Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0003895

Physical Location & Seq

Genomic Coordinates Reverse (-)

9642424 .. 9653588

Gene Structure 11165 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g11000.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2460 bp

ATGTTGGAGTCAGTGACTTGTTTCGGAAGCTATAAGGGATACGGCATTATCAAACAGAAGAGCTCATTTATGGCTTGCTCCATAGGCACATCACGGTTCTGTGGGCAATTGTTCAGTCCTTATTTTAGTAATCAGCAAGTGCGCTCATTGTCATATGCCAATAAGTACAAGATAAGACATAGTCCTTTTGTTGCAAAAAGTCTCATTCAAGGCAATTCTTTGTCAATTTCCTCTGTATATTGGTGGCGAGGACTTTATTTCTCAAACCATAGACCAGGCCATTCAGCAAGATGGAGGATATGTGCAACACTTGATGTTGCCAGCGCTCTTGATGTCATTAATGATTTAGGATTTGATACTTTGACGTTCTTAGCTGTGACTGTTCTGGTTGTTCCCGCATTCAAGATCATCAAAGCTAGCCCTATACTCGGTTTCTTCTTCGCGGGGATTGTACTCAATCAGTTTGGCTTGATACGGAATCTCACAGATGTCAAAGTTTTGTCAGAATGGGGGATTCTTTTTCTGCTATTTGAGATGGGATTAGAGCTTTCATTTTCACGTCTAAAGGCTCTTGCAAAATTTGCCTTCGGTATGGGATTAACTCAGGTCGTATTATCTACTCTTGCTTTCACAGCGTTTGAACTTCCTCCTAACGGGGCTATTGGAACACAAATTTTGACGTTCCTCTTTAACTCACGGCCTGATCTGGTCAATATCAGAAGCATTGATGAAGCAGTAGTGATTGGTGCTGCTCTATCTCTATCTTCTTCAGCTTTTGTACTGCAGCTACTTGCAGAGAAAGGTGAACTCCCTACAAGATTTGGTTCAGCAACTCTTGGGATACTTCTTTTACAGGATATAGCAGTTGTACCTCTCTTAGTCATACTTCCAGTGCTGGAAAGCCAGAACATAGCGGAGGAAAGTATATGGCCAATGCTTTTGAAGGAGAGTTTAAAAGCTCTAGGTGGGCTTGGGCTTCTTTCTCTTGGAGGGAAATTAGTTCTAAGGCGAATTTTTGAGTTTGTGGCAGAAGCAAGGAGTTCAGAGGCATTTGTTGCGCTTTGCTTGCTGACGGTGGCAGGGACTTCTCTTCTCACTCAGAAATTGGGGTTCAGTGACACGCTTGGAGCATTTTTGGCTGGAGCACTGCTAGCAGAAACAAATTTCAGGACACAAATTGAAGCCGATATAAGGCCATTTCGAGGCCTACTTCTGGGGTTATTTTTTGTAACTACAGGGACGTCCATTGACACGCAGGTTCTTTTCCGAGAGTGGCCGAATGTGCTTTCGCTCTTGGCAGGTTTGATAGTCATCAAGACGCTGATCATAACAGCCATAGGCCCCCGTGTTGGACTCACTTTACAAGAAAGTGTAAGAATAGGATTGCTTTTGTCTCAAGGAGGGGAGTTTGGCTTTGTAGTCTTTTCTCTTGCAAACAGGCTTGGTGTGCTACCACTTGAGCTTAACAAGTTGCTCATTATTGTTGTTGTCCTGTCAATGGCATTAACCCCGTTGCTTAATGAAGCTGGAAGAAGAGCGGCTGCATTTATTGATGAAAATTTTGAAGCAGAGGATAAAGTTCCTGATGTGGTGAATTTCAATTCAAGTGAACCTATTGTTATTCTTGGATTTGGACAAATGGGCCAGGTCCTTGCCAATTTCTTGTCCACTCCATTGGCTTCAGGAATAGATGGAGACGCTCTAGGATGGCCCTATGTGGCTTTTGATCTTGATCCATCTGTCGTGGAGGCGTCTAGAAAGCAAGGATTTCCAATTCTTTATGGGGATGGCTCTCGTCCTGATGTTTTACAATCTGCCGGTATATCTCTCCCAAAAGCTGTCCTGGTTATGTACACTGCAAGGCAGAAAACAATTGATGCCGTTCAACGGCTTCGACTTGCTTTCCCGTCAATCCCTATTTATGCCAAAGCTCTGGACTTGAAGCACCTTTTGGATCTTAAAAAAGCAGGTGCAACAGATGCCATTATGGAGAGTGCGGAGACTAGTTTGCAGTTGGGGTCTAAGCTTTTGAAAGGGTTTGGTGTCATGTCTGATGATGTGAACTTTCTTCGTCAAATTGTTCGTGATTCCATGGAGCTGCAAGCTCAAGACGTAGTTGAGAAAACTGATGAGCAAGACTTGGATAATTTGAAGCCATTGCAGGTGAGAGTTGCTGATTTAATTGATGACCCCTCATCCATTTCATCAACTTCATCGGAAGAGAATTCATGGGAGGTAAACCGGGTAGGTGCCTCTTACATCTCGACATTGCAGGGAGAAGTGAACGAAGAAGAGCATGACAGTGAACTACAACGGTCTGGGCATACAGAAGGCGAAGAAGTTTCAAATGGTAACTTAGACACAAAGAATGGATTTCCGGTTAAATCACAAGATGTAGAGGAGAAGATAAAAAATGTAGACCCATCTTCCCCATATGTATCAACAAAGGATGAACAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006810 GO:0006811 GO:0006812 GO:0006996 GO:0008150 GO:0008324 GO:0009314 GO:0009416 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009628 GO:0009642 GO:0009643 GO:0009657 GO:0009658 GO:0009893 GO:0009987 GO:0010109 GO:0015075 GO:0015318 GO:0016020 GO:0016043 GO:0019222 GO:0022857 GO:0022890 GO:0031323 GO:0031325 GO:0031976 GO:0031984 GO:0034220 GO:0034357 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0055035 GO:0055085 GO:0065007 GO:0071840 GO:0098655 GO:1905157

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger TrkA_N

Protein Analysis

820

Amino Acids

89.07

Weight (kDa)

5.14

Isoelectric Point (pI)

36.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_H_Exchanger	PF00999	126 - 507	6.1e-68	Sodium/hydrogen exchanger, transmembrane
TrkA_N	PF02254	539 - 663	4.5e-16	TrkA-N domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003895)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01790 AT1G01790 AT4G04850 AT4G04850
fragaria_vesca	FvH4_2g11000
malus_domestica	MD05G1050600.v1.1 MD10G1058200.v1.1
prunus_persica	Prupe.8G077000_v2.0.a1 Prupe.8G077000_v2.0.a1
pyrus_communis	pycom05g04260 pycom05g04270 pycom10g04490
rosa_chinensis	RchiOBHm_Chr6g0269141 RchiOBHm_Chr6g0269211 RchiOBHm_Chr7g0201951
rosa_laevigata	RLG00000017131
rosa_multiflora	Rmu_co8385553.1_g000001 Rmu_sc0005353.1_g000001
rosa_roxburghii	Rroxscaffold_3G00238290 Rroxscaffold_7G00198940
rosa_rugosa	Rorug05G0148000 Rorug05G0148100 Rorug06G0046600 Rorug06G0046600
rosa_samantha	Rh4DG004100 Rh6AG166300 Rh6BG171900 Rh6CG164800 Rh6CG165400 Rh6DG156300 Rh6DG156400 Rh6DG157000 Rh7AG286500
rosa_wichuraiana	Rw6G014360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1958, 2152
AatII	GACGTC	1 cut(s)	1244
Acc36I	ACCTGC	4 cut(s)	1246, 1289, 1958, 2152
AccB1I	GGYRCC	1 cut(s)	2249
AccBSI	CCGCTC	1 cut(s)	1538
AccI	GTMKAC	1 cut(s)	2418
AccII	CGCG	1 cut(s)	443
AciI	CCGC	5 cut(s)	396, 443, 914, 1538, 1997
AclWI	GGATC	2 cut(s)	1727, 1962
AcoI	YGGCCR	2 cut(s)	929, 1274
AcsI	RAATTY	7 cut(s)	578, 672, 1011, 1162, 1558, 1594, 2224
AcuI	CTGAAG	2 cut(s)	753, 1665
AcyI	GRCGYC	2 cut(s)	1241, 1751
AfaI	GTAC	5 cut(s)	167, 453, 780, 870, 1853
AfeI	AGCGCT	1 cut(s)	325
AfiI	CCNNNNNNNGG	8 cut(s)	428, 653, 1191, 1202, 1213, 1349, 1498, 1887
AhlI	ACTAGT	1 cut(s)	2003
AjiI	CACGTC	1 cut(s)	560
AjnI	CCWGG	3 cut(s)	274, 1644, 1842
AjuI	GAANNNNNNNTTGG	2 cut(s)	1934, 1966
Alw21I	GWGCWC	2 cut(s)	65, 1147
Alw26I	GTCTC	4 cut(s)	206, 1398, 1689, 1994
AlwI	GGATC	2 cut(s)	1727, 1962
Aor51HI	AGCGCT	1 cut(s)	325
AoxI	GGCC	9 cut(s)	277, 698, 929, 1193, 1204, 1274, 1339, 1642, 1709
ApeKI	GCWGC	4 cut(s)	749, 784, 1541, 2098
ApoI	RAATTY	7 cut(s)	578, 672, 1011, 1162, 1558, 1594, 2224
AseI	ATTAAT	1 cut(s)	339
AspLEI	GCGC	3 cut(s)	144, 326, 1060
AspS9I	GGNCC	4 cut(s)	1340, 1642, 1648, 1710
AsuC2I	CCSGG	1 cut(s)	2243
AsuHPI	GGTGA	3 cut(s)	815, 1603, 2176
AsuNHI	GCTAGC	2 cut(s)	416, 1150
AvaII	GGWCC	1 cut(s)	1648
BalI	TGGCCA	1 cut(s)	931
BanI	GGYRCC	1 cut(s)	2249
BanII	GRGCYC	1 cut(s)	65
Bbv12I	GWGCWC	2 cut(s)	65, 1147
BbvI	GCAGC	4 cut(s)	736, 796, 1528, 2085
BccI	CCATC	7 cut(s)	285, 529, 1685, 1701, 1744, 1781, 2431
BceAI	ACGGC	4 cut(s)	58, 713, 1865, 1904
BciT130I	CCWGG	3 cut(s)	276, 1646, 1844
BciVI	GTATCC	2 cut(s)	32, 834
BclI	TGATCA	1 cut(s)	1323
BcnI	CCSGG	1 cut(s)	2243
BcoDI	GTCTC	4 cut(s)	206, 1398, 1689, 1994
BcuI	ACTAGT	1 cut(s)	2003
BfaI	CTAG	6 cut(s)	417, 962, 1151, 1703, 1755, 2004
BfmI	CTRYAG	2 cut(s)	782, 1233
BfoI	RGCGCY	1 cut(s)	327
BfuAI	ACCTGC	4 cut(s)	1246, 1289, 1958, 2152
BfuI	GTATCC	2 cut(s)	32, 834
BisI	GCNGC	5 cut(s)	750, 785, 1539, 1542, 2099
BlsI	GCNGC	5 cut(s)	751, 786, 1540, 1543, 2100
Bme1390I	CCNGG	4 cut(s)	276, 1646, 1844, 2243
Bme18I	GGWCC	1 cut(s)	1648
BmgBI	CACGTC	1 cut(s)	560
BmgT120I	GGNCC	4 cut(s)	1340, 1642, 1648, 1710
BmiI	GGNNCC	2 cut(s)	1342, 2251
BmrFI	CCNGG	4 cut(s)	276, 1646, 1844, 2243
BmsI	GCATC	2 cut(s)	1867, 1969
BmtI	GCTAGC	2 cut(s)	420, 1154
BpmI	CTGGAG	1 cut(s)	1161
BpuEI	CTTGAG	3 cut(s)	1380, 1478, 2091
BpuMI	CCSGG	1 cut(s)	2243
BsaBI	GATNNNNATC	2 cut(s)	1310, 1731
BsaHI	GRCGYC	2 cut(s)	1241, 1751
BsaJI	CCNNGG	1 cut(s)	2091
BsaWI	WCCGGW	1 cut(s)	2377
BsaXI	ACNNNNNCTCC	2 cut(s)	286, 316
Bsc4I	CCNNNNNNNGG	8 cut(s)	428, 653, 1191, 1202, 1213, 1349, 1498, 1887
Bse118I	RCCGGY	1 cut(s)	1817
Bse1I	ACTGG	1 cut(s)	890
Bse3DI	GCAATG	2 cut(s)	2156, 2267
Bse8I	GATNNNNATC	2 cut(s)	1310, 1731
BseBI	CCWGG	3 cut(s)	276, 1646, 1844
BseDI	CCNNGG	1 cut(s)	2091
BseGI	GGATG	4 cut(s)	1712, 1792, 2195, 2455
BseJI	GATNNNNATC	2 cut(s)	1310, 1731
BseLI	CCNNNNNNNGG	8 cut(s)	428, 653, 1191, 1202, 1213, 1349, 1498, 1887
BseMI	GCAATG	2 cut(s)	2156, 2267
BseMII	CTCAG	2 cut(s)	617, 1112
BseNI	ACTGG	1 cut(s)	890
BseRI	GAGGAG	1 cut(s)	2414
BseXI	GCAGC	4 cut(s)	736, 796, 1528, 2085
Bsh1236I	CGCG	1 cut(s)	443
BshFI	GGCC	9 cut(s)	279, 700, 931, 1195, 1206, 1276, 1341, 1644, 1711
BshNI	GGYRCC	1 cut(s)	2249
BsiHKAI	GWGCWC	2 cut(s)	65, 1147
BsiSI	CCGG	3 cut(s)	1818, 2242, 2378
BslFI	GGGAC	2 cut(s)	1096, 1252
BslI	CCNNNNNNNGG	8 cut(s)	428, 653, 1191, 1202, 1213, 1349, 1498, 1887
BsmAI	GTCTC	4 cut(s)	206, 1398, 1689, 1994
BsmBI	CGTCTC	1 cut(s)	1689
BsmFI	GGGAC	2 cut(s)	1096, 1252
BsmI	GAATGC	1 cut(s)	398
BsnI	GGCC	9 cut(s)	279, 700, 931, 1195, 1206, 1276, 1341, 1644, 1711
Bsp1286I	GDGCHC	2 cut(s)	65, 1147
Bsp1407I	TGTACA	1 cut(s)	1851
Bsp143I	GATC	6 cut(s)	405, 703, 1323, 1726, 1732, 1954
Bsp19I	CCATGG	1 cut(s)	2091
BspACI	CCGC	5 cut(s)	396, 443, 914, 1538, 1997
BspANI	GGCC	9 cut(s)	279, 700, 931, 1195, 1206, 1276, 1341, 1644, 1711
BspCNI	CTCAG	2 cut(s)	616, 1111
BspFNI	CGCG	1 cut(s)	443
BspLI	GGNNCC	2 cut(s)	1342, 2251
BspMAI	CTGCAG	1 cut(s)	786
BspMI	ACCTGC	4 cut(s)	1246, 1289, 1958, 2152
BspOI	GCTAGC	2 cut(s)	420, 1154
BspPI	GGATC	2 cut(s)	1727, 1962
BspQI	GCTCTTC	3 cut(s)	53, 1528, 2286
BspT107I	GGYRCC	1 cut(s)	2249
BsrBI	CCGCTC	1 cut(s)	1538
BsrDI	GCAATG	2 cut(s)	2156, 2267
BsrFI	RCCGGY	1 cut(s)	1817
BsrGI	TGTACA	1 cut(s)	1851
BsrI	ACTGG	1 cut(s)	890
BssAI	RCCGGY	1 cut(s)	1817
BssECI	CCNNGG	1 cut(s)	2091
BssMI	GATC	6 cut(s)	405, 703, 1323, 1726, 1732, 1954
BssNI	GRCGYC	2 cut(s)	1241, 1751
BssT1I	CCWWGG	1 cut(s)	2091
Bst2UI	CCWGG	3 cut(s)	276, 1646, 1844
Bst4CI	ACNGT	6 cut(s)	96, 382, 1075, 2303, 2316, 2457
Bst6I	CTCTTC	5 cut(s)	53, 1095, 1528, 2214, 2286
BstACI	GRCGYC	2 cut(s)	1241, 1751
BstAPI	GCANNNNNTGC	3 cut(s)	581, 1055, 1979
BstAUI	TGTACA	1 cut(s)	1851
BstC8I	GCNNGC	6 cut(s)	76, 322, 418, 1067, 1152, 2103
BstDEI	CTNAG	7 cut(s)	370, 603, 877, 1004, 1098, 2022, 2356
BstDSI	CCRYGG	1 cut(s)	2091
BstF5I	GGATG	4 cut(s)	1712, 1792, 2195, 2455
BstFNI	CGCG	1 cut(s)	443
BstH2I	RGCGCY	1 cut(s)	327
BstHHI	GCGC	3 cut(s)	144, 326, 1060
BstKTI	GATC	6 cut(s)	408, 706, 1326, 1729, 1735, 1957
BstMAI	GTCTC	4 cut(s)	206, 1398, 1689, 1994
BstMBI	GATC	6 cut(s)	405, 703, 1323, 1726, 1732, 1954
BstNI	CCWGG	3 cut(s)	276, 1646, 1844
BstSCI	CCNGG	4 cut(s)	274, 1644, 1842, 2241
BstSFI	CTRYAG	2 cut(s)	782, 1233
BstUI	CGCG	1 cut(s)	443
BstV1I	GCAGC	4 cut(s)	736, 796, 1528, 2085
BstX2I	RGATCY	1 cut(s)	1954
BstXI	CCANNNNNNTGG	2 cut(s)	1675, 1933
BstYI	RGATCY	1 cut(s)	1954
BsuI	GTATCC	2 cut(s)	32, 834
BsuRI	GGCC	9 cut(s)	279, 700, 931, 1195, 1206, 1276, 1341, 1644, 1711
BtgI	CCRYGG	1 cut(s)	2091
BtrI	CACGTC	1 cut(s)	560
BtsCI	GGATG	4 cut(s)	1712, 1792, 2195, 2455
BtsI	GCAGTG	2 cut(s)	1145, 1854
BtsIMutI	CAGTG	6 cut(s)	18, 897, 1120, 1145, 1854, 2308
BveI	ACCTGC	4 cut(s)	1246, 1289, 1958, 2152
Cac8I	GCNNGC	6 cut(s)	76, 322, 418, 1067, 1152, 2103
CfoI	GCGC	3 cut(s)	144, 326, 1060
Cfr10I	RCCGGY	1 cut(s)	1817
Cfr13I	GGNCC	4 cut(s)	1340, 1642, 1648, 1710
CseI	GACGC	3 cut(s)	1327, 1706, 1740
Csp6I	GTAC	5 cut(s)	166, 452, 779, 869, 1852
CviAII	CATG	4 cut(s)	2047, 2092, 2229, 2297
CviQI	GTAC	5 cut(s)	166, 452, 779, 869, 1852
DdeI	CTNAG	7 cut(s)	370, 603, 877, 1004, 1098, 2022, 2356
DpnI	GATC	6 cut(s)	407, 705, 1325, 1728, 1734, 1956
DpnII	GATC	6 cut(s)	405, 703, 1323, 1726, 1732, 1954
DraI	TTTAAA	1 cut(s)	954
EaeI	YGGCCR	2 cut(s)	929, 1274
Eam1104I	CTCTTC	5 cut(s)	53, 1095, 1528, 2214, 2286
EarI	CTCTTC	5 cut(s)	53, 1095, 1528, 2214, 2286
Ecl136II	GAGCTC	1 cut(s)	63
Eco130I	CCWWGG	1 cut(s)	2091
Eco147I	AGGCCT	1 cut(s)	1206
Eco24I	GRGCYC	1 cut(s)	65
Eco47I	GGWCC	1 cut(s)	1648
Eco47III	AGCGCT	1 cut(s)	325
Eco53kI	GAGCTC	1 cut(s)	63
Eco57I	CTGAAG	2 cut(s)	753, 1665
EcoICRI	GAGCTC	1 cut(s)	63
EcoO109I	RGGNCCY	2 cut(s)	1340, 1648
EcoRI	GAATTC	1 cut(s)	2224
EcoRII	CCWGG	3 cut(s)	274, 1644, 1842
EcoT14I	CCWWGG	1 cut(s)	2091
EcoT38I	GRGCYC	1 cut(s)	65
ErhI	CCWWGG	1 cut(s)	2091
Esp3I	CGTCTC	1 cut(s)	1689
FaeI	CATG	4 cut(s)	2050, 2095, 2232, 2300
FaqI	GGGAC	2 cut(s)	1096, 1252
FatI	CATG	4 cut(s)	2046, 2091, 2228, 2296
FauI	CCCGC	2 cut(s)	403, 436
FauNDI	CATATG	2 cut(s)	154, 2434
FbaI	TGATCA	1 cut(s)	1323
FblI	GTMKAC	1 cut(s)	2418
Fnu4HI	GCNGC	5 cut(s)	750, 785, 1539, 1542, 2099
FokI	GGATG	3 cut(s)	1719, 1799, 2182
FriOI	GRGCYC	1 cut(s)	65
Fsp4HI	GCNGC	5 cut(s)	750, 785, 1539, 1542, 2099
FspBI	CTAG	6 cut(s)	417, 962, 1151, 1703, 1755, 2004
GlaI	GCGC	3 cut(s)	143, 325, 1059
GluI	GCNGC	5 cut(s)	750, 785, 1539, 1542, 2099
GsuI	CTGGAG	1 cut(s)	1161
HaeII	RGCGCY	1 cut(s)	327
HaeIII	GGCC	9 cut(s)	279, 700, 931, 1195, 1206, 1276, 1341, 1644, 1711
HapII	CCGG	3 cut(s)	1818, 2242, 2378
HgaI	GACGC	3 cut(s)	1327, 1706, 1740
HhaI	GCGC	3 cut(s)	144, 326, 1060
Hin1I	GRCGYC	2 cut(s)	1241, 1751
Hin1II	CATG	4 cut(s)	2050, 2095, 2232, 2300
Hin6I	GCGC	3 cut(s)	142, 324, 1058
HinP1I	GCGC	3 cut(s)	142, 324, 1058
HindIII	AAGCTT	1 cut(s)	2024
HinfI	GANTC	5 cut(s)	8, 478, 514, 1353, 2087
HpaII	CCGG	3 cut(s)	1818, 2242, 2378
HphI	GGTGA	3 cut(s)	815, 1603, 2176
Hpy166II	GTNNAC	9 cut(s)	806, 1610, 1668, 1854, 2062, 2239, 2284, 2306, 2419
Hpy188I	TCNGA	8 cut(s)	26, 505, 719, 1045, 1101, 1268, 2053, 2218
Hpy8I	GTNNAC	9 cut(s)	806, 1610, 1668, 1854, 2062, 2239, 2284, 2306, 2419
HpyAV	CCTTC	3 cut(s)	595, 937, 2324
HpyCH4III	ACNGT	6 cut(s)	96, 382, 1075, 2303, 2316, 2457
HpyCH4IV	ACGT	5 cut(s)	365, 559, 680, 1241, 2112
HpyF3I	CTNAG	7 cut(s)	370, 603, 877, 1004, 1098, 2022, 2356
HpySE526I	ACGT	5 cut(s)	365, 559, 680, 1241, 2112
Hsp92I	GRCGYC	2 cut(s)	1241, 1751
Hsp92II	CATG	4 cut(s)	2050, 2095, 2232, 2300
HspAI	GCGC	3 cut(s)	142, 324, 1058
Ksp22I	TGATCA	1 cut(s)	1323
Kzo9I	GATC	6 cut(s)	405, 703, 1323, 1726, 1732, 1954
LguI	GCTCTTC	3 cut(s)	53, 1528, 2286
LmnI	GCTCC	4 cut(s)	83, 1127, 1142, 2095
Lsp1109I	GCAGC	4 cut(s)	736, 796, 1528, 2085
LweI	GCATC	2 cut(s)	1867, 1969
MaeI	CTAG	6 cut(s)	417, 962, 1151, 1703, 1755, 2004
MaeII	ACGT	5 cut(s)	365, 559, 680, 1241, 2112
MaeIII	GTNAC	5 cut(s)	13, 376, 1115, 1228, 2351
MalI	GATC	6 cut(s)	407, 705, 1325, 1728, 1734, 1956
MbiI	CCGCTC	1 cut(s)	1538
MboI	GATC	6 cut(s)	405, 703, 1323, 1726, 1732, 1954
MfeI	CAATTG	2 cut(s)	107, 1872
MflI	RGATCY	1 cut(s)	1954
MhlI	GDGCHC	2 cut(s)	65, 1147
MlsI	TGGCCA	1 cut(s)	931
MluNI	TGGCCA	1 cut(s)	931
MlyI	GAGTC	2 cut(s)	17, 1347
MmeI	TCCRAC	1 cut(s)	1330
Mox20I	TGGCCA	1 cut(s)	931
MscI	TGGCCA	1 cut(s)	931
MslI	CAYNNNNRTG	1 cut(s)	2301
Msp20I	TGGCCA	1 cut(s)	931
MspI	CCGG	3 cut(s)	1818, 2242, 2378
MspR9I	CCNGG	4 cut(s)	276, 1646, 1844, 2243
MunI	CAATTG	2 cut(s)	107, 1872
Mva1269I	GAATGC	1 cut(s)	398
MvaI	CCWGG	3 cut(s)	276, 1646, 1844
MvnI	CGCG	1 cut(s)	443
NciI	CCSGG	1 cut(s)	2243
NcoI	CCATGG	1 cut(s)	2091
NdeI	CATATG	2 cut(s)	154, 2434
NdeII	GATC	6 cut(s)	405, 703, 1323, 1726, 1732, 1954
NheI	GCTAGC	2 cut(s)	416, 1150
NlaIII	CATG	4 cut(s)	2050, 2095, 2232, 2300
NlaIV	GGNNCC	2 cut(s)	1342, 2251
NmuCI	GTSAC	3 cut(s)	13, 376, 1115
PaqCI	CACCTGC	2 cut(s)	1958, 2152
PceI	AGGCCT	1 cut(s)	1206
PciSI	GCTCTTC	3 cut(s)	53, 1528, 2286
PctI	GAATGC	1 cut(s)	398
PfeI	GAWTC	3 cut(s)	478, 514, 2087
PflFI	GACNNNGTC	1 cut(s)	180
PkrI	GCNGC	5 cut(s)	751, 786, 1540, 1543, 2100
PleI	GAGTC	2 cut(s)	16, 1347
PpsI	GAGTC	2 cut(s)	16, 1347
PpuMI	RGGWCCY	1 cut(s)	1648
PshBI	ATTAAT	1 cut(s)	339
Psp124BI	GAGCTC	1 cut(s)	65
Psp5II	RGGWCCY	1 cut(s)	1648
Psp6I	CCWGG	3 cut(s)	274, 1644, 1842
PspGI	CCWGG	3 cut(s)	274, 1644, 1842
PspN4I	GGNNCC	2 cut(s)	1342, 2251
PspPI	GGNCC	4 cut(s)	1340, 1642, 1648, 1710
PspPPI	RGGWCCY	1 cut(s)	1648
PstI	CTGCAG	1 cut(s)	786
PsuI	RGATCY	1 cut(s)	1954
PsyI	GACNNNGTC	1 cut(s)	180
RsaI	GTAC	5 cut(s)	167, 453, 780, 870, 1853
RsaNI	GTAC	5 cut(s)	166, 452, 779, 869, 1852
RseI	CAYNNNNRTG	1 cut(s)	2301
SacI	GAGCTC	1 cut(s)	65
SapI	GCTCTTC	3 cut(s)	53, 1528, 2286
SatI	GCNGC	5 cut(s)	750, 785, 1539, 1542, 2099
Sau3AI	GATC	6 cut(s)	405, 703, 1323, 1726, 1732, 1954
Sau96I	GGNCC	4 cut(s)	1340, 1642, 1648, 1710
SchI	GAGTC	2 cut(s)	17, 1347
ScrFI	CCNGG	4 cut(s)	276, 1646, 1844, 2243
SduI	GDGCHC	2 cut(s)	65, 1147
SfaNI	GCATC	2 cut(s)	1867, 1969
SfcI	CTRYAG	2 cut(s)	782, 1233
SinI	GGWCC	1 cut(s)	1648
SmiMI	CAYNNNNRTG	1 cut(s)	2301
SmlI	CTYRAG	3 cut(s)	1395, 1457, 2106
SmoI	CTYRAG	3 cut(s)	1395, 1457, 2106
SpeI	ACTAGT	1 cut(s)	2003
SseBI	AGGCCT	1 cut(s)	1206
SsiI	CCGC	5 cut(s)	396, 443, 914, 1538, 1997
SspMI	CTAG	6 cut(s)	417, 962, 1151, 1703, 1755, 2004
SstI	GAGCTC	1 cut(s)	65
StuI	AGGCCT	1 cut(s)	1206
StyD4I	CCNGG	4 cut(s)	274, 1644, 1842, 2241
StyI	CCWWGG	1 cut(s)	2091
TaaI	ACNGT	6 cut(s)	96, 382, 1075, 2303, 2316, 2457
TaiI	ACGT	5 cut(s)	368, 562, 683, 1244, 2115
TaqI	TCGA	3 cut(s)	1201, 1894, 2264
TatI	WGTACW	4 cut(s)	165, 451, 778, 1851
TauI	GCSGC	1 cut(s)	1541
TfiI	GAWTC	3 cut(s)	478, 514, 2087
TscAI	CASTG	6 cut(s)	18, 897, 1120, 1152, 1861, 2308
TseFI	GTSAC	3 cut(s)	13, 376, 1115
TseI	GCWGC	4 cut(s)	749, 784, 1541, 2098
Tsp45I	GTSAC	3 cut(s)	13, 376, 1115
TspDTI	ATGAA	7 cut(s)	540, 744, 1536, 1569, 2193, 2202, 2217
TspGWI	ACGGA	1 cut(s)	490
TspRI	CASTG	6 cut(s)	18, 897, 1120, 1152, 1861, 2308
Tth111I	GACNNNGTC	1 cut(s)	180
VpaK11BI	GGWCC	1 cut(s)	1648
VspI	ATTAAT	1 cut(s)	339
XapI	RAATTY	7 cut(s)	578, 672, 1011, 1162, 1558, 1594, 2224
XbaI	TCTAGA	1 cut(s)	1754
XmiI	GTMKAC	1 cut(s)	2418
XspI	CTAG	6 cut(s)	417, 962, 1151, 1703, 1755, 2004
ZraI	GACGTC	1 cut(s)	1242

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.