No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g20001 FvH4_3g30421 FvH4_3g37282 FvH4_4g08763 FvH4_5g33112 FvH4_6g34810 |
| rosa_chinensis | RchiOBHm_Chr1g0321691 RchiOBHm_Chr2g0141281 |
| rosa_laevigata | RLG00000030445 |
| rosa_multiflora | Rmu_sc0001551.1_g000012 Rmu_sc0003593.1_g000002 Rmu_sc0005979.1_g000021 Rmu_sc0006601.1_g000004 Rmu_sc0014259.1_g000015 Rmu_sc0014573.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00109690 Rroxscaffold_3G00218070 Rroxscaffold_4G00305750 |
| rosa_rugosa | Rorug05G0498400 |
| rosa_samantha | Rh1DG124100 Rh2AG243500 Rh2DG252000 Rh4CG084100 Rh6AG070400 Rh6BG224300 Rh6CG309200 Rh6DG293000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 3 cut(s) | 130, 179, 192 |
| AgsI | TTSAA | 2 cut(s) | 44, 127 |
| AhlI | ACTAGT | 1 cut(s) | 8 |
| AlwI | GGATC | 3 cut(s) | 130, 179, 192 |
| Ama87I | CYCGRG | 1 cut(s) | 211 |
| AoxI | GGCC | 1 cut(s) | 94 |
| AspS9I | GGNCC | 2 cut(s) | 95, 215 |
| AvaI | CYCGRG | 1 cut(s) | 211 |
| AvaII | GGWCC | 1 cut(s) | 215 |
| BamHI | GGATCC | 1 cut(s) | 184 |
| BceAI | ACGGC | 1 cut(s) | 42 |
| BcuI | ACTAGT | 1 cut(s) | 8 |
| BfaI | CTAG | 2 cut(s) | 9, 111 |
| Bme18I | GGWCC | 1 cut(s) | 215 |
| BmeT110I | CYCGRG | 1 cut(s) | 211 |
| BmgT120I | GGNCC | 2 cut(s) | 95, 215 |
| BmiI | GGNNCC | 2 cut(s) | 186, 216 |
| BmsI | GCATC | 1 cut(s) | 165 |
| BsaBI | GATNNNNATC | 1 cut(s) | 189 |
| Bse1I | ACTGG | 2 cut(s) | 121, 154 |
| Bse3DI | GCAATG | 1 cut(s) | 74 |
| Bse8I | GATNNNNATC | 1 cut(s) | 189 |
| BseJI | GATNNNNATC | 1 cut(s) | 189 |
| BseMI | GCAATG | 1 cut(s) | 74 |
| BseNI | ACTGG | 2 cut(s) | 121, 154 |
| BseYI | CCCAGC | 1 cut(s) | 86 |
| BshFI | GGCC | 1 cut(s) | 96 |
| BsiHKCI | CYCGRG | 1 cut(s) | 211 |
| BslFI | GGGAC | 1 cut(s) | 142 |
| BsmFI | GGGAC | 1 cut(s) | 142 |
| BsnI | GGCC | 1 cut(s) | 96 |
| BsoBI | CYCGRG | 1 cut(s) | 211 |
| Bsp143I | GATC | 2 cut(s) | 135, 184 |
| BspANI | GGCC | 1 cut(s) | 96 |
| BspLI | GGNNCC | 2 cut(s) | 186, 216 |
| BspPI | GGATC | 3 cut(s) | 130, 179, 192 |
| BsrDI | GCAATG | 1 cut(s) | 74 |
| BsrI | ACTGG | 2 cut(s) | 121, 154 |
| BssMI | GATC | 2 cut(s) | 135, 184 |
| BstKTI | GATC | 2 cut(s) | 138, 187 |
| BstMBI | GATC | 2 cut(s) | 135, 184 |
| BstX2I | RGATCY | 2 cut(s) | 135, 184 |
| BstYI | RGATCY | 2 cut(s) | 135, 184 |
| BsuRI | GGCC | 1 cut(s) | 96 |
| BtsIMutI | CAGTG | 1 cut(s) | 114 |
| Cfr13I | GGNCC | 2 cut(s) | 95, 215 |
| CviJI | RGCY | 4 cut(s) | 29, 96, 164, 227 |
| CviKI_1 | RGCY | 4 cut(s) | 29, 96, 164, 227 |
| DpnI | GATC | 2 cut(s) | 137, 186 |
| DpnII | GATC | 2 cut(s) | 135, 184 |
| Eco47I | GGWCC | 1 cut(s) | 215 |
| Eco88I | CYCGRG | 1 cut(s) | 211 |
| EcoO109I | RGGNCCY | 1 cut(s) | 215 |
| FaiI | YATR | 4 cut(s) | 32, 38, 84, 222 |
| FaqI | GGGAC | 1 cut(s) | 142 |
| FspBI | CTAG | 2 cut(s) | 9, 111 |
| GsaI | CCCAGC | 1 cut(s) | 90 |
| HaeIII | GGCC | 1 cut(s) | 96 |
| Hpy188I | TCNGA | 2 cut(s) | 135, 174 |
| Hpy188III | TCNNGA | 1 cut(s) | 199 |
| HpyCH4IV | ACGT | 1 cut(s) | 46 |
| HpyCH4V | TGCA | 2 cut(s) | 79, 178 |
| HpySE526I | ACGT | 1 cut(s) | 46 |
| Kzo9I | GATC | 2 cut(s) | 135, 184 |
| LpnPI | CCDG | 3 cut(s) | 72, 102, 167 |
| LweI | GCATC | 1 cut(s) | 165 |
| MaeI | CTAG | 2 cut(s) | 9, 111 |
| MaeII | ACGT | 1 cut(s) | 46 |
| MaeIII | GTNAC | 1 cut(s) | 4 |
| MalI | GATC | 2 cut(s) | 137, 186 |
| MboI | GATC | 2 cut(s) | 135, 184 |
| MflI | RGATCY | 2 cut(s) | 135, 184 |
| MnlI | CCTC | 3 cut(s) | 108, 175, 217 |
| NdeII | GATC | 2 cut(s) | 135, 184 |
| NlaIV | GGNNCC | 2 cut(s) | 186, 216 |
| PpuMI | RGGWCCY | 1 cut(s) | 215 |
| Psp5II | RGGWCCY | 1 cut(s) | 215 |
| PspFI | CCCAGC | 1 cut(s) | 86 |
| PspN4I | GGNNCC | 2 cut(s) | 186, 216 |
| PspPI | GGNCC | 2 cut(s) | 95, 215 |
| PspPPI | RGGWCCY | 1 cut(s) | 215 |
| PsuI | RGATCY | 2 cut(s) | 135, 184 |
| Sau3AI | GATC | 2 cut(s) | 135, 184 |
| Sau96I | GGNCC | 2 cut(s) | 95, 215 |
| SetI | ASST | 1 cut(s) | 49 |
| SfaNI | GCATC | 1 cut(s) | 165 |
| SinI | GGWCC | 1 cut(s) | 215 |
| SpeI | ACTAGT | 1 cut(s) | 8 |
| SspMI | CTAG | 2 cut(s) | 9, 111 |
| TaiI | ACGT | 1 cut(s) | 49 |
| TscAI | CASTG | 1 cut(s) | 121 |
| TspRI | CASTG | 1 cut(s) | 121 |
| VpaK11BI | GGWCC | 1 cut(s) | 215 |
| XspI | CTAG | 2 cut(s) | 9, 111 |