I GATATC 3 cut(s) 99, 1603, 2751
Eco47I GGWCC 4 cut(s) 341, 731, 1291, 2349
Eco57I CTGAAG 5 cut(s) 87, 1316, 1833, 2355, 3233
EcoO109I RGGNCCY 3 cut(s) 341, 1291, 3291
EcoRI GAATTC 2 cut(s) 781, 2652
EcoRII CCWGG 5 cut(s) 1523, 1814, 2457, 2466, 2581
EcoRV GATATC 3 cut(s) 99, 1603, 2751
EcoT14I CCWWGG 2 cut(s) 348, 2118
EcoT22I ATGCAT 3 cut(s) 6, 936, 1676
ErhI CCWWGG 2 cut(s) 348, 2118
Esp3I CGTCTC 2 cut(s) 1756, 3365
FalI AAGNNNNNCTT 2 cut(s) 682, 714
FaqI GGGAC 1 cut(s) 2621
FauI CCCGC 1 cut(s) 1917
FblI GTMKAC 2 cut(s) 1207, 1854
Fnu4HI GCNGC 6 cut(s) 1660, 1881, 1924, 2223, 3147, 3464
Fsp4HI GCNGC 6 cut(s) 1660, 1881, 1924, 2223, 3147, 3464
FspBI CTAG 9 cut(s) 1068, 1542, 1632, 2421, 2688, 2766, 3053, 3459, 3469
GlaI GCGC 2 cut(s) 2731, 3467
GluI GCNGC 6 cut(s) 1660, 1881, 1924, 2223, 3147, 3464
GsaI CCCAGC 1 cut(s) 1055
GsuI CTGGAG 4 cut(s) 1476, 2758, 3219, 3365
HaeII RGCGCY 1 cut(s) 3469
HaeIII GGCC 2 cut(s) 2204, 3292
HapII CCGG 1 cut(s) 1936
HgaI GACGC 1 cut(s) 1145
HhaI GCGC 2 cut(s) 2732, 3468
Hin6I GCGC 2 cut(s) 2730, 3466
HinP1I GCGC 2 cut(s) 2730, 3466
HincII GTYRAC 1 cut(s) 2464
HindII GTYRAC 1 cut(s) 2464
HindIII AAGCTT 5 cut(s) 1571, 2002, 2213, 2274, 2868
HpaII CCGG 1 cut(s) 1936
HphI GGTGA 6 cut(s) 274, 285, 1334, 2409, 2756, 3020
Hpy166II GTNNAC 8 cut(s) 289, 1114, 1208, 1348, 1855, 2464, 2848, 3427
Hpy8I GTNNAC 8 cut(s) 289, 1114, 1208, 1348, 1855, 2464, 2848, 3427
HpyCH4III ACNGT 8 cut(s) 195, 216, 805, 977, 1750, 2080, 2890, 3224
HpyCH4IV ACGT 1 cut(s) 945
HpySE526I ACGT 1 cut(s) 945
HspAI GCGC 2 cut(s) 2730, 3466
LmnI GCTCC 6 cut(s) 1384, 1495, 2048, 2550, 2995, 3349
Lsp1109I GCAGC 5 cut(s) 1671, 1892, 1935, 2234, 3158
MabI ACCWGGT 2 cut(s) 2457, 2466
MaeI CTAG 9 cut(s) 1068, 1542, 1632, 2421, 2688, 2766, 3053, 3459, 3469
MaeII ACGT 1 cut(s) 945
MfeI CAATTG 3 cut(s) 963, 1513, 2364
MflI RGATCY 4 cut(s) 1532, 1949, 2012, 3086
MhlI GDGCHC 2 cut(s) 13, 2323
MlsI TGGCCA 1 cut(s) 2204
MluNI TGGCCA 1 cut(s) 2204
MlyI GAGTC 7 cut(s) 833, 932, 1982, 2123, 2596, 3050, 3212
MmeI TCCRAC 2 cut(s) 1664, 3068
Mox20I TGGCCA 1 cut(s) 2204
Mph1103I ATGCAT 3 cut(s) 6, 936, 1676
MroXI GAANNNNTTC 4 cut(s) 61, 276, 2340, 2382
MscI TGGCCA 1 cut(s) 2204
MslI CAYNNNNRTG 3 cut(s) 153, 1963, 2040
Msp20I TGGCCA 1 cut(s) 2204
MspA1I CMGCKG 2 cut(s) 2326, 2900
MspI CCGG 1 cut(s) 1936
MspR9I CCNGG 5 cut(s) 1525, 1816, 2459, 2468, 2583
MunI CAATTG 3 cut(s) 963, 1513, 2364
Mva1269I GAATGC 2 cut(s) 1676, 3278
MvaI CCWGG 5 cut(s) 1525, 1816, 2459, 2468, 2583
NcoI CCATGG 2 cut(s) 348, 2118
NheI GCTAGC 1 cut(s) 1541
NlaIV GGNNCC 6 cut(s) 342, 1380, 1824, 2456, 2580, 3281
NmuCI GTSAC 4 cut(s) 127, 1095, 1172, 2435
NsiI ATGCAT 3 cut(s) 6, 936, 1676
NspI RCATGY 4 cut(s) 1016, 1702, 2141, 2736
OliI CACNNNNGTG 1 cut(s) 1963
PaeI GCATGC 2 cut(s) 1702, 2736
PagI TCATGA 2 cut(s) 1000, 1153
PciI ACATGT 1 cut(s) 2137
PctI GAATGC 2 cut(s) 1676, 3278
PdmI GAANNNNTTC 4 cut(s) 61, 276, 2340, 2382
PfeI GAWTC 7 cut(s) 62, 521, 773, 953, 1058, 1650, 1765
PflMI CCANNNNNTGG 2 cut(s) 1646, 3090
PfoI TCCNGGA 2 cut(s) 1523, 1814
PkrI GCNGC 6 cut(s) 1661, 1882, 1925, 2224, 3148, 3465
PleI GAGTC 7 cut(s) 833, 932, 1982, 2122, 2595, 3050, 3211
PpsI GAGTC 7 cut(s) 833, 932, 1982, 2122, 2595, 3050, 3211
PpuMI RGGWCCY 2 cut(s) 341, 1291
PscI ACATGT 1 cut(s) 2137
PshAI GACNNNNGTC 1 cut(s) 1277
Psp5II RGGWCCY 2 cut(s) 341, 1291
Psp6I CCWGG 5 cut(s) 1523, 1814, 2457, 2466, 2581
PspFI CCCAGC 1 cut(s) 1051
PspGI CCWGG 5 cut(s) 1523, 1814, 2457, 2466, 2581
PspN4I GGNNCC 6 cut(s) 342, 1380, 1824, 2456, 2580, 3281
PspPI GGNCC 5 cut(s) 341, 731, 1291, 2349, 3291
PspPPI RGGWCCY 2 cut(s) 341, 1291
PstI CTGCAG 1 cut(s) 2110
PstNI CAGNNNCTG 1 cut(s) 701
PsuI RGATCY 4 cut(s) 1532, 1949, 2012, 3086
PvuII CAGCTG 2 cut(s) 2326, 2900
RsaI GTAC 7 cut(s) 831, 988, 1031, 1150, 1896, 2680, 2686
RsaNI GTAC 7 cut(s) 830, 987, 1030, 1149, 1895, 2679, 2685
RseI CAYNNNNRTG 3 cut(s) 153, 1963, 2040
SatI GCNGC 6 cut(s) 1660, 1881, 1924, 2223, 3147, 3464
Sau96I GGNCC 5 cut(s) 341, 731, 1291, 2349, 3291
ScaI AGTACT 2 cut(s) 988, 2680
SchI GAGTC 7 cut(s) 833, 932, 1982, 2123, 2596, 3050, 3212
ScrFI CCNGG 5 cut(s) 1525, 1816, 2459, 2468, 2583
SduI GDGCHC 2 cut(s) 13, 2323
SexAI ACCWGGT 2 cut(s) 2457, 2466
SfcI CTRYAG 1 cut(s) 2106
SinI GGWCC 4 cut(s) 341, 731, 1291, 2349
SmiMI CAYNNNNRTG 3 cut(s) 153, 1963, 2040
SmlI CTYRAG 2 cut(s) 1351, 3365
SmoI CTYRAG 2 cut(s) 1351, 3365
SphI GCATGC 2 cut(s) 1702, 2736
SsiI CCGC 3 cut(s) 1270, 1910, 3463
SspI AATATT 2 cut(s) 28, 2942
SspMI CTAG 9 cut(s) 1068, 1542, 1632, 2421, 2688, 2766, 3053, 3459, 3469
StyD4I CCNGG 5 cut(s) 1523, 1814, 2457, 2466, 2581
StyI CCWWGG 2 cut(s) 348, 2118
TaaI ACNGT 8 cut(s) 195, 216, 805, 977, 1750, 2080, 2890, 3224
TaiI ACGT 1 cut(s) 948
TaqI TCGA 4 cut(s) 322, 421, 1061, 2863
TatI WGTACW 5 cut(s) 829, 986, 1029, 1894, 2678
TauI GCSGC 1 cut(s) 3466
TfiI GAWTC 7 cut(s) 62, 521, 773, 953, 1058, 1650, 1765
TseFI GTSAC 4 cut(s) 127, 1095, 1172, 2435
TseI GCWGC 5 cut(s) 1659, 1880, 1923, 2222, 3146
Tsp45I GTSAC 4 cut(s) 127, 1095, 1172, 2435
TspGWI ACGGA 4 cut(s) 204, 1243, 1672, 3131
Van91I CCANNNNNTGG 2 cut(s) 1646, 3090
VpaK11BI GGWCC 4 cut(s) 341, 731, 1291, 2349
XapI RAATTY 7 cut(s) 167, 470, 759, 781, 1181, 2372, 2652
XbaI TCTAGA 1 cut(s) 1067
XceI RCATGY 4 cut(s) 1016, 1702, 2141, 2736
XmiI GTMKAC 2 cut(s) 1207, 1854
XmnI GAANNNNTTC 4 cut(s) 61, 276, 2340, 2382
XspI CTAG 9 cut(s) 1068, 1542, 1632, 2421, 2688, 2766, 3053, 3459, 3469
ZrmI AGTACT 2 cut(s) 988, 2680
Zsp2I ATGCAT 3 cut(s) 6, 936, 1676
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.