lysine-specific demethylase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G01790 AT1G01790 AT4G04850 AT4G04850 |
| fragaria_vesca | FvH4_2g11000 |
| malus_domestica | MD05G1050600.v1.1 MD10G1058200.v1.1 |
| prunus_persica | Prupe.8G077000_v2.0.a1 Prupe.8G077000_v2.0.a1 |
| pyrus_communis | pycom05g04260 pycom05g04270 pycom10g04490 |
| rosa_chinensis | RchiOBHm_Chr6g0269141 RchiOBHm_Chr6g0269211 RchiOBHm_Chr7g0201951 |
| rosa_laevigata | RLG00000017131 |
| rosa_multiflora | Rmu_co8385553.1_g000001 Rmu_sc0005353.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00238290 Rroxscaffold_7G00198940 |
| rosa_rugosa | Rorug05G0148000 Rorug05G0148100 Rorug06G0046600 Rorug06G0046600 |
| rosa_samantha | Rh4DG004100 Rh6AG166300 Rh6BG171900 Rh6CG164800 Rh6CG165400 Rh6DG156300 Rh6DG156400 Rh6DG157000 Rh7AG286500 |
| rosa_wichuraiana | Rw6G014360 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 2 cut(s) | 489, 738 |
| AciI | CCGC | 2 cut(s) | 43, 736 |
| AcuI | CTGAAG | 1 cut(s) | 90 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 730 |
| AgsI | TTSAA | 2 cut(s) | 716, 730 |
| AhlI | ACTAGT | 1 cut(s) | 703 |
| AjnI | CCWGG | 1 cut(s) | 223 |
| AluBI | AGCT | 1 cut(s) | 690 |
| AluI | AGCT | 1 cut(s) | 690 |
| Alw26I | GTCTC | 1 cut(s) | 750 |
| AoxI | GGCC | 3 cut(s) | 326, 548, 733 |
| ApeKI | GCWGC | 1 cut(s) | 687 |
| AspLEI | GCGC | 2 cut(s) | 489, 740 |
| AspS9I | GGNCC | 1 cut(s) | 733 |
| AsuHPI | GGTGA | 8 cut(s) | 104, 113, 170, 272, 305, 386, 439, 607 |
| BbvI | GCAGC | 1 cut(s) | 699 |
| BccI | CCATC | 6 cut(s) | 27, 92, 98, 257, 515, 653 |
| BciT130I | CCWGG | 1 cut(s) | 225 |
| BcoDI | GTCTC | 1 cut(s) | 750 |
| BcuI | ACTAGT | 1 cut(s) | 703 |
| BfaI | CTAG | 1 cut(s) | 704 |
| BisI | GCNGC | 3 cut(s) | 44, 688, 736 |
| BlsI | GCNGC | 3 cut(s) | 45, 689, 737 |
| Bme1390I | CCNGG | 1 cut(s) | 225 |
| BmgT120I | GGNCC | 1 cut(s) | 733 |
| BmrFI | CCNGG | 1 cut(s) | 225 |
| BpmI | CTGGAG | 1 cut(s) | 661 |
| BpuEI | CTTGAG | 1 cut(s) | 782 |
| BsaJI | CCNNGG | 1 cut(s) | 579 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 730 |
| Bse3DI | GCAATG | 2 cut(s) | 688, 755 |
| BseBI | CCWGG | 1 cut(s) | 225 |
| BseDI | CCNNGG | 1 cut(s) | 579 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 730 |
| BseMI | GCAATG | 2 cut(s) | 688, 755 |
| BseMII | CTCAG | 4 cut(s) | 111, 501, 545, 761 |
| BseRI | GAGGAG | 2 cut(s) | 527, 596 |
| BseXI | GCAGC | 1 cut(s) | 699 |
| Bsh1236I | CGCG | 2 cut(s) | 489, 738 |
| BshFI | GGCC | 3 cut(s) | 328, 550, 735 |
| BslFI | GGGAC | 1 cut(s) | 579 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 730 |
| BsmAI | GTCTC | 1 cut(s) | 750 |
| BsmFI | GGGAC | 1 cut(s) | 579 |
| BsmI | GAATGC | 1 cut(s) | 768 |
| BsnI | GGCC | 3 cut(s) | 328, 550, 735 |
| Bsp143I | GATC | 1 cut(s) | 178 |
| BspACI | CCGC | 2 cut(s) | 43, 736 |
| BspANI | GGCC | 3 cut(s) | 328, 550, 735 |
| BspCNI | CTCAG | 4 cut(s) | 112, 502, 546, 760 |
| BspFNI | CGCG | 2 cut(s) | 489, 738 |
| BsrDI | GCAATG | 2 cut(s) | 688, 755 |
| BssECI | CCNNGG | 1 cut(s) | 579 |
| BssMI | GATC | 1 cut(s) | 178 |
| Bst2UI | CCWGG | 1 cut(s) | 225 |
| Bst4CI | ACNGT | 1 cut(s) | 167 |
| Bst6I | CTCTTC | 4 cut(s) | 19, 227, 317, 438 |
| BstC8I | GCNNGC | 1 cut(s) | 501 |
| BstDEI | CTNAG | 5 cut(s) | 120, 510, 554, 621, 747 |
| BstFNI | CGCG | 2 cut(s) | 489, 738 |
| BstHHI | GCGC | 2 cut(s) | 489, 740 |
| BstKTI | GATC | 1 cut(s) | 181 |
| BstMAI | GTCTC | 1 cut(s) | 750 |
| BstMBI | GATC | 1 cut(s) | 178 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 687 |
| BstNI | CCWGG | 1 cut(s) | 225 |
| BstSCI | CCNGG | 1 cut(s) | 223 |
| BstUI | CGCG | 2 cut(s) | 489, 738 |
| BstV1I | GCAGC | 1 cut(s) | 699 |
| BsuRI | GGCC | 3 cut(s) | 328, 550, 735 |
| BtsI | GCAGTG | 1 cut(s) | 747 |
| BtsIMutI | CAGTG | 1 cut(s) | 747 |
| Cac8I | GCNNGC | 1 cut(s) | 501 |
| CfoI | GCGC | 2 cut(s) | 489, 740 |
| Cfr13I | GGNCC | 1 cut(s) | 733 |
| CviJI | RGCY | 7 cut(s) | 131, 223, 328, 537, 550, 690, 735 |
| CviKI_1 | RGCY | 7 cut(s) | 131, 223, 328, 537, 550, 690, 735 |
| DdeI | CTNAG | 5 cut(s) | 120, 510, 554, 621, 747 |
| DpnI | GATC | 1 cut(s) | 180 |
| DpnII | GATC | 1 cut(s) | 178 |
| Eam1104I | CTCTTC | 4 cut(s) | 19, 227, 317, 438 |
| EarI | CTCTTC | 4 cut(s) | 19, 227, 317, 438 |
| Eco147I | AGGCCT | 2 cut(s) | 328, 550 |
| Eco57I | CTGAAG | 1 cut(s) | 90 |
| EcoRII | CCWGG | 1 cut(s) | 223 |
| FaiI | YATR | 6 cut(s) | 54, 308, 356, 608, 669, 671 |
| FaqI | GGGAC | 1 cut(s) | 579 |
| Fnu4HI | GCNGC | 3 cut(s) | 44, 688, 736 |
| Fsp4HI | GCNGC | 3 cut(s) | 44, 688, 736 |
| FspBI | CTAG | 1 cut(s) | 704 |
| GlaI | GCGC | 2 cut(s) | 488, 739 |
| GluI | GCNGC | 3 cut(s) | 44, 688, 736 |
| GsuI | CTGGAG | 1 cut(s) | 661 |
| HaeIII | GGCC | 3 cut(s) | 328, 550, 735 |
| HhaI | GCGC | 2 cut(s) | 489, 740 |
| Hin6I | GCGC | 2 cut(s) | 487, 738 |
| HinP1I | GCGC | 2 cut(s) | 487, 738 |
| HinfI | GANTC | 2 cut(s) | 610, 716 |
| HphI | GGTGA | 8 cut(s) | 104, 113, 170, 272, 305, 386, 439, 607 |
| Hpy166II | GTNNAC | 1 cut(s) | 406 |
| Hpy188I | TCNGA | 4 cut(s) | 121, 466, 555, 654 |
| Hpy8I | GTNNAC | 1 cut(s) | 406 |
| HpyAV | CCTTC | 6 cut(s) | 148, 222, 235, 433, 448, 724 |
| HpyCH4III | ACNGT | 1 cut(s) | 167 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 687 |
| HpyF3I | CTNAG | 5 cut(s) | 120, 510, 554, 621, 747 |
| HspAI | GCGC | 2 cut(s) | 487, 738 |
| Kzo9I | GATC | 1 cut(s) | 178 |
| LmnI | GCTCC | 3 cut(s) | 559, 583, 695 |
| LpnPI | CCDG | 7 cut(s) | 210, 237, 342, 548, 601, 691, 758 |
| Lsp1109I | GCAGC | 1 cut(s) | 699 |
| MaeI | CTAG | 1 cut(s) | 704 |
| MaeIII | GTNAC | 2 cut(s) | 427, 628 |
| MalI | GATC | 1 cut(s) | 180 |
| MboI | GATC | 1 cut(s) | 178 |
| MspR9I | CCNGG | 1 cut(s) | 225 |
| Mva1269I | GAATGC | 1 cut(s) | 768 |
| MvaI | CCWGG | 1 cut(s) | 225 |
| MvnI | CGCG | 2 cut(s) | 489, 738 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 687 |
| NdeII | GATC | 1 cut(s) | 178 |
| NmuCI | GTSAC | 2 cut(s) | 427, 628 |
| PceI | AGGCCT | 2 cut(s) | 328, 550 |
| PctI | GAATGC | 1 cut(s) | 768 |
| PfeI | GAWTC | 2 cut(s) | 610, 716 |
| PkrI | GCNGC | 3 cut(s) | 45, 689, 737 |
| Psp6I | CCWGG | 1 cut(s) | 223 |
| PspGI | CCWGG | 1 cut(s) | 223 |
| PspPI | GGNCC | 1 cut(s) | 733 |
| SatI | GCNGC | 3 cut(s) | 44, 688, 736 |
| Sau3AI | GATC | 1 cut(s) | 178 |
| Sau96I | GGNCC | 1 cut(s) | 733 |
| ScrFI | CCNGG | 1 cut(s) | 225 |
| SetI | ASST | 7 cut(s) | 282, 385, 429, 534, 597, 643, 692 |
| SmlI | CTYRAG | 1 cut(s) | 761 |
| SmoI | CTYRAG | 1 cut(s) | 761 |
| SpeI | ACTAGT | 1 cut(s) | 703 |
| SseBI | AGGCCT | 2 cut(s) | 328, 550 |
| SsiI | CCGC | 2 cut(s) | 43, 736 |
| SspMI | CTAG | 1 cut(s) | 704 |
| StuI | AGGCCT | 2 cut(s) | 328, 550 |
| StyD4I | CCNGG | 1 cut(s) | 223 |
| TaaI | ACNGT | 1 cut(s) | 167 |
| TauI | GCSGC | 2 cut(s) | 46, 738 |
| TfiI | GAWTC | 2 cut(s) | 610, 716 |
| TscAI | CASTG | 1 cut(s) | 747 |
| TseFI | GTSAC | 2 cut(s) | 427, 628 |
| TseI | GCWGC | 1 cut(s) | 687 |
| Tsp45I | GTSAC | 2 cut(s) | 427, 628 |
| TspGWI | ACGGA | 1 cut(s) | 349 |
| TspRI | CASTG | 1 cut(s) | 747 |
| XspI | CTAG | 1 cut(s) | 704 |