Rh7CG501700

Phosphoglycerate mutase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0001245
Physical Location & Seq
Reverse (-)
67838041 .. 67841599
3559 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG501700.1

Sequence Viewer

Length: 1149 bp
ATGGCTACTGCTGTGTTTCACCAATCCATTGGAACTCACCAGTCCCATGGACATCTTTATAACTCTGGCATTCATCAAGAGTTGGGGAAAAGTTCAGTGAGATTGATTTCAAAGGCGTTCGAGGTTGATGTTGGACTGTCAAGAAGAGTATGCTACAACTCTGGTCAGAGAAACCTTGGTGTAATTCGAGCTTCGACTTCCCAAACTTCAGTGATTGATCATGTTTCGTCCCCCTCAAAGAACAAAGAAAGTGACTCACGAAAGAAATCTAATGAAGCCGCTTTGATTTTGATTAGGCATGGTGAATCATTGTGGAACGAAAAGAACTTGTTCACTGGCTGTGTTGATGTGCCGCTGAGCAAGAAGGGTGTAGAAGAGGCACTTGAAGCTGGCAAGAGAATCAGCAACATACCTGTCGACATGATCTATACATCTGCACTGATTCGTGCACAGATGACTGCCATGCTTGCCATGACACAGCACCGTCGTAAGAAGGTGCCAGTTATGTTGCATAATGAAAGCGAACAGGCTAGGGCATGGAGCCAGATTTTTAGTGAAGACACAAAATTGCAATCCATTCCTGTGGTCGCGGATTGGCGCTTGAATGAAAGAATGTATGGGGAATTACAGGGTCTCAATAAACAAGAAACAGCAGATAGATATGGGAAGGAACAAGTTCACGAGTGGCGTCGGAGTTATGATGTACCCCCTCCCAATGGCGATAGTTTGGAAATGTGTGCTGAAAGAGCTGTTGCTTATTTTAAAGATCAAATTGAACCCCAACTCTTATCTGGAAAGAACATTATGATTGCTGCCCACGGGAATTCATTGAGATCTATTATCATGTATCTGGATAAGCTAACTTCCCAAGAGGTTATTAGTTTAGAACTGTCAACTGGAATACCGATGCTTTACATTTTCAAAGAGGGAAAATTCACTCGGAGGGGAAGTCCTTCAGCACCTACTGAGGCTGGGGTTTATGCCTACACCAAGAAGTTGGCCCTTTACAGGCAGAAGTTAGATGAGATGCATTTGGTGTTTGAGAAAGCTTTGGCGGCAAAGGAAGAAGTCTGGGGAGAGTGGGAGTCAGGAAAGAGATTCCTTTCTGATGGAAGAAATTTGAGGAGAGGGGAGTCAAATTTGCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00010 ko00260 ko00680 ko01100 ko01110 ko01120 ko01130 ko01200 ko01230 ko04922 ko05230 map00010 map00260 map00680 map01100 map01110 map01120 map01130 map01200 map01230 map04922 map05230
Pfam Domains
Protein Families
His_Phos_1

Protein Analysis

382

Amino Acids

43.08

Weight (kDa)

9.11

Isoelectric Point (pI)

49.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
His_Phos_1 PF00300 95 - 162 6.5e-18 Histidine phosphatase superfamily (branch 1)
His_Phos_1 PF00300 181 - 299 1.4e-14 Histidine phosphatase superfamily (branch 1)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 60
AccB1I GGYRCC 1 cut(s) 496
AccI GTMKAC 1 cut(s) 417
AccII CGCG 1 cut(s) 590
AciI CCGC 4 cut(s) 279, 353, 590, 1055
AcsI RAATTY 4 cut(s) 823, 932, 1117, 1138
AcuI CTGAAG 2 cut(s) 192, 939
AcyI GRCGYC 1 cut(s) 688
AfaI GTAC 1 cut(s) 705
AfiI CCNNNNNNNGG 2 cut(s) 716, 1008
AgsI TTSAA 5 cut(s) 111, 386, 604, 776, 922
AluBI AGCT 5 cut(s) 191, 389, 749, 859, 1049
AluI AGCT 5 cut(s) 191, 389, 749, 859, 1049
Alw21I GWGCWC 1 cut(s) 451
Alw26I GTCTC 1 cut(s) 638
Alw44I GTGCAC 1 cut(s) 447
AoxI GGCC 1 cut(s) 999
ApaLI GTGCAC 1 cut(s) 447
ApeKI GCWGC 1 cut(s) 812
ApoI RAATTY 4 cut(s) 823, 932, 1117, 1138
Asp700I GAANNNNTTC 3 cut(s) 329, 675, 952
AspLEI GCGC 1 cut(s) 600
AspS9I GGNCC 1 cut(s) 1000
AsuHPI GGTGA 3 cut(s) 11, 29, 314
BaeGI GKGCMC 1 cut(s) 451
BanI GGYRCC 1 cut(s) 496
BauI CACGAG 1 cut(s) 680
BbsI GAAGAC 1 cut(s) 564
Bbv12I GWGCWC 1 cut(s) 451
BbvI GCAGC 1 cut(s) 799
BccI CCATC 1 cut(s) 1103
BclI TGATCA 1 cut(s) 217
BcoDI GTCTC 1 cut(s) 638
BfaI CTAG 1 cut(s) 531
BfoI RGCGCY 1 cut(s) 601
BglII AGATCT 1 cut(s) 833
BisI GCNGC 4 cut(s) 279, 353, 813, 1056
BlpI GCTNAGC 1 cut(s) 356
BlsI GCNGC 4 cut(s) 280, 354, 814, 1057
BmgT120I GGNCC 1 cut(s) 1000
BmiI GGNNCC 2 cut(s) 498, 542
BmsI GCATC 2 cut(s) 897, 1017
BpiI GAAGAC 1 cut(s) 564
Bpu1102I GCTNAGC 1 cut(s) 356
BsaHI GRCGYC 1 cut(s) 688
BsaI GGTCTC 1 cut(s) 638
BsaJI CCNNGG 3 cut(s) 46, 175, 817
BsaXI ACNNNNNCTCC 2 cut(s) 934, 964
Bsc4I CCNNNNNNNGG 2 cut(s) 716, 1008
Bse1I ACTGG 4 cut(s) 40, 340, 500, 901
BseDI CCNNGG 3 cut(s) 46, 175, 817
BseLI CCNNNNNNNGG 2 cut(s) 716, 1008
BseMII CTCAG 2 cut(s) 347, 957
BseNI ACTGG 4 cut(s) 40, 340, 500, 901
BseRI GAGGAG 1 cut(s) 1138
BseSI GKGCMC 1 cut(s) 451
BseXI GCAGC 1 cut(s) 799
BseYI CCCAGC 1 cut(s) 971
BsgI GTGCAG 1 cut(s) 420
Bsh1236I CGCG 1 cut(s) 590
BshFI GGCC 1 cut(s) 1001
BshNI GGYRCC 1 cut(s) 496
BsiHKAI GWGCWC 1 cut(s) 451
BslFI GGGAC 2 cut(s) 28, 214
BslI CCNNNNNNNGG 2 cut(s) 716, 1008
BsmAI GTCTC 1 cut(s) 638
BsmFI GGGAC 2 cut(s) 28, 214
BsmI GAATGC 1 cut(s) 69
BsnI GGCC 1 cut(s) 1001
Bso31I GGTCTC 1 cut(s) 638
Bsp1286I GDGCHC 1 cut(s) 451
Bsp143I GATC 4 cut(s) 217, 423, 766, 833
Bsp1720I GCTNAGC 1 cut(s) 356
Bsp19I CCATGG 1 cut(s) 46
BspACI CCGC 4 cut(s) 279, 353, 590, 1055
BspANI GGCC 1 cut(s) 1001
BspCNI CTCAG 2 cut(s) 348, 958
BspFNI CGCG 1 cut(s) 590
BspLI GGNNCC 2 cut(s) 498, 542
BspT107I GGYRCC 1 cut(s) 496
BspTNI GGTCTC 1 cut(s) 638
BsrI ACTGG 4 cut(s) 40, 340, 500, 901
BssECI CCNNGG 3 cut(s) 46, 175, 817
BssMI GATC 4 cut(s) 217, 423, 766, 833
BssNI GRCGYC 1 cut(s) 688
BssSI CACGAG 1 cut(s) 680
BssT1I CCWWGG 2 cut(s) 46, 175
Bst2BI CACGAG 1 cut(s) 680
Bst4CI ACNGT 3 cut(s) 138, 485, 891
Bst6I CTCTTC 2 cut(s) 139, 369
BstACI GRCGYC 1 cut(s) 688
BstC8I GCNNGC 2 cut(s) 391, 468
BstDEI CTNAG 2 cut(s) 356, 966
BstDSI CCRYGG 2 cut(s) 46, 817
BstFNI CGCG 1 cut(s) 590
BstH2I RGCGCY 1 cut(s) 601
BstHHI GCGC 1 cut(s) 600
BstKTI GATC 4 cut(s) 220, 426, 769, 836
BstMAI GTCTC 1 cut(s) 638
BstMBI GATC 4 cut(s) 217, 423, 766, 833
BstMWI GCNNNNNNNGC 4 cut(s) 386, 467, 746, 1055
BstSLI GKGCMC 1 cut(s) 451
BstUI CGCG 1 cut(s) 590
BstV1I GCAGC 1 cut(s) 799
BstV2I GAAGAC 1 cut(s) 564
BstX2I RGATCY 1 cut(s) 833
BstXI CCANNNNNNTGG 4 cut(s) 29, 47, 583, 997
BstYI RGATCY 1 cut(s) 833
BsuRI GGCC 1 cut(s) 1001
BtgI CCRYGG 2 cut(s) 46, 817
BtsIMutI CAGTG 4 cut(s) 102, 216, 333, 437
Cac8I GCNNGC 2 cut(s) 391, 468
CfoI GCGC 1 cut(s) 600
Cfr13I GGNCC 1 cut(s) 1000
CseI GACGC 1 cut(s) 677
Csp6I GTAC 1 cut(s) 704
CviAII CATG 9 cut(s) 47, 221, 299, 421, 463, 472, 537, 844, 1146
CviQI GTAC 1 cut(s) 704
DdeI CTNAG 2 cut(s) 356, 966
DpnI GATC 4 cut(s) 219, 425, 768, 835
DpnII GATC 4 cut(s) 217, 423, 766, 833
DraI TTTAAA 1 cut(s) 763
Eam1104I CTCTTC 2 cut(s) 139, 369
EarI CTCTTC 2 cut(s) 139, 369
Eco130I CCWWGG 2 cut(s) 46, 175
Eco31I GGTCTC 1 cut(s) 638
Eco57I CTGAAG 2 cut(s) 192, 939
EcoRI GAATTC 1 cut(s) 823
EcoT14I CCWWGG 2 cut(s) 46, 175
EcoT22I ATGCAT 1 cut(s) 1032
ErhI CCWWGG 2 cut(s) 46, 175
FaeI CATG 9 cut(s) 50, 224, 302, 424, 466, 475, 540, 847, 1149
FalI AAGNNNNNCTT 2 cut(s) 366, 398
FaqI GGGAC 2 cut(s) 28, 214
FatI CATG 9 cut(s) 46, 220, 298, 420, 462, 471, 536, 843, 1145
FbaI TGATCA 1 cut(s) 217
FblI GTMKAC 1 cut(s) 417
Fnu4HI GCNGC 4 cut(s) 279, 353, 813, 1056
Fsp4HI GCNGC 4 cut(s) 279, 353, 813, 1056
FspBI CTAG 1 cut(s) 531
GlaI GCGC 1 cut(s) 599
GluI GCNGC 4 cut(s) 279, 353, 813, 1056
GsaI CCCAGC 1 cut(s) 975
HaeII RGCGCY 1 cut(s) 601
HaeIII GGCC 1 cut(s) 1001
HgaI GACGC 1 cut(s) 677
HhaI GCGC 1 cut(s) 600
Hin1I GRCGYC 1 cut(s) 688
Hin1II CATG 9 cut(s) 50, 224, 302, 424, 466, 475, 540, 847, 1149
Hin6I GCGC 1 cut(s) 598
HinP1I GCGC 1 cut(s) 598
HincII GTYRAC 2 cut(s) 418, 894
HindII GTYRAC 2 cut(s) 418, 894
HindIII AAGCTT 1 cut(s) 1047
HinfI GANTC 7 cut(s) 254, 305, 399, 442, 1085, 1098, 1133
HphI GGTGA 3 cut(s) 11, 29, 314
Hpy166II GTNNAC 5 cut(s) 333, 418, 449, 679, 894
Hpy188I TCNGA 4 cut(s) 168, 693, 942, 1108
Hpy188III TCNNGA 7 cut(s) 77, 141, 258, 680, 792, 851, 1089
Hpy8I GTNNAC 5 cut(s) 333, 418, 449, 679, 894
Hpy99I CGWCG 2 cut(s) 489, 693
HpyAV CCTTC 4 cut(s) 358, 487, 661, 963
HpyCH4III ACNGT 3 cut(s) 138, 485, 891
HpyCH4V TGCA 5 cut(s) 437, 449, 511, 571, 1030
HpyF10VI GCNNNNNNNGC 4 cut(s) 386, 467, 746, 1055
HpyF3I CTNAG 2 cut(s) 356, 966
Hsp92I GRCGYC 1 cut(s) 688
Hsp92II CATG 9 cut(s) 50, 224, 302, 424, 466, 475, 540, 847, 1149
HspAI GCGC 1 cut(s) 598
Ksp22I TGATCA 1 cut(s) 217
Kzo9I GATC 4 cut(s) 217, 423, 766, 833
LmnI GCTCC 1 cut(s) 540
Lsp1109I GCAGC 1 cut(s) 799
LweI GCATC 2 cut(s) 897, 1017
MaeI CTAG 1 cut(s) 531
MaeIII GTNAC 1 cut(s) 251
MalI GATC 4 cut(s) 219, 425, 768, 835
MboI GATC 4 cut(s) 217, 423, 766, 833
MboII GAAGA 5 cut(s) 156, 386, 569, 1076, 1125
MflI RGATCY 1 cut(s) 833
MhlI GDGCHC 1 cut(s) 451
MluCI AATT 8 cut(s) 183, 566, 623, 771, 823, 932, 1117, 1138
MlyI GAGTC 3 cut(s) 248, 1094, 1142
MmeI TCCRAC 2 cut(s) 112, 671
Mph1103I ATGCAT 1 cut(s) 1032
MroXI GAANNNNTTC 3 cut(s) 329, 675, 952
MseI TTAA 1 cut(s) 762
MslI CAYNNNNRTG 1 cut(s) 581
MspA1I CMGCKG 1 cut(s) 355
Mva1269I GAATGC 1 cut(s) 69
MvnI CGCG 1 cut(s) 590
MwoI GCNNNNNNNGC 4 cut(s) 386, 467, 746, 1055
NcoI CCATGG 1 cut(s) 46
NdeII GATC 4 cut(s) 217, 423, 766, 833
NlaIII CATG 9 cut(s) 50, 224, 302, 424, 466, 475, 540, 847, 1149
NlaIV GGNNCC 2 cut(s) 498, 542
NmuCI GTSAC 1 cut(s) 251
NsiI ATGCAT 1 cut(s) 1032
PctI GAATGC 1 cut(s) 69
PdmI GAANNNNTTC 3 cut(s) 329, 675, 952
PfeI GAWTC 4 cut(s) 305, 399, 442, 1098
PkrI GCNGC 4 cut(s) 280, 354, 814, 1057
PleI GAGTC 3 cut(s) 248, 1093, 1141
PpsI GAGTC 3 cut(s) 248, 1093, 1141
PsiI TTATAA 1 cut(s) 60
PspFI CCCAGC 1 cut(s) 971
PspN4I GGNNCC 2 cut(s) 498, 542
PspPI GGNCC 1 cut(s) 1000
PsuI RGATCY 1 cut(s) 833
RsaI GTAC 1 cut(s) 705
RsaNI GTAC 1 cut(s) 704
RseI CAYNNNNRTG 1 cut(s) 581
SalI GTCGAC 1 cut(s) 416
SaqAI TTAA 1 cut(s) 762
SatI GCNGC 4 cut(s) 279, 353, 813, 1056
Sau3AI GATC 4 cut(s) 217, 423, 766, 833
Sau96I GGNCC 1 cut(s) 1000
SchI GAGTC 3 cut(s) 248, 1094, 1142
SduI GDGCHC 1 cut(s) 451
SfaNI GCATC 2 cut(s) 897, 1017
SmiMI CAYNNNNRTG 1 cut(s) 581
Sse9I AATT 8 cut(s) 183, 566, 623, 771, 823, 932, 1117, 1138
SsiI CCGC 4 cut(s) 279, 353, 590, 1055
SspMI CTAG 1 cut(s) 531
StyI CCWWGG 2 cut(s) 46, 175
TaaI ACNGT 3 cut(s) 138, 485, 891
TaqI TCGA 4 cut(s) 120, 187, 194, 417
TasI AATT 8 cut(s) 183, 566, 623, 771, 823, 932, 1117, 1138
TauI GCSGC 3 cut(s) 281, 355, 1058
TfiI GAWTC 4 cut(s) 305, 399, 442, 1098
Tru1I TTAA 1 cut(s) 762
Tru9I TTAA 1 cut(s) 762
TscAI CASTG 4 cut(s) 102, 216, 340, 444
TseFI GTSAC 1 cut(s) 251
TseI GCWGC 1 cut(s) 812
Tsp45I GTSAC 1 cut(s) 251
TspDTI ATGAA 5 cut(s) 62, 288, 531, 621, 816
TspRI CASTG 4 cut(s) 102, 216, 340, 444
VneI GTGCAC 1 cut(s) 447
XapI RAATTY 4 cut(s) 823, 932, 1117, 1138
XcmI CCANNNNNNNNNTGG 1 cut(s) 788
XmiI GTMKAC 1 cut(s) 417
XmnI GAANNNNTTC 3 cut(s) 329, 675, 952
XspI CTAG 1 cut(s) 531
Zsp2I ATGCAT 1 cut(s) 1032
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.