Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003895

Physical Location & Seq

Genomic Coordinates Forward (+)

2452664 .. 2457767

Gene Structure 5104 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G04850.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1914 bp

ATGGCAATTAGTACTATGTTAGGGTCCATCTCTTGTTGCCCCTCTCCCAAGGGGTATGAGATGGTGAAACAACATAGTGTTCGATTAAAGCATTGCGTTTTCACGGTGAAATCGAGTGTGCCTGTGTATTCGGAAGGCGTAAACGATGGGATTAAGTTGCATTCTTTTGGGAATTTAGTTAAAAAGAAGGTTTTTCTGGATACCTCTAAGAGATTCTATTTCCAAGGGAGATGGTCTGAATCGTCAGGGAGGAGAGTGGAGACTTATGCTGGAGTAGATGTAGCGAGTGCTGTTGATGTAATCAACGATCTTGGATTCGATACTTTGACCTTCTTGATGGTTACTGTTATTATTGTCCCTGCATTCAGAATTCTCAAAGCTAGTCCGATACTTGGTTTCTTCTTTGCTGGTGTTGTACTCAACCAATTTGGTTTGATTAGAAATCTCACAGATGTTAAAGTTCTTTCAGAATGGGGGATTCTTTTCCTGCTCTTTGAGATGGGTCTCGAGCTTTCACTTGCTCGTCTGAAAGCTCTTGCAAAATTTGCTTTTGGCATGGGACTAACTCAGGTTTTGTTATGCACGGCTGCATTCACTGCTTTTGAACTCCCACCAAATGGAGCCATCGGAACAAAAATTCTGGAATTCCTCTTTCATTCAAGGCCTGACTTGGTCAACATTAGAAGCATTGATGAGGCCGTTGTCATTGGCGCTGCTCTATCATTGTCATCTTCAGCTTTTGTTCTACAGCTTCTTGCAGAGAAAGGTGAGCTCCCTACAAGATTTGGCTCAGCAACCTTGGGAATTCTTCTTCTACAGGATATAGCTGTTGTGCCGTTACTAGTCATTCTTCCAGTGTTGGAAAGCCAGGATATTGGTGGGGAAAGCATATGGCCAATGCTTGCAAAAGAAAGTGCAAAGGCTCTTGGTGGGTTGGGCATCCTCTCTCTTGGAGGAAAGTTCTTTCTCCGTAGAATTTTCGAGGTTGTTGCAGAAACAAGAAGCTCAGAAGCTTTTGTGGCCCTTTGCCTTCTCACAGTTGCTGGGACTTCACTTGTGACTCAATGGCTTGGTTTCAGCGATACGCTTGGAGCTTTTCTTGCTGGAGCACTTCTAGCAGAAACAAATTTCCGAACACAAATTGAAGCTGATATTAGGCCATTTAGAGGTTTACTTCTCGGTTTGTTCTTTGTAACCACAGGAACTTCCATTGACATGGAGGTTCTGTTTCGAGAATGGCCTAATGTCCTCTCACTCTTGGGTGGTCTGATTGTGATCAAAACACTGATTATAACCGCAATCGGTCCCCGAGTTGGCCTCACAATACAAGAAAGCGTAAGAGTTGGCTTTCTTCTTTCCCAGGGAGGAGAATTTGCATTTGTTGTGTTCTCTCTAGCCAACAGGCTAGGAGTGCTTCCAAATGAGCTGAACAAACTGCTCATTATCGTAGTTGTTTTGTCTATGGCATTAACACCTTATCTTAACCAACTTGGAAGAAAAGCCGCCGATTTTCTTGATGAGAGACTTGATCCCGGAGAGAAAATAGGTGAAGATGTGAACTTCGATGTTAGTGAATCAATTGTCATCATTGGATTTGGACAAATGGGTCAGGTTCTGGCCAATTTTTTGTCAACGCCATTGGTCTCAGATAGTGATCTTGTGGGATGGCCTTATATTGGTTTTGATCTGAATCCTGCTGTAGTGAAGGAATCAAGGAAACTCGGTTTCCCGATATTGTATGGAGACGGATCTCGACCATCGGTTTTGCAATCTGCAGGGGTTTCATCTCCTAAAGCTATCATGATAATGTATAAAGGCAAGAAGAGAACCACTGAGGCTGTTCAAAGACTCCGTCTTGCCTTCCCCGGGGTTATTTCTCTCTTCCTTCTTCCTTTTGTCAATAAAATCGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006810 GO:0006811 GO:0006812 GO:0006996 GO:0008150 GO:0008324 GO:0009314 GO:0009416 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009628 GO:0009642 GO:0009643 GO:0009657 GO:0009658 GO:0009893 GO:0009987 GO:0010109 GO:0015075 GO:0015318 GO:0016020 GO:0016043 GO:0019222 GO:0022857 GO:0022890 GO:0031323 GO:0031325 GO:0031976 GO:0031984 GO:0034220 GO:0034357 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0055035 GO:0055085 GO:0065007 GO:0071840 GO:0098655 GO:1905157

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger TrkA_N

Protein Analysis

637

Amino Acids

69.05

Weight (kDa)

8.43

Isoelectric Point (pI)

34.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_H_Exchanger	PF00999	114 - 495	3.2e-71	Sodium/hydrogen exchanger, transmembrane
TrkA_N	PF02254	527 - 622	1.1e-10	TrkA-N domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003895)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01790 AT1G01790 AT4G04850 AT4G04850
fragaria_vesca	FvH4_2g11000
malus_domestica	MD05G1050600.v1.1 MD10G1058200.v1.1
prunus_persica	Prupe.8G077000_v2.0.a1 Prupe.8G077000_v2.0.a1
pyrus_communis	pycom05g04260 pycom05g04270 pycom10g04490
rosa_chinensis	RchiOBHm_Chr6g0269141 RchiOBHm_Chr6g0269211 RchiOBHm_Chr7g0201951
rosa_laevigata	RLG00000017131
rosa_multiflora	Rmu_co8385553.1_g000001 Rmu_sc0005353.1_g000001
rosa_roxburghii	Rroxscaffold_3G00238290 Rroxscaffold_7G00198940
rosa_rugosa	Rorug05G0148000 Rorug05G0148100 Rorug06G0046600 Rorug06G0046600
rosa_samantha	Rh4DG004100 Rh6AG166300 Rh6BG171900 Rh6CG164800 Rh6CG165400 Rh6DG156300 Rh6DG156400 Rh6DG157000 Rh7AG286500
rosa_wichuraiana	Rw6G014360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1292
AasI	GACNNNNNNGTC	1 cut(s)	1605
AccB7I	CCANNNNNTGG	1 cut(s)	617
AciI	CCGC	2 cut(s)	1296, 1503
AclWI	GGATC	2 cut(s)	1523, 1756
AcoI	YGGCCR	2 cut(s)	893, 1617
AcsI	RAATTY	9 cut(s)	172, 369, 542, 636, 644, 804, 975, 1126, 1370
AcuI	CTGAAG	1 cut(s)	717
AfaI	GTAC	2 cut(s)	13, 417
AfiI	CCNNNNNNNGG	6 cut(s)	392, 617, 1166, 1313, 1676, 1866
AgsI	TTSAA	4 cut(s)	605, 660, 1145, 1844
AhlI	ACTAGT	1 cut(s)	841
AjnI	CCWGG	2 cut(s)	867, 1359
Alw21I	GWGCWC	2 cut(s)	774, 1111
Alw26I	GTCTC	5 cut(s)	254, 509, 1516, 1648, 1737
AlwI	GGATC	2 cut(s)	1523, 1756
AlwNI	CAGNNNCTG	2 cut(s)	1043, 1615
Ama87I	CYCGRG	3 cut(s)	506, 1308, 1865
AoxI	GGCC	9 cut(s)	662, 696, 893, 1020, 1157, 1238, 1315, 1617, 1667
ApeKI	GCWGC	2 cut(s)	587, 713
ApoI	RAATTY	9 cut(s)	172, 369, 542, 636, 644, 804, 975, 1126, 1370
ArsI	GACNNNNNNTTYG	2 cut(s)	1837, 1869
AspLEI	GCGC	1 cut(s)	713
AspS9I	GGNCC	3 cut(s)	24, 1021, 1304
AsuC2I	CCSGG	3 cut(s)	1533, 1866, 1867
AsuHPI	GGTGA	4 cut(s)	76, 118, 779, 1559
AvaI	CYCGRG	3 cut(s)	506, 1308, 1865
AvaII	GGWCC	2 cut(s)	24, 1304
BalI	TGGCCA	2 cut(s)	895, 1619
BanII	GRGCYC	1 cut(s)	774
Bbv12I	GWGCWC	2 cut(s)	774, 1111
BbvI	GCAGC	2 cut(s)	574, 700
BccI	CCATC	9 cut(s)	35, 55, 140, 225, 331, 493, 632, 1659, 1765
BceAI	ACGGC	3 cut(s)	600, 683, 820
BcgI	CGANNNNNNTGC	2 cut(s)	971, 1005
BciT130I	CCWGG	2 cut(s)	869, 1361
BciVI	GTATCC	1 cut(s)	193
BclI	TGATCA	1 cut(s)	1275
BcnI	CCSGG	3 cut(s)	1533, 1866, 1867
BcoDI	GTCTC	5 cut(s)	254, 509, 1516, 1648, 1737
BcuI	ACTAGT	1 cut(s)	841
BfaI	CTAG	5 cut(s)	381, 842, 1115, 1394, 1406
BfmI	CTRYAG	4 cut(s)	746, 815, 1698, 1773
BfoI	RGCGCY	1 cut(s)	714
BfuI	GTATCC	1 cut(s)	193
BisI	GCNGC	3 cut(s)	588, 714, 1503
BlpI	GCTNAGC	1 cut(s)	790
BlsI	GCNGC	3 cut(s)	589, 715, 1504
BmcAI	AGTACT	1 cut(s)	13
Bme1390I	CCNGG	5 cut(s)	869, 1361, 1533, 1866, 1867
Bme18I	GGWCC	2 cut(s)	24, 1304
BmeT110I	CYCGRG	3 cut(s)	506, 1308, 1865
BmgT120I	GGNCC	3 cut(s)	24, 1021, 1304
BmiI	GGNNCC	3 cut(s)	25, 622, 1306
BmrFI	CCNGG	5 cut(s)	869, 1361, 1533, 1866, 1867
BmsI	GCATC	1 cut(s)	948
BplI	GAGNNNNNCTC	2 cut(s)	1302, 1334
BpmI	CTGGAG	2 cut(s)	291, 1125
Bpu1102I	GCTNAGC	1 cut(s)	790
BpuMI	CCSGG	3 cut(s)	1533, 1866, 1867
BsaBI	GATNNNNATC	3 cut(s)	1274, 1653, 1689
BsaI	GGTCTC	2 cut(s)	509, 1648
BsaJI	CCNNGG	8 cut(s)	48, 223, 798, 1359, 1360, 1864, 1865, 1866
BsaXI	ACNNNNNCTCC	4 cut(s)	264, 294, 1211, 1241
Bsc4I	CCNNNNNNNGG	6 cut(s)	392, 617, 1166, 1313, 1676, 1866
Bse1I	ACTGG	1 cut(s)	854
Bse3DI	GCAATG	1 cut(s)	91
Bse8I	GATNNNNATC	3 cut(s)	1274, 1653, 1689
BseBI	CCWGG	2 cut(s)	869, 1361
BseDI	CCNNGG	8 cut(s)	48, 223, 798, 1359, 1360, 1864, 1865, 1866
BseGI	GGATG	2 cut(s)	939, 1670
BseJI	GATNNNNATC	3 cut(s)	1274, 1653, 1689
BseLI	CCNNNNNNNGG	6 cut(s)	392, 617, 1166, 1313, 1676, 1866
BseMI	GCAATG	1 cut(s)	91
BseMII	CTCAG	5 cut(s)	581, 804, 1020, 1659, 1824
BseNI	ACTGG	1 cut(s)	854
BseRI	GAGGAG	2 cut(s)	265, 1380
BseXI	GCAGC	2 cut(s)	574, 700
BseYI	CCCAGC	1 cut(s)	1043
BshFI	GGCC	9 cut(s)	664, 698, 895, 1022, 1159, 1240, 1317, 1619, 1669
BsiHKAI	GWGCWC	2 cut(s)	774, 1111
BsiHKCI	CYCGRG	3 cut(s)	506, 1308, 1865
BsiSI	CCGG	2 cut(s)	1533, 1866
BslFI	GGGAC	4 cut(s)	341, 573, 1060, 1290
BslI	CCNNNNNNNGG	6 cut(s)	392, 617, 1166, 1313, 1676, 1866
BsmAI	GTCTC	5 cut(s)	254, 509, 1516, 1648, 1737
BsmBI	CGTCTC	1 cut(s)	1737
BsmFI	GGGAC	4 cut(s)	341, 573, 1060, 1290
BsmI	GAATGC	3 cut(s)	160, 362, 590
BsnI	GGCC	9 cut(s)	664, 698, 895, 1022, 1159, 1240, 1317, 1619, 1669
Bso31I	GGTCTC	2 cut(s)	509, 1648
BsoBI	CYCGRG	3 cut(s)	506, 1308, 1865
Bsp1286I	GDGCHC	2 cut(s)	774, 1111
Bsp143I	GATC	6 cut(s)	307, 1275, 1528, 1654, 1684, 1748
Bsp1720I	GCTNAGC	1 cut(s)	790
BspACI	CCGC	2 cut(s)	1296, 1503
BspANI	GGCC	9 cut(s)	664, 698, 895, 1022, 1159, 1240, 1317, 1619, 1669
BspCNI	CTCAG	5 cut(s)	580, 803, 1019, 1658, 1825
BspHI	TCATGA	1 cut(s)	1800
BspLI	GGNNCC	3 cut(s)	25, 622, 1306
BspMAI	CTGCAG	1 cut(s)	1777
BspPI	GGATC	2 cut(s)	1523, 1756
BspTNI	GGTCTC	2 cut(s)	509, 1648
BsrDI	GCAATG	1 cut(s)	91
BsrI	ACTGG	1 cut(s)	854
BssECI	CCNNGG	8 cut(s)	48, 223, 798, 1359, 1360, 1864, 1865, 1866
BssMI	GATC	6 cut(s)	307, 1275, 1528, 1654, 1684, 1748
BssT1I	CCWWGG	3 cut(s)	48, 223, 798
Bst2UI	CCWGG	2 cut(s)	869, 1361
Bst4CI	ACNGT	3 cut(s)	106, 346, 1039
Bst6I	CTCTTC	2 cut(s)	1817, 1886
BstAPI	GCANNNNNTGC	2 cut(s)	545, 596
BstC8I	GCNNGC	1 cut(s)	903
BstDEI	CTNAG	6 cut(s)	207, 567, 790, 1006, 1645, 1833
BstF5I	GGATG	2 cut(s)	939, 1670
BstH2I	RGCGCY	1 cut(s)	714
BstHHI	GCGC	1 cut(s)	713
BstKTI	GATC	6 cut(s)	310, 1278, 1531, 1657, 1687, 1751
BstMAI	GTCTC	5 cut(s)	254, 509, 1516, 1648, 1737
BstMBI	GATC	6 cut(s)	307, 1275, 1528, 1654, 1684, 1748
BstMWI	GCNNNNNNNGC	6 cut(s)	545, 596, 1019, 1100, 1115, 1411
BstNI	CCWGG	2 cut(s)	869, 1361
BstSCI	CCNGG	5 cut(s)	867, 1359, 1531, 1864, 1865
BstSFI	CTRYAG	4 cut(s)	746, 815, 1698, 1773
BstV1I	GCAGC	2 cut(s)	574, 700
BstX2I	RGATCY	1 cut(s)	1748
BstXI	CCANNNNNNTGG	2 cut(s)	875, 1216
BstYI	RGATCY	1 cut(s)	1748
BsuI	GTATCC	1 cut(s)	193
BsuRI	GGCC	9 cut(s)	664, 698, 895, 1022, 1159, 1240, 1317, 1619, 1669
BtsCI	GGATG	2 cut(s)	939, 1670
BtsI	GCAGTG	1 cut(s)	594
BtsIMutI	CAGTG	4 cut(s)	594, 861, 1283, 1830
Cac8I	GCNNGC	1 cut(s)	903
CaiI	CAGNNNCTG	2 cut(s)	1043, 1615
CciI	TCATGA	1 cut(s)	1800
CfoI	GCGC	1 cut(s)	713
Cfr13I	GGNCC	3 cut(s)	24, 1021, 1304
Cfr9I	CCCGGG	1 cut(s)	1865
Csp6I	GTAC	2 cut(s)	12, 416
CviAII	CATG	3 cut(s)	556, 1216, 1801
CviQI	GTAC	2 cut(s)	12, 416
DdeI	CTNAG	6 cut(s)	207, 567, 790, 1006, 1645, 1833
DpnI	GATC	6 cut(s)	309, 1277, 1530, 1656, 1686, 1750
DpnII	GATC	6 cut(s)	307, 1275, 1528, 1654, 1684, 1748
DrdI	GACNNNNNNGTC	1 cut(s)	1605
DseDI	GACNNNNNNGTC	1 cut(s)	1605
EaeI	YGGCCR	2 cut(s)	893, 1617
Eam1104I	CTCTTC	2 cut(s)	1817, 1886
EarI	CTCTTC	2 cut(s)	1817, 1886
Ecl136II	GAGCTC	1 cut(s)	772
Eco130I	CCWWGG	3 cut(s)	48, 223, 798
Eco147I	AGGCCT	1 cut(s)	664
Eco24I	GRGCYC	1 cut(s)	774
Eco31I	GGTCTC	2 cut(s)	509, 1648
Eco47I	GGWCC	2 cut(s)	24, 1304
Eco53kI	GAGCTC	1 cut(s)	772
Eco57I	CTGAAG	1 cut(s)	717
Eco88I	CYCGRG	3 cut(s)	506, 1308, 1865
EcoICRI	GAGCTC	1 cut(s)	772
EcoRI	GAATTC	3 cut(s)	369, 644, 804
EcoRII	CCWGG	2 cut(s)	867, 1359
EcoT14I	CCWWGG	3 cut(s)	48, 223, 798
EcoT38I	GRGCYC	1 cut(s)	774
ErhI	CCWWGG	3 cut(s)	48, 223, 798
Esp3I	CGTCTC	1 cut(s)	1737
FaeI	CATG	3 cut(s)	559, 1219, 1804
FaqI	GGGAC	4 cut(s)	341, 573, 1060, 1290
FatI	CATG	3 cut(s)	555, 1215, 1800
FauNDI	CATATG	1 cut(s)	890
FbaI	TGATCA	1 cut(s)	1275
Fnu4HI	GCNGC	3 cut(s)	588, 714, 1503
FokI	GGATG	2 cut(s)	926, 1677
FriOI	GRGCYC	1 cut(s)	774
Fsp4HI	GCNGC	3 cut(s)	588, 714, 1503
FspBI	CTAG	5 cut(s)	381, 842, 1115, 1394, 1406
GlaI	GCGC	1 cut(s)	712
GluI	GCNGC	3 cut(s)	588, 714, 1503
GsaI	CCCAGC	1 cut(s)	1047
GsuI	CTGGAG	2 cut(s)	291, 1125
HaeII	RGCGCY	1 cut(s)	714
HaeIII	GGCC	9 cut(s)	664, 698, 895, 1022, 1159, 1240, 1317, 1619, 1669
HapII	CCGG	2 cut(s)	1533, 1866
HhaI	GCGC	1 cut(s)	713
Hin1II	CATG	3 cut(s)	559, 1219, 1804
Hin6I	GCGC	1 cut(s)	711
HinP1I	GCGC	1 cut(s)	711
HincII	GTYRAC	2 cut(s)	676, 1632
HindII	GTYRAC	2 cut(s)	676, 1632
HindIII	AAGCTT	1 cut(s)	1011
HinfI	GANTC	9 cut(s)	213, 239, 315, 478, 1060, 1574, 1690, 1709, 1848
HpaII	CCGG	2 cut(s)	1533, 1866
HphI	GGTGA	4 cut(s)	76, 118, 779, 1559
Hpy166II	GTNNAC	5 cut(s)	142, 676, 1172, 1558, 1632
Hpy188III	TCNNGA	9 cut(s)	197, 334, 506, 641, 1232, 1514, 1729, 1752, 1801
Hpy8I	GTNNAC	5 cut(s)	142, 676, 1172, 1558, 1632
HpyAV	CCTTC	7 cut(s)	128, 181, 340, 1040, 1699, 1870, 1895
HpyCH4III	ACNGT	3 cut(s)	106, 346, 1039
HpyF10VI	GCNNNNNNNGC	6 cut(s)	545, 596, 1019, 1100, 1115, 1411
HpyF3I	CTNAG	6 cut(s)	207, 567, 790, 1006, 1645, 1833
Hsp92II	CATG	3 cut(s)	559, 1219, 1804
HspAI	GCGC	1 cut(s)	711
Ksp22I	TGATCA	1 cut(s)	1275
Kzo9I	GATC	6 cut(s)	307, 1275, 1528, 1654, 1684, 1748
LmnI	GCTCC	4 cut(s)	620, 777, 1091, 1106
Lsp1109I	GCAGC	2 cut(s)	574, 700
LweI	GCATC	1 cut(s)	948
MaeI	CTAG	5 cut(s)	381, 842, 1115, 1394, 1406
MaeIII	GTNAC	4 cut(s)	340, 837, 1057, 1192
MalI	GATC	6 cut(s)	309, 1277, 1530, 1656, 1686, 1750
MboI	GATC	6 cut(s)	307, 1275, 1528, 1654, 1684, 1748
MfeI	CAATTG	1 cut(s)	1578
MflI	RGATCY	1 cut(s)	1748
MhlI	GDGCHC	2 cut(s)	774, 1111
MlsI	TGGCCA	2 cut(s)	895, 1619
MluNI	TGGCCA	2 cut(s)	895, 1619
MlyI	GAGTC	2 cut(s)	1054, 1842
MmeI	TCCRAC	1 cut(s)	840
Mox20I	TGGCCA	2 cut(s)	895, 1619
MscI	TGGCCA	2 cut(s)	895, 1619
MseI	TTAA	6 cut(s)	86, 153, 180, 456, 1469, 1482
MslI	CAYNNNNRTG	2 cut(s)	1214, 1805
Msp20I	TGGCCA	2 cut(s)	895, 1619
MspI	CCGG	2 cut(s)	1533, 1866
MspR9I	CCNGG	5 cut(s)	869, 1361, 1533, 1866, 1867
MunI	CAATTG	1 cut(s)	1578
Mva1269I	GAATGC	3 cut(s)	160, 362, 590
MvaI	CCWGG	2 cut(s)	869, 1361
MwoI	GCNNNNNNNGC	6 cut(s)	545, 596, 1019, 1100, 1115, 1411
NciI	CCSGG	3 cut(s)	1533, 1866, 1867
NdeI	CATATG	1 cut(s)	890
NdeII	GATC	6 cut(s)	307, 1275, 1528, 1654, 1684, 1748
NlaIII	CATG	3 cut(s)	559, 1219, 1804
NlaIV	GGNNCC	3 cut(s)	25, 622, 1306
NmuCI	GTSAC	1 cut(s)	1057
PaeR7I	CTCGAG	1 cut(s)	506
PagI	TCATGA	1 cut(s)	1800
PasI	CCCWGGG	1 cut(s)	1360
PceI	AGGCCT	1 cut(s)	664
PcsI	WCGNNNNNNNCGW	1 cut(s)	110
PctI	GAATGC	3 cut(s)	160, 362, 590
PfeI	GAWTC	7 cut(s)	213, 239, 315, 478, 1574, 1690, 1709
PflFI	GACNNNGTC	2 cut(s)	671, 1851
PflMI	CCANNNNNTGG	1 cut(s)	617
PfoI	TCCNGGA	1 cut(s)	1531
PkrI	GCNGC	3 cut(s)	589, 715, 1504
PleI	GAGTC	2 cut(s)	1054, 1842
PpsI	GAGTC	2 cut(s)	1054, 1842
PsiI	TTATAA	1 cut(s)	1292
Psp124BI	GAGCTC	1 cut(s)	774
Psp6I	CCWGG	2 cut(s)	867, 1359
PspFI	CCCAGC	1 cut(s)	1043
PspGI	CCWGG	2 cut(s)	867, 1359
PspN4I	GGNNCC	3 cut(s)	25, 622, 1306
PspPI	GGNCC	3 cut(s)	24, 1021, 1304
PstI	CTGCAG	1 cut(s)	1777
PstNI	CAGNNNCTG	2 cut(s)	1043, 1615
PsuI	RGATCY	1 cut(s)	1748
PsyI	GACNNNGTC	2 cut(s)	671, 1851
RsaI	GTAC	2 cut(s)	13, 417
RsaNI	GTAC	2 cut(s)	12, 416
RseI	CAYNNNNRTG	2 cut(s)	1214, 1805
SacI	GAGCTC	1 cut(s)	774
SaqAI	TTAA	6 cut(s)	86, 153, 180, 456, 1469, 1482
SatI	GCNGC	3 cut(s)	588, 714, 1503
Sau3AI	GATC	6 cut(s)	307, 1275, 1528, 1654, 1684, 1748
Sau96I	GGNCC	3 cut(s)	24, 1021, 1304
ScaI	AGTACT	1 cut(s)	13
SchI	GAGTC	2 cut(s)	1054, 1842
ScrFI	CCNGG	5 cut(s)	869, 1361, 1533, 1866, 1867
SduI	GDGCHC	2 cut(s)	774, 1111
SfaNI	GCATC	1 cut(s)	948
SfcI	CTRYAG	4 cut(s)	746, 815, 1698, 1773
Sfr274I	CTCGAG	1 cut(s)	506
SinI	GGWCC	2 cut(s)	24, 1304
SlaI	CTCGAG	1 cut(s)	506
SmaI	CCCGGG	1 cut(s)	1867
SmiMI	CAYNNNNRTG	2 cut(s)	1214, 1805
SmlI	CTYRAG	1 cut(s)	506
SmoI	CTYRAG	1 cut(s)	506
SpeI	ACTAGT	1 cut(s)	841
SseBI	AGGCCT	1 cut(s)	664
SsiI	CCGC	2 cut(s)	1296, 1503
SspMI	CTAG	5 cut(s)	381, 842, 1115, 1394, 1406
SstI	GAGCTC	1 cut(s)	774
StuI	AGGCCT	1 cut(s)	664
StyD4I	CCNGG	5 cut(s)	867, 1359, 1531, 1864, 1865
StyI	CCWWGG	3 cut(s)	48, 223, 798
TaaI	ACNGT	3 cut(s)	106, 346, 1039
TaqI	TCGA	8 cut(s)	82, 113, 318, 507, 981, 1231, 1563, 1753
TaqII	GACCGA	1 cut(s)	1292
TatI	WGTACW	2 cut(s)	11, 415
TauI	GCSGC	1 cut(s)	1505
TfiI	GAWTC	7 cut(s)	213, 239, 315, 478, 1574, 1690, 1709
Tru1I	TTAA	6 cut(s)	86, 153, 180, 456, 1469, 1482
Tru9I	TTAA	6 cut(s)	86, 153, 180, 456, 1469, 1482
TscAI	CASTG	4 cut(s)	601, 861, 1290, 1837
TseFI	GTSAC	1 cut(s)	1057
TseI	GCWGC	2 cut(s)	587, 713
Tsp45I	GTSAC	1 cut(s)	1057
TspDTI	ATGAA	2 cut(s)	644, 1773
TspGWI	ACGGA	3 cut(s)	959, 1761, 1841
TspMI	CCCGGG	1 cut(s)	1865
TspRI	CASTG	4 cut(s)	601, 861, 1290, 1837
Tth111I	GACNNNGTC	2 cut(s)	671, 1851
Van91I	CCANNNNNTGG	1 cut(s)	617
VpaK11BI	GGWCC	2 cut(s)	24, 1304
XapI	RAATTY	9 cut(s)	172, 369, 542, 636, 644, 804, 975, 1126, 1370
XcmI	CCANNNNNNNNNTGG	1 cut(s)	875
XhoI	CTCGAG	1 cut(s)	506
XmaI	CCCGGG	1 cut(s)	1865
XspI	CTAG	5 cut(s)	381, 842, 1115, 1394, 1406
ZrmI	AGTACT	1 cut(s)	13

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.