Rh7CG432700

vinorine synthase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0007556
Physical Location & Seq
Reverse (-)
56603546 .. 56604643
1098 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG432700.1

Sequence Viewer

Length: 732 bp
ATGGAGAGCACGTGGTTCGAGGAAAAGAAGTATGTTACAAGGAGATTTGTGTTTGATGCTAAAGCCATAGCCACATTACGTGAGAAAGCAAAGAGCGACCTTGTGCCCAATCCAACTCGTGTTGAGACACTCACTTGTTTTCTTTGGAAACATGCAACATTTGCTTCTAGACACGGTGGTACATCACGAAGAGCATCCGTAGTAGCACATGCAGTGAACTTGAGGCGGCGACTGAAGCCACCAATGCCAGATGACGCCATTGGAAATCTATTTTGGTGGGCTACTGCAGTCTACAACACTACTGATAAGGCAGAGACTACTGATGAGTTGTGTGATTTGTTGAAGATGTTACATGAATCTCTCAATGGGCTTGACCATGATCATTTTTTGGATACATTGCGCGGAGAAGAGGGACGTCGAGCCATTTTTGAATACCTCGATCAATTGTTGGAGGGCATGGATTCCTTAGATCCAACACCAGAAATTTATGCGTTCACTAGCTGGATTAATATTCTCGATGAAGTTGATTTTGGATGGGGAAAGCCATTTTGGATTGGGGTCATGGGAAAAGTTGGACCTGCCTTTAGGAACCTCACTGTGTTCGTCAAAACACAAAGGGATAACGGCATTGAAGCATGGGTGACCATGGATGAAAAGCAAATGTCTATAATGGAAAAAGATCCTCAATTTTTAGCATTTGCTTCTCCAAACCCGCGCATTTTAAATGTATGA

Protein Analysis

243

Amino Acids

27.93

Weight (kDa)

5.73

Isoelectric Point (pI)

41.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 7 - 230 9.5e-32 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 418
Acc36I ACCTGC 1 cut(s) 586
AccI GTMKAC 1 cut(s) 291
AccII CGCG 2 cut(s) 402, 715
AciI CCGC 3 cut(s) 226, 402, 713
AclWI GGATC 2 cut(s) 464, 674
AcsI RAATTY 1 cut(s) 483
AcuI CTGAAG 1 cut(s) 254
AcvI CACGTG 1 cut(s) 12
AcyI GRCGYC 2 cut(s) 255, 415
AfaI GTAC 1 cut(s) 181
AgsI TTSAA 3 cut(s) 343, 431, 632
AjuI GAANNNNNNNTTGG 6 cut(s) 256, 288, 513, 532, 545, 564
AluBI AGCT 1 cut(s) 501
AluI AGCT 1 cut(s) 501
Alw21I GWGCWC 1 cut(s) 11
Alw26I GTCTC 2 cut(s) 119, 308
AlwI GGATC 2 cut(s) 464, 674
ApoI RAATTY 1 cut(s) 483
AseI ATTAAT 1 cut(s) 507
AspLEI GCGC 2 cut(s) 402, 717
AspS9I GGNCC 1 cut(s) 575
AsuHPI GGTGA 1 cut(s) 652
AvaII GGWCC 1 cut(s) 575
BaeGI GKGCMC 1 cut(s) 108
BauI CACGAG 1 cut(s) 117
BbrPI CACGTG 1 cut(s) 12
Bbv12I GWGCWC 1 cut(s) 11
BccI CCATC 1 cut(s) 528
BceAI ACGGC 1 cut(s) 640
BcgI CGANNNNNNTGC 1 cut(s) 32
BciVI GTATCC 1 cut(s) 385
BclI TGATCA 1 cut(s) 379
BcoDI GTCTC 2 cut(s) 119, 308
BfaI CTAG 2 cut(s) 168, 498
BfmI CTRYAG 1 cut(s) 285
BfuAI ACCTGC 1 cut(s) 586
BfuI GTATCC 1 cut(s) 385
BisI GCNGC 1 cut(s) 227
BlsI GCNGC 1 cut(s) 228
Bme18I GGWCC 1 cut(s) 575
BmgT120I GGNCC 1 cut(s) 575
BmiI GGNNCC 1 cut(s) 590
BmsI GCATC 2 cut(s) 46, 203
BpuEI CTTGAG 1 cut(s) 241
BsaAI YACGTR 2 cut(s) 12, 80
BsaHI GRCGYC 2 cut(s) 255, 415
BsaJI CCNNGG 1 cut(s) 645
BsaXI ACNNNNNCTCC 1 cut(s) 26
Bse3DI GCAATG 1 cut(s) 395
BseDI CCNNGG 1 cut(s) 645
BseGI GGATG 3 cut(s) 194, 539, 655
BseMI GCAATG 1 cut(s) 395
BseSI GKGCMC 1 cut(s) 108
Bsh1236I CGCG 2 cut(s) 402, 715
BsiHKAI GWGCWC 1 cut(s) 11
BslFI GGGAC 1 cut(s) 426
BsmAI GTCTC 2 cut(s) 119, 308
BsmFI GGGAC 1 cut(s) 426
Bsp1286I GDGCHC 2 cut(s) 11, 108
Bsp143I GATC 4 cut(s) 379, 439, 469, 679
Bsp19I CCATGG 1 cut(s) 645
BspACI CCGC 3 cut(s) 226, 402, 713
BspFNI CGCG 2 cut(s) 402, 715
BspLI GGNNCC 1 cut(s) 590
BspMAI CTGCAG 1 cut(s) 289
BspMI ACCTGC 1 cut(s) 586
BspPI GGATC 2 cut(s) 464, 674
BspQI GCTCTTC 1 cut(s) 184
BsrDI GCAATG 1 cut(s) 395
BssECI CCNNGG 1 cut(s) 645
BssMI GATC 4 cut(s) 379, 439, 469, 679
BssNI GRCGYC 2 cut(s) 255, 415
BssSI CACGAG 1 cut(s) 117
BssT1I CCWWGG 1 cut(s) 645
Bst2BI CACGAG 1 cut(s) 117
Bst4CI ACNGT 2 cut(s) 176, 598
Bst6I CTCTTC 2 cut(s) 184, 402
BstACI GRCGYC 2 cut(s) 255, 415
BstAPI GCANNNNNTGC 1 cut(s) 161
BstBAI YACGTR 2 cut(s) 12, 80
BstDEI CTNAG 1 cut(s) 466
BstDSI CCRYGG 1 cut(s) 645
BstEII GGTNACC 1 cut(s) 640
BstF5I GGATG 3 cut(s) 194, 539, 655
BstFNI CGCG 2 cut(s) 402, 715
BstHHI GCGC 2 cut(s) 402, 717
BstKTI GATC 4 cut(s) 382, 442, 472, 682
BstMAI GTCTC 2 cut(s) 119, 308
BstMBI GATC 4 cut(s) 379, 439, 469, 679
BstMWI GCNNNNNNNGC 3 cut(s) 161, 235, 244
BstNSI RCATGY 2 cut(s) 155, 212
BstPI GGTNACC 1 cut(s) 640
BstSFI CTRYAG 1 cut(s) 285
BstSLI GKGCMC 1 cut(s) 108
BstUI CGCG 2 cut(s) 402, 715
BstX2I RGATCY 2 cut(s) 469, 679
BstYI RGATCY 2 cut(s) 469, 679
BsuI GTATCC 1 cut(s) 385
BtgI CCRYGG 1 cut(s) 645
BtsCI GGATG 3 cut(s) 194, 539, 655
BtsI GCAGTG 1 cut(s) 219
BtsIMutI CAGTG 2 cut(s) 219, 594
BveI ACCTGC 1 cut(s) 586
CfoI GCGC 2 cut(s) 402, 717
Cfr13I GGNCC 1 cut(s) 575
CseI GACGC 1 cut(s) 263
Csp6I GTAC 1 cut(s) 180
CviAII CATG 8 cut(s) 152, 209, 353, 377, 457, 562, 636, 646
CviJI RGCY 8 cut(s) 65, 71, 238, 281, 370, 422, 501, 544
CviKI_1 RGCY 8 cut(s) 65, 71, 238, 281, 370, 422, 501, 544
CviQI GTAC 1 cut(s) 180
DdeI CTNAG 1 cut(s) 466
DpnI GATC 4 cut(s) 381, 441, 471, 681
DpnII GATC 4 cut(s) 379, 439, 469, 679
DraI TTTAAA 1 cut(s) 723
Eam1104I CTCTTC 2 cut(s) 184, 402
EarI CTCTTC 2 cut(s) 184, 402
Eco130I CCWWGG 1 cut(s) 645
Eco47I GGWCC 1 cut(s) 575
Eco57I CTGAAG 1 cut(s) 254
Eco72I CACGTG 1 cut(s) 12
Eco91I GGTNACC 1 cut(s) 640
EcoO65I GGTNACC 1 cut(s) 640
EcoT14I CCWWGG 1 cut(s) 645
ErhI CCWWGG 1 cut(s) 645
FaeI CATG 8 cut(s) 155, 212, 356, 380, 460, 565, 639, 649
FaqI GGGAC 1 cut(s) 426
FatI CATG 8 cut(s) 151, 208, 352, 376, 456, 561, 635, 645
FauI CCCGC 1 cut(s) 720
FbaI TGATCA 1 cut(s) 379
FblI GTMKAC 1 cut(s) 291
Fnu4HI GCNGC 1 cut(s) 227
FokI GGATG 3 cut(s) 181, 546, 662
Fsp4HI GCNGC 1 cut(s) 227
FspBI CTAG 2 cut(s) 168, 498
GlaI GCGC 2 cut(s) 401, 716
GluI GCNGC 1 cut(s) 227
HgaI GACGC 1 cut(s) 263
HhaI GCGC 2 cut(s) 402, 717
Hin1I GRCGYC 2 cut(s) 255, 415
Hin1II CATG 8 cut(s) 155, 212, 356, 380, 460, 565, 639, 649
Hin6I GCGC 2 cut(s) 400, 715
HinP1I GCGC 2 cut(s) 400, 715
HinfI GANTC 2 cut(s) 356, 461
HphI GGTGA 1 cut(s) 652
Hpy166II GTNNAC 3 cut(s) 217, 292, 495
Hpy188III TCNNGA 3 cut(s) 168, 186, 515
Hpy8I GTNNAC 3 cut(s) 217, 292, 495
Hpy99I CGWCG 1 cut(s) 420
HpyCH4III ACNGT 2 cut(s) 176, 598
HpyCH4IV ACGT 3 cut(s) 11, 79, 415
HpyCH4V TGCA 3 cut(s) 155, 212, 287
HpyF10VI GCNNNNNNNGC 3 cut(s) 161, 235, 244
HpyF3I CTNAG 1 cut(s) 466
HpySE526I ACGT 3 cut(s) 11, 79, 415
Hsp92I GRCGYC 2 cut(s) 255, 415
Hsp92II CATG 8 cut(s) 155, 212, 356, 380, 460, 565, 639, 649
HspAI GCGC 2 cut(s) 400, 715
Ksp22I TGATCA 1 cut(s) 379
Kzo9I GATC 4 cut(s) 379, 439, 469, 679
LguI GCTCTTC 1 cut(s) 184
LpnPI CCDG 4 cut(s) 261, 487, 492, 591
LweI GCATC 2 cut(s) 46, 203
MaeI CTAG 2 cut(s) 168, 498
MaeII ACGT 3 cut(s) 11, 79, 415
MaeIII GTNAC 3 cut(s) 34, 348, 640
MalI GATC 4 cut(s) 381, 441, 471, 681
MboI GATC 4 cut(s) 379, 439, 469, 679
MboII GAAGA 3 cut(s) 201, 355, 419
MfeI CAATTG 1 cut(s) 443
MflI RGATCY 2 cut(s) 469, 679
MhlI GDGCHC 2 cut(s) 11, 108
MluCI AATT 3 cut(s) 443, 483, 686
MmeI TCCRAC 4 cut(s) 137, 429, 497, 553
MnlI CCTC 7 cut(s) 13, 216, 403, 445, 446, 602, 693
MseI TTAA 2 cut(s) 507, 722
MunI CAATTG 1 cut(s) 443
MvnI CGCG 2 cut(s) 402, 715
MwoI GCNNNNNNNGC 3 cut(s) 161, 235, 244
NcoI CCATGG 1 cut(s) 645
NdeII GATC 4 cut(s) 379, 439, 469, 679
NlaIII CATG 8 cut(s) 155, 212, 356, 380, 460, 565, 639, 649
NlaIV GGNNCC 1 cut(s) 590
NmuCI GTSAC 1 cut(s) 640
NspI RCATGY 2 cut(s) 155, 212
PciSI GCTCTTC 1 cut(s) 184
PfeI GAWTC 2 cut(s) 356, 461
PkrI GCNGC 1 cut(s) 228
PmaCI CACGTG 1 cut(s) 12
PmlI CACGTG 1 cut(s) 12
Ppu21I YACGTR 2 cut(s) 12, 80
PshBI ATTAAT 1 cut(s) 507
PspCI CACGTG 1 cut(s) 12
PspEI GGTNACC 1 cut(s) 640
PspN4I GGNNCC 1 cut(s) 590
PspPI GGNCC 1 cut(s) 575
PstI CTGCAG 1 cut(s) 289
PsuI RGATCY 2 cut(s) 469, 679
RsaI GTAC 1 cut(s) 181
RsaNI GTAC 1 cut(s) 180
SapI GCTCTTC 1 cut(s) 184
SaqAI TTAA 2 cut(s) 507, 722
SatI GCNGC 1 cut(s) 227
Sau3AI GATC 4 cut(s) 379, 439, 469, 679
Sau96I GGNCC 1 cut(s) 575
SduI GDGCHC 2 cut(s) 11, 108
SetI ASST 8 cut(s) 14, 82, 102, 418, 438, 503, 580, 594
SfaNI GCATC 2 cut(s) 46, 203
SfcI CTRYAG 1 cut(s) 285
SinI GGWCC 1 cut(s) 575
SmlI CTYRAG 1 cut(s) 220
SmoI CTYRAG 1 cut(s) 220
Sse9I AATT 3 cut(s) 443, 483, 686
SsiI CCGC 3 cut(s) 226, 402, 713
SspI AATATT 1 cut(s) 511
SspMI CTAG 2 cut(s) 168, 498
StyI CCWWGG 1 cut(s) 645
TaaI ACNGT 2 cut(s) 176, 598
TaiI ACGT 3 cut(s) 14, 82, 418
TaqI TCGA 4 cut(s) 18, 418, 438, 516
TasI AATT 3 cut(s) 443, 483, 686
TauI GCSGC 1 cut(s) 229
TfiI GAWTC 2 cut(s) 356, 461
Tru1I TTAA 2 cut(s) 507, 722
Tru9I TTAA 2 cut(s) 507, 722
TscAI CASTG 2 cut(s) 219, 601
TseFI GTSAC 1 cut(s) 640
Tsp45I GTSAC 1 cut(s) 640
TspDTI ATGAA 3 cut(s) 369, 534, 666
TspGWI ACGGA 1 cut(s) 187
TspRI CASTG 2 cut(s) 219, 601
VpaK11BI GGWCC 1 cut(s) 575
VspI ATTAAT 1 cut(s) 507
XapI RAATTY 1 cut(s) 483
XbaI TCTAGA 1 cut(s) 167
XceI RCATGY 2 cut(s) 155, 212
XmiI GTMKAC 1 cut(s) 291
XspI CTAG 2 cut(s) 168, 498
ZraI GACGTC 1 cut(s) 416
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.