Rh6DG383500

Ribonuclease P protein subunit p25-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
Physical Location & Seq
Reverse (-)
57662767 .. 57663757
991 bp
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UTR
Exon/CDS
Intron
Rh6DG383500.1

Sequence Viewer

Length: 162 bp
ATGGATTGGTACCAGAGAGTGGAGAAGCCAAGAGCAGAGACGCCAATTGATGAGAATGAGATTAGGATTACGAGCCAAGGGAGGATGCGAAACTACATCACTTACGCCATGACTCTGCTTCAGAAATCAAATCTACAAATGATACAAGCAGAGACCAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

53

Amino Acids

6.38

Weight (kDa)

6.13

Isoelectric Point (pI)

28.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 9
AccB1I GGYRCC 1 cut(s) 9
AccB7I CCANNNNNTGG 1 cut(s) 19
AcuI CTGAAG 1 cut(s) 104
AcyI GRCGYC 1 cut(s) 41
AfaI GTAC 1 cut(s) 11
AfiI CCNNNNNNNGG 1 cut(s) 19
Alw26I GTCTC 2 cut(s) 32, 146
Asp718I GGTACC 1 cut(s) 9
BanI GGYRCC 1 cut(s) 9
BcoDI GTCTC 2 cut(s) 32, 146
BmiI GGNNCC 1 cut(s) 11
BmsI GCATC 1 cut(s) 75
BsaHI GRCGYC 1 cut(s) 41
BsaI GGTCTC 1 cut(s) 146
BsaJI CCNNGG 1 cut(s) 76
Bsc4I CCNNNNNNNGG 1 cut(s) 19
BseDI CCNNGG 1 cut(s) 76
BseGI GGATG 1 cut(s) 90
BseLI CCNNNNNNNGG 1 cut(s) 19
BshNI GGYRCC 1 cut(s) 9
BslI CCNNNNNNNGG 1 cut(s) 19
BsmAI GTCTC 2 cut(s) 32, 146
BsmBI CGTCTC 1 cut(s) 32
Bso31I GGTCTC 1 cut(s) 146
BspLI GGNNCC 1 cut(s) 11
BspT107I GGYRCC 1 cut(s) 9
BspTNI GGTCTC 1 cut(s) 146
BssECI CCNNGG 1 cut(s) 76
BssNI GRCGYC 1 cut(s) 41
BssT1I CCWWGG 1 cut(s) 76
BstACI GRCGYC 1 cut(s) 41
BstF5I GGATG 1 cut(s) 90
BstMAI GTCTC 2 cut(s) 32, 146
BtsCI GGATG 1 cut(s) 90
CseI GACGC 1 cut(s) 49
Csp6I GTAC 1 cut(s) 10
CviAII CATG 1 cut(s) 109
CviJI RGCY 2 cut(s) 28, 75
CviKI_1 RGCY 2 cut(s) 28, 75
CviQI GTAC 1 cut(s) 10
Eco130I CCWWGG 1 cut(s) 76
Eco31I GGTCTC 1 cut(s) 146
Eco57I CTGAAG 1 cut(s) 104
EcoT14I CCWWGG 1 cut(s) 76
ErhI CCWWGG 1 cut(s) 76
Esp3I CGTCTC 1 cut(s) 32
FaeI CATG 1 cut(s) 112
FaiI YATR 1 cut(s) 110
FatI CATG 1 cut(s) 108
FokI GGATG 1 cut(s) 97
HgaI GACGC 1 cut(s) 49
Hin1I GRCGYC 1 cut(s) 41
Hin1II CATG 1 cut(s) 112
HinfI GANTC 1 cut(s) 112
Hpy188I TCNGA 1 cut(s) 123
Hsp92I GRCGYC 1 cut(s) 41
Hsp92II CATG 1 cut(s) 112
KpnI GGTACC 1 cut(s) 13
LpnPI CCDG 1 cut(s) 26
LweI GCATC 1 cut(s) 75
MfeI CAATTG 1 cut(s) 45
MluCI AATT 1 cut(s) 45
MlyI GAGTC 1 cut(s) 106
MnlI CCTC 1 cut(s) 75
MunI CAATTG 1 cut(s) 45
NlaIII CATG 1 cut(s) 112
NlaIV GGNNCC 1 cut(s) 11
PflMI CCANNNNNTGG 1 cut(s) 19
PleI GAGTC 1 cut(s) 106
PpsI GAGTC 1 cut(s) 106
PspN4I GGNNCC 1 cut(s) 11
RsaI GTAC 1 cut(s) 11
RsaNI GTAC 1 cut(s) 10
SchI GAGTC 1 cut(s) 106
SfaNI GCATC 1 cut(s) 75
SgeI CNNG 6 cut(s) 25, 42, 84, 89, 121, 158
Sse9I AATT 1 cut(s) 45
StyI CCWWGG 1 cut(s) 76
TasI AATT 1 cut(s) 45
Van91I CCANNNNNTGG 1 cut(s) 19
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.