Heat Shock Protein
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD12G1139100.v1.1 |
| rosa_chinensis | RchiOBHm_Chr0c22g0500581 RchiOBHm_Chr1g0352491 RchiOBHm_Chr4g0400001 RchiOBHm_Chr6g0250761 RchiOBHm_Chr7g0206671 RchiOBHm_Chr7g0207021 RchiOBHm_Chr7g0207511 |
| rosa_laevigata | RLG00000009219 |
| rosa_multiflora | Rmu_sc0002040.1_g000047 Rmu_sc0003630.1_g000058 Rmu_sc0006740.1_g000001 Rmu_sc0032049.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00344960 |
| rosa_rugosa | Rorug05G0349600 Rorug05G0349600 Rorug05G0349700 Rorug05G0349800 Rorug05G0349900 Rorug07G0006700 |
| rosa_samantha | Rh1AG243100 Rh2AG212000 Rh2AG491800 Rh4AG165600 Rh5DG127900 Rh5DG128800 Rh6AG317800 Rh7DG237200 Rh7DG237600 Rh7DG238400 Rh7DG401800 |
| rosa_wichuraiana | Rw4G008140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 221 |
| AccB1I | GGYRCC | 2 cut(s) | 221, 239 |
| AciI | CCGC | 2 cut(s) | 62, 72 |
| AcsI | RAATTY | 2 cut(s) | 110, 248 |
| AfaI | GTAC | 1 cut(s) | 223 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 231 |
| AluBI | AGCT | 1 cut(s) | 28 |
| AluI | AGCT | 1 cut(s) | 28 |
| AoxI | GGCC | 1 cut(s) | 381 |
| ApoI | RAATTY | 2 cut(s) | 110, 248 |
| Asp718I | GGTACC | 1 cut(s) | 221 |
| AspS9I | GGNCC | 1 cut(s) | 53 |
| AvaII | GGWCC | 1 cut(s) | 53 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 205, 238 |
| BanI | GGYRCC | 2 cut(s) | 221, 239 |
| BbsI | GAAGAC | 1 cut(s) | 111 |
| BccI | CCATC | 1 cut(s) | 113 |
| BcgI | CGANNNNNNTGC | 1 cut(s) | 37 |
| BfaI | CTAG | 1 cut(s) | 270 |
| BglII | AGATCT | 1 cut(s) | 272 |
| BisI | GCNGC | 1 cut(s) | 62 |
| BlsI | GCNGC | 1 cut(s) | 63 |
| Bme18I | GGWCC | 1 cut(s) | 53 |
| BmgT120I | GGNCC | 1 cut(s) | 53 |
| BmiI | GGNNCC | 2 cut(s) | 223, 241 |
| BmsI | GCATC | 1 cut(s) | 172 |
| BpiI | GAAGAC | 1 cut(s) | 111 |
| Bsa29I | ATCGAT | 1 cut(s) | 42 |
| BsaBI | GATNNNNATC | 1 cut(s) | 44 |
| BsaJI | CCNNGG | 3 cut(s) | 17, 217, 261 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 231 |
| Bse3DI | GCAATG | 1 cut(s) | 225 |
| Bse8I | GATNNNNATC | 1 cut(s) | 44 |
| BseCI | ATCGAT | 1 cut(s) | 42 |
| BseDI | CCNNGG | 3 cut(s) | 17, 217, 261 |
| BseJI | GATNNNNATC | 1 cut(s) | 44 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 231 |
| BseMI | GCAATG | 1 cut(s) | 225 |
| BseRI | GAGGAG | 1 cut(s) | 70 |
| Bsh1285I | CGRYCG | 2 cut(s) | 23, 42 |
| BshFI | GGCC | 1 cut(s) | 383 |
| BshNI | GGYRCC | 2 cut(s) | 221, 239 |
| BshVI | ATCGAT | 1 cut(s) | 42 |
| BsiEI | CGRYCG | 2 cut(s) | 23, 42 |
| BsiSI | CCGG | 1 cut(s) | 84 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 231 |
| BsnI | GGCC | 1 cut(s) | 383 |
| Bsp143I | GATC | 2 cut(s) | 39, 272 |
| BspACI | CCGC | 2 cut(s) | 62, 72 |
| BspANI | GGCC | 1 cut(s) | 383 |
| BspDI | ATCGAT | 1 cut(s) | 42 |
| BspLI | GGNNCC | 2 cut(s) | 223, 241 |
| BspT107I | GGYRCC | 2 cut(s) | 221, 239 |
| BsrDI | GCAATG | 1 cut(s) | 225 |
| BssECI | CCNNGG | 3 cut(s) | 17, 217, 261 |
| BssMI | GATC | 2 cut(s) | 39, 272 |
| BssT1I | CCWWGG | 2 cut(s) | 217, 261 |
| Bst4CI | ACNGT | 3 cut(s) | 21, 53, 146 |
| Bst6I | CTCTTC | 2 cut(s) | 336, 351 |
| BstDSI | CCRYGG | 1 cut(s) | 17 |
| BstKTI | GATC | 2 cut(s) | 42, 275 |
| BstMBI | GATC | 2 cut(s) | 39, 272 |
| BstMCI | CGRYCG | 2 cut(s) | 23, 42 |
| BstV2I | GAAGAC | 1 cut(s) | 111 |
| BstX2I | RGATCY | 1 cut(s) | 272 |
| BstYI | RGATCY | 1 cut(s) | 272 |
| Bsu15I | ATCGAT | 1 cut(s) | 42 |
| BsuRI | GGCC | 1 cut(s) | 383 |
| BsuTUI | ATCGAT | 1 cut(s) | 42 |
| BtgI | CCRYGG | 1 cut(s) | 17 |
| Cfr13I | GGNCC | 1 cut(s) | 53 |
| ClaI | ATCGAT | 1 cut(s) | 42 |
| Csp6I | GTAC | 1 cut(s) | 222 |
| CviAII | CATG | 5 cut(s) | 181, 253, 286, 326, 373 |
| CviJI | RGCY | 4 cut(s) | 28, 260, 266, 383 |
| CviKI_1 | RGCY | 4 cut(s) | 28, 260, 266, 383 |
| CviQI | GTAC | 1 cut(s) | 222 |
| DpnI | GATC | 2 cut(s) | 41, 274 |
| DpnII | GATC | 2 cut(s) | 39, 272 |
| Eam1104I | CTCTTC | 2 cut(s) | 336, 351 |
| EarI | CTCTTC | 2 cut(s) | 336, 351 |
| Eco130I | CCWWGG | 2 cut(s) | 217, 261 |
| Eco32I | GATATC | 1 cut(s) | 46 |
| Eco47I | GGWCC | 1 cut(s) | 53 |
| EcoRV | GATATC | 1 cut(s) | 46 |
| EcoT14I | CCWWGG | 2 cut(s) | 217, 261 |
| ErhI | CCWWGG | 2 cut(s) | 217, 261 |
| FaeI | CATG | 5 cut(s) | 184, 256, 289, 329, 376 |
| FaiI | YATR | 7 cut(s) | 182, 254, 287, 322, 327, 374, 404 |
| FatI | CATG | 5 cut(s) | 180, 252, 285, 325, 372 |
| FauI | CCCGC | 1 cut(s) | 79 |
| Fnu4HI | GCNGC | 1 cut(s) | 62 |
| Fsp4HI | GCNGC | 1 cut(s) | 62 |
| FspBI | CTAG | 1 cut(s) | 270 |
| GluI | GCNGC | 1 cut(s) | 62 |
| HaeIII | GGCC | 1 cut(s) | 383 |
| HapII | CCGG | 1 cut(s) | 84 |
| Hin1II | CATG | 5 cut(s) | 184, 256, 289, 329, 376 |
| HincII | GTYRAC | 1 cut(s) | 211 |
| HindII | GTYRAC | 1 cut(s) | 211 |
| HinfI | GANTC | 2 cut(s) | 77, 309 |
| HpaII | CCGG | 1 cut(s) | 84 |
| Hpy166II | GTNNAC | 1 cut(s) | 211 |
| Hpy188I | TCNGA | 1 cut(s) | 277 |
| Hpy188III | TCNNGA | 1 cut(s) | 116 |
| Hpy8I | GTNNAC | 1 cut(s) | 211 |
| HpyAV | CCTTC | 4 cut(s) | 91, 152, 331, 355 |
| HpyCH4III | ACNGT | 3 cut(s) | 21, 53, 146 |
| HpyCH4V | TGCA | 2 cut(s) | 230, 320 |
| Hsp92II | CATG | 5 cut(s) | 184, 256, 289, 329, 376 |
| KpnI | GGTACC | 1 cut(s) | 225 |
| Kzo9I | GATC | 2 cut(s) | 39, 272 |
| LmnI | GCTCC | 1 cut(s) | 33 |
| LpnPI | CCDG | 6 cut(s) | 97, 129, 152, 222, 365, 398 |
| LweI | GCATC | 1 cut(s) | 172 |
| MaeI | CTAG | 1 cut(s) | 270 |
| MalI | GATC | 2 cut(s) | 41, 274 |
| MboI | GATC | 2 cut(s) | 39, 272 |
| MboII | GAAGA | 4 cut(s) | 113, 116, 353, 368 |
| MflI | RGATCY | 1 cut(s) | 272 |
| MluCI | AATT | 3 cut(s) | 110, 123, 248 |
| MlyI | GAGTC | 1 cut(s) | 71 |
| MmeI | TCCRAC | 1 cut(s) | 286 |
| MnlI | CCTC | 3 cut(s) | 66, 91, 337 |
| MspI | CCGG | 1 cut(s) | 84 |
| NdeII | GATC | 2 cut(s) | 39, 272 |
| NlaIII | CATG | 5 cut(s) | 184, 256, 289, 329, 376 |
| NlaIV | GGNNCC | 2 cut(s) | 223, 241 |
| PfeI | GAWTC | 1 cut(s) | 309 |
| PkrI | GCNGC | 1 cut(s) | 63 |
| Ple19I | CGATCG | 1 cut(s) | 42 |
| PleI | GAGTC | 1 cut(s) | 71 |
| PpsI | GAGTC | 1 cut(s) | 71 |
| PspN4I | GGNNCC | 2 cut(s) | 223, 241 |
| PspPI | GGNCC | 1 cut(s) | 53 |
| PsuI | RGATCY | 1 cut(s) | 272 |
| PvuI | CGATCG | 1 cut(s) | 42 |
| RsaI | GTAC | 1 cut(s) | 223 |
| RsaNI | GTAC | 1 cut(s) | 222 |
| SatI | GCNGC | 1 cut(s) | 62 |
| Sau3AI | GATC | 2 cut(s) | 39, 272 |
| Sau96I | GGNCC | 1 cut(s) | 53 |
| SchI | GAGTC | 1 cut(s) | 71 |
| SetI | ASST | 4 cut(s) | 30, 171, 219, 236 |
| SfaNI | GCATC | 1 cut(s) | 172 |
| SinI | GGWCC | 1 cut(s) | 53 |
| Sse9I | AATT | 3 cut(s) | 110, 123, 248 |
| SsiI | CCGC | 2 cut(s) | 62, 72 |
| SspMI | CTAG | 1 cut(s) | 270 |
| StyI | CCWWGG | 2 cut(s) | 217, 261 |
| TaaI | ACNGT | 3 cut(s) | 21, 53, 146 |
| TaqI | TCGA | 2 cut(s) | 23, 42 |
| TasI | AATT | 3 cut(s) | 110, 123, 248 |
| TauI | GCSGC | 1 cut(s) | 64 |
| TfiI | GAWTC | 1 cut(s) | 309 |
| TspDTI | ATGAA | 2 cut(s) | 241, 369 |
| VpaK11BI | GGWCC | 1 cut(s) | 53 |
| XapI | RAATTY | 2 cut(s) | 110, 248 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 250 |
| XspI | CTAG | 1 cut(s) | 270 |