Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000897

Physical Location & Seq

Genomic Coordinates Forward (+)

5398926 .. 5402733

Gene Structure 3808 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G15690.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2313 bp

ATGGTGGCGCCTGCTTTGTTACCGGAGCTCTGGACGGAGATCCTTGTACCGATTTGTGCGGTGATTGGTATCGCCTTTTCGCTTTTCCAATGGTACGTTGTATCTCGCGTGAAACTCACCTCTGACCTCGGCGCATCGTCTTCCGGTGGAGCTAACAATGGGAAGAATGGATACGGTGATTATCTAATCGAGGAAGAGGAAGGTGTTAATGACCAGAGTGTTGTCGCTAAGTGCGCTGAGATTCAGACTGCTATTTCCGAAGGTGCAACTTCATTCCTATTCACGGAGTACAAATATGTTGGTGTCTTCATGATTTTCTTTGCTGCTGTTATCTTTGTTTTCCTCGGCTCTGTTGAGGGATTCAGCACTGATAACAAGCCTTGTACTTACGACACCACCAGAACCTGCAAGCCTGCATTGGCTACTGCAGCTTTCAGTACCATTGCTTTCGTGCTTGGTGCTGTTACCTCTGTTCTATCTGGTTTCCTTGGGATGAAGATTGCTACATACGCTAATGCTAGGACCACTTTGGAGGCGAGGAAAGGTGTTGGAAAGGCGTTCATTGTTGCATTCAGGTCTGGTGCTGTGATGGGTTTCCTTCTTGCAGCGAGTGGTCTATTGGTGCTTTACATTACTATCAATGTGTTCAAGATCTATTACGGAGATGACTGGGAAGGTCTTTTTGAGGCTATTACTGGTTATGGTCTTGGTGGGTCTTCCATGGCTCTCTTTGGCCGTGTTGGTGGTGGGATCTACACTAAGGCTGCTGATGTCGGCGCTGACCTTGTCGGTAAAATTGAGAGGAATATTCCAGAGGATGATCCAAGAAACCCAGCTGTCATTGCTGATAATGTCGGTGACAATGTTGGTGACATTGCTGGTATGGGATCTGATCTCTTTGGATCATATGCTGAAGCATCATGCGCTGCTCTTGTTGTTGCCTCGATCTCATCTTTCGGAATCAACCACGACTTCACTGCCATGTGCTACCCATTGCTCATCAGTTCAATGGGAATCTTGGTTTGTTTGATCACAACTCTCTTTGCCACTGACTTCTTTGAGATTAAGCTTGTCAAGGAGATTGAACCAGCATTGAAGAACCAGCTCATTATCTCAACTGTTATTATGACTGTTGGTATTGCTATTGTGTCATGGGTTGGCTTACCGACCTCCTTTACCATCTTCAACTTTGGAACACAAAAAGTTGTCAAGAACTGGCAGCTATTCCTTTGTGTTTGTGTTGGTCTTTGGGCTGGACTCATTATTGGTTTCGTCACTGAGTACTACACTAGTAACGCCTACAGCCCTGTGCAAGATGTTGCAGATTCATGCAGAACTGGTGCAGCTACCAATGTTATCTTCGGCCTTGCTCTTGGTTACAAATCCGTCATTATTCCAATCTTTGCTATTGCTATCAGTATATTCGTTAGCTTCAGCTTTGCTGCTATGTATGGTGTTGCTGTTGCTGCTCTTGGTATGCTCAGTACCATTGCCACTGGTTTGGCAATTGATGCTTATGGTCCCATCAGTGACAATGCTGGTGGTATTGCTGAAATGGCTGGAATGAGCCACCGCATCCGTGAAAGAACTGATGCTCTTGATGCCGCTGGAAACACCACTGCTGCTATTGGAAAGGGATTTGCCATTGGCTCTGCTGCCCTAGTCTCCTTGGCTCTCTTTGGTGCCTTTGTGAGCCGTGCAGGGATCCACACCGTAGATGTTTTGACCCCTAAAGTTATCATTGGGCTCCTTGTTGGTGCCATGCTTCCTTACTGGTTCTCTGCCATGACAATGAAGAGTGTGGGAAGTGCAGCTCTTAAGATGGTTGAAGAAGTTCGCAGGCAGTTCAACACCATCCCTGGACTTATGGAAGGAACCGCAAAACCAGACTACGCCACATGTGTCAAGATCTCCACCGATGCTTCCATCAAGGAAATGATACCTCCTGGTTGCCTTGTCATGCTCACACCTCTCATTGTTGGTTTCTTCTTTGGAGTTGAGACCCTCTCTGGTGTCCTCGCCGGATCTCTTGTATCCGGTGTTCAGATCGCCATATCAGCATCTAACACTGGTGGTGCCTGGGACAACGCCAAGAAATACATCGAGGCTGGTGTATCAGAGCACGCAAAGAGCCTTGGACCAAAGGGTTCAGAGCCACACAAGGCAGCTGTGATTGGAGACACAATTGGAGACCCATTGAAGGATACTTCAGGACCTTCATTGAACATCCTCATCAAGCTCATGGCTGTTGAGTCTCTTGTCTTTGCTCCCTTCTTCGCCACTCACGGTGGTATCCTTTTCAAGTACTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0001101 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005768 GO:0005773 GO:0005774 GO:0005794 GO:0005886 GO:0006810 GO:0006811 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0009414 GO:0009415 GO:0009507 GO:0009526 GO:0009536 GO:0009628 GO:0009651 GO:0009678 GO:0009705 GO:0009914 GO:0009926 GO:0009941 GO:0010008 GO:0010035 GO:0010248 GO:0010817 GO:0012505 GO:0015399 GO:0015405 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0022804 GO:0022857 GO:0031090 GO:0031410 GO:0031967 GO:0031975 GO:0031982 GO:0032501 GO:0032502 GO:0034220 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044433 GO:0044434 GO:0044435 GO:0044437 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0060918 GO:0065007 GO:0065008 GO:0071944 GO:0097708 GO:0098588 GO:0098805 GO:0099402 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00190 map00190

Pfam Domains

Protein Families

H_PPase

Protein Analysis

770

Amino Acids

80.82

Weight (kDa)

5.13

Isoelectric Point (pI)

22.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
H_PPase	PF03030	64 - 633	4.7e-197	Inorganic H+ pyrophosphatase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000897)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G15690 AT1G15690
fragaria_vesca	FvH4_1g02190 FvH4_1g02190 FvH4_1g02190 FvH4_6g07370 FvH4_6g07370 FvH4_6g07370 FvH4_6g07370 FvH4_6g07370 FvH4_6g29320 FvH4_6g29320 FvH4_6g29320 FvH4_6g29320 FvH4_6g29320 FvH4_6g29320
malus_domestica	MD02G1020700.v1.1 MD04G1194100.v1.1 MD12G1206600.v1.1 MD15G1163900.v1.1 MD17G1215700.v1.1
prunus_persica	Prupe.3G091900_v2.0.a1 Prupe.6G313800_v2.0.a1 Prupe.7G250800_v2.0.a1
pyrus_communis	pycom02g01810 pycom04g17150 pycom12g19440 pycom15g14710 pycom17g22030 pycom808g00300
rosa_chinensis	RchiOBHm_Chr2g0087281 RchiOBHm_Chr2g0134531 RchiOBHm_Chr3g0456971
rosa_laevigata	RLG00000015850 RLG00000019400 RLG00000025258
rosa_multiflora	Rmu_sc0004670.1_g000006 Rmu_sc0016008.1_g000005 Rmu_sc0017477.1_g000001 Rmu_sc0017478.1_g000001 Rmu_sc0017479.1_g000001 Rmu_sc0042014.1_g000001 Rmu_ssc0000438.1_g000050
rosa_roxburghii	Rroxscaffold_2G00110050 Rroxscaffold_2G00153750 Rroxscaffold_6G00422310
rosa_rugosa	Rorug01G0473600 Rorug02G0318400 Rorug03G0017900
rosa_samantha	Rh2AG027400 Rh2AG375000 Rh2AG375100 Rh2BG026600 Rh2BG376300 Rh2CG027700 Rh2CG354500 Rh2DG027300 Rh2DG393700 Rh3AG077800 Rh3BG079700 Rh3CG079600 Rh3DG081400
rosa_wichuraiana	Rw2G002150 Rw2G030190 Rw3G006670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	413
AccB1I	GGYRCC	4 cut(s)	7, 1682, 1757, 2075
AccII	CGCG	1 cut(s)	108
AciI	CCGC	4 cut(s)	59, 1573, 1605, 1878
AclWI	GGATC	8 cut(s)	34, 758, 815, 895, 910, 1699, 1712, 2032
AcoI	YGGCCR	1 cut(s)	733
AcuI	CTGAAG	3 cut(s)	933, 1417, 2193
AcyI	GRCGYC	1 cut(s)	8
AfaI	GTAC	8 cut(s)	48, 95, 290, 385, 439, 1283, 1486, 2306
AfiI	CCNNNNNNNGG	2 cut(s)	283, 2200
AflII	CTTAAG	1 cut(s)	1817
AflIII	ACRYGT	1 cut(s)	1898
AhlI	ACTAGT	1 cut(s)	1289
AjnI	CCWGG	3 cut(s)	1858, 1945, 2078
AjuI	GAANNNNNNNTTGG	2 cut(s)	1343, 1375
Alw21I	GWGCWC	2 cut(s)	30, 2124
Alw26I	GTCTC	5 cut(s)	1669, 1994, 2172, 2184, 2259
AlwI	GGATC	8 cut(s)	34, 758, 815, 895, 910, 1699, 1712, 2032
AlwNI	CAGNNNCTG	1 cut(s)	405
AoxI	GGCC	2 cut(s)	733, 1363
Asp700I	GAANNNNTTC	1 cut(s)	1833
AspLEI	GCGC	5 cut(s)	10, 134, 236, 779, 926
AspS9I	GGNCC	4 cut(s)	522, 1520, 2138, 2213
AsuHPI	GGTGA	5 cut(s)	73, 109, 188, 869, 881
AvaII	GGWCC	4 cut(s)	522, 1520, 2138, 2213
BaeI	ACNNNNGTAYC	2 cut(s)	2275, 2308
BamHI	GGATCC	1 cut(s)	1704
BanI	GGYRCC	4 cut(s)	7, 1682, 1757, 2075
BanII	GRGCYC	2 cut(s)	30, 1749
BarI	GAAGNNNNNNTAC	2 cut(s)	155, 187
BbsI	GAAGAC	3 cut(s)	132, 298, 708
Bbv12I	GWGCWC	2 cut(s)	30, 2124
BccI	CCATC	6 cut(s)	583, 1187, 1532, 1816, 1862, 1934
BceAI	ACGGC	2 cut(s)	720, 1680
BcgI	CGANNNNNNTGC	2 cut(s)	959, 993
BciT130I	CCWGG	3 cut(s)	1860, 1947, 2080
BciVI	GTATCC	4 cut(s)	164, 2044, 2197, 2303
BclI	TGATCA	1 cut(s)	1029
BcoDI	GTCTC	5 cut(s)	1669, 1994, 2172, 2184, 2259
BcuI	ACTAGT	1 cut(s)	1289
BfaI	CTAG	3 cut(s)	519, 1290, 1661
BfmI	CTRYAG	2 cut(s)	426, 1300
BfoI	RGCGCY	2 cut(s)	11, 780
BfrI	CTTAAG	1 cut(s)	1817
BfuAI	ACCTGC	1 cut(s)	413
BfuI	GTATCC	4 cut(s)	164, 2044, 2197, 2303
BglII	AGATCT	2 cut(s)	651, 1908
BmcAI	AGTACT	2 cut(s)	1283, 2306
Bme1390I	CCNGG	3 cut(s)	1860, 1947, 2080
Bme18I	GGWCC	4 cut(s)	522, 1520, 2138, 2213
BmgT120I	GGNCC	4 cut(s)	522, 1520, 2138, 2213
BmiI	GGNNCC	8 cut(s)	9, 1522, 1684, 1706, 1748, 1759, 1876, 2077
BmrFI	CCNGG	3 cut(s)	1860, 1947, 2080
BmrI	ACTGGG	1 cut(s)	679
BmsI	GCATC	8 cut(s)	143, 926, 1501, 1582, 1584, 1591, 1909, 2069
BmuI	ACTGGG	1 cut(s)	679
BpiI	GAAGAC	3 cut(s)	132, 298, 708
BplI	GAGNNNNNCTC	2 cut(s)	1991, 2023
BsaBI	GATNNNNATC	1 cut(s)	68
BsaHI	GRCGYC	1 cut(s)	8
BsaI	GGTCTC	2 cut(s)	1994, 2184
BsaJI	CCNNGG	8 cut(s)	127, 343, 487, 720, 1668, 1858, 2079, 2134
BsaWI	WCCGGW	3 cut(s)	22, 143, 2036
Bsc4I	CCNNNNNNNGG	2 cut(s)	283, 2200
Bse1I	ACTGG	7 cut(s)	674, 700, 1220, 1342, 1501, 1778, 2074
Bse3DI	GCAATG	5 cut(s)	441, 840, 873, 992, 1488
Bse8I	GATNNNNATC	1 cut(s)	68
BseBI	CCWGG	3 cut(s)	1860, 1947, 2080
BseDI	CCNNGG	8 cut(s)	127, 343, 487, 720, 1668, 1858, 2079, 2134
BseGI	GGATG	5 cut(s)	498, 823, 1575, 1854, 2226
BseJI	GATNNNNATC	1 cut(s)	68
BseLI	CCNNNNNNNGG	2 cut(s)	283, 2200
BseMI	GCAATG	5 cut(s)	441, 840, 873, 992, 1488
BseMII	CTCAG	3 cut(s)	228, 1269, 1495
BseNI	ACTGG	7 cut(s)	674, 700, 1220, 1342, 1501, 1778, 2074
BseYI	CCCAGC	1 cut(s)	832
BsgI	GTGCAG	3 cut(s)	1362, 1719, 1830
Bsh1236I	CGCG	1 cut(s)	108
BshFI	GGCC	2 cut(s)	735, 1365
BshNI	GGYRCC	4 cut(s)	7, 1682, 1757, 2075
BsiHKAI	GWGCWC	2 cut(s)	30, 2124
BsiSI	CCGG	4 cut(s)	23, 144, 2022, 2037
BslFI	GGGAC	2 cut(s)	1506, 2096
BslI	CCNNNNNNNGG	2 cut(s)	283, 2200
BsmAI	GTCTC	5 cut(s)	1669, 1994, 2172, 2184, 2259
BsmFI	GGGAC	2 cut(s)	1506, 2096
BsmI	GAATGC	1 cut(s)	569
BsnI	GGCC	2 cut(s)	735, 1365
Bso31I	GGTCTC	2 cut(s)	1994, 2184
Bsp1286I	GDGCHC	3 cut(s)	30, 1749, 2124
Bsp19I	CCATGG	1 cut(s)	720
BspACI	CCGC	4 cut(s)	59, 1573, 1605, 1878
BspANI	GGCC	2 cut(s)	735, 1365
BspCNI	CTCAG	3 cut(s)	229, 1270, 1494
BspFNI	CGCG	1 cut(s)	108
BspHI	TCATGA	1 cut(s)	309
BspLI	GGNNCC	8 cut(s)	9, 1522, 1684, 1706, 1748, 1759, 1876, 2077
BspMAI	CTGCAG	1 cut(s)	430
BspMI	ACCTGC	1 cut(s)	413
BspPI	GGATC	8 cut(s)	34, 758, 815, 895, 910, 1699, 1712, 2032
BspT107I	GGYRCC	4 cut(s)	7, 1682, 1757, 2075
BspTI	CTTAAG	1 cut(s)	1817
BspTNI	GGTCTC	2 cut(s)	1994, 2184
BsrDI	GCAATG	5 cut(s)	441, 840, 873, 992, 1488
BsrI	ACTGG	7 cut(s)	674, 700, 1220, 1342, 1501, 1778, 2074
BssECI	CCNNGG	8 cut(s)	127, 343, 487, 720, 1668, 1858, 2079, 2134
BssNI	GRCGYC	1 cut(s)	8
BssT1I	CCWWGG	4 cut(s)	487, 720, 1668, 2134
Bst2UI	CCWGG	3 cut(s)	1860, 1947, 2080
Bst4CI	ACNGT	5 cut(s)	176, 1120, 1132, 1714, 2288
Bst6I	CTCTTC	2 cut(s)	189, 1790
BstACI	GRCGYC	1 cut(s)	8
BstAFI	CTTAAG	1 cut(s)	1817
BstAPI	GCANNNNNTGC	1 cut(s)	1511
BstC8I	GCNNGC	5 cut(s)	12, 410, 414, 1841, 2124
BstDEI	CTNAG	5 cut(s)	228, 237, 759, 1278, 1481
BstDSI	CCRYGG	1 cut(s)	720
BstF5I	GGATG	5 cut(s)	498, 823, 1575, 1854, 2226
BstFNI	CGCG	1 cut(s)	108
BstH2I	RGCGCY	2 cut(s)	11, 780
BstHHI	GCGC	5 cut(s)	10, 134, 236, 779, 926
BstMAI	GTCTC	5 cut(s)	1669, 1994, 2172, 2184, 2259
BstNI	CCWGG	3 cut(s)	1860, 1947, 2080
BstNSI	RCATGY	1 cut(s)	1902
BstSCI	CCNGG	3 cut(s)	1858, 1945, 2078
BstSFI	CTRYAG	2 cut(s)	426, 1300
BstUI	CGCG	1 cut(s)	108
BstV2I	GAAGAC	3 cut(s)	132, 298, 708
BstX2I	RGATCY	7 cut(s)	39, 651, 750, 887, 1704, 1908, 2024
BstXI	CCANNNNNNTGG	1 cut(s)	1501
BstYI	RGATCY	7 cut(s)	39, 651, 750, 887, 1704, 1908, 2024
BsuI	GTATCC	4 cut(s)	164, 2044, 2197, 2303
BsuRI	GGCC	2 cut(s)	735, 1365
BtgI	CCRYGG	1 cut(s)	720
BtsCI	GGATG	5 cut(s)	498, 823, 1575, 1854, 2226
BtsI	GCAGTG	2 cut(s)	975, 1617
BtsIMutI	CAGTG	8 cut(s)	366, 975, 1047, 1275, 1494, 1534, 1617, 2067
BveI	ACCTGC	1 cut(s)	413
Cac8I	GCNNGC	5 cut(s)	12, 410, 414, 1841, 2124
CaiI	CAGNNNCTG	1 cut(s)	405
CciI	TCATGA	1 cut(s)	309
CfoI	GCGC	5 cut(s)	10, 134, 236, 779, 926
Cfr13I	GGNCC	4 cut(s)	522, 1520, 2138, 2213
Csp6I	GTAC	8 cut(s)	47, 94, 289, 384, 438, 1282, 1485, 2305
CspCI	CAANNNNNGTGG	2 cut(s)	1522, 1557
CviQI	GTAC	8 cut(s)	47, 94, 289, 384, 438, 1282, 1485, 2305
DdeI	CTNAG	5 cut(s)	228, 237, 759, 1278, 1481
DinI	GGCGCC	1 cut(s)	9
EaeI	YGGCCR	1 cut(s)	733
Eam1104I	CTCTTC	2 cut(s)	189, 1790
EarI	CTCTTC	2 cut(s)	189, 1790
Ecl136II	GAGCTC	1 cut(s)	28
Eco130I	CCWWGG	4 cut(s)	487, 720, 1668, 2134
Eco24I	GRGCYC	2 cut(s)	30, 1749
Eco31I	GGTCTC	2 cut(s)	1994, 2184
Eco47I	GGWCC	4 cut(s)	522, 1520, 2138, 2213
Eco53kI	GAGCTC	1 cut(s)	28
Eco57I	CTGAAG	3 cut(s)	933, 1417, 2193
EcoICRI	GAGCTC	1 cut(s)	28
EcoO109I	RGGNCCY	1 cut(s)	2213
EcoRII	CCWGG	3 cut(s)	1858, 1945, 2078
EcoT14I	CCWWGG	4 cut(s)	487, 720, 1668, 2134
EcoT38I	GRGCYC	2 cut(s)	30, 1749
EgeI	GGCGCC	1 cut(s)	9
EheI	GGCGCC	1 cut(s)	9
ErhI	CCWWGG	4 cut(s)	487, 720, 1668, 2134
FaqI	GGGAC	2 cut(s)	1506, 2096
FauNDI	CATATG	1 cut(s)	907
FbaI	TGATCA	1 cut(s)	1029
FokI	GGATG	5 cut(s)	505, 830, 1562, 1841, 2213
FriOI	GRGCYC	2 cut(s)	30, 1749
FspBI	CTAG	3 cut(s)	519, 1290, 1661
GlaI	GCGC	5 cut(s)	9, 133, 235, 778, 925
GsaI	CCCAGC	1 cut(s)	836
HaeII	RGCGCY	2 cut(s)	11, 780
HaeIII	GGCC	2 cut(s)	735, 1365
HapII	CCGG	4 cut(s)	23, 144, 2022, 2037
HhaI	GCGC	5 cut(s)	10, 134, 236, 779, 926
Hin1I	GRCGYC	1 cut(s)	8
Hin6I	GCGC	5 cut(s)	8, 132, 234, 777, 924
HinP1I	GCGC	5 cut(s)	8, 132, 234, 777, 924
HindIII	AAGCTT	1 cut(s)	1067
HinfI	GANTC	7 cut(s)	241, 360, 960, 1014, 1257, 1325, 2252
HpaII	CCGG	4 cut(s)	23, 144, 2022, 2037
HphI	GGTGA	5 cut(s)	73, 109, 188, 869, 881
Hpy188I	TCNGA	8 cut(s)	124, 246, 259, 892, 959, 2046, 2119, 2152
Hpy188III	TCNNGA	8 cut(s)	31, 310, 649, 812, 1210, 1598, 1906, 2211
HpyAV	CCTTC	8 cut(s)	194, 254, 608, 668, 1865, 2194, 2226, 2281
HpyCH4III	ACNGT	5 cut(s)	176, 1120, 1132, 1714, 2288
HpyCH4IV	ACGT	1 cut(s)	96
HpyF3I	CTNAG	5 cut(s)	228, 237, 759, 1278, 1481
HpySE526I	ACGT	1 cut(s)	96
Hsp92I	GRCGYC	1 cut(s)	8
HspAI	GCGC	5 cut(s)	8, 132, 234, 777, 924
KasI	GGCGCC	1 cut(s)	7
Ksp22I	TGATCA	1 cut(s)	1029
LmnI	GCTCC	4 cut(s)	25, 149, 1752, 2272
LweI	GCATC	8 cut(s)	143, 926, 1501, 1582, 1584, 1591, 1909, 2069
MaeI	CTAG	3 cut(s)	519, 1290, 1661
MaeII	ACGT	1 cut(s)	96
MaeIII	GTNAC	8 cut(s)	18, 463, 857, 869, 1273, 1292, 1376, 1529
MfeI	CAATTG	2 cut(s)	1506, 2184
MflI	RGATCY	7 cut(s)	39, 651, 750, 887, 1704, 1908, 2024
MhlI	GDGCHC	3 cut(s)	30, 1749, 2124
MluCI	AATT	3 cut(s)	795, 1506, 2184
Mly113I	GGCGCC	1 cut(s)	8
MlyI	GAGTC	2 cut(s)	1251, 2261
MmeI	TCCRAC	1 cut(s)	529
MroXI	GAANNNNTTC	1 cut(s)	1833
MseI	TTAA	3 cut(s)	207, 1065, 1818
MslI	CAYNNNNRTG	2 cut(s)	980, 1790
MspA1I	CMGCKG	3 cut(s)	836, 1607, 2168
MspCI	CTTAAG	1 cut(s)	1817
MspI	CCGG	4 cut(s)	23, 144, 2022, 2037
MspR9I	CCNGG	3 cut(s)	1860, 1947, 2080
MunI	CAATTG	2 cut(s)	1506, 2184
Mva1269I	GAATGC	1 cut(s)	569
MvaI	CCWGG	3 cut(s)	1860, 1947, 2080
MvnI	CGCG	1 cut(s)	108
NarI	GGCGCC	1 cut(s)	8
NcoI	CCATGG	1 cut(s)	720
NdeI	CATATG	1 cut(s)	907
NlaIV	GGNNCC	8 cut(s)	9, 1522, 1684, 1706, 1748, 1759, 1876, 2077
NmeAIII	GCCGAG	2 cut(s)	108, 324
NmuCI	GTSAC	4 cut(s)	857, 869, 1273, 1529
NspI	RCATGY	1 cut(s)	1902
PagI	TCATGA	1 cut(s)	309
PciI	ACATGT	1 cut(s)	1898
PctI	GAATGC	1 cut(s)	569
PdmI	GAANNNNTTC	1 cut(s)	1833
PfeI	GAWTC	5 cut(s)	241, 360, 960, 1014, 1325
PflFI	GACNNNGTC	1 cut(s)	785
PleI	GAGTC	2 cut(s)	1251, 2260
PluTI	GGCGCC	1 cut(s)	11
PpsI	GAGTC	2 cut(s)	1251, 2260
PpuMI	RGGWCCY	1 cut(s)	2213
PscI	ACATGT	1 cut(s)	1898
Psp124BI	GAGCTC	1 cut(s)	30
Psp5II	RGGWCCY	1 cut(s)	2213
Psp6I	CCWGG	3 cut(s)	1858, 1945, 2078
PspFI	CCCAGC	1 cut(s)	832
PspGI	CCWGG	3 cut(s)	1858, 1945, 2078
PspN4I	GGNNCC	8 cut(s)	9, 1522, 1684, 1706, 1748, 1759, 1876, 2077
PspPI	GGNCC	4 cut(s)	522, 1520, 2138, 2213
PspPPI	RGGWCCY	1 cut(s)	2213
PsrI	GAACNNNNNNTAC	2 cut(s)	2025, 2057
PstI	CTGCAG	1 cut(s)	430
PstNI	CAGNNNCTG	1 cut(s)	405
PsuI	RGATCY	7 cut(s)	39, 651, 750, 887, 1704, 1908, 2024
PsyI	GACNNNGTC	1 cut(s)	785
PvuII	CAGCTG	2 cut(s)	836, 2168
RsaI	GTAC	8 cut(s)	48, 95, 290, 385, 439, 1283, 1486, 2306
RsaNI	GTAC	8 cut(s)	47, 94, 289, 384, 438, 1282, 1485, 2305
RseI	CAYNNNNRTG	2 cut(s)	980, 1790
SacI	GAGCTC	1 cut(s)	30
SaqAI	TTAA	3 cut(s)	207, 1065, 1818
Sau96I	GGNCC	4 cut(s)	522, 1520, 2138, 2213
ScaI	AGTACT	2 cut(s)	1283, 2306
SchI	GAGTC	2 cut(s)	1251, 2261
ScrFI	CCNGG	3 cut(s)	1860, 1947, 2080
SduI	GDGCHC	3 cut(s)	30, 1749, 2124
SfaNI	GCATC	8 cut(s)	143, 926, 1501, 1582, 1584, 1591, 1909, 2069
SfcI	CTRYAG	2 cut(s)	426, 1300
SfoI	GGCGCC	1 cut(s)	9
SinI	GGWCC	4 cut(s)	522, 1520, 2138, 2213
SmiMI	CAYNNNNRTG	2 cut(s)	980, 1790
SmlI	CTYRAG	1 cut(s)	1817
SmoI	CTYRAG	1 cut(s)	1817
SpeI	ACTAGT	1 cut(s)	1289
Sse9I	AATT	3 cut(s)	795, 1506, 2184
SsiI	CCGC	4 cut(s)	59, 1573, 1605, 1878
SspDI	GGCGCC	1 cut(s)	7
SspI	AATATT	1 cut(s)	808
SspMI	CTAG	3 cut(s)	519, 1290, 1661
SstI	GAGCTC	1 cut(s)	30
StyD4I	CCNGG	3 cut(s)	1858, 1945, 2078
StyI	CCWWGG	4 cut(s)	487, 720, 1668, 2134
TaaI	ACNGT	5 cut(s)	176, 1120, 1132, 1714, 2288
TaiI	ACGT	1 cut(s)	99
TaqI	TCGA	3 cut(s)	189, 944, 2103
TasI	AATT	3 cut(s)	795, 1506, 2184
TatI	WGTACW	4 cut(s)	288, 383, 1281, 2304
TauI	GCSGC	1 cut(s)	1607
TfiI	GAWTC	5 cut(s)	241, 360, 960, 1014, 1325
Tru1I	TTAA	3 cut(s)	207, 1065, 1818
Tru9I	TTAA	3 cut(s)	207, 1065, 1818
TscAI	CASTG	8 cut(s)	373, 982, 1054, 1282, 1501, 1534, 1624, 2074
TseFI	GTSAC	4 cut(s)	857, 869, 1273, 1529
Tsp45I	GTSAC	4 cut(s)	857, 869, 1273, 1529
TspDTI	ATGAA	7 cut(s)	261, 298, 509, 550, 1317, 1808, 2208
TspGWI	ACGGA	5 cut(s)	50, 299, 675, 1375, 1568
TspRI	CASTG	8 cut(s)	373, 982, 1054, 1282, 1501, 1534, 1624, 2074
Tth111I	GACNNNGTC	1 cut(s)	785
Vha464I	CTTAAG	1 cut(s)	1817
VpaK11BI	GGWCC	4 cut(s)	522, 1520, 2138, 2213
XceI	RCATGY	1 cut(s)	1902
XmnI	GAANNNNTTC	1 cut(s)	1833
XspI	CTAG	3 cut(s)	519, 1290, 1661
ZrmI	AGTACT	2 cut(s)	1283, 2306

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.