RLG00000017131

K( ) efflux antiporter 3

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
13128278 .. 13130097
1820 bp
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UTR
Exon/CDS
Intron
RLM00000017131

Sequence Viewer

Length: 516 bp
ATGGAGGCAGAGGGAAATGGTGAGAAAGGTGAAGAGAATGGTGCTTCTGTGAACAAGAAAGGTAGGAAAAAGGTGAAATTTGCGAAGGAAGGGGGAGAGAAAGGTGTTTTAGAAGTGGATAATGACAAGAAGCGCGATAGGAAGCGTGCGAAAACTGAGGAGGAAGATGGGAATAAGGGACATCTATCAACGGAGGAGCATAAAAAGGAGGTATCCCTAATGTGCCACCAATGTCAGAGGAATGATAATTTGGTGCAAAAAGTGCAGGACAAAGTGATATCGTGTTCCTTGCATAGAGAATTGCTACTTGCAGAGAAGGAGGGTTTAAAAGCTCTAGGTGGGCTGGGGCTTCTTTCTCTTGGAGGAAAATTAGTTCTTAGGCGAATTTTTGAGTTTGTGGCAGAAGCAAGGAGCTCAGAGGCATTTGTTGCCCTTTGCTTGCTGACGGTGGTGGGAACTTCACTTCTCACCCAGAAGTTGGGGTTCAGTGATACGGTTTATACGCAGATACTGTAA

Protein Analysis

172

Amino Acids

18.84

Weight (kDa)

8.61

Isoelectric Point (pI)

30.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 478
AccII CGCG 1 cut(s) 135
AcsI RAATTY 2 cut(s) 77, 384
AfiI CCNNNNNNNGG 1 cut(s) 478
AjuI GAANNNNNNNTTGG 2 cut(s) 233, 265
AloI GAACNNNNNNTCC 2 cut(s) 357, 389
AluBI AGCT 2 cut(s) 332, 414
AluI AGCT 2 cut(s) 332, 414
Alw21I GWGCWC 1 cut(s) 416
AlwNI CAGNNNCTG 1 cut(s) 511
ApoI RAATTY 2 cut(s) 77, 384
AspLEI GCGC 1 cut(s) 135
AsuHPI GGTGA 4 cut(s) 32, 41, 85, 460
BanII GRGCYC 1 cut(s) 416
Bbv12I GWGCWC 1 cut(s) 416
BccI CCATC 1 cut(s) 161
BciVI GTATCC 1 cut(s) 223
BfaI CTAG 1 cut(s) 335
BfuI GTATCC 1 cut(s) 223
Bsc4I CCNNNNNNNGG 1 cut(s) 478
BseLI CCNNNNNNNGG 1 cut(s) 478
BseMII CTCAG 2 cut(s) 147, 429
BseRI GAGGAG 2 cut(s) 173, 209
BseYI CCCAGC 1 cut(s) 343
BsgI GTGCAG 1 cut(s) 284
Bsh1236I CGCG 1 cut(s) 135
BsiHKAI GWGCWC 1 cut(s) 416
BslFI GGGAC 1 cut(s) 192
BslI CCNNNNNNNGG 1 cut(s) 478
BsmFI GGGAC 1 cut(s) 192
Bsp1286I GDGCHC 1 cut(s) 416
BspCNI CTCAG 2 cut(s) 148, 428
BspFNI CGCG 1 cut(s) 135
Bst4CI ACNGT 3 cut(s) 448, 496, 513
Bst6I CTCTTC 1 cut(s) 27
BstAPI GCANNNNNTGC 2 cut(s) 262, 428
BstC8I GCNNGC 2 cut(s) 147, 440
BstDEI CTNAG 3 cut(s) 156, 377, 415
BstFNI CGCG 1 cut(s) 135
BstHHI GCGC 1 cut(s) 135
BstMWI GCNNNNNNNGC 2 cut(s) 262, 428
BstUI CGCG 1 cut(s) 135
BsuI GTATCC 1 cut(s) 223
BtsIMutI CAGTG 1 cut(s) 493
Cac8I GCNNGC 2 cut(s) 147, 440
CaiI CAGNNNCTG 1 cut(s) 511
CfoI GCGC 1 cut(s) 135
CviJI RGCY 4 cut(s) 332, 343, 349, 414
CviKI_1 RGCY 4 cut(s) 332, 343, 349, 414
DdeI CTNAG 3 cut(s) 156, 377, 415
DraI TTTAAA 1 cut(s) 327
Eam1104I CTCTTC 1 cut(s) 27
EarI CTCTTC 1 cut(s) 27
Ecl136II GAGCTC 1 cut(s) 414
Eco24I GRGCYC 1 cut(s) 416
Eco32I GATATC 1 cut(s) 279
Eco53kI GAGCTC 1 cut(s) 414
EcoICRI GAGCTC 1 cut(s) 414
EcoRV GATATC 1 cut(s) 279
EcoT38I GRGCYC 1 cut(s) 416
FaiI YATR 3 cut(s) 201, 294, 501
FaqI GGGAC 1 cut(s) 192
FriOI GRGCYC 1 cut(s) 416
FspBI CTAG 1 cut(s) 335
GlaI GCGC 1 cut(s) 134
GsaI CCCAGC 1 cut(s) 347
HhaI GCGC 1 cut(s) 135
Hin6I GCGC 1 cut(s) 133
HinP1I GCGC 1 cut(s) 133
HphI GGTGA 4 cut(s) 32, 41, 85, 460
Hpy166II GTNNAC 1 cut(s) 52
Hpy188I TCNGA 2 cut(s) 237, 418
Hpy8I GTNNAC 1 cut(s) 52
HpyAV CCTTC 3 cut(s) 79, 83, 310
HpyCH4III ACNGT 3 cut(s) 448, 496, 513
HpyCH4V TGCA 4 cut(s) 256, 265, 292, 311
HpyF10VI GCNNNNNNNGC 2 cut(s) 262, 428
HpyF3I CTNAG 3 cut(s) 156, 377, 415
HspAI GCGC 1 cut(s) 133
LmnI GCTCC 2 cut(s) 196, 411
LpnPI CCDG 3 cut(s) 251, 329, 485
MaeI CTAG 1 cut(s) 335
MboII GAAGA 2 cut(s) 44, 176
MhlI GDGCHC 1 cut(s) 416
MluCI AATT 5 cut(s) 77, 247, 299, 368, 384
MnlI CCTC 9 cut(s) 4, 151, 154, 187, 202, 231, 313, 356, 412
MseI TTAA 1 cut(s) 326
MvnI CGCG 1 cut(s) 135
MwoI GCNNNNNNNGC 2 cut(s) 262, 428
PflMI CCANNNNNTGG 1 cut(s) 478
Psp124BI GAGCTC 1 cut(s) 416
PspFI CCCAGC 1 cut(s) 343
PstNI CAGNNNCTG 1 cut(s) 511
SacI GAGCTC 1 cut(s) 416
SaqAI TTAA 1 cut(s) 326
SduI GDGCHC 1 cut(s) 416
SetI ASST 8 cut(s) 31, 64, 75, 106, 213, 334, 340, 416
Sse9I AATT 5 cut(s) 77, 247, 299, 368, 384
SspMI CTAG 1 cut(s) 335
SstI GAGCTC 1 cut(s) 416
TaaI ACNGT 3 cut(s) 448, 496, 513
TasI AATT 5 cut(s) 77, 247, 299, 368, 384
Tru1I TTAA 1 cut(s) 326
Tru9I TTAA 1 cut(s) 326
TscAI CASTG 1 cut(s) 493
TspGWI ACGGA 1 cut(s) 206
TspRI CASTG 1 cut(s) 493
Van91I CCANNNNNTGG 1 cut(s) 478
XapI RAATTY 2 cut(s) 77, 384
XspI CTAG 1 cut(s) 335
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.