Rh6DG156400

efflux antiporter 3

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
Physical Location & Seq
Reverse (-)
23460579 .. 23466187
5609 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG156400.1

Sequence Viewer

Length: 171 bp
ATGGCTCTACTGCTTTATGTGCTCATTCTCCGACATGAGCTCGTCAATCTCAGACCTGAGCCGGCTCGAGCTCGTTCTCCGACCGCCACCAACGTCAATATCAGAAGCGTTGATGAAGCAATAGTGATTGGTGCTGCTCTATCTTTATCTTCCTCAGCTTTTGTACTGTAG

Protein Analysis

56

Amino Acids

6.04

Weight (kDa)

8.51

Isoelectric Point (pI)

69.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 84
AfaI GTAC 1 cut(s) 165
AluBI AGCT 3 cut(s) 40, 71, 158
AluI AGCT 3 cut(s) 40, 71, 158
Alw21I GWGCWC 3 cut(s) 24, 42, 73
Ama87I CYCGRG 1 cut(s) 66
ApeKI GCWGC 1 cut(s) 134
AvaI CYCGRG 1 cut(s) 66
BanII GRGCYC 2 cut(s) 42, 73
Bbv12I GWGCWC 3 cut(s) 24, 42, 73
BbvCI CCTCAGC 1 cut(s) 154
BbvI GCAGC 1 cut(s) 121
BfmI CTRYAG 1 cut(s) 167
BisI GCNGC 1 cut(s) 135
BlsI GCNGC 1 cut(s) 136
BmeT110I CYCGRG 1 cut(s) 66
Bpu10I CCTNAGC 2 cut(s) 57, 154
Bse118I RCCGGY 1 cut(s) 61
BseMII CTCAG 3 cut(s) 48, 64, 168
BseXI GCAGC 1 cut(s) 121
Bsh1285I CGRYCG 1 cut(s) 84
BsiEI CGRYCG 1 cut(s) 84
BsiHKAI GWGCWC 3 cut(s) 24, 42, 73
BsiHKCI CYCGRG 1 cut(s) 66
BsiSI CCGG 1 cut(s) 62
BsoBI CYCGRG 1 cut(s) 66
Bsp1286I GDGCHC 3 cut(s) 24, 42, 73
BspACI CCGC 1 cut(s) 84
BspCNI CTCAG 3 cut(s) 49, 63, 167
BsrFI RCCGGY 1 cut(s) 61
BssAI RCCGGY 1 cut(s) 61
Bst4CI ACNGT 1 cut(s) 168
BstC8I GCNNGC 1 cut(s) 63
BstDEI CTNAG 3 cut(s) 50, 57, 154
BstMCI CGRYCG 1 cut(s) 84
BstMWI GCNNNNNNNGC 1 cut(s) 19
BstSFI CTRYAG 1 cut(s) 167
BstV1I GCAGC 1 cut(s) 121
Cac8I GCNNGC 1 cut(s) 63
Cfr10I RCCGGY 1 cut(s) 61
Csp6I GTAC 1 cut(s) 164
CviAII CATG 1 cut(s) 35
CviJI RGCY 6 cut(s) 5, 40, 61, 65, 71, 158
CviKI_1 RGCY 6 cut(s) 5, 40, 61, 65, 71, 158
CviQI GTAC 1 cut(s) 164
DdeI CTNAG 3 cut(s) 50, 57, 154
Ecl136II GAGCTC 2 cut(s) 40, 71
Eco24I GRGCYC 2 cut(s) 42, 73
Eco53kI GAGCTC 2 cut(s) 40, 71
Eco88I CYCGRG 1 cut(s) 66
EcoICRI GAGCTC 2 cut(s) 40, 71
EcoT38I GRGCYC 2 cut(s) 42, 73
FaeI CATG 1 cut(s) 38
FaiI YATR 2 cut(s) 18, 36
FatI CATG 1 cut(s) 34
Fnu4HI GCNGC 1 cut(s) 135
FriOI GRGCYC 2 cut(s) 42, 73
Fsp4HI GCNGC 1 cut(s) 135
GluI GCNGC 1 cut(s) 135
HapII CCGG 1 cut(s) 62
Hin1II CATG 1 cut(s) 38
HpaII CCGG 1 cut(s) 62
Hpy188I TCNGA 4 cut(s) 32, 53, 81, 104
HpyCH4III ACNGT 1 cut(s) 168
HpyCH4IV ACGT 1 cut(s) 93
HpyF10VI GCNNNNNNNGC 1 cut(s) 19
HpyF3I CTNAG 3 cut(s) 50, 57, 154
HpySE526I ACGT 1 cut(s) 93
Hsp92II CATG 1 cut(s) 38
KroI GCCGGC 1 cut(s) 61
KroNI GCCGGC 1 cut(s) 63
LpnPI CCDG 2 cut(s) 69, 75
Lsp1109I GCAGC 1 cut(s) 121
MaeII ACGT 1 cut(s) 93
MboII GAAGA 1 cut(s) 141
MhlI GDGCHC 3 cut(s) 24, 42, 73
MmeI TCCRAC 2 cut(s) 55, 104
MnlI CCTC 1 cut(s) 163
MroNI GCCGGC 1 cut(s) 61
MspI CCGG 1 cut(s) 62
MwoI GCNNNNNNNGC 1 cut(s) 19
NaeI GCCGGC 1 cut(s) 63
NgoMIV GCCGGC 1 cut(s) 61
NlaIII CATG 1 cut(s) 38
PaeR7I CTCGAG 1 cut(s) 66
PdiI GCCGGC 1 cut(s) 63
PkrI GCNGC 1 cut(s) 136
Psp124BI GAGCTC 2 cut(s) 42, 73
PspXI VCTCGAGB 1 cut(s) 66
RsaI GTAC 1 cut(s) 165
RsaNI GTAC 1 cut(s) 164
SacI GAGCTC 2 cut(s) 42, 73
SatI GCNGC 1 cut(s) 135
SduI GDGCHC 3 cut(s) 24, 42, 73
SetI ASST 5 cut(s) 42, 58, 73, 96, 160
SfcI CTRYAG 1 cut(s) 167
Sfr274I CTCGAG 1 cut(s) 66
SgeI CNNG 7 cut(s) 47, 53, 68, 74, 78, 80, 84
SlaI CTCGAG 1 cut(s) 66
SmlI CTYRAG 1 cut(s) 66
SmoI CTYRAG 1 cut(s) 66
SsiI CCGC 1 cut(s) 84
SstI GAGCTC 2 cut(s) 42, 73
TaaI ACNGT 1 cut(s) 168
TaiI ACGT 1 cut(s) 96
TaqI TCGA 1 cut(s) 67
TatI WGTACW 1 cut(s) 163
TseI GCWGC 1 cut(s) 134
TspDTI ATGAA 1 cut(s) 129
XhoI CTCGAG 1 cut(s) 66
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.