Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003895

Physical Location & Seq

Genomic Coordinates Forward (+)

284350 .. 291203

Gene Structure 6854 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G01790.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3582 bp

ATGGAGTATGCGTCTACTTTTCAAAGGCCGATTCTATTCCATGGTGGAGATGGTGCGAGTTACTGCTTTCCAAATCGATTGATAAGTCCTAAAGGAATCAGCATTACATCTGGGGATTCTAAAGTGCATTCGTGTTTTCGATTGAGGAGAAATGTAGCACAAAGTGGTACATTGAATTTGATGAATGCGTGTTTCTCTGGAAGGTTTTATAGTGGTCATTTGCATTCTACAAAATCAATACTTGGCAATGGCCACCAAGCCAAAAGAATCCCTTTTGGATTTAGGTTACGTTGTCAGGGTCATGAATCTCTGGGTAATGCCGATAGTAATGATCATCGGATCGGGGAATCTTCCGAAAGTAGTGATGAAACTGAAGCTACAGATTTGAAAGATGCGAGAGTGGAAAACGACACTGATAGTTTGGAGGAACTCAAGGAGTTACTACACAAGGCAATTAAAGAATTGGAAGTTGCTAGGCTCAATAGTACCATGTTTGAGGAAAAGGCTCAGAGAATCTCAGAAAGAGCCATAGCACTCAAGGATGAAGCTGCTACTGCTTGGCTTGACGTAAACAAAACCCTTGATGTCATTCGAGATACTGTTTATGAGGAGGCTCTTGCTAAAGAAGCTGTTCAAACGGCTACTATGGCCCTGTCTCTGGCTGAAGCTAGGCTTCAGGTTATAGTGGAATCACTTGAAGCTGGTGCAGGGAATGATATTCCACATGTGTCTGAAGAGACTGAGGAAACAATAGATGTTAATGATAAAGAAGAAGCTCTTTTAGCTGCCAAGGATGATATTAAAGAATGCCAAGTTAATTTAGATAATTGTGAGTCCCAACTGAGTGCTTTGCTGAGCAAAAAAGACGAGCTGCAAAAGGAAGTGGACAAGTTGAATGAGTTCGCTGAGACAATACAGATCAGTTCGTTGAAAGCCGAGGAGGATGTTACCAATATTATGAAATTGGCTGAACAAGCTGTAGCATTTGAGCTTGAGGCTACTCAACGCGTTAATGATGCAGAGATTGCTTTACAGAGAGCAGAGAAGTCTCTCTCCATTTCTCAGACCCCAGAGGAAACTCAGGGCCAACTCTCGGATGAAGAAACTTCTCAGGAGGATGCGATGGTACTTTCAGGTAACGTTGAAGATGTTACCCATCAGGTTGAAAAAGAATCACCTAAAGATGGAGATCTACCAGTGGTACAGATCACAGCTGAACTTGTGCCTGATATAGTTGGTCAGAGGAATAAAAAACTAACTCAGCCTTATGAGTCAAGCGATCATGAGAATGGAAAGCCAAGTGTAGAGTCTTCTAAAGTGGTTGAAGCAGATTCTGAAAAGCCAAAGATTAATGTTCAGACAAAAAAACAGGAAACTCAAAAAGATCTGCCAAAGGAGGGTTCCTCTCTTAATTCTCCCAAGGCATCGTTTAATAAATCCTCCCGTTTCTTTTCTGCATCTTTCTTCTCTTCTAATCCAGATGGGACCGCGACAGTGTTTGGTAGTCTGGTTGGTTCTGTCAAACAGCAATGGCCCAAACTAGTTCTTGGGCTTGCTCTTCTTGGAGCAGGACTGACATTATACTCCAATGGAGTAGGGGGGAACAACCAGTTGCTTCAACAGCCAGATGTTACCAGCACTAGTACAGAAGATGTCTCTTCAAGTACGAAGCCACTGATCCGGCAAGTGCAGAAACTTCCCAAGAGAATTAAGAAACTACTTGAGATGATCCCTCACCAGGAGGTCAATGAGGAAGAAGCTTCCCTCTTTGACTTTTTGTGGTTACTGCTAGCAAGCGTCATATTTGTGCCTCTATTTCAGAAAATTCCTGGAGGCAGCCCTGTTCTTGGGTATTTGGCAGCTGGAATTCTGATTGGTCCGTATGGTCTTTCGATAATCCGTAATGTGCACGGAACCAGGGCCATCGCAGAATTTGGAGTAGTTTTCTTGCTTTTCAACATCGGCCTTGAGCTATCTGTTGAAAGACTGAGTTCCATGAAGAAATATGTTTTTGGATTAGGCTCAGCTCAGGTTCTGGTGACGGCAGCAGTAGTTGGATTGCTTGCCCATTATGTTGCTGGTCAGGCTGGTCCAGCAGCAATAGTGATTGGAAATGGCCTGGCTCTGTCGTCCACTGCTGTTGTCCTTCAGGTTCTACAAGAACGAGGCGAGAGTACATCTAGACATGGAAGGGCTTCATTTTCCGTCTTGCTTTTCCAGGATCTAGCTGTAGTTGTTTTACTGATTCTCATCCCACTTATTTCACCTAATTCATCGAAAGGAGGGATTGGATTTCAAGCCATTGCTGAAGCTCTTGGGCTTGCTGCAGTCAAAGCAGCAGTGGCTATTACTGCAATAATTGCTGGTGGCCGTCTACTTCTTCGACCAATCTACAAGCAAATTGCAGAAAATCGAAACGCCGAGATATTCTCTGCCAACACGCTTCTCGTTATTCTTGGGACTAGTTTACTGACAGCTAGGGCTGGACTTTCCATGGCATTAGGAGCGTTTTTGGCTGGTCTACTCCTTGCAGAGACAGAATTTTCGTTGCAAGTAGAATCAGATATTGCTCCATATCGTGGTCTTCTGTTGGGACTCTTCTTCATGACGGTTGGAATGTCAATTGATCCGAAATTACTTCTCTCCAACTTCCCTGTCATAGTGGGAACTTTGGGACTCTTGATAGTGGGCAAAACTATGTTAGTCGTGATTATGGGAAAATTGTTCGGCATATCAATAATATCTGCAATTCGGGTCGGTCTACTATTGGCCCCAGGCGGAGAGTTTGCATTTGTTGCTTTCGGAGAAGCTGTTAATCAGGGTATAATGTCTCCTCAGTTATCTTCGTTGCTATTCCTTGTCGTGGGAATCTCAATGGCTATCACACCCTGGTTAGCTGCTGGTGGCCAGTTAATTGCATCTCGTTTTGAGTTGCATGATGTTCGAAGTTTATTGCCCGTCGAGAGTGAGACAGATGATTTGCAGGGTCACATAATTATTTGTGGATTTGGTCGAGTTGGTCAGATAATTGCTCAACTTCTCTCGGAAAGACTTATCCCATTTGTTGCCCTTGATGTCAGCAGTGATAGAGTGACTATCGGGCGTTCCTTGGATCTTCCTGTTTATTTCGGAGACGCTGGTAGTAAAGAGGTTCTCCACAAAATTGGAGCTGGGAGAGCATGTGCTGCTGTGGTTGCCTTAGACGCACCAGGAGCAAACTACAGATGTGTTTGGGCTTTGAGCAAGTTTTACCCCAATGTCAAAACTTTTGTCCGTGCTCACGATGTTGTTCATGGTCTTAATCTAGAAAAAGCCGGTGCTACTGCAGTTGTCCCGGAGACTCTGGAGCCTAGTCTACAGTTGGCAGCTGCTGTTCTTGCTCAGGCAAAATTACCGACATCGGAAATTGCAAACACGATTAACGAGTTCAGAACCCGTCACTTGTCTGAACTGACCGAGCTATGTGAAGCAAGCGGAAGCTCTCTAGGCTATGGGTACTCTAGGACGAGTAAGCCTAAACCTCAACCATCGGATGCATCTGGCGATAACCAGATAATCGAAGGAGGCACAGTCGTAATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005451 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006996 GO:0008150 GO:0008324 GO:0009507 GO:0009526 GO:0009536 GO:0009657 GO:0009658 GO:0009941 GO:0009987 GO:0010109 GO:0015075 GO:0015077 GO:0015078 GO:0015079 GO:0015291 GO:0015297 GO:0015298 GO:0015299 GO:0015318 GO:0015386 GO:0015491 GO:0015672 GO:0016020 GO:0016043 GO:0019222 GO:0022804 GO:0022821 GO:0022857 GO:0022890 GO:0030001 GO:0031090 GO:0031323 GO:0031967 GO:0031969 GO:0031975 GO:0034220 GO:0042170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0051179 GO:0051234 GO:0055085 GO:0065007 GO:0071804 GO:0071805 GO:0071840 GO:0098655 GO:0098660 GO:0098662 GO:0099516 GO:1902600

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MutS_I MutS_II MutS_III MutS_V Na_H_Exchanger TrkA_N

Protein Analysis

1193

Amino Acids

128.03

Weight (kDa)

5.22

Isoelectric Point (pI)

36.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_H_Exchanger	PF00999	599 - 965	1.7e-56	Sodium/hydrogen exchanger, transmembrane
TrkA_N	PF02254	998 - 1111	2.3e-20	TrkA-N domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0003895)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01790 AT1G01790 AT4G04850 AT4G04850
fragaria_vesca	FvH4_2g11000
malus_domestica	MD05G1050600.v1.1 MD10G1058200.v1.1
prunus_persica	Prupe.8G077000_v2.0.a1 Prupe.8G077000_v2.0.a1
pyrus_communis	pycom05g04260 pycom05g04270 pycom10g04490
rosa_chinensis	RchiOBHm_Chr6g0269141 RchiOBHm_Chr6g0269211 RchiOBHm_Chr7g0201951
rosa_laevigata	RLG00000017131
rosa_multiflora	Rmu_co8385553.1_g000001 Rmu_sc0005353.1_g000001
rosa_roxburghii	Rroxscaffold_3G00238290 Rroxscaffold_7G00198940
rosa_rugosa	Rorug05G0148000 Rorug05G0148100 Rorug06G0046600 Rorug06G0046600
rosa_samantha	Rh4DG004100 Rh6AG166300 Rh6BG171900 Rh6CG164800 Rh6CG165400 Rh6DG156300 Rh6DG156400 Rh6DG157000 Rh7AG286500
rosa_wichuraiana	Rw6G014360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	2579
AccI	GTMKAC	5 cut(s)	14, 2374, 2521, 2761, 3355
AccII	CGCG	2 cut(s)	1008, 1490
AciI	CCGC	3 cut(s)	1488, 2778, 3474
AclI	AACGTT	1 cut(s)	1140
AclWI	GGATC	6 cut(s)	347, 1672, 1723, 2229, 2621, 3120
AcoI	YGGCCR	3 cut(s)	250, 2368, 2905
AcsI	RAATTY	5 cut(s)	175, 1824, 1866, 1931, 2540
AcuI	CTGAAG	6 cut(s)	393, 659, 684, 753, 2132, 2328
AdeI	CACNNNGTG	1 cut(s)	164
AfaI	GTAC	8 cut(s)	169, 487, 1128, 1203, 1645, 1666, 2176, 3497
AfiI	CCNNNNNNNGG	8 cut(s)	658, 1093, 1184, 1397, 1738, 1847, 2579, 2863
AflIII	ACRYGT	2 cut(s)	724, 1006
AhlI	ACTAGT	3 cut(s)	1540, 1640, 2462
AjnI	CCWGG	8 cut(s)	1737, 1828, 1916, 2118, 2217, 2773, 2888, 3208
AjuI	GAANNNNNNNTTGG	2 cut(s)	1384, 1416
Alw21I	GWGCWC	2 cut(s)	1911, 3280
Alw44I	GTGCAC	1 cut(s)	1907
AlwI	GGATC	6 cut(s)	347, 1672, 1723, 2229, 2621, 3120
AlwNI	CAGNNNCTG	3 cut(s)	1334, 2035, 3371
ApaLI	GTGCAC	1 cut(s)	1907
ApoI	RAATTY	5 cut(s)	175, 1824, 1866, 1931, 2540
ArsI	GACNNNNNNTTYG	6 cut(s)	2527, 2559, 2962, 2994, 3255, 3287
AseI	ATTAAT	1 cut(s)	1350
Asp700I	GAANNNNTTC	3 cut(s)	630, 899, 2194
AspS9I	GGNCC	8 cut(s)	649, 1084, 1485, 1533, 1877, 1920, 2090, 2770
AsuC2I	CCSGG	1 cut(s)	3335
AsuHPI	GGTGA	4 cut(s)	1167, 1727, 2050, 2256
AsuII	TTCGAA	1 cut(s)	2944
AsuNHI	GCTAGC	1 cut(s)	1789
AvaII	GGWCC	3 cut(s)	1485, 1877, 2090
BaeGI	GKGCMC	1 cut(s)	1911
BalI	TGGCCA	2 cut(s)	252, 2907
BbsI	GAAGAC	2 cut(s)	1302, 2576
Bbv12I	GWGCWC	2 cut(s)	1911, 3280
BccI	CCATC	7 cut(s)	44, 1117, 1164, 1178, 1475, 1931, 3535
BceAI	ACGGC	3 cut(s)	654, 2058, 2355
BcgI	CGANNNNNNTGC	2 cut(s)	2924, 2958
BciT130I	CCWGG	8 cut(s)	1739, 1830, 1918, 2120, 2219, 2775, 2890, 3210
BclI	TGATCA	1 cut(s)	331
BcnI	CCSGG	1 cut(s)	3335
BcuI	ACTAGT	3 cut(s)	1540, 1640, 2462
BfmI	CTRYAG	7 cut(s)	378, 978, 2229, 2325, 3220, 3324, 3356
BglII	AGATCT	2 cut(s)	1189, 1384
BlpI	GCTNAGC	2 cut(s)	854, 2023
Bme1390I	CCNGG	9 cut(s)	1739, 1830, 1918, 2120, 2219, 2775, 2890, 3210, 3335
Bme18I	GGWCC	3 cut(s)	1485, 1877, 2090
BmgT120I	GGNCC	8 cut(s)	649, 1084, 1485, 1533, 1877, 1920, 2090, 2770
BmiI	GGNNCC	5 cut(s)	1402, 1486, 1915, 2772, 3348
BmrFI	CCNGG	9 cut(s)	1739, 1830, 1918, 2120, 2219, 2775, 2890, 3210, 3335
BmsI	GCATC	8 cut(s)	382, 1006, 1108, 1433, 1466, 2927, 3523, 3545
BmtI	GCTAGC	1 cut(s)	1793
BpiI	GAAGAC	2 cut(s)	1302, 2576
BplI	GAGNNNNNCTC	4 cut(s)	1388, 1420, 2414, 2446
BpmI	CTGGAG	2 cut(s)	1851, 3365
Bpu10I	CCTNAGC	2 cut(s)	2028, 3381
Bpu1102I	GCTNAGC	2 cut(s)	854, 2023
Bpu14I	TTCGAA	1 cut(s)	2944
BpuEI	CTTGAG	5 cut(s)	416, 521, 1013, 1742, 1988
BpuMI	CCSGG	1 cut(s)	3335
Bsa29I	ATCGAT	1 cut(s)	76
BsaBI	GATNNNNATC	2 cut(s)	1188, 2249
BsaJI	CCNNGG	9 cut(s)	40, 789, 936, 1419, 1917, 2493, 2773, 2888, 3108
BsaXI	ACNNNNNCTCC	6 cut(s)	26, 2796, 2826, 3166, 3196, 3555
Bsc4I	CCNNNNNNNGG	8 cut(s)	658, 1093, 1184, 1397, 1738, 1847, 2579, 2863
Bse118I	RCCGGY	1 cut(s)	3314
Bse1I	ACTGG	3 cut(s)	1196, 1609, 2908
Bse3DI	GCAATG	3 cut(s)	253, 1535, 2301
Bse8I	GATNNNNATC	2 cut(s)	1188, 2249
BseBI	CCWGG	8 cut(s)	1739, 1830, 1918, 2120, 2219, 2775, 2890, 3210
BseCI	ATCGAT	1 cut(s)	76
BseDI	CCNNGG	9 cut(s)	40, 789, 936, 1419, 1917, 2493, 2773, 2888, 3108
BseGI	GGATG	7 cut(s)	547, 799, 949, 1102, 1123, 2250, 3538
BseJI	GATNNNNATC	2 cut(s)	1188, 2249
BseLI	CCNNNNNNNGG	8 cut(s)	658, 1093, 1184, 1397, 1738, 1847, 2579, 2863
BseMI	GCAATG	3 cut(s)	253, 1535, 2301
BseNI	ACTGG	3 cut(s)	1196, 1609, 2908
BseRI	GAGGAG	4 cut(s)	160, 623, 953, 2823
BseSI	GKGCMC	1 cut(s)	1911
BseYI	CCCAGC	1 cut(s)	3170
BsgI	GTGCAG	2 cut(s)	726, 1709
Bsh1236I	CGCG	2 cut(s)	1008, 1490
BshVI	ATCGAT	1 cut(s)	76
BsiHKAI	GWGCWC	2 cut(s)	1911, 3280
BsiSI	CCGG	3 cut(s)	1681, 3315, 3335
BslFI	GGGAC	6 cut(s)	820, 1498, 2473, 2607, 2688, 3317
BslI	CCNNNNNNNGG	8 cut(s)	658, 1093, 1184, 1397, 1738, 1847, 2579, 2863
BsmBI	CGTCTC	1 cut(s)	3126
BsmFI	GGGAC	6 cut(s)	820, 1498, 2473, 2607, 2688, 3317
BsmI	GAATGC	4 cut(s)	127, 190, 223, 812
Bsp119I	TTCGAA	1 cut(s)	2944
Bsp1286I	GDGCHC	2 cut(s)	1911, 3280
Bsp1720I	GCTNAGC	2 cut(s)	854, 2023
Bsp19I	CCATGG	2 cut(s)	40, 2493
BspACI	CCGC	3 cut(s)	1488, 2778, 3474
BspDI	ATCGAT	1 cut(s)	76
BspFNI	CGCG	2 cut(s)	1008, 1490
BspHI	TCATGA	3 cut(s)	301, 1282, 2604
BspLI	GGNNCC	5 cut(s)	1402, 1486, 1915, 2772, 3348
BspMAI	CTGCAG	2 cut(s)	2329, 3328
BspOI	GCTAGC	1 cut(s)	1793
BspPI	GGATC	6 cut(s)	347, 1672, 1723, 2229, 2621, 3120
BspQI	GCTCTTC	1 cut(s)	1563
BspT104I	TTCGAA	1 cut(s)	2944
BsrDI	GCAATG	3 cut(s)	253, 1535, 2301
BsrFI	RCCGGY	1 cut(s)	3314
BsrI	ACTGG	3 cut(s)	1196, 1609, 2908
BssAI	RCCGGY	1 cut(s)	3314
BssECI	CCNNGG	9 cut(s)	40, 789, 936, 1419, 1917, 2493, 2773, 2888, 3108
BssT1I	CCWWGG	5 cut(s)	40, 789, 1419, 2493, 3108
Bst2UI	CCWGG	8 cut(s)	1739, 1830, 1918, 2120, 2219, 2775, 2890, 3210
Bst4CI	ACNGT	5 cut(s)	601, 1495, 2611, 3360, 3571
Bst6I	CTCTTC	5 cut(s)	729, 1474, 1563, 1663, 2603
BstAPI	GCANNNNNTGC	4 cut(s)	1025, 2360, 2795, 3185
BstBI	TTCGAA	1 cut(s)	2944
BstC8I	GCNNGC	6 cut(s)	1554, 1791, 1795, 2064, 2322, 3472
BstDSI	CCRYGG	2 cut(s)	40, 2493
BstF5I	GGATG	7 cut(s)	547, 799, 949, 1102, 1123, 2250, 3538
BstFNI	CGCG	2 cut(s)	1008, 1490
BstNI	CCWGG	8 cut(s)	1739, 1830, 1918, 2120, 2219, 2775, 2890, 3210
BstNSI	RCATGY	2 cut(s)	728, 3183
BstSCI	CCNGG	9 cut(s)	1737, 1828, 1916, 2118, 2217, 2773, 2888, 3208, 3333
BstSFI	CTRYAG	7 cut(s)	378, 978, 2229, 2325, 3220, 3324, 3356
BstSLI	GKGCMC	1 cut(s)	1911
BstUI	CGCG	2 cut(s)	1008, 1490
BstV2I	GAAGAC	2 cut(s)	1302, 2576
BstX2I	RGATCY	4 cut(s)	1189, 1384, 2221, 3112
BstXI	CCANNNNNNTGG	1 cut(s)	3164
BstYI	RGATCY	4 cut(s)	1189, 1384, 2221, 3112
Bsu15I	ATCGAT	1 cut(s)	76
BsuTUI	ATCGAT	1 cut(s)	76
BtgI	CCRYGG	2 cut(s)	40, 2493
BtgZI	GCGATG	2 cut(s)	1136, 1909
BtsCI	GGATG	7 cut(s)	547, 799, 949, 1102, 1123, 2250, 3538
BtsI	GCAGTG	3 cut(s)	2133, 2346, 3088
BtsIMutI	CAGTG	7 cut(s)	411, 1203, 1500, 1673, 2133, 2346, 3088
Cac8I	GCNNGC	6 cut(s)	1554, 1791, 1795, 2064, 2322, 3472
CaiI	CAGNNNCTG	3 cut(s)	1334, 2035, 3371
CciI	TCATGA	3 cut(s)	301, 1282, 2604
Cfr10I	RCCGGY	1 cut(s)	3314
Cfr13I	GGNCC	8 cut(s)	649, 1084, 1485, 1533, 1877, 1920, 2090, 2770
ClaI	ATCGAT	1 cut(s)	76
CseI	GACGC	3 cut(s)	1786, 3143, 3212
Csp6I	GTAC	8 cut(s)	168, 486, 1127, 1202, 1644, 1665, 2175, 3496
CspCI	CAANNNNNGTGG	2 cut(s)	2122, 2157
CviQI	GTAC	8 cut(s)	168, 486, 1127, 1202, 1644, 1665, 2175, 3496
DraIII	CACNNNGTG	1 cut(s)	164
EaeI	YGGCCR	3 cut(s)	250, 2368, 2905
Eam1104I	CTCTTC	5 cut(s)	729, 1474, 1563, 1663, 2603
EarI	CTCTTC	5 cut(s)	729, 1474, 1563, 1663, 2603
EciI	GGCGGA	1 cut(s)	2793
Eco130I	CCWWGG	5 cut(s)	40, 789, 1419, 2493, 3108
Eco47I	GGWCC	3 cut(s)	1485, 1877, 2090
Eco57I	CTGAAG	6 cut(s)	393, 659, 684, 753, 2132, 2328
EcoRI	GAATTC	1 cut(s)	1866
EcoRII	CCWGG	8 cut(s)	1737, 1828, 1916, 2118, 2217, 2773, 2888, 3208
EcoT14I	CCWWGG	5 cut(s)	40, 789, 1419, 2493, 3108
EcoT22I	ATGCAT	1 cut(s)	3538
ErhI	CCWWGG	5 cut(s)	40, 789, 1419, 2493, 3108
Esp3I	CGTCTC	1 cut(s)	3126
FalI	AAGNNNNNCTT	6 cut(s)	256, 288, 657, 689, 762, 794
FaqI	GGGAC	6 cut(s)	820, 1498, 2473, 2607, 2688, 3317
FbaI	TGATCA	1 cut(s)	331
FblI	GTMKAC	5 cut(s)	14, 2374, 2521, 2761, 3355
FokI	GGATG	7 cut(s)	554, 806, 956, 1109, 1130, 2237, 3545
GsaI	CCCAGC	1 cut(s)	3174
GsuI	CTGGAG	2 cut(s)	1851, 3365
HapII	CCGG	3 cut(s)	1681, 3315, 3335
HgaI	GACGC	3 cut(s)	1786, 3143, 3212
HindIII	AAGCTT	1 cut(s)	1758
HpaII	CCGG	3 cut(s)	1681, 3315, 3335
HphI	GGTGA	4 cut(s)	1167, 1727, 2050, 2256
Hpy99I	CGWCG	1 cut(s)	2963
HpyAV	CCTTC	4 cut(s)	195, 2156, 2184, 3554
HpyCH4III	ACNGT	5 cut(s)	601, 1495, 2611, 3360, 3571
HpyCH4IV	ACGT	3 cut(s)	289, 567, 1140
HpySE526I	ACGT	3 cut(s)	289, 567, 1140
Ksp22I	TGATCA	1 cut(s)	331
LguI	GCTCTTC	1 cut(s)	1563
LmnI	GCTCC	6 cut(s)	1565, 2504, 2575, 3167, 3212, 3346
LweI	GCATC	8 cut(s)	382, 1006, 1108, 1433, 1466, 2927, 3523, 3545
MaeII	ACGT	3 cut(s)	289, 567, 1140
MfeI	CAATTG	1 cut(s)	2622
MflI	RGATCY	4 cut(s)	1189, 1384, 2221, 3112
MhlI	GDGCHC	2 cut(s)	1911, 3280
MlsI	TGGCCA	2 cut(s)	252, 2907
MluI	ACGCGT	1 cut(s)	1006
MluNI	TGGCCA	2 cut(s)	252, 2907
MlyI	GAGTC	6 cut(s)	842, 1280, 1316, 2589, 2670, 3334
MmeI	TCCRAC	3 cut(s)	2035, 2593, 2670
Mox20I	TGGCCA	2 cut(s)	252, 2907
Mph1103I	ATGCAT	1 cut(s)	3538
MroXI	GAANNNNTTC	3 cut(s)	630, 899, 2194
MscI	TGGCCA	2 cut(s)	252, 2907
MslI	CAYNNNNRTG	2 cut(s)	1287, 1805
Msp20I	TGGCCA	2 cut(s)	252, 2907
MspA1I	CMGCKG	3 cut(s)	1214, 1862, 3368
MspI	CCGG	3 cut(s)	1681, 3315, 3335
MspR9I	CCNGG	9 cut(s)	1739, 1830, 1918, 2120, 2219, 2775, 2890, 3210, 3335
MunI	CAATTG	1 cut(s)	2622
Mva1269I	GAATGC	4 cut(s)	127, 190, 223, 812
MvaI	CCWGG	8 cut(s)	1739, 1830, 1918, 2120, 2219, 2775, 2890, 3210
MvnI	CGCG	2 cut(s)	1008, 1490
NciI	CCSGG	1 cut(s)	3335
NcoI	CCATGG	2 cut(s)	40, 2493
NheI	GCTAGC	1 cut(s)	1789
NlaIV	GGNNCC	5 cut(s)	1402, 1486, 1915, 2772, 3348
NmeAIII	GCCGAG	2 cut(s)	961, 2446
NmuCI	GTSAC	4 cut(s)	2038, 2987, 3091, 3437
NsiI	ATGCAT	1 cut(s)	3538
NspI	RCATGY	2 cut(s)	728, 3183
NspV	TTCGAA	1 cut(s)	2944
PagI	TCATGA	3 cut(s)	301, 1282, 2604
PciI	ACATGT	1 cut(s)	724
PciSI	GCTCTTC	1 cut(s)	1563
PctI	GAATGC	4 cut(s)	127, 190, 223, 812
PdmI	GAANNNNTTC	3 cut(s)	630, 899, 2194
PflMI	CCANNNNNTGG	1 cut(s)	2579
PfoI	TCCNGGA	3 cut(s)	1828, 2217, 3333
PleI	GAGTC	6 cut(s)	841, 1279, 1315, 2589, 2670, 3334
PpsI	GAGTC	6 cut(s)	841, 1279, 1315, 2589, 2670, 3334
PscI	ACATGT	1 cut(s)	724
PshBI	ATTAAT	1 cut(s)	1350
Psp1406I	AACGTT	1 cut(s)	1140
Psp6I	CCWGG	8 cut(s)	1737, 1828, 1916, 2118, 2217, 2773, 2888, 3208
PspFI	CCCAGC	1 cut(s)	3170
PspGI	CCWGG	8 cut(s)	1737, 1828, 1916, 2118, 2217, 2773, 2888, 3208
PspN4I	GGNNCC	5 cut(s)	1402, 1486, 1915, 2772, 3348
PspPI	GGNCC	8 cut(s)	649, 1084, 1485, 1533, 1877, 1920, 2090, 2770
PstI	CTGCAG	2 cut(s)	2329, 3328
PstNI	CAGNNNCTG	3 cut(s)	1334, 2035, 3371
PsuI	RGATCY	4 cut(s)	1189, 1384, 2221, 3112
PvuII	CAGCTG	3 cut(s)	1214, 1862, 3368
RsaI	GTAC	8 cut(s)	169, 487, 1128, 1203, 1645, 1666, 2176, 3497
RsaNI	GTAC	8 cut(s)	168, 486, 1127, 1202, 1644, 1665, 2175, 3496
RseI	CAYNNNNRTG	2 cut(s)	1287, 1805
SapI	GCTCTTC	1 cut(s)	1563
Sau96I	GGNCC	8 cut(s)	649, 1084, 1485, 1533, 1877, 1920, 2090, 2770
SchI	GAGTC	6 cut(s)	842, 1280, 1316, 2589, 2670, 3334
ScrFI	CCNGG	9 cut(s)	1739, 1830, 1918, 2120, 2219, 2775, 2890, 3210, 3335
SduI	GDGCHC	2 cut(s)	1911, 3280
SfaNI	GCATC	8 cut(s)	382, 1006, 1108, 1433, 1466, 2927, 3523, 3545
SfcI	CTRYAG	7 cut(s)	378, 978, 2229, 2325, 3220, 3324, 3356
SfuI	TTCGAA	1 cut(s)	2944
SinI	GGWCC	3 cut(s)	1485, 1877, 2090
SmiMI	CAYNNNNRTG	2 cut(s)	1287, 1805
SmlI	CTYRAG	5 cut(s)	431, 536, 992, 1721, 1967
SmoI	CTYRAG	5 cut(s)	431, 536, 992, 1721, 1967
SpeI	ACTAGT	3 cut(s)	1540, 1640, 2462
SsiI	CCGC	3 cut(s)	1488, 2778, 3474
SspI	AATATT	1 cut(s)	955
StyD4I	CCNGG	9 cut(s)	1737, 1828, 1916, 2118, 2217, 2773, 2888, 3208, 3333
StyI	CCWWGG	5 cut(s)	40, 789, 1419, 2493, 3108
TaaI	ACNGT	5 cut(s)	601, 1495, 2611, 3360, 3571
TaiI	ACGT	3 cut(s)	292, 570, 1143
TaqII	GACCGA	2 cut(s)	2747, 3470
TatI	WGTACW	2 cut(s)	1643, 2174
TscAI	CASTG	7 cut(s)	418, 1203, 1500, 1680, 2140, 2346, 3088
TseFI	GTSAC	4 cut(s)	2038, 2987, 3091, 3437
Tsp45I	GTSAC	4 cut(s)	2038, 2987, 3091, 3437
TspGWI	ACGGA	5 cut(s)	1869, 1889, 1926, 2194, 3263
TspRI	CASTG	7 cut(s)	418, 1203, 1500, 1680, 2140, 2346, 3088
Van91I	CCANNNNNTGG	1 cut(s)	2579
VneI	GTGCAC	1 cut(s)	1907
VpaK11BI	GGWCC	3 cut(s)	1485, 1877, 2090
VspI	ATTAAT	1 cut(s)	1350
XapI	RAATTY	5 cut(s)	175, 1824, 1866, 1931, 2540
XbaI	TCTAGA	2 cut(s)	2180, 3304
XceI	RCATGY	2 cut(s)	728, 3183
XcmI	CCANNNNNNNNNTGG	2 cut(s)	47, 2075
XmiI	GTMKAC	5 cut(s)	14, 2374, 2521, 2761, 3355
XmnI	GAANNNNTTC	3 cut(s)	630, 899, 2194
Zsp2I	ATGCAT	1 cut(s)	3538

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.