Rh1DG251900

Protein of unknown function (DUF632)

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
Physical Location & Seq
Reverse (-)
46532072 .. 46532338
267 bp
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UTR
Exon/CDS
Intron
Rh1DG251900.1

Sequence Viewer

Length: 267 bp
ATGCCCAAATCCCAACCCACCGCCCACCAAAACCACTCGTATTCTCAGTCGGAGAAGTACGCCCAGTCCGAAACCGAGAGATCAGAGTACGATTTCTTCATCCCCAACCGTAACCCTAAAGGTCCGACCAAGACTCAGTCGGAGAAGTACGCTCAGTCGGAGAGAGAAGAGGTCCATTGCAGCGAGTGGGGCGATCACGATCGCTACAGCACCACGAGCTCGTCTGAAAACGAAGACGACTACAGGGATTCGAGATCCGAGATCTGA

Protein Analysis

88

Amino Acids

10.35

Weight (kDa)

4.98

Isoelectric Point (pI)

86.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 21
AclWI GGATC 1 cut(s) 249
AfaI GTAC 3 cut(s) 59, 89, 149
AluBI AGCT 1 cut(s) 219
AluI AGCT 1 cut(s) 219
Alw21I GWGCWC 1 cut(s) 221
AlwI GGATC 1 cut(s) 249
ApeKI GCWGC 1 cut(s) 180
AspS9I GGNCC 2 cut(s) 122, 172
AvaII GGWCC 2 cut(s) 122, 172
BanII GRGCYC 1 cut(s) 221
BarI GAAGNNNNNNTAC 2 cut(s) 80, 112
BauI CACGAG 1 cut(s) 214
BbsI GAAGAC 1 cut(s) 240
Bbv12I GWGCWC 1 cut(s) 221
BbvI GCAGC 1 cut(s) 192
BfmI CTRYAG 2 cut(s) 205, 241
BglII AGATCT 1 cut(s) 261
BisI GCNGC 1 cut(s) 181
BlsI GCNGC 1 cut(s) 182
Bme18I GGWCC 2 cut(s) 122, 172
BmgT120I GGNCC 2 cut(s) 122, 172
BmrI ACTGGG 1 cut(s) 58
BmuI ACTGGG 1 cut(s) 58
BpiI GAAGAC 1 cut(s) 240
BsaBI GATNNNNATC 1 cut(s) 198
Bse1I ACTGG 1 cut(s) 64
Bse3DI GCAATG 1 cut(s) 175
Bse8I GATNNNNATC 1 cut(s) 198
BseGI GGATG 1 cut(s) 99
BseJI GATNNNNATC 1 cut(s) 198
BseMI GCAATG 1 cut(s) 175
BseMII CTCAG 3 cut(s) 59, 149, 167
BseNI ACTGG 1 cut(s) 64
BseXI GCAGC 1 cut(s) 192
Bsh1285I CGRYCG 1 cut(s) 202
BsiEI CGRYCG 1 cut(s) 202
BsiHKAI GWGCWC 1 cut(s) 221
Bsp1286I GDGCHC 1 cut(s) 221
Bsp143I GATC 5 cut(s) 80, 193, 199, 254, 261
BspACI CCGC 1 cut(s) 21
BspCNI CTCAG 3 cut(s) 58, 148, 166
BspPI GGATC 1 cut(s) 249
BsrDI GCAATG 1 cut(s) 175
BsrI ACTGG 1 cut(s) 64
BssMI GATC 5 cut(s) 80, 193, 199, 254, 261
BssSI CACGAG 1 cut(s) 214
Bst2BI CACGAG 1 cut(s) 214
Bst4CI ACNGT 1 cut(s) 110
Bst6I CTCTTC 1 cut(s) 162
BstDEI CTNAG 3 cut(s) 45, 135, 153
BstF5I GGATG 1 cut(s) 99
BstKTI GATC 5 cut(s) 83, 196, 202, 257, 264
BstMBI GATC 5 cut(s) 80, 193, 199, 254, 261
BstMCI CGRYCG 1 cut(s) 202
BstMWI GCNNNNNNNGC 2 cut(s) 189, 216
BstSFI CTRYAG 2 cut(s) 205, 241
BstV1I GCAGC 1 cut(s) 192
BstV2I GAAGAC 1 cut(s) 240
BstX2I RGATCY 2 cut(s) 254, 261
BstYI RGATCY 2 cut(s) 254, 261
BtsCI GGATG 1 cut(s) 99
Cfr13I GGNCC 2 cut(s) 122, 172
Csp6I GTAC 3 cut(s) 58, 88, 148
CviJI RGCY 1 cut(s) 219
CviKI_1 RGCY 1 cut(s) 219
CviQI GTAC 3 cut(s) 58, 88, 148
DdeI CTNAG 3 cut(s) 45, 135, 153
DpnI GATC 5 cut(s) 82, 195, 201, 256, 263
DpnII GATC 5 cut(s) 80, 193, 199, 254, 261
Eam1104I CTCTTC 1 cut(s) 162
EarI CTCTTC 1 cut(s) 162
Ecl136II GAGCTC 1 cut(s) 219
Eco24I GRGCYC 1 cut(s) 221
Eco47I GGWCC 2 cut(s) 122, 172
Eco53kI GAGCTC 1 cut(s) 219
EcoICRI GAGCTC 1 cut(s) 219
EcoT38I GRGCYC 1 cut(s) 221
Fnu4HI GCNGC 1 cut(s) 181
FokI GGATG 1 cut(s) 86
FriOI GRGCYC 1 cut(s) 221
Fsp4HI GCNGC 1 cut(s) 181
GluI GCNGC 1 cut(s) 181
HinfI GANTC 2 cut(s) 133, 248
Hpy188I TCNGA 9 cut(s) 52, 70, 85, 126, 142, 160, 226, 259, 266
Hpy188III TCNNGA 2 cut(s) 197, 252
HpyCH4III ACNGT 1 cut(s) 110
HpyCH4V TGCA 1 cut(s) 180
HpyF10VI GCNNNNNNNGC 2 cut(s) 189, 216
HpyF3I CTNAG 3 cut(s) 45, 135, 153
Kzo9I GATC 5 cut(s) 80, 193, 199, 254, 261
LpnPI CCDG 2 cut(s) 77, 229
Lsp1109I GCAGC 1 cut(s) 192
MaeIII GTNAC 1 cut(s) 110
MalI GATC 5 cut(s) 82, 195, 201, 256, 263
MboI GATC 5 cut(s) 80, 193, 199, 254, 261
MboII GAAGA 3 cut(s) 88, 179, 245
MflI RGATCY 2 cut(s) 254, 261
MhlI GDGCHC 1 cut(s) 221
MlyI GAGTC 1 cut(s) 127
MmeI TCCRAC 4 cut(s) 30, 120, 138, 149
MnlI CCTC 1 cut(s) 163
MwoI GCNNNNNNNGC 2 cut(s) 189, 216
NdeII GATC 5 cut(s) 80, 193, 199, 254, 261
PcsI WCGNNNNNNNCGW 1 cut(s) 66
PfeI GAWTC 1 cut(s) 248
PflFI GACNNNGTC 1 cut(s) 136
PkrI GCNGC 1 cut(s) 182
Ple19I CGATCG 1 cut(s) 202
PleI GAGTC 1 cut(s) 127
PpsI GAGTC 1 cut(s) 127
Psp124BI GAGCTC 1 cut(s) 221
PspPI GGNCC 2 cut(s) 122, 172
PsuI RGATCY 2 cut(s) 254, 261
PsyI GACNNNGTC 1 cut(s) 136
PvuI CGATCG 1 cut(s) 202
RsaI GTAC 3 cut(s) 59, 89, 149
RsaNI GTAC 3 cut(s) 58, 88, 148
SacI GAGCTC 1 cut(s) 221
SatI GCNGC 1 cut(s) 181
Sau3AI GATC 5 cut(s) 80, 193, 199, 254, 261
Sau96I GGNCC 2 cut(s) 122, 172
SchI GAGTC 1 cut(s) 127
SduI GDGCHC 1 cut(s) 221
SetI ASST 3 cut(s) 124, 174, 221
SfcI CTRYAG 2 cut(s) 205, 241
SinI GGWCC 2 cut(s) 122, 172
SsiI CCGC 1 cut(s) 21
SstI GAGCTC 1 cut(s) 221
TaaI ACNGT 1 cut(s) 110
TaqI TCGA 1 cut(s) 251
TfiI GAWTC 1 cut(s) 248
TseI GCWGC 1 cut(s) 180
TspDTI ATGAA 1 cut(s) 88
Tth111I GACNNNGTC 1 cut(s) 136
VpaK11BI GGWCC 2 cut(s) 122, 172
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.