No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g13324 |
| prunus_persica | Prupe.6G164700_v2.0.a1 Prupe.6G182100_v2.0.a1 |
| pyrus_communis | pycom06g06460 pycom15g24790 pycom15g27610 |
| rosa_chinensis | RchiOBHm_Chr5g0080361 |
| rosa_laevigata | RLG00000018542 RLG00000036161 RLG00000036162 |
| rosa_multiflora | Rmu_sc0007310.1_g000012 |
| rosa_roxburghii | Rroxscaffold_4G00288540 Rroxscaffold_4G00288590 Rroxscaffold_4G00323350 |
| rosa_rugosa | Rorug01G0105500 Rorug01G0166300 Rorug02G0169100 |
| rosa_samantha | Rh1AG080500 Rh1AG329900 Rh1BG311500 Rh1DG137800 Rh1DG343300 Rh2AG387800 Rh2CG375100 Rh3DG100300 Rh5BG152800 Rh5DG277500 Rh6AG151900 |
| rosa_wichuraiana | Rw1G029250 Rw5G024840 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 107, 120 |
| AflII | CTTAAG | 1 cut(s) | 106 |
| AgsI | TTSAA | 2 cut(s) | 82, 124 |
| AlwI | GGATC | 2 cut(s) | 107, 120 |
| AoxI | GGCC | 1 cut(s) | 165 |
| BamHI | GGATCC | 1 cut(s) | 112 |
| BfaI | CTAG | 1 cut(s) | 134 |
| BfrI | CTTAAG | 1 cut(s) | 106 |
| BmiI | GGNNCC | 1 cut(s) | 114 |
| BmrI | ACTGGG | 1 cut(s) | 137 |
| BmuI | ACTGGG | 1 cut(s) | 137 |
| BpuEI | CTTGAG | 1 cut(s) | 38 |
| Bse1I | ACTGG | 1 cut(s) | 132 |
| BseNI | ACTGG | 1 cut(s) | 132 |
| BshFI | GGCC | 1 cut(s) | 167 |
| BsnI | GGCC | 1 cut(s) | 167 |
| Bsp143I | GATC | 2 cut(s) | 13, 112 |
| BspANI | GGCC | 1 cut(s) | 167 |
| BspLI | GGNNCC | 1 cut(s) | 114 |
| BspPI | GGATC | 2 cut(s) | 107, 120 |
| BspTI | CTTAAG | 1 cut(s) | 106 |
| BsrI | ACTGG | 1 cut(s) | 132 |
| BssMI | GATC | 2 cut(s) | 13, 112 |
| Bst6I | CTCTTC | 2 cut(s) | 42, 88 |
| BstAFI | CTTAAG | 1 cut(s) | 106 |
| BstKTI | GATC | 2 cut(s) | 16, 115 |
| BstMBI | GATC | 2 cut(s) | 13, 112 |
| BstX2I | RGATCY | 1 cut(s) | 112 |
| BstYI | RGATCY | 1 cut(s) | 112 |
| BsuRI | GGCC | 1 cut(s) | 167 |
| BtgZI | GCGATG | 1 cut(s) | 24 |
| CviJI | RGCY | 3 cut(s) | 24, 61, 167 |
| CviKI_1 | RGCY | 3 cut(s) | 24, 61, 167 |
| DpnI | GATC | 2 cut(s) | 15, 114 |
| DpnII | GATC | 2 cut(s) | 13, 112 |
| Eam1104I | CTCTTC | 2 cut(s) | 42, 88 |
| EarI | CTCTTC | 2 cut(s) | 42, 88 |
| FaiI | YATR | 5 cut(s) | 90, 149, 170, 172, 174 |
| FspBI | CTAG | 1 cut(s) | 134 |
| HaeIII | GGCC | 1 cut(s) | 167 |
| Hpy188III | TCNNGA | 2 cut(s) | 17, 134 |
| Kzo9I | GATC | 2 cut(s) | 13, 112 |
| LpnPI | CCDG | 2 cut(s) | 75, 113 |
| MaeI | CTAG | 1 cut(s) | 134 |
| MalI | GATC | 2 cut(s) | 15, 114 |
| MboI | GATC | 2 cut(s) | 13, 112 |
| MboII | GAAGA | 2 cut(s) | 59, 105 |
| MflI | RGATCY | 1 cut(s) | 112 |
| MluCI | AATT | 1 cut(s) | 180 |
| MmeI | TCCRAC | 1 cut(s) | 167 |
| MnlI | CCTC | 3 cut(s) | 27, 43, 157 |
| MseI | TTAA | 2 cut(s) | 107, 190 |
| MspCI | CTTAAG | 1 cut(s) | 106 |
| NdeII | GATC | 2 cut(s) | 13, 112 |
| NlaIV | GGNNCC | 1 cut(s) | 114 |
| PspN4I | GGNNCC | 1 cut(s) | 114 |
| PsuI | RGATCY | 1 cut(s) | 112 |
| SaqAI | TTAA | 2 cut(s) | 107, 190 |
| Sau3AI | GATC | 2 cut(s) | 13, 112 |
| SetI | ASST | 2 cut(s) | 38, 54 |
| SgeI | CNNG | 7 cut(s) | 29, 38, 51, 74, 94, 140, 146 |
| SmlI | CTYRAG | 2 cut(s) | 17, 106 |
| SmoI | CTYRAG | 2 cut(s) | 17, 106 |
| Sse9I | AATT | 1 cut(s) | 180 |
| SspMI | CTAG | 1 cut(s) | 134 |
| TasI | AATT | 1 cut(s) | 180 |
| Tru1I | TTAA | 2 cut(s) | 107, 190 |
| Tru9I | TTAA | 2 cut(s) | 107, 190 |
| TspDTI | ATGAA | 1 cut(s) | 60 |
| TspGWI | ACGGA | 1 cut(s) | 176 |
| Vha464I | CTTAAG | 1 cut(s) | 106 |
| XbaI | TCTAGA | 1 cut(s) | 133 |
| XspI | CTAG | 1 cut(s) | 134 |