No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g12570 FvH4_3g12570 FvH4_6g07650 FvH4_7g19271 FvH4_7g19272 |
| malus_domestica | MD07G1173200.v1.1 |
| prunus_persica | Prupe.2G212400_v2.0.a1 Prupe.5G001500_v2.0.a1 |
| pyrus_communis | pycom07g16790 |
| rosa_chinensis | RchiOBHm_Chr1g0363121 RchiOBHm_Chr1g0363131 RchiOBHm_Chr1g0363141 |
| rosa_laevigata | RLG00000027589 RLG00000027591 RLG00000027592 |
| rosa_multiflora | Rmu_co8316487.1_g000001 Rmu_sc0004472.1_g000010 Rmu_sc0005586.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00293420 Rroxscaffold_4G00293430 Rroxscaffold_4G00293450 |
| rosa_rugosa | Rorug01G0304700 Rorug01G0304700 Rorug01G0304800 Rorug01G0304900 Rorug01G0305000 |
| rosa_samantha | Rh1AG313600 Rh1AG313700 Rh1BG277000 Rh1BG277100 Rh1BG277200 Rh1CG293600 Rh1CG293700 Rh1DG307600 Rh1DG307700 Rh1DG307800 |
| rosa_wichuraiana | Rw1G027790 Rw1G027800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 56 |
| AcoI | YGGCCR | 1 cut(s) | 94 |
| AfaI | GTAC | 1 cut(s) | 68 |
| AflII | CTTAAG | 1 cut(s) | 137 |
| AgsI | TTSAA | 1 cut(s) | 79 |
| AluBI | AGCT | 3 cut(s) | 106, 136, 199 |
| AluI | AGCT | 3 cut(s) | 106, 136, 199 |
| Alw26I | GTCTC | 3 cut(s) | 9, 232, 244 |
| AoxI | GGCC | 2 cut(s) | 84, 94 |
| AsuHPI | GGTGA | 1 cut(s) | 191 |
| BbvCI | CCTCAGC | 1 cut(s) | 174 |
| BccI | CCATC | 2 cut(s) | 176, 220 |
| BclI | TGATCA | 1 cut(s) | 117 |
| BcoDI | GTCTC | 3 cut(s) | 9, 232, 244 |
| BfrI | CTTAAG | 1 cut(s) | 137 |
| BisI | GCNGC | 1 cut(s) | 56 |
| BlsI | GCNGC | 1 cut(s) | 57 |
| BmcAI | AGTACT | 1 cut(s) | 68 |
| Bpu10I | CCTNAGC | 2 cut(s) | 33, 174 |
| BseGI | GGATG | 1 cut(s) | 154 |
| BseMII | CTCAG | 1 cut(s) | 165 |
| BseYI | CCCAGC | 1 cut(s) | 272 |
| BsgI | GTGCAG | 1 cut(s) | 148 |
| BshFI | GGCC | 2 cut(s) | 86, 96 |
| BsiSI | CCGG | 1 cut(s) | 97 |
| BslFI | GGGAC | 1 cut(s) | 170 |
| BsmAI | GTCTC | 3 cut(s) | 9, 232, 244 |
| BsmBI | CGTCTC | 1 cut(s) | 244 |
| BsmFI | GGGAC | 1 cut(s) | 170 |
| BsnI | GGCC | 2 cut(s) | 86, 96 |
| Bsp143I | GATC | 1 cut(s) | 117 |
| BspACI | CCGC | 1 cut(s) | 56 |
| BspANI | GGCC | 2 cut(s) | 86, 96 |
| BspCNI | CTCAG | 1 cut(s) | 166 |
| BspTI | CTTAAG | 1 cut(s) | 137 |
| BssMI | GATC | 1 cut(s) | 117 |
| Bst4CI | ACNGT | 1 cut(s) | 161 |
| BstAFI | CTTAAG | 1 cut(s) | 137 |
| BstDEI | CTNAG | 2 cut(s) | 33, 174 |
| BstF5I | GGATG | 1 cut(s) | 154 |
| BstKTI | GATC | 1 cut(s) | 120 |
| BstMAI | GTCTC | 3 cut(s) | 9, 232, 244 |
| BstMBI | GATC | 1 cut(s) | 117 |
| BsuRI | GGCC | 2 cut(s) | 86, 96 |
| BtsCI | GGATG | 1 cut(s) | 154 |
| Csp6I | GTAC | 1 cut(s) | 67 |
| CviAII | CATG | 1 cut(s) | 8 |
| CviJI | RGCY | 6 cut(s) | 32, 86, 96, 106, 136, 199 |
| CviKI_1 | RGCY | 6 cut(s) | 32, 86, 96, 106, 136, 199 |
| CviQI | GTAC | 1 cut(s) | 67 |
| DdeI | CTNAG | 2 cut(s) | 33, 174 |
| DpnI | GATC | 1 cut(s) | 119 |
| DpnII | GATC | 1 cut(s) | 117 |
| EaeI | YGGCCR | 1 cut(s) | 94 |
| EcoT22I | ATGCAT | 1 cut(s) | 13 |
| Esp3I | CGTCTC | 1 cut(s) | 244 |
| FaeI | CATG | 1 cut(s) | 11 |
| FaiI | YATR | 3 cut(s) | 9, 51, 224 |
| FaqI | GGGAC | 1 cut(s) | 170 |
| FatI | CATG | 1 cut(s) | 7 |
| FbaI | TGATCA | 1 cut(s) | 117 |
| Fnu4HI | GCNGC | 1 cut(s) | 56 |
| FokI | GGATG | 1 cut(s) | 161 |
| Fsp4HI | GCNGC | 1 cut(s) | 56 |
| GluI | GCNGC | 1 cut(s) | 56 |
| GsaI | CCCAGC | 1 cut(s) | 276 |
| HaeIII | GGCC | 2 cut(s) | 86, 96 |
| HapII | CCGG | 1 cut(s) | 97 |
| Hin1II | CATG | 1 cut(s) | 11 |
| HpaII | CCGG | 1 cut(s) | 97 |
| HphI | GGTGA | 1 cut(s) | 191 |
| Hpy188III | TCNNGA | 3 cut(s) | 155, 237, 247 |
| HpyAV | CCTTC | 1 cut(s) | 76 |
| HpyCH4III | ACNGT | 1 cut(s) | 161 |
| HpyCH4V | TGCA | 2 cut(s) | 11, 129 |
| HpyF3I | CTNAG | 2 cut(s) | 33, 174 |
| Hsp92II | CATG | 1 cut(s) | 11 |
| Ksp22I | TGATCA | 1 cut(s) | 117 |
| Kzo9I | GATC | 1 cut(s) | 117 |
| LmnI | GCTCC | 1 cut(s) | 133 |
| LpnPI | CCDG | 6 cut(s) | 110, 115, 149, 232, 258, 269 |
| MalI | GATC | 1 cut(s) | 119 |
| MboI | GATC | 1 cut(s) | 117 |
| MboII | GAAGA | 1 cut(s) | 91 |
| MluCI | AATT | 1 cut(s) | 242 |
| MnlI | CCTC | 4 cut(s) | 169, 223, 259, 286 |
| Mph1103I | ATGCAT | 1 cut(s) | 13 |
| MseI | TTAA | 2 cut(s) | 63, 138 |
| MspCI | CTTAAG | 1 cut(s) | 137 |
| MspI | CCGG | 1 cut(s) | 97 |
| NdeII | GATC | 1 cut(s) | 117 |
| NlaIII | CATG | 1 cut(s) | 11 |
| NsiI | ATGCAT | 1 cut(s) | 13 |
| PkrI | GCNGC | 1 cut(s) | 57 |
| PspFI | CCCAGC | 1 cut(s) | 272 |
| RsaI | GTAC | 1 cut(s) | 68 |
| RsaNI | GTAC | 1 cut(s) | 67 |
| SaqAI | TTAA | 2 cut(s) | 63, 138 |
| SatI | GCNGC | 1 cut(s) | 56 |
| Sau3AI | GATC | 1 cut(s) | 117 |
| ScaI | AGTACT | 1 cut(s) | 68 |
| SetI | ASST | 6 cut(s) | 108, 138, 144, 201, 270, 288 |
| SmlI | CTYRAG | 1 cut(s) | 137 |
| SmoI | CTYRAG | 1 cut(s) | 137 |
| Sse9I | AATT | 1 cut(s) | 242 |
| SsiI | CCGC | 1 cut(s) | 56 |
| TaaI | ACNGT | 1 cut(s) | 161 |
| TaqI | TCGA | 1 cut(s) | 236 |
| TasI | AATT | 1 cut(s) | 242 |
| TatI | WGTACW | 1 cut(s) | 66 |
| TauI | GCSGC | 1 cut(s) | 58 |
| Tru1I | TTAA | 2 cut(s) | 63, 138 |
| Tru9I | TTAA | 2 cut(s) | 63, 138 |
| Vha464I | CTTAAG | 1 cut(s) | 137 |
| ZrmI | AGTACT | 1 cut(s) | 68 |
| Zsp2I | ATGCAT | 1 cut(s) | 13 |