Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0003895

Physical Location & Seq

Genomic Coordinates Reverse (-)

26566713 .. 26578225

Gene Structure 11513 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG166300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2124 bp

ATGTTGGAGTCAGTGACTTGTTTTGGAAGCTATAAGGGATACGACATTATCAAACAAAAGAGCCCATTTATGGCTTGCTCCATAGGCACATCACGGTTATGTGGGCATCCTTTCAGTCCTTATGTTAGTAACCAGCAAGTGCGCTCGTTATCATATGCCAATAAGTACAAGATAAGACATAGTCCTTTTGTTTCAAGAAATTTCATTCAAGGCAATTCTTCATTAACTTCCTCTGTACACTGCTGGCGAGGATTTTATTTCTCAAACCATAGACCTGGCCAGTCAGCAAGATGGAGGATATATGCAACACTTGATGTTGCCAGCGCTGTTGATGTCATCAATGATTTAGGATTTGATACTCTGACGTTCTTAGCTGTGACTGTTCTGGTTGTTCCTGCATTCAAGATCATCAAAGCTAGCCCTATACTCGGTTTCTTCTTTGCGGGGATTGTACTCAATCAGTTTGGCTTGATTCGGAATCTTACAGATGTGAAAATTTTATCAGAATGGGGGATTCTTTTTTTGCTATTTGAGATGGGATTAGAGCTGTCATTTTCACGTCTAAAGGCTCTTGCAAAATTTGCCTTCGGCATGGGATTAACTCAGGTCGTATTATCTACTCTTGCTTTCACAGCATTTGAACTTCCTCCTAATGGGGCTATTGGAACACAAATTTTGACGTTCCTCTTTAACTCAAGGCCTGATCTGGTCAATATCAGAAGCATTGATGAAGCAGTAGTGATTGGTGCTGCTCTATCTTTATCTTCCTCAGCTTTTGTACTGCAGCTTGGAGCATTTTTGGCTGGAGCACTGCTAGCAGAAACAAATTTCCGGACACAAATTGAAGCCGATATAAGGCCATTTAGAGGCTTACTTCTGGGGTTATTTTTTGTAACTACAGGGACGTCCATTGACACGCAGCTTCTTTTTCGAGAGTGGCCGAATGTGCTTTCACTCTTGGCGGGTTTGATTGTCATCAAGACGCTGATAATAACAGCGATAGGCCCTCGTGTTGGACTCACTTTACAAGAAAGTGTAAGAATAGGATTGCTTTTGTCTCAAGGAGGGGAGTTTGGCTTTGTAGTTTTTTCTCTTGCAAACAGGCTTGGTGTGCTACCACTTGAGCTTAACAAGTTGCTCATAATTGTTGTTGTCCTGTCAATGGCATTAACCCCATTGCTTAATGAAGCTGGAAGAAGAGCTGCTGCATATATTGATGACAATTTTGAAGCAGAGGATAAAGTTCCTGATGTGGTGAATTTCAATTCAAGTGAACCTGTTGTTATTCTTGGATTTGGACAAATGGGCCAGGTCCTTGCCAATTTCTTGTCCACTCCATTGGCTTCAGGAATAGATGGAGATTCTCTGGGATGGCCCTATGTAGCTTTTGATCTTGATCCATCTGTCGTGAAGGGGTCTAGAAAGCTCGGCTTTCCAATTCTTTACGGGGATGGATCACGTCCTGATGTTTTGCAATCTGCTGGTATATCTCTCCCAAAAGCTGTCTTGGTTATGTACACTGCAAGGGAGAAAACAATTGATGCCGTTCAAAGGCTTCGACTTGCTTTCCCTTCAATCCCTATTTATGCCAGAGCTCTGGACCTGAAGCACCTTTTAGATCTGAAAAAAGCAGGTGCAACAGATGCCATTATGGAAAGTGCAGAGACAAGTTTGCAGCTGGGCTCTAAGCTTTTGAAAGGGTTCGGTGTTATGTCTGATGATGTGAACTTTCTTCGTCAAATTGTTCGTGATTCCATGGAGCTGCAAGCTCAAGAAGTAGTCGGGAAAACTGATGATCAAGACTTGAATAATTTGAAGTCATTGCAGGTGAGAGTTGCTGACTTAATTGATGACCCCTCATCCGTTTCATCAACTTCATCGGAAGACAATTCATGGGAGGTAAACAAGGTGGGTGCTTCTTATATCTCGACGTTGCAGGGAGATGTAGATGAAGCAGAGCATGACAGTGAACTCCAACGGTCAGGGCATACGGATGGTGAAAAAATTTCGCATGGTAACTTAGACACAAAGAATGGGTTTCCAGTTAAACCGCAAGATGCTGAGGGGGAGATAAATACAGTAGACCCATCAACCCGCCGTGTAACGACTAAGGATGAACAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006810 GO:0006811 GO:0006812 GO:0006996 GO:0008150 GO:0008324 GO:0009314 GO:0009416 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009628 GO:0009642 GO:0009643 GO:0009657 GO:0009658 GO:0009893 GO:0009987 GO:0010109 GO:0015075 GO:0015318 GO:0016020 GO:0016043 GO:0019222 GO:0022857 GO:0022890 GO:0031323 GO:0031325 GO:0031976 GO:0031984 GO:0034220 GO:0034357 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0055035 GO:0055085 GO:0065007 GO:0071840 GO:0098655 GO:1905157

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger TrkA_N

Protein Analysis

707

Amino Acids

77.01

Weight (kDa)

5.49

Isoelectric Point (pI)

35.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_H_Exchanger	PF00999	126 - 262	6.3e-16	Sodium/hydrogen exchanger, transmembrane
Na_H_Exchanger	PF00999	263 - 395	3.1e-25	Sodium/hydrogen exchanger, transmembrane
TrkA_N	PF02254	427 - 551	1.7e-15	TrkA-N domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003895)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01790 AT1G01790 AT4G04850 AT4G04850
fragaria_vesca	FvH4_2g11000
malus_domestica	MD05G1050600.v1.1 MD10G1058200.v1.1
prunus_persica	Prupe.8G077000_v2.0.a1 Prupe.8G077000_v2.0.a1
pyrus_communis	pycom05g04260 pycom05g04270 pycom10g04490
rosa_chinensis	RchiOBHm_Chr6g0269141 RchiOBHm_Chr6g0269211 RchiOBHm_Chr7g0201951
rosa_laevigata	RLG00000017131
rosa_multiflora	Rmu_co8385553.1_g000001 Rmu_sc0005353.1_g000001
rosa_roxburghii	Rroxscaffold_3G00238290 Rroxscaffold_7G00198940
rosa_rugosa	Rorug05G0148000 Rorug05G0148100 Rorug06G0046600 Rorug06G0046600
rosa_samantha	Rh4DG004100 Rh6AG166300 Rh6BG171900 Rh6CG164800 Rh6CG165400 Rh6DG156300 Rh6DG156400 Rh6DG157000 Rh7AG286500
rosa_wichuraiana	Rw6G014360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1622, 1816
AatII	GACGTC	1 cut(s)	908
Acc36I	ACCTGC	2 cut(s)	1622, 1816
AccI	GTMKAC	1 cut(s)	2082
AccIII	TCCGGA	1 cut(s)	831
AciI	CCGC	4 cut(s)	443, 962, 2051, 2095
AclWI	GGATC	2 cut(s)	1391, 1462
AcoI	YGGCCR	2 cut(s)	277, 938
AcsI	RAATTY	7 cut(s)	199, 495, 578, 672, 826, 1258, 2004
AcuI	CTGAAG	2 cut(s)	1329, 1625
AcyI	GRCGYC	1 cut(s)	905
AfaI	GTAC	5 cut(s)	167, 237, 453, 780, 1517
AfeI	AGCGCT	1 cut(s)	325
AfiI	CCNNNNNNNGG	8 cut(s)	70, 428, 653, 855, 866, 1013, 1162, 1551
AjiI	CACGTC	2 cut(s)	560, 1460
AjnI	CCWGG	2 cut(s)	274, 1308
Alw21I	GWGCWC	2 cut(s)	811, 1597
Alw26I	GTCTC	2 cut(s)	1062, 1658
AlwI	GGATC	2 cut(s)	1391, 1462
Aor13HI	TCCGGA	1 cut(s)	831
Aor51HI	AGCGCT	1 cut(s)	325
AoxI	GGCC	7 cut(s)	277, 698, 857, 938, 1003, 1306, 1373
ApeKI	GCWGC	7 cut(s)	749, 784, 919, 1202, 1205, 1675, 1762
ApoI	RAATTY	7 cut(s)	199, 495, 578, 672, 826, 1258, 2004
Asp700I	GAANNNNTTC	1 cut(s)	1700
AspLEI	GCGC	2 cut(s)	144, 326
AspS9I	GGNCC	5 cut(s)	1004, 1306, 1312, 1374, 1600
AsuHPI	GGTGA	3 cut(s)	1267, 1840, 2009
AsuNHI	GCTAGC	2 cut(s)	416, 814
AvaII	GGWCC	2 cut(s)	1312, 1600
BalI	TGGCCA	1 cut(s)	279
BanII	GRGCYC	3 cut(s)	65, 1597, 1685
BauI	CACGAG	1 cut(s)	1008
BbsI	GAAGAC	1 cut(s)	1890
Bbv12I	GWGCWC	2 cut(s)	811, 1597
BbvCI	CCTCAGC	2 cut(s)	769, 2061
BbvI	GCAGC	7 cut(s)	736, 796, 931, 1189, 1192, 1687, 1749
BccI	CCATC	8 cut(s)	285, 529, 1349, 1365, 1408, 1445, 1988, 2095
BceAI	ACGGC	2 cut(s)	1529, 2082
BciT130I	CCWGG	2 cut(s)	276, 1310
BciVI	GTATCC	1 cut(s)	32
BclI	TGATCA	1 cut(s)	1795
BcoDI	GTCTC	2 cut(s)	1062, 1658
BfaI	CTAG	3 cut(s)	417, 815, 1419
BfmI	CTRYAG	2 cut(s)	782, 897
BfoI	RGCGCY	1 cut(s)	327
BfuAI	ACCTGC	2 cut(s)	1622, 1816
BfuI	GTATCC	1 cut(s)	32
BglII	AGATCT	1 cut(s)	1618
BisI	GCNGC	7 cut(s)	750, 785, 920, 1203, 1206, 1676, 1763
BlsI	GCNGC	7 cut(s)	751, 786, 921, 1204, 1207, 1677, 1764
Bme1390I	CCNGG	2 cut(s)	276, 1310
Bme18I	GGWCC	2 cut(s)	1312, 1600
BmgBI	CACGTC	2 cut(s)	560, 1460
BmgT120I	GGNCC	5 cut(s)	1004, 1306, 1312, 1374, 1600
BmrFI	CCNGG	2 cut(s)	276, 1310
BmsI	GCATC	4 cut(s)	115, 1531, 1633, 2047
BmtI	GCTAGC	2 cut(s)	420, 818
BpiI	GAAGAC	1 cut(s)	1890
BpmI	CTGGAG	1 cut(s)	825
Bpu10I	CCTNAGC	2 cut(s)	769, 2061
BpuEI	CTTGAG	4 cut(s)	679, 1044, 1142, 1755
BsaBI	GATNNNNATC	2 cut(s)	974, 1395
BsaHI	GRCGYC	1 cut(s)	905
BsaJI	CCNNGG	1 cut(s)	1755
BsaWI	WCCGGW	1 cut(s)	831
Bsc4I	CCNNNNNNNGG	8 cut(s)	70, 428, 653, 855, 866, 1013, 1162, 1551
Bse1I	ACTGG	2 cut(s)	280, 2042
Bse3DI	GCAATG	2 cut(s)	1175, 1820
Bse8I	GATNNNNATC	2 cut(s)	974, 1395
BseAI	TCCGGA	1 cut(s)	831
BseBI	CCWGG	2 cut(s)	276, 1310
BseDI	CCNNGG	1 cut(s)	1755
BseGI	GGATG	6 cut(s)	106, 1376, 1456, 1859, 1999, 2119
BseJI	GATNNNNATC	2 cut(s)	974, 1395
BseLI	CCNNNNNNNGG	8 cut(s)	70, 428, 653, 855, 866, 1013, 1162, 1551
BseMI	GCAATG	2 cut(s)	1175, 1820
BseMII	CTCAG	3 cut(s)	617, 783, 2052
BseNI	ACTGG	2 cut(s)	280, 2042
BseXI	GCAGC	7 cut(s)	736, 796, 931, 1189, 1192, 1687, 1749
BseYI	CCCAGC	1 cut(s)	1678
BsgI	GTGCAG	1 cut(s)	1680
BshFI	GGCC	7 cut(s)	279, 700, 859, 940, 1005, 1308, 1375
BsiHKAI	GWGCWC	2 cut(s)	811, 1597
BsiSI	CCGG	1 cut(s)	832
BslFI	GGGAC	1 cut(s)	916
BslI	CCNNNNNNNGG	8 cut(s)	70, 428, 653, 855, 866, 1013, 1162, 1551
BsmAI	GTCTC	2 cut(s)	1062, 1658
BsmFI	GGGAC	1 cut(s)	916
BsmI	GAATGC	1 cut(s)	398
BsnI	GGCC	7 cut(s)	279, 700, 859, 940, 1005, 1308, 1375
Bsp1286I	GDGCHC	4 cut(s)	65, 811, 1597, 1685
Bsp13I	TCCGGA	1 cut(s)	831
Bsp1407I	TGTACA	2 cut(s)	235, 1515
Bsp143I	GATC	7 cut(s)	405, 703, 1390, 1396, 1454, 1618, 1795
Bsp19I	CCATGG	1 cut(s)	1755
BspACI	CCGC	4 cut(s)	443, 962, 2051, 2095
BspANI	GGCC	7 cut(s)	279, 700, 859, 940, 1005, 1308, 1375
BspCNI	CTCAG	3 cut(s)	616, 782, 2053
BspEI	TCCGGA	1 cut(s)	831
BspMAI	CTGCAG	1 cut(s)	786
BspMI	ACCTGC	2 cut(s)	1622, 1816
BspOI	GCTAGC	2 cut(s)	420, 818
BspPI	GGATC	2 cut(s)	1391, 1462
BspQI	GCTCTTC	1 cut(s)	1192
BsrDI	GCAATG	2 cut(s)	1175, 1820
BsrGI	TGTACA	2 cut(s)	235, 1515
BsrI	ACTGG	2 cut(s)	280, 2042
BssECI	CCNNGG	1 cut(s)	1755
BssMI	GATC	7 cut(s)	405, 703, 1390, 1396, 1454, 1618, 1795
BssNI	GRCGYC	1 cut(s)	905
BssSI	CACGAG	1 cut(s)	1008
BssT1I	CCWWGG	1 cut(s)	1755
Bst2BI	CACGAG	1 cut(s)	1008
Bst2UI	CCWGG	2 cut(s)	276, 1310
Bst4CI	ACNGT	6 cut(s)	96, 382, 1967, 1980, 2080, 2121
Bst6I	CTCTTC	1 cut(s)	1192
BstACI	GRCGYC	1 cut(s)	905
BstAPI	GCANNNNNTGC	2 cut(s)	581, 1643
BstAUI	TGTACA	2 cut(s)	235, 1515
BstC8I	GCNNGC	6 cut(s)	76, 245, 322, 418, 816, 1767
BstDEI	CTNAG	7 cut(s)	370, 603, 769, 1686, 2020, 2061, 2109
BstDSI	CCRYGG	1 cut(s)	1755
BstF5I	GGATG	6 cut(s)	106, 1376, 1456, 1859, 1999, 2119
BstH2I	RGCGCY	1 cut(s)	327
BstHHI	GCGC	2 cut(s)	144, 326
BstKTI	GATC	7 cut(s)	408, 706, 1393, 1399, 1457, 1621, 1798
BstMAI	GTCTC	2 cut(s)	1062, 1658
BstMBI	GATC	7 cut(s)	405, 703, 1390, 1396, 1454, 1618, 1795
BstMWI	GCNNNNNNNGC	8 cut(s)	84, 581, 632, 800, 815, 946, 1111, 1643
BstNI	CCWGG	2 cut(s)	276, 1310
BstSCI	CCNGG	2 cut(s)	274, 1308
BstSFI	CTRYAG	2 cut(s)	782, 897
BstV1I	GCAGC	7 cut(s)	736, 796, 931, 1189, 1192, 1687, 1749
BstV2I	GAAGAC	1 cut(s)	1890
BstX2I	RGATCY	1 cut(s)	1618
BstXI	CCANNNNNNTGG	3 cut(s)	275, 1339, 1597
BstYI	RGATCY	1 cut(s)	1618
BsuI	GTATCC	1 cut(s)	32
BsuRI	GGCC	7 cut(s)	279, 700, 859, 940, 1005, 1308, 1375
BtgI	CCRYGG	1 cut(s)	1755
BtrI	CACGTC	2 cut(s)	560, 1460
BtsCI	GGATG	6 cut(s)	106, 1376, 1456, 1859, 1999, 2119
BtsI	GCAGTG	3 cut(s)	238, 809, 1518
BtsIMutI	CAGTG	5 cut(s)	18, 238, 809, 1518, 1972
BveI	ACCTGC	2 cut(s)	1622, 1816
Cac8I	GCNNGC	6 cut(s)	76, 245, 322, 418, 816, 1767
CfoI	GCGC	2 cut(s)	144, 326
Cfr13I	GGNCC	5 cut(s)	1004, 1306, 1312, 1374, 1600
CseI	GACGC	1 cut(s)	991
Csp6I	GTAC	5 cut(s)	166, 236, 452, 779, 1516
CviAII	CATG	5 cut(s)	592, 1756, 1893, 1961, 2012
CviQI	GTAC	5 cut(s)	166, 236, 452, 779, 1516
DdeI	CTNAG	7 cut(s)	370, 603, 769, 1686, 2020, 2061, 2109
DpnI	GATC	7 cut(s)	407, 705, 1392, 1398, 1456, 1620, 1797
DpnII	GATC	7 cut(s)	405, 703, 1390, 1396, 1454, 1618, 1795
EaeI	YGGCCR	2 cut(s)	277, 938
Eam1104I	CTCTTC	1 cut(s)	1192
EarI	CTCTTC	1 cut(s)	1192
Ecl136II	GAGCTC	1 cut(s)	1595
Eco130I	CCWWGG	1 cut(s)	1755
Eco147I	AGGCCT	1 cut(s)	700
Eco24I	GRGCYC	3 cut(s)	65, 1597, 1685
Eco47I	GGWCC	2 cut(s)	1312, 1600
Eco47III	AGCGCT	1 cut(s)	325
Eco53kI	GAGCTC	1 cut(s)	1595
Eco57I	CTGAAG	2 cut(s)	1329, 1625
EcoICRI	GAGCTC	1 cut(s)	1595
EcoO109I	RGGNCCY	2 cut(s)	1004, 1312
EcoRII	CCWGG	2 cut(s)	274, 1308
EcoT14I	CCWWGG	1 cut(s)	1755
EcoT38I	GRGCYC	3 cut(s)	65, 1597, 1685
ErhI	CCWWGG	1 cut(s)	1755
FaeI	CATG	5 cut(s)	595, 1759, 1896, 1964, 2015
FalI	AAGNNNNNCTT	2 cut(s)	1415, 1447
FaqI	GGGAC	1 cut(s)	916
FatI	CATG	5 cut(s)	591, 1755, 1892, 1960, 2011
FauI	CCCGC	3 cut(s)	436, 955, 2102
FauNDI	CATATG	1 cut(s)	154
FbaI	TGATCA	1 cut(s)	1795
FblI	GTMKAC	1 cut(s)	2082
Fnu4HI	GCNGC	7 cut(s)	750, 785, 920, 1203, 1206, 1676, 1763
FokI	GGATG	5 cut(s)	93, 1383, 1463, 1846, 2006
FriOI	GRGCYC	3 cut(s)	65, 1597, 1685
Fsp4HI	GCNGC	7 cut(s)	750, 785, 920, 1203, 1206, 1676, 1763
FspBI	CTAG	3 cut(s)	417, 815, 1419
GlaI	GCGC	2 cut(s)	143, 325
GluI	GCNGC	7 cut(s)	750, 785, 920, 1203, 1206, 1676, 1763
GsaI	CCCAGC	1 cut(s)	1682
GsuI	CTGGAG	1 cut(s)	825
HaeII	RGCGCY	1 cut(s)	327
HaeIII	GGCC	7 cut(s)	279, 700, 859, 940, 1005, 1308, 1375
HapII	CCGG	1 cut(s)	832
HgaI	GACGC	1 cut(s)	991
HhaI	GCGC	2 cut(s)	144, 326
Hin1I	GRCGYC	1 cut(s)	905
Hin1II	CATG	5 cut(s)	595, 1759, 1896, 1964, 2015
Hin6I	GCGC	2 cut(s)	142, 324
HinP1I	GCGC	2 cut(s)	142, 324
HindIII	AAGCTT	1 cut(s)	1688
HinfI	GANTC	7 cut(s)	8, 472, 478, 514, 1017, 1361, 1751
HpaII	CCGG	1 cut(s)	832
HphI	GGTGA	3 cut(s)	1267, 1840, 2009
Hpy166II	GTNNAC	8 cut(s)	238, 1274, 1332, 1518, 1726, 1903, 1970, 2083
Hpy188I	TCNGA	7 cut(s)	363, 477, 505, 719, 1623, 1717, 1882
Hpy8I	GTNNAC	8 cut(s)	238, 1274, 1332, 1518, 1726, 1903, 1970, 2083
Hpy99I	CGWCG	1 cut(s)	1933
HpyAV	CCTTC	3 cut(s)	595, 1405, 1581
HpyCH4III	ACNGT	6 cut(s)	96, 382, 1967, 1980, 2080, 2121
HpyCH4IV	ACGT	6 cut(s)	365, 559, 680, 905, 1459, 1931
HpyF10VI	GCNNNNNNNGC	8 cut(s)	84, 581, 632, 800, 815, 946, 1111, 1643
HpyF3I	CTNAG	7 cut(s)	370, 603, 769, 1686, 2020, 2061, 2109
HpySE526I	ACGT	6 cut(s)	365, 559, 680, 905, 1459, 1931
Hsp92I	GRCGYC	1 cut(s)	905
Hsp92II	CATG	5 cut(s)	595, 1759, 1896, 1964, 2015
HspAI	GCGC	2 cut(s)	142, 324
Kpn2I	TCCGGA	1 cut(s)	831
Ksp22I	TGATCA	1 cut(s)	1795
Kzo9I	GATC	7 cut(s)	405, 703, 1390, 1396, 1454, 1618, 1795
LguI	GCTCTTC	1 cut(s)	1192
LmnI	GCTCC	4 cut(s)	83, 791, 806, 1759
Lsp1109I	GCAGC	7 cut(s)	736, 796, 931, 1189, 1192, 1687, 1749
LweI	GCATC	4 cut(s)	115, 1531, 1633, 2047
MaeI	CTAG	3 cut(s)	417, 815, 1419
MaeII	ACGT	6 cut(s)	365, 559, 680, 905, 1459, 1931
MaeIII	GTNAC	6 cut(s)	13, 128, 376, 892, 2015, 2101
MalI	GATC	7 cut(s)	407, 705, 1392, 1398, 1456, 1620, 1797
MboI	GATC	7 cut(s)	405, 703, 1390, 1396, 1454, 1618, 1795
MboII	GAAGA	7 cut(s)	210, 427, 756, 1206, 1209, 1724, 1895
MfeI	CAATTG	1 cut(s)	1536
MflI	RGATCY	1 cut(s)	1618
MhlI	GDGCHC	4 cut(s)	65, 811, 1597, 1685
MlsI	TGGCCA	1 cut(s)	279
MluNI	TGGCCA	1 cut(s)	279
MlyI	GAGTC	2 cut(s)	17, 1011
MmeI	TCCRAC	2 cut(s)	994, 1999
Mox20I	TGGCCA	1 cut(s)	279
MroI	TCCGGA	1 cut(s)	831
MroXI	GAANNNNTTC	1 cut(s)	1700
MscI	TGGCCA	1 cut(s)	279
MseI	TTAA	8 cut(s)	224, 599, 690, 1128, 1169, 1182, 1844, 2046
MslI	CAYNNNNRTG	3 cut(s)	97, 1965, 1992
Msp20I	TGGCCA	1 cut(s)	279
MspA1I	CMGCKG	1 cut(s)	1678
MspI	CCGG	1 cut(s)	832
MspR9I	CCNGG	2 cut(s)	276, 1310
MunI	CAATTG	1 cut(s)	1536
Mva1269I	GAATGC	1 cut(s)	398
MvaI	CCWGG	2 cut(s)	276, 1310
MwoI	GCNNNNNNNGC	8 cut(s)	84, 581, 632, 800, 815, 946, 1111, 1643
NcoI	CCATGG	1 cut(s)	1755
NdeI	CATATG	1 cut(s)	154
NdeII	GATC	7 cut(s)	405, 703, 1390, 1396, 1454, 1618, 1795
NheI	GCTAGC	2 cut(s)	416, 814
NlaIII	CATG	5 cut(s)	595, 1759, 1896, 1964, 2015
NmeAIII	GCCGAG	1 cut(s)	1407
NmuCI	GTSAC	2 cut(s)	13, 376
PaqCI	CACCTGC	2 cut(s)	1622, 1816
PceI	AGGCCT	1 cut(s)	700
PciSI	GCTCTTC	1 cut(s)	1192
PctI	GAATGC	1 cut(s)	398
PdmI	GAANNNNTTC	1 cut(s)	1700
PfeI	GAWTC	5 cut(s)	472, 478, 514, 1361, 1751
PflFI	GACNNNGTC	1 cut(s)	180
PkrI	GCNGC	7 cut(s)	751, 786, 921, 1204, 1207, 1677, 1764
PleI	GAGTC	2 cut(s)	16, 1011
PpsI	GAGTC	2 cut(s)	16, 1011
PpuMI	RGGWCCY	1 cut(s)	1312
Psp124BI	GAGCTC	1 cut(s)	1597
Psp5II	RGGWCCY	1 cut(s)	1312
Psp6I	CCWGG	2 cut(s)	274, 1308
PspFI	CCCAGC	1 cut(s)	1678
PspGI	CCWGG	2 cut(s)	274, 1308
PspPI	GGNCC	5 cut(s)	1004, 1306, 1312, 1374, 1600
PspPPI	RGGWCCY	1 cut(s)	1312
PstI	CTGCAG	1 cut(s)	786
PsuI	RGATCY	1 cut(s)	1618
PsyI	GACNNNGTC	1 cut(s)	180
PvuII	CAGCTG	1 cut(s)	1678
RsaI	GTAC	5 cut(s)	167, 237, 453, 780, 1517
RsaNI	GTAC	5 cut(s)	166, 236, 452, 779, 1516
RseI	CAYNNNNRTG	3 cut(s)	97, 1965, 1992
SacI	GAGCTC	1 cut(s)	1597
SapI	GCTCTTC	1 cut(s)	1192
SaqAI	TTAA	8 cut(s)	224, 599, 690, 1128, 1169, 1182, 1844, 2046
SatI	GCNGC	7 cut(s)	750, 785, 920, 1203, 1206, 1676, 1763
Sau3AI	GATC	7 cut(s)	405, 703, 1390, 1396, 1454, 1618, 1795
Sau96I	GGNCC	5 cut(s)	1004, 1306, 1312, 1374, 1600
SchI	GAGTC	2 cut(s)	17, 1011
ScrFI	CCNGG	2 cut(s)	276, 1310
SduI	GDGCHC	4 cut(s)	65, 811, 1597, 1685
SfaNI	GCATC	4 cut(s)	115, 1531, 1633, 2047
SfcI	CTRYAG	2 cut(s)	782, 897
SinI	GGWCC	2 cut(s)	1312, 1600
SmiMI	CAYNNNNRTG	3 cut(s)	97, 1965, 1992
SmlI	CTYRAG	4 cut(s)	694, 1059, 1121, 1770
SmoI	CTYRAG	4 cut(s)	694, 1059, 1121, 1770
SseBI	AGGCCT	1 cut(s)	700
SsiI	CCGC	4 cut(s)	443, 962, 2051, 2095
SspMI	CTAG	3 cut(s)	417, 815, 1419
SstI	GAGCTC	1 cut(s)	1597
StuI	AGGCCT	1 cut(s)	700
StyD4I	CCNGG	2 cut(s)	274, 1308
StyI	CCWWGG	1 cut(s)	1755
TaaI	ACNGT	6 cut(s)	96, 382, 1967, 1980, 2080, 2121
TaiI	ACGT	6 cut(s)	368, 562, 683, 908, 1462, 1934
TaqI	TCGA	3 cut(s)	931, 1558, 1928
TatI	WGTACW	5 cut(s)	165, 235, 451, 778, 1515
TfiI	GAWTC	5 cut(s)	472, 478, 514, 1361, 1751
Tru1I	TTAA	8 cut(s)	224, 599, 690, 1128, 1169, 1182, 1844, 2046
Tru9I	TTAA	8 cut(s)	224, 599, 690, 1128, 1169, 1182, 1844, 2046
TscAI	CASTG	5 cut(s)	18, 245, 816, 1525, 1972
TseFI	GTSAC	2 cut(s)	13, 376
TseI	GCWGC	7 cut(s)	749, 784, 919, 1202, 1205, 1675, 1762
Tsp45I	GTSAC	2 cut(s)	13, 376
TspDTI	ATGAA	8 cut(s)	193, 210, 744, 1200, 1857, 1866, 1881, 1965
TspGWI	ACGGA	2 cut(s)	1852, 2006
TspRI	CASTG	5 cut(s)	18, 245, 816, 1525, 1972
Tth111I	GACNNNGTC	1 cut(s)	180
VpaK11BI	GGWCC	2 cut(s)	1312, 1600
XapI	RAATTY	7 cut(s)	199, 495, 578, 672, 826, 1258, 2004
XbaI	TCTAGA	1 cut(s)	1418
XmiI	GTMKAC	1 cut(s)	2082
XmnI	GAANNNNTTC	1 cut(s)	1700
XspI	CTAG	3 cut(s)	417, 815, 1419
ZraI	GACGTC	1 cut(s)	906

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.