Pyrophosphate-energized vacuolar membrane proton
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1176 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 209 |
| Acc16I | TGCGCA | 1 cut(s) | 387 |
| Acc36I | ACCTGC | 2 cut(s) | 404, 2026 |
| Acc65I | GGTACC | 1 cut(s) | 1865 |
| AccB1I | GGYRCC | 3 cut(s) | 1673, 1865, 1940 |
| AccII | CGCG | 5 cut(s) | 26, 100, 102, 128, 1689 |
| AciI | CCGC | 7 cut(s) | 5, 51, 131, 134, 1687, 1828, 1869 |
| AclWI | GGATC | 7 cut(s) | 34, 71, 457, 712, 886, 1648, 2146 |
| AcoI | YGGCCR | 1 cut(s) | 1494 |
| AcuI | CTGAAG | 4 cut(s) | 270, 825, 2091, 2210 |
| AdeI | CACNNNGTG | 1 cut(s) | 1940 |
| AfaI | GTAC | 5 cut(s) | 444, 615, 647, 1867, 2090 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 28, 60, 137, 181, 2152, 2191 |
| AgeI | ACCGGT | 1 cut(s) | 1328 |
| AgsI | TTSAA | 7 cut(s) | 166, 791, 1076, 1087, 1701, 1840, 2293 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1742 |
| AjnI | CCWGG | 3 cut(s) | 136, 774, 1849 |
| AluBI | AGCT | 7 cut(s) | 437, 827, 1082, 1096, 1143, 1428, 2230 |
| AluI | AGCT | 7 cut(s) | 437, 827, 1082, 1096, 1143, 1428, 2230 |
| Alw21I | GWGCWC | 1 cut(s) | 1478 |
| Alw26I | GTCTC | 2 cut(s) | 1859, 1985 |
| AlwI | GGATC | 7 cut(s) | 34, 71, 457, 712, 886, 1648, 2146 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1457 |
| ApaI | GGGCCC | 2 cut(s) | 144, 1515 |
| AsiGI | ACCGGT | 1 cut(s) | 1328 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 161 |
| Asp718I | GGTACC | 1 cut(s) | 1865 |
| AspLEI | GCGC | 5 cut(s) | 102, 130, 227, 388, 1691 |
| AsuC2I | CCSGG | 1 cut(s) | 1938 |
| AsuHPI | GGTGA | 5 cut(s) | 265, 665, 860, 958, 2180 |
| AvaII | GGWCC | 4 cut(s) | 393, 1326, 2121, 2182 |
| BaeGI | GKGCMC | 3 cut(s) | 144, 1515, 1945 |
| BalI | TGGCCA | 1 cut(s) | 1496 |
| BanI | GGYRCC | 3 cut(s) | 1673, 1865, 1940 |
| BanII | GRGCYC | 2 cut(s) | 144, 1515 |
| BbsI | GAAGAC | 1 cut(s) | 289 |
| Bbv12I | GWGCWC | 1 cut(s) | 1478 |
| BccI | CCATC | 5 cut(s) | 868, 1487, 1643, 1925, 2215 |
| BceAI | ACGGC | 3 cut(s) | 38, 175, 1141 |
| BciT130I | CCWGG | 3 cut(s) | 138, 776, 1851 |
| BciVI | GTATCC | 2 cut(s) | 990, 1361 |
| BcnI | CCSGG | 1 cut(s) | 1938 |
| BcoDI | GTCTC | 2 cut(s) | 1859, 1985 |
| BfaI | CTAG | 3 cut(s) | 510, 923, 1281 |
| BfmI | CTRYAG | 3 cut(s) | 432, 1321, 1485 |
| BfuAI | ACCTGC | 2 cut(s) | 404, 2026 |
| BfuI | GTATCC | 2 cut(s) | 990, 1361 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 139 |
| BglII | AGATCT | 2 cut(s) | 1899, 2295 |
| BlpI | GCTNAGC | 2 cut(s) | 1472, 1872 |
| Bme1390I | CCNGG | 4 cut(s) | 138, 776, 1851, 1938 |
| Bme18I | GGWCC | 4 cut(s) | 393, 1326, 2121, 2182 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1742 |
| BmiI | GGNNCC | 8 cut(s) | 142, 1513, 1675, 1867, 1942, 2123, 2183, 2184 |
| BmrFI | CCNGG | 4 cut(s) | 138, 776, 1851, 1938 |
| BmrI | ACTGGG | 1 cut(s) | 670 |
| BmsI | GCATC | 8 cut(s) | 373, 1014, 1458, 1492, 1573, 1582, 1900, 1922 |
| BmuI | ACTGGG | 1 cut(s) | 670 |
| BpiI | GAAGAC | 1 cut(s) | 289 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 953, 985 |
| BpmI | CTGGAG | 1 cut(s) | 1551 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1472, 1872 |
| BpuMI | CCSGG | 1 cut(s) | 1938 |
| BsaBI | GATNNNNATC | 2 cut(s) | 38, 1372 |
| BsaI | GGTCTC | 2 cut(s) | 1859, 1985 |
| BsaJI | CCNNGG | 5 cut(s) | 137, 334, 711, 750, 2125 |
| BsaWI | WCCGGW | 2 cut(s) | 1328, 2027 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 28, 60, 137, 181, 2152, 2191 |
| Bse118I | RCCGGY | 2 cut(s) | 1328, 1598 |
| Bse1I | ACTGG | 5 cut(s) | 82, 665, 691, 1211, 1769 |
| Bse3DI | GCAATG | 7 cut(s) | 864, 1291, 1398, 1443, 1446, 1536, 1758 |
| Bse8I | GATNNNNATC | 2 cut(s) | 38, 1372 |
| BseBI | CCWGG | 3 cut(s) | 138, 776, 1851 |
| BseDI | CCNNGG | 5 cut(s) | 137, 334, 711, 750, 2125 |
| BseGI | GGATG | 8 cut(s) | 260, 489, 879, 1005, 1160, 1473, 1913, 2217 |
| BseJI | GATNNNNATC | 2 cut(s) | 38, 1372 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 28, 60, 137, 181, 2152, 2191 |
| BseMI | GCAATG | 7 cut(s) | 864, 1291, 1398, 1443, 1446, 1536, 1758 |
| BseMII | CTCAG | 3 cut(s) | 219, 1260, 1463 |
| BseNI | ACTGG | 5 cut(s) | 82, 665, 691, 1211, 1769 |
| BseRI | GAGGAG | 3 cut(s) | 197, 200, 977 |
| BseSI | GKGCMC | 3 cut(s) | 144, 1515, 1945 |
| BseYI | CCCAGC | 1 cut(s) | 869 |
| BsgI | GTGCAG | 5 cut(s) | 358, 594, 1443, 1821, 2054 |
| Bsh1236I | CGCG | 5 cut(s) | 26, 100, 102, 128, 1689 |
| BshNI | GGYRCC | 3 cut(s) | 1673, 1865, 1940 |
| BshTI | ACCGGT | 1 cut(s) | 1328 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1478 |
| BsiSI | CCGG | 4 cut(s) | 1329, 1599, 1937, 2028 |
| BslFI | GGGAC | 4 cut(s) | 875, 2087, 2195, 2230 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 28, 60, 137, 181, 2152, 2191 |
| BsmAI | GTCTC | 2 cut(s) | 1859, 1985 |
| BsmFI | GGGAC | 4 cut(s) | 875, 2087, 2195, 2230 |
| BsmI | GAATGC | 1 cut(s) | 511 |
| Bso31I | GGTCTC | 2 cut(s) | 1859, 1985 |
| Bsp120I | GGGCCC | 2 cut(s) | 140, 1511 |
| Bsp1286I | GDGCHC | 4 cut(s) | 144, 1478, 1515, 1945 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1472, 1872 |
| Bsp19I | CCATGG | 1 cut(s) | 711 |
| Bsp68I | TCGCGA | 1 cut(s) | 26 |
| BspACI | CCGC | 7 cut(s) | 5, 51, 131, 134, 1687, 1828, 1869 |
| BspCNI | CTCAG | 3 cut(s) | 220, 1261, 1464 |
| BspFNI | CGCG | 5 cut(s) | 26, 100, 102, 128, 1689 |
| BspHI | TCATGA | 1 cut(s) | 1116 |
| BspLI | GGNNCC | 8 cut(s) | 142, 1513, 1675, 1867, 1942, 2123, 2183, 2184 |
| BspMAI | CTGCAG | 1 cut(s) | 1325 |
| BspMI | ACCTGC | 2 cut(s) | 404, 2026 |
| BspPI | GGATC | 7 cut(s) | 34, 71, 457, 712, 886, 1648, 2146 |
| BspT107I | GGYRCC | 3 cut(s) | 1673, 1865, 1940 |
| BspTNI | GGTCTC | 2 cut(s) | 1859, 1985 |
| BsrDI | GCAATG | 7 cut(s) | 864, 1291, 1398, 1443, 1446, 1536, 1758 |
| BsrFI | RCCGGY | 2 cut(s) | 1328, 1598 |
| BsrI | ACTGG | 5 cut(s) | 82, 665, 691, 1211, 1769 |
| BssAI | RCCGGY | 2 cut(s) | 1328, 1598 |
| BssECI | CCNNGG | 5 cut(s) | 137, 334, 711, 750, 2125 |
| BssT1I | CCWWGG | 4 cut(s) | 334, 711, 750, 2125 |
| Bst2UI | CCWGG | 3 cut(s) | 138, 776, 1851 |
| Bst4CI | ACNGT | 6 cut(s) | 149, 433, 605, 1111, 1123, 1705 |
| Bst6I | CTCTTC | 3 cut(s) | 335, 721, 1781 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1457, 2048 |
| BstC8I | GCNNGC | 7 cut(s) | 401, 405, 1359, 1552, 1600, 1832, 2115 |
| BstDEI | CTNAG | 6 cut(s) | 219, 228, 1269, 1472, 1872, 2082 |
| BstDSI | CCRYGG | 1 cut(s) | 711 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 179 |
| BstF5I | GGATG | 8 cut(s) | 260, 489, 879, 1005, 1160, 1473, 1913, 2217 |
| BstFNI | CGCG | 5 cut(s) | 26, 100, 102, 128, 1689 |
| BstHHI | GCGC | 5 cut(s) | 102, 130, 227, 388, 1691 |
| BstMAI | GTCTC | 2 cut(s) | 1859, 1985 |
| BstNI | CCWGG | 3 cut(s) | 138, 776, 1851 |
| BstNSI | RCATGY | 1 cut(s) | 2117 |
| BstSCI | CCNGG | 4 cut(s) | 136, 774, 1849, 1936 |
| BstSFI | CTRYAG | 3 cut(s) | 432, 1321, 1485 |
| BstSLI | GKGCMC | 3 cut(s) | 144, 1515, 1945 |
| BstUI | CGCG | 5 cut(s) | 26, 100, 102, 128, 1689 |
| BstV2I | GAAGAC | 1 cut(s) | 289 |
| BstX2I | RGATCY | 5 cut(s) | 878, 1640, 1899, 2138, 2295 |
| BstYI | RGATCY | 5 cut(s) | 878, 1640, 1899, 2138, 2295 |
| BsuI | GTATCC | 2 cut(s) | 990, 1361 |
| BtgI | CCRYGG | 1 cut(s) | 711 |
| BtgZI | GCGATG | 1 cut(s) | 1465 |
| BtsCI | GGATG | 8 cut(s) | 260, 489, 879, 1005, 1160, 1473, 1913, 2217 |
| BtsI | GCAGTG | 4 cut(s) | 1458, 1608, 2166, 2244 |
| BtuMI | TCGCGA | 1 cut(s) | 26 |
| BveI | ACCTGC | 2 cut(s) | 404, 2026 |
| Cac8I | GCNNGC | 7 cut(s) | 401, 405, 1359, 1552, 1600, 1832, 2115 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1457 |
| CciI | TCATGA | 1 cut(s) | 1116 |
| CfoI | GCGC | 5 cut(s) | 102, 130, 227, 388, 1691 |
| Cfr10I | RCCGGY | 2 cut(s) | 1328, 1598 |
| CseI | GACGC | 1 cut(s) | 110 |
| CsiI | ACCWGGT | 1 cut(s) | 774 |
| Csp6I | GTAC | 5 cut(s) | 443, 614, 646, 1866, 2089 |
| CspAI | ACCGGT | 1 cut(s) | 1328 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2044, 2079 |
| CviQI | GTAC | 5 cut(s) | 443, 614, 646, 1866, 2089 |
| DdeI | CTNAG | 6 cut(s) | 219, 228, 1269, 1472, 1872, 2082 |
| DraIII | CACNNNGTG | 1 cut(s) | 1940 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 209 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1742 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 209 |
| EaeI | YGGCCR | 1 cut(s) | 1494 |
| Eam1104I | CTCTTC | 3 cut(s) | 335, 721, 1781 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1742 |
| EarI | CTCTTC | 3 cut(s) | 335, 721, 1781 |
| Eco130I | CCWWGG | 4 cut(s) | 334, 711, 750, 2125 |
| Eco147I | AGGCCT | 3 cut(s) | 195, 548, 669 |
| Eco24I | GRGCYC | 2 cut(s) | 144, 1515 |
| Eco31I | GGTCTC | 2 cut(s) | 1859, 1985 |
| Eco47I | GGWCC | 4 cut(s) | 393, 1326, 2121, 2182 |
| Eco57I | CTGAAG | 4 cut(s) | 270, 825, 2091, 2210 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 179 |
| EcoO109I | RGGNCCY | 3 cut(s) | 393, 2121, 2182 |
| EcoRII | CCWGG | 3 cut(s) | 136, 774, 1849 |
| EcoT14I | CCWWGG | 4 cut(s) | 334, 711, 750, 2125 |
| EcoT22I | ATGCAT | 2 cut(s) | 1291, 1915 |
| EcoT38I | GRGCYC | 2 cut(s) | 144, 1515 |
| ErhI | CCWWGG | 4 cut(s) | 334, 711, 750, 2125 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 146, 178 |
| FaqI | GGGAC | 4 cut(s) | 875, 2087, 2195, 2230 |
| FauNDI | CATATG | 1 cut(s) | 898 |
| FokI | GGATG | 8 cut(s) | 247, 496, 886, 992, 1147, 1480, 1900, 2204 |
| FriOI | GRGCYC | 2 cut(s) | 144, 1515 |
| FspBI | CTAG | 3 cut(s) | 510, 923, 1281 |
| FspI | TGCGCA | 1 cut(s) | 387 |
| GlaI | GCGC | 5 cut(s) | 101, 129, 226, 387, 1690 |
| GsaI | CCCAGC | 1 cut(s) | 873 |
| GsuI | CTGGAG | 1 cut(s) | 1551 |
| HapII | CCGG | 4 cut(s) | 1329, 1599, 1937, 2028 |
| HgaI | GACGC | 1 cut(s) | 110 |
| HhaI | GCGC | 5 cut(s) | 102, 130, 227, 388, 1691 |
| Hin6I | GCGC | 5 cut(s) | 100, 128, 225, 386, 1689 |
| HinP1I | GCGC | 5 cut(s) | 100, 128, 225, 386, 1689 |
| HinfI | GANTC | 7 cut(s) | 677, 905, 951, 1316, 1566, 1930, 2243 |
| HpaII | CCGG | 4 cut(s) | 1329, 1599, 1937, 2028 |
| HphI | GGTGA | 5 cut(s) | 265, 665, 860, 958, 2180 |
| Hpy166II | GTNNAC | 3 cut(s) | 646, 966, 2018 |
| Hpy188I | TCNGA | 7 cut(s) | 250, 883, 1191, 1640, 2110, 2143, 2303 |
| Hpy188III | TCNNGA | 8 cut(s) | 25, 61, 319, 803, 1117, 1589, 1897, 2293 |
| Hpy8I | GTNNAC | 3 cut(s) | 646, 966, 2018 |
| Hpy99I | CGWCG | 4 cut(s) | 31, 50, 215, 218 |
| HpyAV | CCTTC | 9 cut(s) | 100, 185, 245, 538, 659, 1174, 1618, 2185, 2272 |
| HpyCH4III | ACNGT | 6 cut(s) | 149, 433, 605, 1111, 1123, 1705 |
| HpyCH4IV | ACGT | 1 cut(s) | 210 |
| HpyF3I | CTNAG | 6 cut(s) | 219, 228, 1269, 1472, 1872, 2082 |
| HpySE526I | ACGT | 1 cut(s) | 210 |
| HspAI | GCGC | 5 cut(s) | 100, 128, 225, 386, 1689 |
| KflI | GGGWCCC | 1 cut(s) | 2182 |
| KpnI | GGTACC | 1 cut(s) | 1869 |
| KroI | GCCGGC | 1 cut(s) | 1598 |
| KroNI | GCCGGC | 1 cut(s) | 1600 |
| LmnI | GCTCC | 1 cut(s) | 2263 |
| LweI | GCATC | 8 cut(s) | 373, 1014, 1458, 1492, 1573, 1582, 1900, 1922 |
| MabI | ACCWGGT | 1 cut(s) | 774 |
| MaeI | CTAG | 3 cut(s) | 510, 923, 1281 |
| MaeII | ACGT | 1 cut(s) | 210 |
| MaeIII | GTNAC | 7 cut(s) | 109, 122, 149, 454, 1264, 1520, 2168 |
| MboII | GAAGA | 7 cut(s) | 289, 316, 322, 738, 818, 1798, 2290 |
| MfeI | CAATTG | 1 cut(s) | 1211 |
| MflI | RGATCY | 5 cut(s) | 878, 1640, 1899, 2138, 2295 |
| MhlI | GDGCHC | 4 cut(s) | 144, 1478, 1515, 1945 |
| MlsI | TGGCCA | 1 cut(s) | 1496 |
| MluNI | TGGCCA | 1 cut(s) | 1496 |
| MlyI | GAGTC | 2 cut(s) | 686, 2252 |
| MmeI | TCCRAC | 3 cut(s) | 1105, 1951, 2079 |
| Mox20I | TGGCCA | 1 cut(s) | 1496 |
| Mph1103I | ATGCAT | 2 cut(s) | 1291, 1915 |
| MroNI | GCCGGC | 1 cut(s) | 1598 |
| MroXI | GAANNNNTTC | 1 cut(s) | 161 |
| MscI | TGGCCA | 1 cut(s) | 1496 |
| MseI | TTAA | 3 cut(s) | 639, 1019, 1715 |
| MslI | CAYNNNNRTG | 4 cut(s) | 971, 1451, 1781, 2237 |
| Msp20I | TGGCCA | 1 cut(s) | 1496 |
| MspA1I | CMGCKG | 1 cut(s) | 827 |
| MspI | CCGG | 4 cut(s) | 1329, 1599, 1937, 2028 |
| MspR9I | CCNGG | 4 cut(s) | 138, 776, 1851, 1938 |
| MunI | CAATTG | 1 cut(s) | 1211 |
| Mva1269I | GAATGC | 1 cut(s) | 511 |
| MvaI | CCWGG | 3 cut(s) | 138, 776, 1851 |
| MvnI | CGCG | 5 cut(s) | 26, 100, 102, 128, 1689 |
| NaeI | GCCGGC | 1 cut(s) | 1600 |
| NciI | CCSGG | 1 cut(s) | 1938 |
| NcoI | CCATGG | 1 cut(s) | 711 |
| NdeI | CATATG | 1 cut(s) | 898 |
| NgoMIV | GCCGGC | 1 cut(s) | 1598 |
| NlaIV | GGNNCC | 8 cut(s) | 142, 1513, 1675, 1867, 1942, 2123, 2183, 2184 |
| NmuCI | GTSAC | 5 cut(s) | 109, 122, 1264, 1520, 2168 |
| NruI | TCGCGA | 1 cut(s) | 26 |
| NsbI | TGCGCA | 1 cut(s) | 387 |
| NsiI | ATGCAT | 2 cut(s) | 1291, 1915 |
| NspI | RCATGY | 1 cut(s) | 2117 |
| PaeI | GCATGC | 1 cut(s) | 2117 |
| PagI | TCATGA | 1 cut(s) | 1116 |
| PceI | AGGCCT | 3 cut(s) | 195, 548, 669 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 99, 165 |
| PctI | GAATGC | 1 cut(s) | 511 |
| PdiI | GCCGGC | 1 cut(s) | 1600 |
| PdmI | GAANNNNTTC | 1 cut(s) | 161 |
| PfeI | GAWTC | 5 cut(s) | 905, 951, 1316, 1566, 1930 |
| PinAI | ACCGGT | 1 cut(s) | 1328 |
| PleI | GAGTC | 2 cut(s) | 685, 2251 |
| PpsI | GAGTC | 2 cut(s) | 685, 2251 |
| PpuMI | RGGWCCY | 3 cut(s) | 393, 2121, 2182 |
| PsiI | TTATAA | 1 cut(s) | 1176 |
| Psp5II | RGGWCCY | 3 cut(s) | 393, 2121, 2182 |
| Psp6I | CCWGG | 3 cut(s) | 136, 774, 1849 |
| PspFI | CCCAGC | 1 cut(s) | 869 |
| PspGI | CCWGG | 3 cut(s) | 136, 774, 1849 |
| PspN4I | GGNNCC | 8 cut(s) | 142, 1513, 1675, 1867, 1942, 2123, 2183, 2184 |
| PspOMI | GGGCCC | 2 cut(s) | 140, 1511 |
| PspPPI | RGGWCCY | 3 cut(s) | 393, 2121, 2182 |
| PstI | CTGCAG | 1 cut(s) | 1325 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1457 |
| PsuI | RGATCY | 5 cut(s) | 878, 1640, 1899, 2138, 2295 |
| PvuII | CAGCTG | 1 cut(s) | 827 |
| RruI | TCGCGA | 1 cut(s) | 26 |
| RsaI | GTAC | 5 cut(s) | 444, 615, 647, 1867, 2090 |
| RsaNI | GTAC | 5 cut(s) | 443, 614, 646, 1866, 2089 |
| RseI | CAYNNNNRTG | 4 cut(s) | 971, 1451, 1781, 2237 |
| SaqAI | TTAA | 3 cut(s) | 639, 1019, 1715 |
| SbfI | CCTGCAGG | 1 cut(s) | 1325 |
| SchI | GAGTC | 2 cut(s) | 686, 2252 |
| ScrFI | CCNGG | 4 cut(s) | 138, 776, 1851, 1938 |
| SdaI | CCTGCAGG | 1 cut(s) | 1325 |
| SduI | GDGCHC | 4 cut(s) | 144, 1478, 1515, 1945 |
| SexAI | ACCWGGT | 1 cut(s) | 774 |
| SfaNI | GCATC | 8 cut(s) | 373, 1014, 1458, 1492, 1573, 1582, 1900, 1922 |
| SfcI | CTRYAG | 3 cut(s) | 432, 1321, 1485 |
| SinI | GGWCC | 4 cut(s) | 393, 1326, 2121, 2182 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 971, 1451, 1781, 2237 |
| SphI | GCATGC | 1 cut(s) | 2117 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 1325 |
| SseBI | AGGCCT | 3 cut(s) | 195, 548, 669 |
| SsiI | CCGC | 7 cut(s) | 5, 51, 131, 134, 1687, 1828, 1869 |
| SspI | AATATT | 1 cut(s) | 799 |
| SspMI | CTAG | 3 cut(s) | 510, 923, 1281 |
| StuI | AGGCCT | 3 cut(s) | 195, 548, 669 |
| StyD4I | CCNGG | 4 cut(s) | 136, 774, 1849, 1936 |
| StyI | CCWWGG | 4 cut(s) | 334, 711, 750, 2125 |
| TaaI | ACNGT | 6 cut(s) | 149, 433, 605, 1111, 1123, 1705 |
| TaiI | ACGT | 1 cut(s) | 213 |
| TaqI | TCGA | 2 cut(s) | 461, 675 |
| TatI | WGTACW | 2 cut(s) | 645, 2088 |
| TauI | GCSGC | 4 cut(s) | 53, 133, 136, 1689 |
| TfiI | GAWTC | 5 cut(s) | 905, 951, 1316, 1566, 1930 |
| Tru1I | TTAA | 3 cut(s) | 639, 1019, 1715 |
| Tru9I | TTAA | 3 cut(s) | 639, 1019, 1715 |
| TseFI | GTSAC | 5 cut(s) | 109, 122, 1264, 1520, 2168 |
| Tsp45I | GTSAC | 5 cut(s) | 109, 122, 1264, 1520, 2168 |
| TspDTI | ATGAA | 4 cut(s) | 79, 289, 500, 1799 |
| TspGWI | ACGGA | 2 cut(s) | 44, 1559 |
| VpaK11BI | GGWCC | 4 cut(s) | 393, 1326, 2121, 2182 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 179 |
| XceI | RCATGY | 1 cut(s) | 2117 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1789 |
| XmnI | GAANNNNTTC | 1 cut(s) | 161 |
| XspI | CTAG | 3 cut(s) | 510, 923, 1281 |
| Zsp2I | ATGCAT | 2 cut(s) | 1291, 1915 |