splicing factor 3A subunit
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g43341 FvH4_3g43342 |
| rosa_chinensis | RchiOBHm_Chr3g0497221 |
| rosa_laevigata | RLG00000022469 |
| rosa_multiflora | Rmu_sc0000869.1_g000018 |
| rosa_roxburghii | Rroxscaffold_4G00331510 Rroxscaffold_6G00388250 Rroxscaffold_6G00421640 |
| rosa_rugosa | Rorug01G0131600.1 Rorug03G0292000 Rorug04G0439100 Rorug07G0306600 |
| rosa_samantha | Rh1AG309600 Rh1BG121000 Rh1BG422000 Rh1CG290300 Rh1DG454700 Rh2AG238100 Rh2CG303800 Rh2CG398500 Rh2DG245600 Rh2DG339900 Rh3BG373300 Rh3CG152000 Rh3DG153000 Rh4BG233100 Rh6DG139100 Rh6DG164400 Rh7AG422700 |
| rosa_wichuraiana | Rw1G027500 Rw3G029480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 75 |
| AclI | AACGTT | 1 cut(s) | 24 |
| AhlI | ACTAGT | 1 cut(s) | 142 |
| AluBI | AGCT | 1 cut(s) | 133 |
| AluI | AGCT | 1 cut(s) | 133 |
| Alw26I | GTCTC | 1 cut(s) | 117 |
| ApeKI | GCWGC | 1 cut(s) | 133 |
| BbvI | GCAGC | 1 cut(s) | 120 |
| BcoDI | GTCTC | 1 cut(s) | 117 |
| BcuI | ACTAGT | 1 cut(s) | 142 |
| BfaI | CTAG | 1 cut(s) | 143 |
| BisI | GCNGC | 2 cut(s) | 76, 134 |
| BlsI | GCNGC | 2 cut(s) | 77, 135 |
| BmiI | GGNNCC | 1 cut(s) | 189 |
| BmsI | GCATC | 1 cut(s) | 142 |
| BpuEI | CTTGAG | 1 cut(s) | 177 |
| Bsa29I | ATCGAT | 1 cut(s) | 92 |
| BseCI | ATCGAT | 1 cut(s) | 92 |
| BseGI | GGATG | 1 cut(s) | 126 |
| BseMII | CTCAG | 1 cut(s) | 100 |
| BseXI | GCAGC | 1 cut(s) | 120 |
| BsgI | GTGCAG | 1 cut(s) | 119 |
| BshVI | ATCGAT | 1 cut(s) | 92 |
| BsmAI | GTCTC | 1 cut(s) | 117 |
| Bsp143I | GATC | 1 cut(s) | 89 |
| BspACI | CCGC | 1 cut(s) | 75 |
| BspCNI | CTCAG | 1 cut(s) | 99 |
| BspDI | ATCGAT | 1 cut(s) | 92 |
| BspLI | GGNNCC | 1 cut(s) | 189 |
| BssMI | GATC | 1 cut(s) | 89 |
| BstC8I | GCNNGC | 3 cut(s) | 55, 59, 138 |
| BstDEI | CTNAG | 1 cut(s) | 86 |
| BstF5I | GGATG | 1 cut(s) | 126 |
| BstKTI | GATC | 1 cut(s) | 92 |
| BstMAI | GTCTC | 1 cut(s) | 117 |
| BstMBI | GATC | 1 cut(s) | 89 |
| BstNSI | RCATGY | 1 cut(s) | 57 |
| BstV1I | GCAGC | 1 cut(s) | 120 |
| Bsu15I | ATCGAT | 1 cut(s) | 92 |
| BsuTUI | ATCGAT | 1 cut(s) | 92 |
| BtsCI | GGATG | 1 cut(s) | 126 |
| BtsI | GCAGTG | 1 cut(s) | 173 |
| BtsIMutI | CAGTG | 1 cut(s) | 173 |
| Cac8I | GCNNGC | 3 cut(s) | 55, 59, 138 |
| ClaI | ATCGAT | 1 cut(s) | 92 |
| CviAII | CATG | 3 cut(s) | 54, 109, 167 |
| CviJI | RGCY | 3 cut(s) | 78, 133, 190 |
| CviKI_1 | RGCY | 3 cut(s) | 78, 133, 190 |
| DdeI | CTNAG | 1 cut(s) | 86 |
| DpnI | GATC | 1 cut(s) | 91 |
| DpnII | GATC | 1 cut(s) | 89 |
| EcoT22I | ATGCAT | 1 cut(s) | 55 |
| FaeI | CATG | 3 cut(s) | 57, 112, 170 |
| FaiI | YATR | 7 cut(s) | 34, 36, 55, 104, 110, 119, 168 |
| FatI | CATG | 3 cut(s) | 53, 108, 166 |
| Fnu4HI | GCNGC | 2 cut(s) | 76, 134 |
| FokI | GGATG | 1 cut(s) | 113 |
| Fsp4HI | GCNGC | 2 cut(s) | 76, 134 |
| FspBI | CTAG | 1 cut(s) | 143 |
| GluI | GCNGC | 2 cut(s) | 76, 134 |
| Hin1II | CATG | 3 cut(s) | 57, 112, 170 |
| HinfI | GANTC | 2 cut(s) | 202, 210 |
| Hpy188I | TCNGA | 1 cut(s) | 89 |
| Hpy188III | TCNNGA | 1 cut(s) | 214 |
| HpyCH4IV | ACGT | 1 cut(s) | 24 |
| HpyCH4V | TGCA | 3 cut(s) | 20, 53, 136 |
| HpyF3I | CTNAG | 1 cut(s) | 86 |
| HpySE526I | ACGT | 1 cut(s) | 24 |
| Hsp92II | CATG | 3 cut(s) | 57, 112, 170 |
| Kzo9I | GATC | 1 cut(s) | 89 |
| LmnI | GCTCC | 1 cut(s) | 187 |
| LpnPI | CCDG | 2 cut(s) | 143, 170 |
| Lsp1109I | GCAGC | 1 cut(s) | 120 |
| LweI | GCATC | 1 cut(s) | 142 |
| MaeI | CTAG | 1 cut(s) | 143 |
| MaeII | ACGT | 1 cut(s) | 24 |
| MalI | GATC | 1 cut(s) | 91 |
| MboI | GATC | 1 cut(s) | 89 |
| MlyI | GAGTC | 1 cut(s) | 211 |
| MnlI | CCTC | 3 cut(s) | 31, 154, 201 |
| Mph1103I | ATGCAT | 1 cut(s) | 55 |
| MspA1I | CMGCKG | 1 cut(s) | 133 |
| NdeII | GATC | 1 cut(s) | 89 |
| NlaIII | CATG | 3 cut(s) | 57, 112, 170 |
| NlaIV | GGNNCC | 1 cut(s) | 189 |
| NsiI | ATGCAT | 1 cut(s) | 55 |
| NspI | RCATGY | 1 cut(s) | 57 |
| PaeI | GCATGC | 1 cut(s) | 57 |
| PfeI | GAWTC | 1 cut(s) | 210 |
| PkrI | GCNGC | 2 cut(s) | 77, 135 |
| PleI | GAGTC | 1 cut(s) | 210 |
| PpsI | GAGTC | 1 cut(s) | 210 |
| Psp1406I | AACGTT | 1 cut(s) | 24 |
| PspN4I | GGNNCC | 1 cut(s) | 189 |
| PvuII | CAGCTG | 1 cut(s) | 133 |
| SatI | GCNGC | 2 cut(s) | 76, 134 |
| Sau3AI | GATC | 1 cut(s) | 89 |
| SchI | GAGTC | 1 cut(s) | 211 |
| SetI | ASST | 2 cut(s) | 27, 135 |
| SfaNI | GCATC | 1 cut(s) | 142 |
| SmlI | CTYRAG | 1 cut(s) | 192 |
| SmoI | CTYRAG | 1 cut(s) | 192 |
| SpeI | ACTAGT | 1 cut(s) | 142 |
| SphI | GCATGC | 1 cut(s) | 57 |
| SsiI | CCGC | 1 cut(s) | 75 |
| SspMI | CTAG | 1 cut(s) | 143 |
| TaiI | ACGT | 1 cut(s) | 27 |
| TaqI | TCGA | 2 cut(s) | 92, 208 |
| TauI | GCSGC | 1 cut(s) | 78 |
| TfiI | GAWTC | 1 cut(s) | 210 |
| TscAI | CASTG | 1 cut(s) | 180 |
| TseI | GCWGC | 1 cut(s) | 133 |
| TspDTI | ATGAA | 1 cut(s) | 183 |
| TspRI | CASTG | 1 cut(s) | 180 |
| XceI | RCATGY | 1 cut(s) | 57 |
| XspI | CTAG | 1 cut(s) | 143 |
| Zsp2I | ATGCAT | 1 cut(s) | 55 |