Rh4DG004100

K( ) efflux antiporter 3

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
Physical Location & Seq
Forward (+)
636544 .. 642139
5596 bp
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UTR
Exon/CDS
Intron
Rh4DG004100.1

Sequence Viewer

Length: 348 bp
ATGACATTCAAGGTGATTACTTTAAACTCAATTTTGAGGACTCAGGGGATACATGAGAAACTTTTAAAACCCAAGACCTCGGAATTGGTCAATATCAGAAGCGTTGATGAAGCAGTAGTGATTGGTGCTGCTCTATCTTTATCTTCCTCAGCTTTTGATATAGCAGTCGTACCTCTCTTAGTCATACTTCTGGTGCTGGAAAGCCAGAACATAGCGGAGGACAGTATATGGCCAATGCTTTTGAAGGAGGGTTTAAAAGCTCTAGGTGGGCTGGGGCTTCTTTCTCTTGGAGGAAAATTAGTTCTTAGGCGAATTTTTGAGGTGTGTGCTAAGAATAATAGGGTTTAA

Protein Analysis

115

Amino Acids

12.43

Weight (kDa)

9.3

Isoelectric Point (pI)

40.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 215
AcoI YGGCCR 1 cut(s) 230
AcsI RAATTY 1 cut(s) 312
AfaI GTAC 1 cut(s) 171
AgsI TTSAA 2 cut(s) 10, 244
AloI GAACNNNNNNTCC 2 cut(s) 285, 317
AluBI AGCT 2 cut(s) 152, 260
AluI AGCT 2 cut(s) 152, 260
AoxI GGCC 1 cut(s) 230
ApeKI GCWGC 1 cut(s) 128
ApoI RAATTY 1 cut(s) 312
AsuHPI GGTGA 1 cut(s) 25
BalI TGGCCA 1 cut(s) 232
BbvCI CCTCAGC 1 cut(s) 148
BbvI GCAGC 1 cut(s) 115
BciVI GTATCC 1 cut(s) 42
BfaI CTAG 1 cut(s) 263
BfuI GTATCC 1 cut(s) 42
BisI GCNGC 1 cut(s) 129
BlsI GCNGC 1 cut(s) 130
Bpu10I CCTNAGC 1 cut(s) 148
BsaJI CCNNGG 1 cut(s) 78
BseDI CCNNGG 1 cut(s) 78
BseMII CTCAG 2 cut(s) 56, 162
BseXI GCAGC 1 cut(s) 115
BseYI CCCAGC 1 cut(s) 271
BshFI GGCC 1 cut(s) 232
BsnI GGCC 1 cut(s) 232
BspACI CCGC 1 cut(s) 215
BspANI GGCC 1 cut(s) 232
BspCNI CTCAG 2 cut(s) 55, 161
BssECI CCNNGG 1 cut(s) 78
Bst4CI ACNGT 1 cut(s) 224
BstDEI CTNAG 5 cut(s) 42, 148, 178, 305, 330
BstV1I GCAGC 1 cut(s) 115
BsuI GTATCC 1 cut(s) 42
BsuRI GGCC 1 cut(s) 232
Csp6I GTAC 1 cut(s) 170
CviAII CATG 1 cut(s) 53
CviJI RGCY 6 cut(s) 152, 204, 232, 260, 271, 277
CviKI_1 RGCY 6 cut(s) 152, 204, 232, 260, 271, 277
CviQI GTAC 1 cut(s) 170
DdeI CTNAG 5 cut(s) 42, 148, 178, 305, 330
DraI TTTAAA 3 cut(s) 24, 66, 255
EaeI YGGCCR 1 cut(s) 230
FaeI CATG 1 cut(s) 56
FaiI YATR 6 cut(s) 54, 161, 185, 212, 227, 229
FatI CATG 1 cut(s) 52
Fnu4HI GCNGC 1 cut(s) 129
Fsp4HI GCNGC 1 cut(s) 129
FspBI CTAG 1 cut(s) 263
GluI GCNGC 1 cut(s) 129
GsaI CCCAGC 1 cut(s) 275
HaeIII GGCC 1 cut(s) 232
Hin1II CATG 1 cut(s) 56
HinfI GANTC 1 cut(s) 40
HphI GGTGA 1 cut(s) 25
Hpy188I TCNGA 2 cut(s) 82, 98
HpyAV CCTTC 1 cut(s) 238
HpyCH4III ACNGT 1 cut(s) 224
HpyF3I CTNAG 5 cut(s) 42, 148, 178, 305, 330
Hsp92II CATG 1 cut(s) 56
LpnPI CCDG 5 cut(s) 29, 176, 182, 218, 257
Lsp1109I GCAGC 1 cut(s) 115
MaeI CTAG 1 cut(s) 263
MboII GAAGA 1 cut(s) 135
MlsI TGGCCA 1 cut(s) 232
MluCI AATT 4 cut(s) 30, 83, 296, 312
MluNI TGGCCA 1 cut(s) 232
MlyI GAGTC 1 cut(s) 34
MnlI CCTC 8 cut(s) 30, 88, 157, 183, 211, 241, 284, 313
Mox20I TGGCCA 1 cut(s) 232
MscI TGGCCA 1 cut(s) 232
MseI TTAA 4 cut(s) 23, 65, 254, 346
Msp20I TGGCCA 1 cut(s) 232
NlaIII CATG 1 cut(s) 56
PkrI GCNGC 1 cut(s) 130
PleI GAGTC 1 cut(s) 34
PpsI GAGTC 1 cut(s) 34
PspFI CCCAGC 1 cut(s) 271
RsaI GTAC 1 cut(s) 171
RsaNI GTAC 1 cut(s) 170
SaqAI TTAA 4 cut(s) 23, 65, 254, 346
SatI GCNGC 1 cut(s) 129
SchI GAGTC 1 cut(s) 34
SetI ASST 7 cut(s) 15, 80, 154, 175, 262, 268, 324
Sse9I AATT 4 cut(s) 30, 83, 296, 312
SsiI CCGC 1 cut(s) 215
SspMI CTAG 1 cut(s) 263
TaaI ACNGT 1 cut(s) 224
TasI AATT 4 cut(s) 30, 83, 296, 312
Tru1I TTAA 4 cut(s) 23, 65, 254, 346
Tru9I TTAA 4 cut(s) 23, 65, 254, 346
TseI GCWGC 1 cut(s) 128
TspDTI ATGAA 1 cut(s) 123
XapI RAATTY 1 cut(s) 312
XspI CTAG 1 cut(s) 263
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.