Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0003895

Physical Location & Seq

Genomic Coordinates Forward (+)

5007428 .. 5015411

Gene Structure 7984 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g04260.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1455 bp

ATGGGATTAACTCAGGTCGTATTATCTACTCTTGCTTTCACAGCCTTCGAACTTCCACCTAATGGTGCTGTTGGAACCCAAATTTTGACGTTCCTCTTTAACTCAAGGCCTGATTTGGTCAACATCAGAAGCATTGATGAAGCCGTAGTGATTGGTGCTGCTCTCTCTCTGTCTTCTTCAGCTTTTGTACTTCAGCTACTTGCAGAGAAAGGTGAACTCCCTACAAGATTTGGGTCCGCAACTCTAGGGATACTTCTTCTACAGGACATAGCAGTTGTACCTCTCTTAGTCATACTTCCAGTGCTGGAAAGTCAGAACCTAGCAGAGGAAAGTATATGGCCAACGCTTCTGAAGGAAAGTCTAAAAGCCTTAGGTGGACTTGGTATTCTTTCTCTTGGAGGAAAATTCCTTCTTAGACGAGTTTTTGAGTTTGTGGCAGAAGCAAGGAGCTCTGAGGCTTTTGTTGCACTTTGCTTATTGACAGTTGCAGGGACCTCACTTCTCACCCAGAAGTTGGGTTTCAGTGATACGCTTGGAGCTTTTTTGGCTGGAGCACTGTTAGCGGAAACAAATTTCCGGACACAAATTGAAGCTGATATAAGGCCATTTCGAGGCTTACTTCTTGGATTATTTTTTGTAACTACAGGGACATCCATTGACATGCCGCTTTTGTTCCGAGAGTGGCCGAATGTGCTTACACTCTTGGCAGGTTTGATTGTCATCAAGACACTGATAATAACAGCCATAGGCCCTCGTGTTGGACTTACCTTACAGGAAAGTGTAAGAATAGGGCTGCTTCTATCTCAGGGAGGCGAGTTTGGATTTGTTGTTTTTTCGCTTGCAAATAGGCTTGGTGTGCTGCCACTCGAGCTTAACAAGTTGCTTATAATTGTTGTTGTCTTGTCAATGGCATTGACCCCATTGCTTAATGAAGCTGGAAGAAGGGCTGCTGAATTGATTGACGACAAATTTGGTGCCGAGGATAAAACTACTGAGGTGGTGAACTTTGATTCAAGTGAACCTGTTGTTATTCTTGGATTTGGACAAATGGGCCAGGTCCTTGCCAATTTCTTGTCCACTCCATTGGCATCTGGGATAGATAGCGATAATCTGGGATTGCCGTTCGTAGCTTTTGATATGGATCCTTCTGTGGTGAAGGCGTCCAGGAAACTTGGTTTTCCAATTCTGTATGGGGATGGATCACGTCCAGCAGTTTTGCAATCTGCTGGCATCTCTTCCCCCAAAGCCGTCATGGTTTTGTACACTGCAAGGAGTAGAACTACTGAGGCCATTCAAAGGCTTCGACTTGCTTTCCCAGCGTCCTATTTATGCCCGAGCTCTGGATCTCAAGCACCTTTTAGAACTGAAGAAATCAGGTGCAACGGATGCTATCCTGGAAAGTGCAGAGACGAGTTTGCAGCTGGGCTCCAAGCTTTTGAAAGGGTTTGGAGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006810 GO:0006811 GO:0006812 GO:0006996 GO:0008150 GO:0008324 GO:0009314 GO:0009416 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009628 GO:0009642 GO:0009643 GO:0009657 GO:0009658 GO:0009893 GO:0009987 GO:0010109 GO:0015075 GO:0015318 GO:0016020 GO:0016043 GO:0019222 GO:0022857 GO:0022890 GO:0031323 GO:0031325 GO:0031976 GO:0031984 GO:0034220 GO:0034357 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0055035 GO:0055085 GO:0065007 GO:0071840 GO:0098655 GO:1905157

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger TrkA_N

Protein Analysis

485

Amino Acids

51.78

Weight (kDa)

5.21

Isoelectric Point (pI)

41.24

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003895)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01790 AT1G01790 AT4G04850 AT4G04850
fragaria_vesca	FvH4_2g11000
malus_domestica	MD05G1050600.v1.1 MD10G1058200.v1.1
prunus_persica	Prupe.8G077000_v2.0.a1 Prupe.8G077000_v2.0.a1
pyrus_communis	pycom05g04260 pycom05g04270 pycom10g04490
rosa_chinensis	RchiOBHm_Chr6g0269141 RchiOBHm_Chr6g0269211 RchiOBHm_Chr7g0201951
rosa_laevigata	RLG00000017131
rosa_multiflora	Rmu_co8385553.1_g000001 Rmu_sc0005353.1_g000001
rosa_roxburghii	Rroxscaffold_3G00238290 Rroxscaffold_7G00198940
rosa_rugosa	Rorug05G0148000 Rorug05G0148100 Rorug06G0046600 Rorug06G0046600
rosa_samantha	Rh4DG004100 Rh6AG166300 Rh6BG171900 Rh6CG164800 Rh6CG165400 Rh6DG156300 Rh6DG156400 Rh6DG157000 Rh7AG286500
rosa_wichuraiana	Rw6G014360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	887
Acc36I	ACCTGC	1 cut(s)	698
AccB1I	GGYRCC	1 cut(s)	974
AccB7I	CCANNNNNTGG	2 cut(s)	62, 514
AccIII	TCCGGA	1 cut(s)	576
AciI	CCGC	3 cut(s)	237, 563, 665
AclWI	GGATC	4 cut(s)	1136, 1149, 1207, 1351
AcoI	YGGCCR	2 cut(s)	338, 683
AcsI	RAATTY	4 cut(s)	81, 404, 571, 968
AcuI	CTGAAG	4 cut(s)	162, 176, 371, 1386
AcyI	GRCGYC	1 cut(s)	1160
AfaI	GTAC	3 cut(s)	189, 279, 1262
AfiI	CCNNNNNNNGG	7 cut(s)	62, 325, 514, 611, 758, 1296, 1340
AgsI	TTSAA	4 cut(s)	590, 1014, 1295, 1439
AjiI	CACGTC	1 cut(s)	1205
AjnI	CCWGG	3 cut(s)	1053, 1163, 1393
Alw21I	GWGCWC	3 cut(s)	452, 556, 1340
Alw26I	GTCTC	1 cut(s)	1401
AlwI	GGATC	4 cut(s)	1136, 1149, 1207, 1351
Ama87I	CYCGRG	2 cut(s)	866, 1333
Aor13HI	TCCGGA	1 cut(s)	576
AoxI	GGCC	7 cut(s)	107, 338, 602, 683, 748, 1051, 1287
ApeKI	GCWGC	5 cut(s)	158, 793, 859, 947, 1418
ApoI	RAATTY	4 cut(s)	81, 404, 571, 968
ArsI	GACNNNNNNTTYG	2 cut(s)	953, 985
AspS9I	GGNCC	5 cut(s)	234, 492, 749, 1051, 1057
AsuHPI	GGTGA	4 cut(s)	224, 496, 1012, 1165
AsuII	TTCGAA	1 cut(s)	48
AvaI	CYCGRG	2 cut(s)	866, 1333
AvaII	GGWCC	3 cut(s)	234, 492, 1057
AxyI	CCTNAGG	1 cut(s)	370
BalI	TGGCCA	1 cut(s)	340
BamHI	GGATCC	1 cut(s)	1141
BanI	GGYRCC	1 cut(s)	974
BanII	GRGCYC	3 cut(s)	452, 1340, 1428
BauI	CACGAG	1 cut(s)	753
BbsI	GAAGAC	1 cut(s)	165
Bbv12I	GWGCWC	3 cut(s)	452, 556, 1340
BbvI	GCAGC	5 cut(s)	145, 780, 846, 934, 1430
BccI	CCATC	1 cut(s)	1190
BceAI	ACGGC	3 cut(s)	128, 1105, 1232
BciT130I	CCWGG	3 cut(s)	1055, 1165, 1395
BciVI	GTATCC	1 cut(s)	243
BcoDI	GTCTC	1 cut(s)	1401
BfaI	CTAG	2 cut(s)	245, 320
BfmI	CTRYAG	2 cut(s)	260, 642
BfuAI	ACCTGC	1 cut(s)	698
BfuI	GTATCC	1 cut(s)	243
BisI	GCNGC	6 cut(s)	159, 665, 794, 860, 948, 1419
BlsI	GCNGC	6 cut(s)	160, 666, 795, 861, 949, 1420
Bme1390I	CCNGG	3 cut(s)	1055, 1165, 1395
Bme18I	GGWCC	3 cut(s)	234, 492, 1057
BmeT110I	CYCGRG	2 cut(s)	866, 1333
BmgBI	CACGTC	1 cut(s)	1205
BmgT120I	GGNCC	5 cut(s)	234, 492, 749, 1051, 1057
BmiI	GGNNCC	6 cut(s)	76, 235, 493, 976, 1143, 1427
BmrFI	CCNGG	3 cut(s)	1055, 1165, 1395
BmsI	GCATC	3 cut(s)	1097, 1239, 1376
BpiI	GAAGAC	1 cut(s)	165
BpmI	CTGGAG	1 cut(s)	570
Bpu14I	TTCGAA	1 cut(s)	48
BpuEI	CTTGAG	2 cut(s)	88, 1332
BsaBI	GATNNNNATC	2 cut(s)	719, 1140
BsaHI	GRCGYC	1 cut(s)	1160
BsaJI	CCNNGG	1 cut(s)	978
BsaWI	WCCGGW	1 cut(s)	576
Bsc4I	CCNNNNNNNGG	7 cut(s)	62, 325, 514, 611, 758, 1296, 1340
Bse1I	ACTGG	1 cut(s)	299
Bse21I	CCTNAGG	1 cut(s)	370
Bse3DI	GCAATG	1 cut(s)	920
Bse8I	GATNNNNATC	2 cut(s)	719, 1140
BseAI	TCCGGA	1 cut(s)	576
BseBI	CCWGG	3 cut(s)	1055, 1165, 1395
BseDI	CCNNGG	1 cut(s)	978
BseGI	GGATG	3 cut(s)	650, 1201, 1391
BseJI	GATNNNNATC	2 cut(s)	719, 1140
BseLI	CCNNNNNNNGG	7 cut(s)	62, 325, 514, 611, 758, 1296, 1340
BseMI	GCAATG	1 cut(s)	920
BseMII	CTCAG	5 cut(s)	26, 444, 818, 984, 1275
BseNI	ACTGG	1 cut(s)	299
BseXI	GCAGC	5 cut(s)	145, 780, 846, 934, 1430
BseYI	CCCAGC	2 cut(s)	1315, 1421
BsgI	GTGCAG	1 cut(s)	1423
BshFI	GGCC	7 cut(s)	109, 340, 604, 685, 750, 1053, 1289
BshNI	GGYRCC	1 cut(s)	974
BsiHKAI	GWGCWC	3 cut(s)	452, 556, 1340
BsiHKCI	CYCGRG	2 cut(s)	866, 1333
BsiSI	CCGG	1 cut(s)	577
BslFI	GGGAC	2 cut(s)	505, 661
BslI	CCNNNNNNNGG	7 cut(s)	62, 325, 514, 611, 758, 1296, 1340
BsmAI	GTCTC	1 cut(s)	1401
BsmBI	CGTCTC	1 cut(s)	1401
BsmFI	GGGAC	2 cut(s)	505, 661
BsnI	GGCC	7 cut(s)	109, 340, 604, 685, 750, 1053, 1289
BsoBI	CYCGRG	2 cut(s)	866, 1333
Bsp119I	TTCGAA	1 cut(s)	48
Bsp1286I	GDGCHC	4 cut(s)	452, 556, 1340, 1428
Bsp13I	TCCGGA	1 cut(s)	576
Bsp1407I	TGTACA	1 cut(s)	1260
Bsp143I	GATC	3 cut(s)	1141, 1199, 1343
BspACI	CCGC	3 cut(s)	237, 563, 665
BspANI	GGCC	7 cut(s)	109, 340, 604, 685, 750, 1053, 1289
BspCNI	CTCAG	5 cut(s)	25, 445, 817, 985, 1276
BspEI	TCCGGA	1 cut(s)	576
BspLI	GGNNCC	6 cut(s)	76, 235, 493, 976, 1143, 1427
BspMI	ACCTGC	1 cut(s)	698
BspPI	GGATC	4 cut(s)	1136, 1149, 1207, 1351
BspT104I	TTCGAA	1 cut(s)	48
BspT107I	GGYRCC	1 cut(s)	974
BsrDI	GCAATG	1 cut(s)	920
BsrGI	TGTACA	1 cut(s)	1260
BsrI	ACTGG	1 cut(s)	299
BssECI	CCNNGG	1 cut(s)	978
BssMI	GATC	3 cut(s)	1141, 1199, 1343
BssNI	GRCGYC	1 cut(s)	1160
BssSI	CACGAG	1 cut(s)	753
Bst2BI	CACGAG	1 cut(s)	753
Bst2UI	CCWGG	3 cut(s)	1055, 1165, 1395
Bst4CI	ACNGT	2 cut(s)	484, 558
Bst6I	CTCTTC	1 cut(s)	1240
BstACI	GRCGYC	1 cut(s)	1160
BstAPI	GCANNNNNTGC	1 cut(s)	1386
BstAUI	TGTACA	1 cut(s)	1260
BstBI	TTCGAA	1 cut(s)	48
BstC8I	GCNNGC	2 cut(s)	840, 1228
BstDEI	CTNAG	8 cut(s)	12, 286, 370, 413, 453, 804, 993, 1284
BstENI	CCTNNNNNAGG	1 cut(s)	323
BstF5I	GGATG	3 cut(s)	650, 1201, 1391
BstKTI	GATC	3 cut(s)	1144, 1202, 1346
BstMAI	GTCTC	1 cut(s)	1401
BstMBI	GATC	3 cut(s)	1141, 1199, 1343
BstMWI	GCNNNNNNNGC	9 cut(s)	41, 464, 545, 560, 691, 856, 868, 1316, 1386
BstNI	CCWGG	3 cut(s)	1055, 1165, 1395
BstNSI	RCATGY	1 cut(s)	664
BstSCI	CCNGG	3 cut(s)	1053, 1163, 1393
BstSFI	CTRYAG	2 cut(s)	260, 642
BstV1I	GCAGC	5 cut(s)	145, 780, 846, 934, 1430
BstV2I	GAAGAC	1 cut(s)	165
BstX2I	RGATCY	2 cut(s)	1141, 1343
BstXI	CCANNNNNNTGG	1 cut(s)	1084
BstYI	RGATCY	2 cut(s)	1141, 1343
Bsu36I	CCTNAGG	1 cut(s)	370
BsuI	GTATCC	1 cut(s)	243
BsuRI	GGCC	7 cut(s)	109, 340, 604, 685, 750, 1053, 1289
BtrI	CACGTC	1 cut(s)	1205
BtsCI	GGATG	3 cut(s)	650, 1201, 1391
BtsI	GCAGTG	1 cut(s)	1263
BtsIMutI	CAGTG	5 cut(s)	306, 529, 554, 728, 1263
BveI	ACCTGC	1 cut(s)	698
Cac8I	GCNNGC	2 cut(s)	840, 1228
Cfr13I	GGNCC	5 cut(s)	234, 492, 749, 1051, 1057
CseI	GACGC	2 cut(s)	1149, 1308
Csp6I	GTAC	3 cut(s)	188, 278, 1261
CviAII	CATG	2 cut(s)	661, 1252
CviQI	GTAC	3 cut(s)	188, 278, 1261
DdeI	CTNAG	8 cut(s)	12, 286, 370, 413, 453, 804, 993, 1284
DpnI	GATC	3 cut(s)	1143, 1201, 1345
DpnII	GATC	3 cut(s)	1141, 1199, 1343
EaeI	YGGCCR	2 cut(s)	338, 683
Eam1104I	CTCTTC	1 cut(s)	1240
EarI	CTCTTC	1 cut(s)	1240
Ecl136II	GAGCTC	2 cut(s)	450, 1338
Eco147I	AGGCCT	1 cut(s)	109
Eco24I	GRGCYC	3 cut(s)	452, 1340, 1428
Eco47I	GGWCC	3 cut(s)	234, 492, 1057
Eco53kI	GAGCTC	2 cut(s)	450, 1338
Eco57I	CTGAAG	4 cut(s)	162, 176, 371, 1386
Eco81I	CCTNAGG	1 cut(s)	370
Eco88I	CYCGRG	2 cut(s)	866, 1333
EcoICRI	GAGCTC	2 cut(s)	450, 1338
EcoNI	CCTNNNNNAGG	1 cut(s)	323
EcoO109I	RGGNCCY	3 cut(s)	492, 749, 1057
EcoRII	CCWGG	3 cut(s)	1053, 1163, 1393
EcoT38I	GRGCYC	3 cut(s)	452, 1340, 1428
Esp3I	CGTCTC	1 cut(s)	1401
FaeI	CATG	2 cut(s)	664, 1255
FaqI	GGGAC	2 cut(s)	505, 661
FatI	CATG	2 cut(s)	660, 1251
Fnu4HI	GCNGC	6 cut(s)	159, 665, 794, 860, 948, 1419
FokI	GGATG	3 cut(s)	637, 1208, 1398
FriOI	GRGCYC	3 cut(s)	452, 1340, 1428
Fsp4HI	GCNGC	6 cut(s)	159, 665, 794, 860, 948, 1419
FspBI	CTAG	2 cut(s)	245, 320
GluI	GCNGC	6 cut(s)	159, 665, 794, 860, 948, 1419
GsaI	CCCAGC	2 cut(s)	1319, 1425
GsuI	CTGGAG	1 cut(s)	570
HaeIII	GGCC	7 cut(s)	109, 340, 604, 685, 750, 1053, 1289
HapII	CCGG	1 cut(s)	577
HgaI	GACGC	2 cut(s)	1149, 1308
Hin1I	GRCGYC	1 cut(s)	1160
Hin1II	CATG	2 cut(s)	664, 1255
HincII	GTYRAC	1 cut(s)	121
HindII	GTYRAC	1 cut(s)	121
HindIII	AAGCTT	1 cut(s)	1431
HinfI	GANTC	1 cut(s)	1010
HpaII	CCGG	1 cut(s)	577
HphI	GGTGA	4 cut(s)	224, 496, 1012, 1165
Hpy166II	GTNNAC	7 cut(s)	121, 215, 377, 1003, 1019, 1077, 1263
Hpy188I	TCNGA	5 cut(s)	128, 315, 351, 454, 677
Hpy188III	TCNNGA	3 cut(s)	577, 724, 1341
Hpy8I	GTNNAC	7 cut(s)	121, 215, 377, 1003, 1019, 1077, 1263
HpyAV	CCTTC	6 cut(s)	55, 346, 419, 936, 1150, 1155
HpyCH4III	ACNGT	2 cut(s)	484, 558
HpyCH4IV	ACGT	2 cut(s)	89, 1204
HpyCH4V	TGCA	9 cut(s)	203, 467, 488, 842, 1219, 1268, 1380, 1404, 1418
HpyF10VI	GCNNNNNNNGC	9 cut(s)	41, 464, 545, 560, 691, 856, 868, 1316, 1386
HpyF3I	CTNAG	8 cut(s)	12, 286, 370, 413, 453, 804, 993, 1284
HpySE526I	ACGT	2 cut(s)	89, 1204
Hsp92I	GRCGYC	1 cut(s)	1160
Hsp92II	CATG	2 cut(s)	664, 1255
Kpn2I	TCCGGA	1 cut(s)	576
Kzo9I	GATC	3 cut(s)	1141, 1199, 1343
LmnI	GCTCC	4 cut(s)	447, 536, 551, 1431
Lsp1109I	GCAGC	5 cut(s)	145, 780, 846, 934, 1430
LweI	GCATC	3 cut(s)	1097, 1239, 1376
MaeI	CTAG	2 cut(s)	245, 320
MaeII	ACGT	2 cut(s)	89, 1204
MaeIII	GTNAC	1 cut(s)	637
MalI	GATC	3 cut(s)	1143, 1201, 1345
MboI	GATC	3 cut(s)	1141, 1199, 1343
MboII	GAAGA	6 cut(s)	165, 168, 248, 951, 1227, 1379
MflI	RGATCY	2 cut(s)	1141, 1343
MhlI	GDGCHC	4 cut(s)	452, 556, 1340, 1428
MlsI	TGGCCA	1 cut(s)	340
MluCI	AATT	9 cut(s)	81, 404, 571, 585, 888, 953, 968, 1066, 1182
MluNI	TGGCCA	1 cut(s)	340
MmeI	TCCRAC	2 cut(s)	52, 739
Mox20I	TGGCCA	1 cut(s)	340
MroI	TCCGGA	1 cut(s)	576
MscI	TGGCCA	1 cut(s)	340
MseI	TTAA	4 cut(s)	8, 99, 873, 927
MslI	CAYNNNNRTG	1 cut(s)	659
Msp20I	TGGCCA	1 cut(s)	340
MspA1I	CMGCKG	1 cut(s)	1421
MspI	CCGG	1 cut(s)	577
MspR9I	CCNGG	3 cut(s)	1055, 1165, 1395
MvaI	CCWGG	3 cut(s)	1055, 1165, 1395
MwoI	GCNNNNNNNGC	9 cut(s)	41, 464, 545, 560, 691, 856, 868, 1316, 1386
NdeII	GATC	3 cut(s)	1141, 1199, 1343
NlaIII	CATG	2 cut(s)	664, 1255
NlaIV	GGNNCC	6 cut(s)	76, 235, 493, 976, 1143, 1427
NmeAIII	GCCGAG	1 cut(s)	1003
NspI	RCATGY	1 cut(s)	664
NspV	TTCGAA	1 cut(s)	48
PaeR7I	CTCGAG	1 cut(s)	866
PceI	AGGCCT	1 cut(s)	109
PfeI	GAWTC	1 cut(s)	1010
PflMI	CCANNNNNTGG	2 cut(s)	62, 514
PfoI	TCCNGGA	2 cut(s)	1163, 1393
PkrI	GCNGC	6 cut(s)	160, 666, 795, 861, 949, 1420
PpuMI	RGGWCCY	2 cut(s)	492, 1057
PsiI	TTATAA	1 cut(s)	887
Psp124BI	GAGCTC	2 cut(s)	452, 1340
Psp5II	RGGWCCY	2 cut(s)	492, 1057
Psp6I	CCWGG	3 cut(s)	1053, 1163, 1393
PspFI	CCCAGC	2 cut(s)	1315, 1421
PspGI	CCWGG	3 cut(s)	1053, 1163, 1393
PspN4I	GGNNCC	6 cut(s)	76, 235, 493, 976, 1143, 1427
PspPI	GGNCC	5 cut(s)	234, 492, 749, 1051, 1057
PspPPI	RGGWCCY	2 cut(s)	492, 1057
PspXI	VCTCGAGB	1 cut(s)	866
PsuI	RGATCY	2 cut(s)	1141, 1343
PvuII	CAGCTG	1 cut(s)	1421
RsaI	GTAC	3 cut(s)	189, 279, 1262
RsaNI	GTAC	3 cut(s)	188, 278, 1261
RseI	CAYNNNNRTG	1 cut(s)	659
SacI	GAGCTC	2 cut(s)	452, 1340
SaqAI	TTAA	4 cut(s)	8, 99, 873, 927
SatI	GCNGC	6 cut(s)	159, 665, 794, 860, 948, 1419
Sau3AI	GATC	3 cut(s)	1141, 1199, 1343
Sau96I	GGNCC	5 cut(s)	234, 492, 749, 1051, 1057
ScrFI	CCNGG	3 cut(s)	1055, 1165, 1395
SduI	GDGCHC	4 cut(s)	452, 556, 1340, 1428
SfaNI	GCATC	3 cut(s)	1097, 1239, 1376
SfcI	CTRYAG	2 cut(s)	260, 642
Sfr274I	CTCGAG	1 cut(s)	866
SfuI	TTCGAA	1 cut(s)	48
SinI	GGWCC	3 cut(s)	234, 492, 1057
SlaI	CTCGAG	1 cut(s)	866
SmiMI	CAYNNNNRTG	1 cut(s)	659
SmlI	CTYRAG	3 cut(s)	103, 866, 1347
SmoI	CTYRAG	3 cut(s)	103, 866, 1347
Sse9I	AATT	9 cut(s)	81, 404, 571, 585, 888, 953, 968, 1066, 1182
SseBI	AGGCCT	1 cut(s)	109
SsiI	CCGC	3 cut(s)	237, 563, 665
SspMI	CTAG	2 cut(s)	245, 320
SstI	GAGCTC	2 cut(s)	452, 1340
StuI	AGGCCT	1 cut(s)	109
StyD4I	CCNGG	3 cut(s)	1053, 1163, 1393
TaaI	ACNGT	2 cut(s)	484, 558
TaiI	ACGT	2 cut(s)	92, 1207
TaqI	TCGA	4 cut(s)	48, 610, 867, 1303
TasI	AATT	9 cut(s)	81, 404, 571, 585, 888, 953, 968, 1066, 1182
TatI	WGTACW	2 cut(s)	187, 1260
TauI	GCSGC	1 cut(s)	667
TfiI	GAWTC	1 cut(s)	1010
Tru1I	TTAA	4 cut(s)	8, 99, 873, 927
Tru9I	TTAA	4 cut(s)	8, 99, 873, 927
TscAI	CASTG	5 cut(s)	306, 529, 561, 735, 1270
TseI	GCWGC	5 cut(s)	158, 793, 859, 947, 1418
TspDTI	ATGAA	2 cut(s)	153, 945
TspGWI	ACGGA	1 cut(s)	1398
TspRI	CASTG	5 cut(s)	306, 529, 561, 735, 1270
Van91I	CCANNNNNTGG	2 cut(s)	62, 514
VpaK11BI	GGWCC	3 cut(s)	234, 492, 1057
XagI	CCTNNNNNAGG	1 cut(s)	323
XapI	RAATTY	4 cut(s)	81, 404, 571, 968
XceI	RCATGY	1 cut(s)	664
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1249
XhoI	CTCGAG	1 cut(s)	866
XspI	CTAG	2 cut(s)	245, 320

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.