Rh7BG089600

Protein of unknown function (DUF632)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0007560
Physical Location & Seq
Forward (+)
6640914 .. 6641102
189 bp
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UTR
Exon/CDS
Intron
Rh7BG089600.1

Sequence Viewer

Length: 189 bp
ATGAAAGACGTCGTCTTCGCCCGCCACCACCTCGCCGCCGCTCACGCCGACTACTGCCGCTCCCTCCGCCTCACTAGCTCCGCCCTCGTGTCCCTCTCCATCTCCGACACCAGCCCCTCCTCTACTCCCCAGAGCCAGAACTCGAACTTCACCGGCGGCGGATTTCCGACGGCCTTTCAGGCGAACTAG

Protein Analysis

62

Amino Acids

6.56

Weight (kDa)

8.02

Isoelectric Point (pI)

50.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF630 PF04783 1 - 30 1.3e-07 Protein of unknown function (DUF630)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 12
AccBSI CCGCTC 2 cut(s) 41, 60
AciI CCGC 8 cut(s) 22, 36, 39, 58, 67, 81, 156, 159
AcyI GRCGYC 1 cut(s) 9
AluBI AGCT 1 cut(s) 78
AluI AGCT 1 cut(s) 78
AoxI GGCC 1 cut(s) 171
ArsI GACNNNNNNTTYG 1 cut(s) 31
AsuHPI GGTGA 1 cut(s) 142
BauI CACGAG 1 cut(s) 86
BbsI GAAGAC 1 cut(s) 7
BccI CCATC 1 cut(s) 107
BceAI ACGGC 1 cut(s) 186
BfaI CTAG 2 cut(s) 75, 187
BglI GCCNNNNNGGC 1 cut(s) 179
BisI GCNGC 4 cut(s) 36, 39, 58, 157
BlsI GCNGC 4 cut(s) 37, 40, 59, 158
BpiI GAAGAC 1 cut(s) 7
BsaHI GRCGYC 1 cut(s) 9
BsaXI ACNNNNNCTCC 2 cut(s) 44, 74
Bse118I RCCGGY 1 cut(s) 152
BseRI GAGGAG 1 cut(s) 109
BshFI GGCC 1 cut(s) 173
BsiSI CCGG 1 cut(s) 153
BslFI GGGAC 1 cut(s) 76
BsmFI GGGAC 1 cut(s) 76
BsnI GGCC 1 cut(s) 173
BspACI CCGC 8 cut(s) 22, 36, 39, 58, 67, 81, 156, 159
BspANI GGCC 1 cut(s) 173
BsrBI CCGCTC 2 cut(s) 41, 60
BsrFI RCCGGY 1 cut(s) 152
BssAI RCCGGY 1 cut(s) 152
BssNI GRCGYC 1 cut(s) 9
BssSI CACGAG 1 cut(s) 86
Bst2BI CACGAG 1 cut(s) 86
BstACI GRCGYC 1 cut(s) 9
BstC8I GCNNGC 1 cut(s) 22
BstMWI GCNNNNNNNGC 4 cut(s) 44, 66, 75, 179
BstV2I GAAGAC 1 cut(s) 7
BsuRI GGCC 1 cut(s) 173
Cac8I GCNNGC 1 cut(s) 22
Cfr10I RCCGGY 1 cut(s) 152
CviJI RGCY 4 cut(s) 78, 114, 135, 173
CviKI_1 RGCY 4 cut(s) 78, 114, 135, 173
EciI GGCGGA 3 cut(s) 56, 70, 174
FaqI GGGAC 1 cut(s) 76
FauI CCCGC 1 cut(s) 29
Fnu4HI GCNGC 4 cut(s) 36, 39, 58, 157
Fsp4HI GCNGC 4 cut(s) 36, 39, 58, 157
FspBI CTAG 2 cut(s) 75, 187
GluI GCNGC 4 cut(s) 36, 39, 58, 157
HaeIII GGCC 1 cut(s) 173
HapII CCGG 1 cut(s) 153
Hin1I GRCGYC 1 cut(s) 9
HpaII CCGG 1 cut(s) 153
HphI GGTGA 1 cut(s) 142
Hpy188I TCNGA 2 cut(s) 106, 168
Hpy99I CGWCG 2 cut(s) 14, 172
HpyCH4IV ACGT 1 cut(s) 9
HpyF10VI GCNNNNNNNGC 4 cut(s) 44, 66, 75, 179
HpySE526I ACGT 1 cut(s) 9
Hsp92I GRCGYC 1 cut(s) 9
LmnI GCTCC 2 cut(s) 65, 83
LpnPI CCDG 5 cut(s) 124, 143, 149, 164, 166
MaeI CTAG 2 cut(s) 75, 187
MaeII ACGT 1 cut(s) 9
MbiI CCGCTC 2 cut(s) 41, 60
MboII GAAGA 1 cut(s) 7
MmeI TCCRAC 1 cut(s) 129
MnlI CCTC 7 cut(s) 41, 74, 80, 95, 104, 127, 130
MspI CCGG 1 cut(s) 153
MwoI GCNNNNNNNGC 4 cut(s) 44, 66, 75, 179
PflFI GACNNNGTC 1 cut(s) 11
PkrI GCNGC 4 cut(s) 37, 40, 59, 158
PsyI GACNNNGTC 1 cut(s) 11
SatI GCNGC 4 cut(s) 36, 39, 58, 157
SetI ASST 3 cut(s) 12, 33, 80
SgrAI CRCCGGYG 1 cut(s) 152
SsiI CCGC 8 cut(s) 22, 36, 39, 58, 67, 81, 156, 159
SspMI CTAG 2 cut(s) 75, 187
TaiI ACGT 1 cut(s) 12
TaqI TCGA 1 cut(s) 143
TauI GCSGC 4 cut(s) 38, 41, 60, 159
TspDTI ATGAA 1 cut(s) 17
Tth111I GACNNNGTC 1 cut(s) 11
XspI CTAG 2 cut(s) 75, 187
ZraI GACGTC 1 cut(s) 10
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.