Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0003895

Physical Location & Seq

Genomic Coordinates Reverse (-)

22442679 .. 22452483

Gene Structure 9805 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG165400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2340 bp

ATGTTGGAGTCAGTGACTTGTTTTGGAAGCTATAAGGGATACGACATTATCAAACAAAAGAGCCCGTTTATGGCTTGCTCCATAGGCACATCACGGTTCTGTGGGCATTCTTTCAGTCCTTATGTTAGTAACCAGCAAGTGCGCTCGTTATCATATGCCAATAAGTACAAGATAAGACATAGTCCTTTTGTTTCAAGAAATTTCATTCAAGGCAATTCTTCGTTAACTTCCTCTGTACACTGCTGGCGAGGACTTTATTTCTCAAACCATAGACCAGGCCACTCAGCAAGATGGAGGATATATGCAACACTTGATGTTGCCAGCGCTGTTGATGTCATCAATGATTTAGGATTTGATACTTTGACTTTCTTAGCTGTGACTGTTATGGTTGTTCCTGCATTCAAGATCATCAAAGCTAGCCCTATACTCGGTTTCTTTTTTGCGGGGATTGTACTCAATCAGTTTGGCTTGATTCGGAATCTTACAGATGTGAAAATTTTATCAGAATGGGGGATTCTTTTTTTGCTATTTGAGATGGGATTAGAGCTTTCATTTTCACGTCTAAAGGCTCTTGCAAAATTTGCCTTCGGCATGGGATTAACTCAGGTCGTATTATCTACTCTTGCTTTCACGGCATTTGAACTTCCTCCTAATGGGGCTGTTGGAACACAAATTTTGACGTTCCTCTTTAACTCAAGGCCTGATCTGGTCAATATCAGAAGCGTTGATGAAGCAGTGGTGATTGGTGCTGCTCTATCTTTATCTTCCTCAGCTTTTGTACTGCAGAACATAGCGGAGGACAGTATATGGCCAATGCTTTTGAAGGAGAGTTTAAAAGCTCTAGGTGGGCTGGGACTTCTTTCTCTTGGAGGAAAATTAGTTCTTAGGCGAATTTTTGAGTTTGTAGCAGAAGCAAGGAGCTCAGAGGCATTTGTTGCCCTTTGCTTACTGACAGTGGCTGGGACATCACTTGTCACCCAGAAGTTGGGGTTCAGTGATACGCTTGGAGCATTTTTGGCTGGAGCACTGCTAGCAGAAACAAATTTCCGGACACAAATTGAAGCTGATATAAGGCCATTTAGAGGCTTACTTCTGGGGTTATTTTTTGTAACTACAGGGACGTCCATTGACACGCAGCTTCTTTTTCGAGAGTGGCCGAATGTGCTTTCACTCTTGGCAGGTTTGATTGTCATCAAGACGCTGATAATAACAGCGATAGGCCCTCGTGTTGGACTCACTTTACAAGAAAGTGTAAGAATAGGATTGCTTTTGTCTCAAGGAGGGGAGTTTGGCTTTGTAGTTTTTTCTCTTGCAAACAGGCTTGGTGTGCTACCACTTGAGCTTAACAAGTTGCTCATAATTGTTGTTGTCCTGTCAATGGCATTAACCCCATTGCTTAATGAAGCTGGAAGAAGAGCTGCTGCATATATTGATGACAATTTTGAAGCAGAGGATAAAGTTCCTGATGTGGTGAATTTCAATTCAAGTGAACCTGTTGTTATTCTTGGATTTGGACAAATGGGCCAGGTCCTTGCCAATTTCTTGTCCACTCCATTGGCTTCAGGAATAGATGGAGATGCTCTGGGATGGCCCTATGTAGCTTTTGATCTTGATCCATCTGTCGTGAAGGGGTCTAGAAAGCTCGGCTTTCCAATTCTTTACGGGGATGGATCACGTCCTGATGTTTTGCAATCTGCTGGTATATCTCTCCCAAAAGCTGTCTTGGTTATGTACACTGCAAGGGAGAAAACAATTGATGCCGTTCAAAGGCTTCGACTTGCTTTCCCTTCAATCCCTATTTATGCCAGAGCTCTGGACCTGAAGCACCTTTTAGATCTGAAAAAAGCAGGTGCAACAGATGCCATTATGGAAAGTGCAGAGACAAGTTTGCAGCTGGGCTCTAAGCTTTTGAAAGGGTTCGGTGTTATGTCTGATGATGTGAACTTTCTTCGTCAAATTGTTCGTGATTCCATGGAGCTGCAAGCTCAAGAAGTAGTCGGGAAAACTGATGATCAAGACTTGAATAATTTGAAGTCATTGCAGGTGAGAGTTGCTGACTTAATTGATGACCCCTCATCCATTTCATCAACTTCATCGGAAGACAATTCATGGGAGGTAAACAAGGTGGGTGCTTCTTATATCTCGACGTTGCAGGGAGATGTAGATGAAGCAGAGCATGACAGTGAACTCCAACGGTCAGGGCATACGGATGGTGAAGAAATTTCGCATGGTAACTTAGACACAAAGAATGGGTTTCCAGTTAAACCGCAAGATGCTGAGGGGGAGATAAATACAGTAGACCCATCATCCCGCCGTGTAACGACTAAGGAAGAACAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006810 GO:0006811 GO:0006812 GO:0006996 GO:0008150 GO:0008324 GO:0009314 GO:0009416 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009628 GO:0009642 GO:0009643 GO:0009657 GO:0009658 GO:0009893 GO:0009987 GO:0010109 GO:0015075 GO:0015318 GO:0016020 GO:0016043 GO:0019222 GO:0022857 GO:0022890 GO:0031323 GO:0031325 GO:0031976 GO:0031984 GO:0034220 GO:0034357 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0055035 GO:0055085 GO:0065007 GO:0071840 GO:0098655 GO:1905157

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger TrkA_N

Protein Analysis

779

Amino Acids

84.65

Weight (kDa)

5.45

Isoelectric Point (pI)

35.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_H_Exchanger	PF00999	126 - 262	5.2e-16	Sodium/hydrogen exchanger, transmembrane
Na_H_Exchanger	PF00999	264 - 467	8.7e-36	Sodium/hydrogen exchanger, transmembrane
TrkA_N	PF02254	499 - 623	1.9e-15	TrkA-N domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003895)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01790 AT1G01790 AT4G04850 AT4G04850
fragaria_vesca	FvH4_2g11000
malus_domestica	MD05G1050600.v1.1 MD10G1058200.v1.1
prunus_persica	Prupe.8G077000_v2.0.a1 Prupe.8G077000_v2.0.a1
pyrus_communis	pycom05g04260 pycom05g04270 pycom10g04490
rosa_chinensis	RchiOBHm_Chr6g0269141 RchiOBHm_Chr6g0269211 RchiOBHm_Chr7g0201951
rosa_laevigata	RLG00000017131
rosa_multiflora	Rmu_co8385553.1_g000001 Rmu_sc0005353.1_g000001
rosa_roxburghii	Rroxscaffold_3G00238290 Rroxscaffold_7G00198940
rosa_rugosa	Rorug05G0148000 Rorug05G0148100 Rorug06G0046600 Rorug06G0046600
rosa_samantha	Rh4DG004100 Rh6AG166300 Rh6BG171900 Rh6CG164800 Rh6CG165400 Rh6DG156300 Rh6DG156400 Rh6DG157000 Rh7AG286500
rosa_wichuraiana	Rw6G014360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1838, 2032
AatII	GACGTC	1 cut(s)	1124
Acc36I	ACCTGC	3 cut(s)	1169, 1838, 2032
AccB7I	CCANNNNNTGG	1 cut(s)	985
AccI	GTMKAC	1 cut(s)	2298
AccIII	TCCGGA	1 cut(s)	1047
AciI	CCGC	4 cut(s)	443, 794, 2267, 2311
AclWI	GGATC	2 cut(s)	1607, 1678
AcoI	YGGCCR	2 cut(s)	809, 1154
AcsI	RAATTY	8 cut(s)	199, 495, 578, 672, 891, 1042, 1474, 2220
AcuI	CTGAAG	2 cut(s)	1545, 1841
AcyI	GRCGYC	1 cut(s)	1121
AfaI	GTAC	5 cut(s)	167, 237, 453, 780, 1733
AfeI	AGCGCT	1 cut(s)	325
AfiI	CCNNNNNNNGG	8 cut(s)	70, 428, 653, 985, 1082, 1229, 1378, 1767
AjiI	CACGTC	2 cut(s)	560, 1676
AjnI	CCWGG	2 cut(s)	274, 1524
AloI	GAACNNNNNNTCC	2 cut(s)	864, 896
Alw21I	GWGCWC	3 cut(s)	923, 1027, 1813
Alw26I	GTCTC	2 cut(s)	1278, 1874
AlwI	GGATC	2 cut(s)	1607, 1678
AlwNI	CAGNNNCTG	1 cut(s)	959
Aor13HI	TCCGGA	1 cut(s)	1047
Aor51HI	AGCGCT	1 cut(s)	325
AoxI	GGCC	8 cut(s)	277, 698, 809, 1073, 1154, 1219, 1522, 1589
ApeKI	GCWGC	6 cut(s)	749, 1135, 1418, 1421, 1891, 1978
ApoI	RAATTY	8 cut(s)	199, 495, 578, 672, 891, 1042, 1474, 2220
Asp700I	GAANNNNTTC	1 cut(s)	1916
AspLEI	GCGC	2 cut(s)	144, 326
AspS9I	GGNCC	5 cut(s)	1220, 1522, 1528, 1590, 1816
AsuHPI	GGTGA	5 cut(s)	751, 967, 1483, 2056, 2225
AsuNHI	GCTAGC	2 cut(s)	416, 1030
AvaII	GGWCC	2 cut(s)	1528, 1816
BalI	TGGCCA	1 cut(s)	811
BanII	GRGCYC	4 cut(s)	65, 923, 1813, 1901
BauI	CACGAG	1 cut(s)	1224
BbsI	GAAGAC	1 cut(s)	2106
Bbv12I	GWGCWC	3 cut(s)	923, 1027, 1813
BbvCI	CCTCAGC	2 cut(s)	769, 2277
BbvI	GCAGC	6 cut(s)	736, 1147, 1405, 1408, 1903, 1965
BccI	CCATC	8 cut(s)	285, 529, 1565, 1581, 1624, 1661, 2204, 2311
BceAI	ACGGC	3 cut(s)	648, 1745, 2298
BciT130I	CCWGG	2 cut(s)	276, 1526
BciVI	GTATCC	1 cut(s)	32
BclI	TGATCA	1 cut(s)	2011
BcoDI	GTCTC	2 cut(s)	1278, 1874
BfaI	CTAG	4 cut(s)	417, 842, 1031, 1635
BfmI	CTRYAG	2 cut(s)	782, 1113
BfoI	RGCGCY	1 cut(s)	327
BfuAI	ACCTGC	3 cut(s)	1169, 1838, 2032
BfuI	GTATCC	1 cut(s)	32
BglII	AGATCT	1 cut(s)	1834
BisI	GCNGC	6 cut(s)	750, 1136, 1419, 1422, 1892, 1979
BlsI	GCNGC	6 cut(s)	751, 1137, 1420, 1423, 1893, 1980
Bme1390I	CCNGG	2 cut(s)	276, 1526
Bme18I	GGWCC	2 cut(s)	1528, 1816
BmgBI	CACGTC	2 cut(s)	560, 1676
BmgT120I	GGNCC	5 cut(s)	1220, 1522, 1528, 1590, 1816
BmrFI	CCNGG	2 cut(s)	276, 1526
BmsI	GCATC	4 cut(s)	1567, 1747, 1849, 2263
BmtI	GCTAGC	2 cut(s)	420, 1034
BpiI	GAAGAC	1 cut(s)	2106
BpmI	CTGGAG	1 cut(s)	1041
Bpu10I	CCTNAGC	2 cut(s)	769, 2277
BpuEI	CTTGAG	4 cut(s)	679, 1260, 1358, 1971
BsaBI	GATNNNNATC	2 cut(s)	1190, 1611
BsaHI	GRCGYC	1 cut(s)	1121
BsaJI	CCNNGG	1 cut(s)	1971
BsaWI	WCCGGW	1 cut(s)	1047
Bsc4I	CCNNNNNNNGG	8 cut(s)	70, 428, 653, 985, 1082, 1229, 1378, 1767
Bse1I	ACTGG	1 cut(s)	2258
Bse3DI	GCAATG	2 cut(s)	1391, 2036
Bse8I	GATNNNNATC	2 cut(s)	1190, 1611
BseAI	TCCGGA	1 cut(s)	1047
BseBI	CCWGG	2 cut(s)	276, 1526
BseDI	CCNNGG	1 cut(s)	1971
BseGI	GGATG	5 cut(s)	1592, 1672, 2075, 2215, 2306
BseJI	GATNNNNATC	2 cut(s)	1190, 1611
BseLI	CCNNNNNNNGG	8 cut(s)	70, 428, 653, 985, 1082, 1229, 1378, 1767
BseMI	GCAATG	2 cut(s)	1391, 2036
BseMII	CTCAG	5 cut(s)	297, 617, 783, 936, 2268
BseNI	ACTGG	1 cut(s)	2258
BseXI	GCAGC	6 cut(s)	736, 1147, 1405, 1408, 1903, 1965
BseYI	CCCAGC	3 cut(s)	850, 959, 1894
BsgI	GTGCAG	1 cut(s)	1896
BshFI	GGCC	8 cut(s)	279, 700, 811, 1075, 1156, 1221, 1524, 1591
BsiHKAI	GWGCWC	3 cut(s)	923, 1027, 1813
BsiSI	CCGG	1 cut(s)	1048
BslFI	GGGAC	3 cut(s)	867, 976, 1132
BslI	CCNNNNNNNGG	8 cut(s)	70, 428, 653, 985, 1082, 1229, 1378, 1767
BsmAI	GTCTC	2 cut(s)	1278, 1874
BsmFI	GGGAC	3 cut(s)	867, 976, 1132
BsmI	GAATGC	2 cut(s)	106, 398
BsnI	GGCC	8 cut(s)	279, 700, 811, 1075, 1156, 1221, 1524, 1591
Bsp1286I	GDGCHC	5 cut(s)	65, 923, 1027, 1813, 1901
Bsp13I	TCCGGA	1 cut(s)	1047
Bsp1407I	TGTACA	2 cut(s)	235, 1731
Bsp143I	GATC	7 cut(s)	405, 703, 1606, 1612, 1670, 1834, 2011
Bsp19I	CCATGG	1 cut(s)	1971
BspACI	CCGC	4 cut(s)	443, 794, 2267, 2311
BspANI	GGCC	8 cut(s)	279, 700, 811, 1075, 1156, 1221, 1524, 1591
BspCNI	CTCAG	5 cut(s)	296, 616, 782, 935, 2269
BspEI	TCCGGA	1 cut(s)	1047
BspMAI	CTGCAG	1 cut(s)	786
BspMI	ACCTGC	3 cut(s)	1169, 1838, 2032
BspOI	GCTAGC	2 cut(s)	420, 1034
BspPI	GGATC	2 cut(s)	1607, 1678
BspQI	GCTCTTC	1 cut(s)	1408
BsrDI	GCAATG	2 cut(s)	1391, 2036
BsrGI	TGTACA	2 cut(s)	235, 1731
BsrI	ACTGG	1 cut(s)	2258
BssECI	CCNNGG	1 cut(s)	1971
BssMI	GATC	7 cut(s)	405, 703, 1606, 1612, 1670, 1834, 2011
BssNI	GRCGYC	1 cut(s)	1121
BssSI	CACGAG	1 cut(s)	1224
BssT1I	CCWWGG	1 cut(s)	1971
Bst2BI	CACGAG	1 cut(s)	1224
Bst2UI	CCWGG	2 cut(s)	276, 1526
Bst4CI	ACNGT	8 cut(s)	96, 382, 803, 955, 2183, 2196, 2296, 2337
Bst6I	CTCTTC	1 cut(s)	1408
BstACI	GRCGYC	1 cut(s)	1121
BstAPI	GCANNNNNTGC	3 cut(s)	581, 935, 1859
BstAUI	TGTACA	2 cut(s)	235, 1731
BstC8I	GCNNGC	6 cut(s)	76, 245, 322, 418, 1032, 1983
BstDSI	CCRYGG	1 cut(s)	1971
BstF5I	GGATG	5 cut(s)	1592, 1672, 2075, 2215, 2306
BstH2I	RGCGCY	1 cut(s)	327
BstHHI	GCGC	2 cut(s)	144, 326
BstKTI	GATC	7 cut(s)	408, 706, 1609, 1615, 1673, 1837, 2014
BstMAI	GTCTC	2 cut(s)	1278, 1874
BstMBI	GATC	7 cut(s)	405, 703, 1606, 1612, 1670, 1834, 2011
BstMWI	GCNNNNNNNGC	9 cut(s)	84, 581, 632, 935, 1016, 1031, 1162, 1327, 1859
BstNI	CCWGG	2 cut(s)	276, 1526
BstSCI	CCNGG	2 cut(s)	274, 1524
BstSFI	CTRYAG	2 cut(s)	782, 1113
BstV1I	GCAGC	6 cut(s)	736, 1147, 1405, 1408, 1903, 1965
BstV2I	GAAGAC	1 cut(s)	2106
BstX2I	RGATCY	1 cut(s)	1834
BstXI	CCANNNNNNTGG	2 cut(s)	1555, 1813
BstYI	RGATCY	1 cut(s)	1834
BsuI	GTATCC	1 cut(s)	32
BsuRI	GGCC	8 cut(s)	279, 700, 811, 1075, 1156, 1221, 1524, 1591
BtgI	CCRYGG	1 cut(s)	1971
BtrI	CACGTC	2 cut(s)	560, 1676
BtsCI	GGATG	5 cut(s)	1592, 1672, 2075, 2215, 2306
BtsI	GCAGTG	4 cut(s)	238, 741, 1025, 1734
BtsIMutI	CAGTG	8 cut(s)	18, 238, 741, 960, 1000, 1025, 1734, 2188
BveI	ACCTGC	3 cut(s)	1169, 1838, 2032
Cac8I	GCNNGC	6 cut(s)	76, 245, 322, 418, 1032, 1983
CaiI	CAGNNNCTG	1 cut(s)	959
CfoI	GCGC	2 cut(s)	144, 326
Cfr13I	GGNCC	5 cut(s)	1220, 1522, 1528, 1590, 1816
CseI	GACGC	1 cut(s)	1207
Csp6I	GTAC	5 cut(s)	166, 236, 452, 779, 1732
CviAII	CATG	5 cut(s)	592, 1972, 2109, 2177, 2228
CviQI	GTAC	5 cut(s)	166, 236, 452, 779, 1732
DpnI	GATC	7 cut(s)	407, 705, 1608, 1614, 1672, 1836, 2013
DpnII	GATC	7 cut(s)	405, 703, 1606, 1612, 1670, 1834, 2011
DraI	TTTAAA	1 cut(s)	834
EaeI	YGGCCR	2 cut(s)	809, 1154
Eam1104I	CTCTTC	1 cut(s)	1408
EarI	CTCTTC	1 cut(s)	1408
Ecl136II	GAGCTC	2 cut(s)	921, 1811
Eco130I	CCWWGG	1 cut(s)	1971
Eco147I	AGGCCT	1 cut(s)	700
Eco24I	GRGCYC	4 cut(s)	65, 923, 1813, 1901
Eco47I	GGWCC	2 cut(s)	1528, 1816
Eco47III	AGCGCT	1 cut(s)	325
Eco53kI	GAGCTC	2 cut(s)	921, 1811
Eco57I	CTGAAG	2 cut(s)	1545, 1841
EcoICRI	GAGCTC	2 cut(s)	921, 1811
EcoO109I	RGGNCCY	2 cut(s)	1220, 1528
EcoRII	CCWGG	2 cut(s)	274, 1524
EcoT14I	CCWWGG	1 cut(s)	1971
EcoT38I	GRGCYC	4 cut(s)	65, 923, 1813, 1901
ErhI	CCWWGG	1 cut(s)	1971
FaeI	CATG	5 cut(s)	595, 1975, 2112, 2180, 2231
FalI	AAGNNNNNCTT	2 cut(s)	1631, 1663
FaqI	GGGAC	3 cut(s)	867, 976, 1132
FatI	CATG	5 cut(s)	591, 1971, 2108, 2176, 2227
FauI	CCCGC	2 cut(s)	436, 2318
FauNDI	CATATG	1 cut(s)	154
FbaI	TGATCA	1 cut(s)	2011
FblI	GTMKAC	1 cut(s)	2298
Fnu4HI	GCNGC	6 cut(s)	750, 1136, 1419, 1422, 1892, 1979
FokI	GGATG	5 cut(s)	1599, 1679, 2062, 2222, 2293
FriOI	GRGCYC	4 cut(s)	65, 923, 1813, 1901
Fsp4HI	GCNGC	6 cut(s)	750, 1136, 1419, 1422, 1892, 1979
FspBI	CTAG	4 cut(s)	417, 842, 1031, 1635
GlaI	GCGC	2 cut(s)	143, 325
GluI	GCNGC	6 cut(s)	750, 1136, 1419, 1422, 1892, 1979
GsaI	CCCAGC	3 cut(s)	854, 963, 1898
GsuI	CTGGAG	1 cut(s)	1041
HaeII	RGCGCY	1 cut(s)	327
HaeIII	GGCC	8 cut(s)	279, 700, 811, 1075, 1156, 1221, 1524, 1591
HapII	CCGG	1 cut(s)	1048
HgaI	GACGC	1 cut(s)	1207
HhaI	GCGC	2 cut(s)	144, 326
Hin1I	GRCGYC	1 cut(s)	1121
Hin1II	CATG	5 cut(s)	595, 1975, 2112, 2180, 2231
Hin6I	GCGC	2 cut(s)	142, 324
HinP1I	GCGC	2 cut(s)	142, 324
HincII	GTYRAC	1 cut(s)	225
HindII	GTYRAC	1 cut(s)	225
HindIII	AAGCTT	1 cut(s)	1904
HinfI	GANTC	6 cut(s)	8, 472, 478, 514, 1233, 1967
HpaI	GTTAAC	1 cut(s)	225
HpaII	CCGG	1 cut(s)	1048
HphI	GGTGA	5 cut(s)	751, 967, 1483, 2056, 2225
Hpy166II	GTNNAC	9 cut(s)	225, 238, 1490, 1548, 1734, 1942, 2119, 2186, 2299
Hpy188I	TCNGA	7 cut(s)	477, 505, 719, 925, 1839, 1933, 2098
Hpy8I	GTNNAC	9 cut(s)	225, 238, 1490, 1548, 1734, 1942, 2119, 2186, 2299
Hpy99I	CGWCG	1 cut(s)	2149
HpyAV	CCTTC	4 cut(s)	595, 817, 1621, 1797
HpyCH4III	ACNGT	8 cut(s)	96, 382, 803, 955, 2183, 2196, 2296, 2337
HpyCH4IV	ACGT	5 cut(s)	559, 680, 1121, 1675, 2147
HpyF10VI	GCNNNNNNNGC	9 cut(s)	84, 581, 632, 935, 1016, 1031, 1162, 1327, 1859
HpySE526I	ACGT	5 cut(s)	559, 680, 1121, 1675, 2147
Hsp92I	GRCGYC	1 cut(s)	1121
Hsp92II	CATG	5 cut(s)	595, 1975, 2112, 2180, 2231
HspAI	GCGC	2 cut(s)	142, 324
Kpn2I	TCCGGA	1 cut(s)	1047
Ksp22I	TGATCA	1 cut(s)	2011
KspAI	GTTAAC	1 cut(s)	225
Kzo9I	GATC	7 cut(s)	405, 703, 1606, 1612, 1670, 1834, 2011
LguI	GCTCTTC	1 cut(s)	1408
LmnI	GCTCC	5 cut(s)	83, 918, 1007, 1022, 1975
Lsp1109I	GCAGC	6 cut(s)	736, 1147, 1405, 1408, 1903, 1965
LweI	GCATC	4 cut(s)	1567, 1747, 1849, 2263
MaeI	CTAG	4 cut(s)	417, 842, 1031, 1635
MaeII	ACGT	5 cut(s)	559, 680, 1121, 1675, 2147
MaeIII	GTNAC	7 cut(s)	13, 128, 376, 973, 1108, 2231, 2317
MalI	GATC	7 cut(s)	407, 705, 1608, 1614, 1672, 1836, 2013
MboI	GATC	7 cut(s)	405, 703, 1606, 1612, 1670, 1834, 2011
MboII	GAAGA	7 cut(s)	210, 756, 1422, 1425, 1940, 2111, 2228
MfeI	CAATTG	1 cut(s)	1752
MflI	RGATCY	1 cut(s)	1834
MhlI	GDGCHC	5 cut(s)	65, 923, 1027, 1813, 1901
MlsI	TGGCCA	1 cut(s)	811
MluNI	TGGCCA	1 cut(s)	811
MlyI	GAGTC	2 cut(s)	17, 1227
MmeI	TCCRAC	3 cut(s)	643, 1210, 2215
Mox20I	TGGCCA	1 cut(s)	811
MroI	TCCGGA	1 cut(s)	1047
MroXI	GAANNNNTTC	1 cut(s)	1916
MscI	TGGCCA	1 cut(s)	811
MseI	TTAA	9 cut(s)	224, 599, 690, 833, 1344, 1385, 1398, 2060, 2262
MslI	CAYNNNNRTG	2 cut(s)	2181, 2208
Msp20I	TGGCCA	1 cut(s)	811
MspA1I	CMGCKG	1 cut(s)	1894
MspI	CCGG	1 cut(s)	1048
MspR9I	CCNGG	2 cut(s)	276, 1526
MunI	CAATTG	1 cut(s)	1752
Mva1269I	GAATGC	2 cut(s)	106, 398
MvaI	CCWGG	2 cut(s)	276, 1526
MwoI	GCNNNNNNNGC	9 cut(s)	84, 581, 632, 935, 1016, 1031, 1162, 1327, 1859
NcoI	CCATGG	1 cut(s)	1971
NdeI	CATATG	1 cut(s)	154
NdeII	GATC	7 cut(s)	405, 703, 1606, 1612, 1670, 1834, 2011
NheI	GCTAGC	2 cut(s)	416, 1030
NlaIII	CATG	5 cut(s)	595, 1975, 2112, 2180, 2231
NmeAIII	GCCGAG	1 cut(s)	1623
NmuCI	GTSAC	3 cut(s)	13, 376, 973
PaqCI	CACCTGC	2 cut(s)	1838, 2032
PceI	AGGCCT	1 cut(s)	700
PciSI	GCTCTTC	1 cut(s)	1408
PctI	GAATGC	2 cut(s)	106, 398
PdmI	GAANNNNTTC	1 cut(s)	1916
PfeI	GAWTC	4 cut(s)	472, 478, 514, 1967
PflFI	GACNNNGTC	1 cut(s)	180
PflMI	CCANNNNNTGG	1 cut(s)	985
PkrI	GCNGC	6 cut(s)	751, 1137, 1420, 1423, 1893, 1980
PleI	GAGTC	2 cut(s)	16, 1227
PpsI	GAGTC	2 cut(s)	16, 1227
PpuMI	RGGWCCY	1 cut(s)	1528
Psp124BI	GAGCTC	2 cut(s)	923, 1813
Psp5II	RGGWCCY	1 cut(s)	1528
Psp6I	CCWGG	2 cut(s)	274, 1524
PspFI	CCCAGC	3 cut(s)	850, 959, 1894
PspGI	CCWGG	2 cut(s)	274, 1524
PspPI	GGNCC	5 cut(s)	1220, 1522, 1528, 1590, 1816
PspPPI	RGGWCCY	1 cut(s)	1528
PstI	CTGCAG	1 cut(s)	786
PstNI	CAGNNNCTG	1 cut(s)	959
PsuI	RGATCY	1 cut(s)	1834
PsyI	GACNNNGTC	1 cut(s)	180
PvuII	CAGCTG	1 cut(s)	1894
RsaI	GTAC	5 cut(s)	167, 237, 453, 780, 1733
RsaNI	GTAC	5 cut(s)	166, 236, 452, 779, 1732
RseI	CAYNNNNRTG	2 cut(s)	2181, 2208
SacI	GAGCTC	2 cut(s)	923, 1813
SapI	GCTCTTC	1 cut(s)	1408
SaqAI	TTAA	9 cut(s)	224, 599, 690, 833, 1344, 1385, 1398, 2060, 2262
SatI	GCNGC	6 cut(s)	750, 1136, 1419, 1422, 1892, 1979
Sau3AI	GATC	7 cut(s)	405, 703, 1606, 1612, 1670, 1834, 2011
Sau96I	GGNCC	5 cut(s)	1220, 1522, 1528, 1590, 1816
SchI	GAGTC	2 cut(s)	17, 1227
ScrFI	CCNGG	2 cut(s)	276, 1526
SduI	GDGCHC	5 cut(s)	65, 923, 1027, 1813, 1901
SfaNI	GCATC	4 cut(s)	1567, 1747, 1849, 2263
SfcI	CTRYAG	2 cut(s)	782, 1113
SinI	GGWCC	2 cut(s)	1528, 1816
SmiMI	CAYNNNNRTG	2 cut(s)	2181, 2208
SmlI	CTYRAG	4 cut(s)	694, 1275, 1337, 1986
SmoI	CTYRAG	4 cut(s)	694, 1275, 1337, 1986
SseBI	AGGCCT	1 cut(s)	700
SsiI	CCGC	4 cut(s)	443, 794, 2267, 2311
SspMI	CTAG	4 cut(s)	417, 842, 1031, 1635
SstI	GAGCTC	2 cut(s)	923, 1813
StuI	AGGCCT	1 cut(s)	700
StyD4I	CCNGG	2 cut(s)	274, 1524
StyI	CCWWGG	1 cut(s)	1971
TaaI	ACNGT	8 cut(s)	96, 382, 803, 955, 2183, 2196, 2296, 2337
TaiI	ACGT	5 cut(s)	562, 683, 1124, 1678, 2150
TaqI	TCGA	3 cut(s)	1147, 1774, 2144
TatI	WGTACW	5 cut(s)	165, 235, 451, 778, 1731
TfiI	GAWTC	4 cut(s)	472, 478, 514, 1967
Tru1I	TTAA	9 cut(s)	224, 599, 690, 833, 1344, 1385, 1398, 2060, 2262
Tru9I	TTAA	9 cut(s)	224, 599, 690, 833, 1344, 1385, 1398, 2060, 2262
TscAI	CASTG	8 cut(s)	18, 245, 741, 960, 1000, 1032, 1741, 2188
TseFI	GTSAC	3 cut(s)	13, 376, 973
TseI	GCWGC	6 cut(s)	749, 1135, 1418, 1421, 1891, 1978
Tsp45I	GTSAC	3 cut(s)	13, 376, 973
TspDTI	ATGAA	8 cut(s)	193, 540, 744, 1416, 2073, 2082, 2097, 2181
TspGWI	ACGGA	1 cut(s)	2222
TspRI	CASTG	8 cut(s)	18, 245, 741, 960, 1000, 1032, 1741, 2188
Tth111I	GACNNNGTC	1 cut(s)	180
Van91I	CCANNNNNTGG	1 cut(s)	985
VpaK11BI	GGWCC	2 cut(s)	1528, 1816
XapI	RAATTY	8 cut(s)	199, 495, 578, 672, 891, 1042, 1474, 2220
XbaI	TCTAGA	1 cut(s)	1634
XmiI	GTMKAC	1 cut(s)	2298
XmnI	GAANNNNTTC	1 cut(s)	1916
XspI	CTAG	4 cut(s)	417, 842, 1031, 1635
ZraI	GACGTC	1 cut(s)	1122

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.