Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0000897

Physical Location & Seq

Genomic Coordinates Reverse (-)

51533346 .. 51537970

Gene Structure 4625 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000019400

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2304 bp

ATGGCGGTGCTGCTCTCGTACCTTGCCACGGAGATTGTGATCCCGGTGTGCGCCGTGGTAGGGATCTTGTTCTCGCTCGCGCAGTGGTTCTTGGTGTCGCGCGTGAGGGTCACGCCCGACCGCAACGCGCCGCCCGGGGGAACCAACACCAAGAAGAACGGCTTCAACGACTACCTCATTGAGGAGGAGGAAGGCGTCAACGACCAAACCGTCGTCGCTAAGTGCGCCGAGATTCAGAATGCTATCTCCGAAGGTGCAACATCCTTCCTATTCACTGAATATCAGTATGTCGGGGTCTTCATGGTTGTTTTTGCGGTCTTGATCTTCCTCTTCCTGGGGTCCGTGAAGGGCTTCAGCACACAGAGCCAGCCGTGCACTTATGATGTGACAAACACCTGCAAGCCAGCACTTGCTACTGCAGTCTTCAGCACTGTTGCTTTCTTACTTGGTGGTATCACCTCACTCCTCTCTGGTTTTCTTGGGATGAAAATCGCCACTTATGCCAATGCCAGGACAACATTGGAAGCAAGAAAAGGTGTGGGGAAGGCCTTTATCGTGGCCTTTAGGTCTGGTGCAGTCATGGGTTTTCTCCTTGCAGCCAATGGTCTTTTGGTCCTTTACATTACCATCAATCTCTTTCAGCTGTACTATGGTGATGACTGGGAAGGCCTTTTCGAGGCAATTACTGGCTATGGTCTTGGTGGATCAGCAATGGCTCTTTTTGGGAGAGTAGGTGGTGGTATCTATACCAAGGCTGCTGATGTTGGTGCCGACCTTGTTGGAAAAATTGAAAGAAACATTCCTGAAGATGACCCAAGAAACCCAGCTGTGATTGCTGACAATGTTGGTGATAATGTTGGGGATATTGCTGGTATGGGATCCGATCTTTTTGGCTCATATGCTGAATCATCTTGTGCTGCTCTTGTTGTTGCTTCCATTTCCTCATTTGGAATCAACCATGAGTTCACTGCTATGCTGTATCCCCTCCTCGTCAGTTCTATGGGCATTCTTGTTTGTTTAATCACAACCTTGTTTGCCACTGATTTCTTTGAGATCAAGGCTGTCAAGGACATTGAACCAGCTTTGAAAAAGCAGCTTATCATCTCCACTGTTCTTATGACTATTGGAATTGCAATTGTAAGCTGGGTTGCTCTGCCATCATCCTTCACAATTTACAATTTTGGAGTTCAGAAAGTTGTAAGGAACTGGCAATTGTTCTTGTGTGTATCCGTTGGTCTTTGGGCAGGACTTATCATTGGGTTTGTCACTGAGTATTATACTAGCAATGCATACAGCCCCGTGCAGGATGTTGCTGATTCCTGTAGGACTGGTGCTGCCACCAATGTTATCTTTGGGCTTGCTCTGGGATACAAATCAGTCATCATTCCAATTTTTGCCATCGCAGTCAGCATTTTTGTTAGTTTTAGTTTCGCTGCTATGTATGGCATTGCAGTGGCTGCTCTTGGGATGCTGAGCACCATTGCTACAGGGTTGGCAATTGATGCCTACGGGCCCATCAGTGACAATGCTGGAGGTATTGCTGAAATGGCTGGCATGAGCCATCGAATCCGTGAGAGAACTGATGCTCTTGATGCTGCTGGGAATACCACTGCTGCAATTGGAAAGGGATTTGCTATCGGATCTGCTGCTTTGGTGTCTTTGGCACTATTTGGTGCCTTTGTCAGTCGTGCAGCAATTTCAACAGTTGATGTCCTAACCCCAAAGGTCTTTATTGGATTGATCGTGGGTGCAATGCTTCCTTACTGGTTCTCTGCCATGACCATGAAGAGTGTGGGAAGTGCAGCTCTGAAAATGGTTGAGGAAGTTCGCAGGCAGTTCAATACCATCCCAGGACTCATGGAGGGTCTTGCCAAGCCCGACTATGCTACCTGTGTCAAGATCTCCACTGATGCATCCATCAAGGAGATGATTCCACCTGGTGCCCTTGTCATCCTTACACCTCTCATTGTCGGAACATTGTTTGGTGTGGAGACCCTCTCTGGTGTCCTGGCTGGTTCCCTTGTTTCTGGTGTCCAGGTAGCAATATCTGCCTCCAACACTGGTGGTGCATGGGACAATGCCAAGAAGTACATTGAGGCTGGTGCTTCGGAGCATGCAAGGACTCTTGGCCCAAAGGGGTCCGACCCACACAAGGCTGCAGTGATTGGTGACACCATTGGTGACCCACTGAAGGACACTTCAGGCCCATCACTCAACATCCTTATTAAGCTCATGGCTGTGGAGTCCCTTGTGTTTGCTCCCTTCTTTGCCACTCACGGTGGCCTGCTCTTCAAGATCTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0001101 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005768 GO:0005773 GO:0005774 GO:0005794 GO:0005886 GO:0006810 GO:0006811 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0009414 GO:0009415 GO:0009507 GO:0009526 GO:0009536 GO:0009628 GO:0009651 GO:0009678 GO:0009705 GO:0009914 GO:0009926 GO:0009941 GO:0010008 GO:0010035 GO:0010248 GO:0010817 GO:0012505 GO:0015399 GO:0015405 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0022804 GO:0022857 GO:0031090 GO:0031410 GO:0031967 GO:0031975 GO:0031982 GO:0032501 GO:0032502 GO:0034220 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044433 GO:0044434 GO:0044435 GO:0044437 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0060918 GO:0065007 GO:0065008 GO:0071944 GO:0097708 GO:0098588 GO:0098805 GO:0099402 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00190 map00190

Pfam Domains

Protein Families

H_PPase

Protein Analysis

768

Amino Acids

80.55

Weight (kDa)

5.24

Isoelectric Point (pI)

22.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
H_PPase	PF03030	70 - 752	2.4e-254	Inorganic H+ pyrophosphatase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000897)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G15690 AT1G15690
fragaria_vesca	FvH4_1g02190 FvH4_1g02190 FvH4_1g02190 FvH4_6g07370 FvH4_6g07370 FvH4_6g07370 FvH4_6g07370 FvH4_6g07370 FvH4_6g29320 FvH4_6g29320 FvH4_6g29320 FvH4_6g29320 FvH4_6g29320 FvH4_6g29320
malus_domestica	MD02G1020700.v1.1 MD04G1194100.v1.1 MD12G1206600.v1.1 MD15G1163900.v1.1 MD17G1215700.v1.1
prunus_persica	Prupe.3G091900_v2.0.a1 Prupe.6G313800_v2.0.a1 Prupe.7G250800_v2.0.a1
pyrus_communis	pycom02g01810 pycom04g17150 pycom12g19440 pycom15g14710 pycom17g22030 pycom808g00300
rosa_chinensis	RchiOBHm_Chr2g0087281 RchiOBHm_Chr2g0134531 RchiOBHm_Chr3g0456971
rosa_laevigata	RLG00000015850 RLG00000019400 RLG00000025258
rosa_multiflora	Rmu_sc0004670.1_g000006 Rmu_sc0016008.1_g000005 Rmu_sc0017477.1_g000001 Rmu_sc0017478.1_g000001 Rmu_sc0017479.1_g000001 Rmu_sc0042014.1_g000001 Rmu_ssc0000438.1_g000050
rosa_roxburghii	Rroxscaffold_2G00110050 Rroxscaffold_2G00153750 Rroxscaffold_6G00422310
rosa_rugosa	Rorug01G0473600 Rorug02G0318400 Rorug03G0017900
rosa_samantha	Rh2AG027400 Rh2AG375000 Rh2AG375100 Rh2BG026600 Rh2BG376300 Rh2CG027700 Rh2CG354500 Rh2DG027300 Rh2DG393700 Rh3AG077800 Rh3BG079700 Rh3CG079600 Rh3DG081400
rosa_wichuraiana	Rw2G002150 Rw2G030190 Rw3G006670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	404
AasI	GACNNNNNNGTC	1 cut(s)	209
Acc36I	ACCTGC	1 cut(s)	404
AccB1I	GGYRCC	3 cut(s)	767, 1673, 1940
AccII	CGCG	4 cut(s)	80, 100, 102, 128
AciI	CCGC	4 cut(s)	5, 121, 131, 314
AclWI	GGATC	6 cut(s)	34, 71, 712, 873, 886, 1648
AcuI	CTGAAG	5 cut(s)	337, 409, 825, 2184, 2210
AcyI	GRCGYC	1 cut(s)	195
AdeI	CACNNNGTG	1 cut(s)	1940
AfaI	GTAC	3 cut(s)	20, 647, 2090
AgsI	TTSAA	7 cut(s)	166, 791, 1076, 1087, 1701, 1840, 2293
AjnI	CCWGG	6 cut(s)	333, 509, 1849, 1936, 2007, 2034
AluBI	AGCT	7 cut(s)	643, 827, 1082, 1096, 1143, 1805, 2230
AluI	AGCT	7 cut(s)	643, 827, 1082, 1096, 1143, 1805, 2230
Alw21I	GWGCWC	2 cut(s)	377, 1478
Alw26I	GTCTC	1 cut(s)	1985
Alw44I	GTGCAC	1 cut(s)	373
AlwI	GGATC	6 cut(s)	34, 71, 712, 873, 886, 1648
AlwNI	CAGNNNCTG	1 cut(s)	1457
Ama87I	CYCGRG	1 cut(s)	134
AoxI	GGCC	7 cut(s)	546, 558, 667, 1511, 2128, 2203, 2281
ApaI	GGGCCC	1 cut(s)	1515
ApaLI	GTGCAC	1 cut(s)	373
Asp700I	GAANNNNTTC	2 cut(s)	161, 350
AspLEI	GCGC	5 cut(s)	53, 82, 102, 130, 227
AspS9I	GGNCC	7 cut(s)	339, 613, 1511, 1512, 2129, 2139, 2204
AsuC2I	CCSGG	3 cut(s)	44, 135, 136
AsuHPI	GGTGA	5 cut(s)	448, 665, 860, 2180, 2192
AvaI	CYCGRG	1 cut(s)	134
AvaII	GGWCC	3 cut(s)	339, 613, 2139
BaeGI	GKGCMC	3 cut(s)	377, 1515, 1945
BamHI	GGATCC	1 cut(s)	878
BanI	GGYRCC	3 cut(s)	767, 1673, 1940
BanII	GRGCYC	1 cut(s)	1515
BbsI	GAAGAC	2 cut(s)	289, 415
Bbv12I	GWGCWC	2 cut(s)	377, 1478
BccI	CCATC	8 cut(s)	635, 1165, 1406, 1523, 1569, 1853, 1925, 2215
BceAI	ACGGC	3 cut(s)	38, 175, 355
BciT130I	CCWGG	6 cut(s)	335, 511, 1851, 1938, 2009, 2036
BciVI	GTATCC	3 cut(s)	990, 1237, 1361
BcnI	CCSGG	3 cut(s)	44, 135, 136
BcoDI	GTCTC	1 cut(s)	1985
BfaI	CTAG	1 cut(s)	1281
BfmI	CTRYAG	4 cut(s)	417, 1321, 1485, 2157
BfuAI	ACCTGC	1 cut(s)	404
BfuI	GTATCC	3 cut(s)	990, 1237, 1361
BglII	AGATCT	2 cut(s)	1899, 2295
BlpI	GCTNAGC	1 cut(s)	1472
Bme1390I	CCNGG	9 cut(s)	44, 135, 136, 335, 511, 1851, 1938, 2009, 2036
Bme18I	GGWCC	3 cut(s)	339, 613, 2139
BmeT110I	CYCGRG	1 cut(s)	134
BmgT120I	GGNCC	7 cut(s)	339, 613, 1511, 1512, 2129, 2139, 2204
BmiI	GGNNCC	9 cut(s)	142, 340, 769, 880, 1513, 1675, 1942, 2017, 2140
BmrFI	CCNGG	9 cut(s)	44, 135, 136, 335, 511, 1851, 1938, 2009, 2036
BmrI	ACTGGG	1 cut(s)	670
BmsI	GCATC	6 cut(s)	1458, 1492, 1573, 1582, 1900, 1922
BmuI	ACTGGG	1 cut(s)	670
BpiI	GAAGAC	2 cut(s)	289, 415
BplI	GAGNNNNNCTC	2 cut(s)	1982, 2014
BpmI	CTGGAG	1 cut(s)	1551
Bpu1102I	GCTNAGC	1 cut(s)	1472
BpuMI	CCSGG	3 cut(s)	44, 135, 136
BsaBI	GATNNNNATC	3 cut(s)	38, 488, 1372
BsaHI	GRCGYC	1 cut(s)	195
BsaI	GGTCTC	1 cut(s)	1985
BsaJI	CCNNGG	7 cut(s)	27, 54, 134, 135, 334, 750, 1849
BsaXI	ACNNNNNCTCC	2 cut(s)	718, 748
Bse1I	ACTGG	6 cut(s)	665, 691, 1211, 1333, 1769, 2065
Bse3DI	GCAATG	5 cut(s)	717, 1291, 1446, 1479, 1758
Bse8I	GATNNNNATC	3 cut(s)	38, 488, 1372
BseBI	CCWGG	6 cut(s)	335, 511, 1851, 1938, 2009, 2036
BseDI	CCNNGG	7 cut(s)	27, 54, 134, 135, 334, 750, 1849
BseGI	GGATG	9 cut(s)	260, 489, 1160, 1312, 1473, 1845, 1913, 1950, 2217
BseJI	GATNNNNATC	3 cut(s)	38, 488, 1372
BseMI	GCAATG	5 cut(s)	717, 1291, 1446, 1479, 1758
BseMII	CTCAG	2 cut(s)	1260, 1463
BseNI	ACTGG	6 cut(s)	665, 691, 1211, 1333, 1769, 2065
BseRI	GAGGAG	4 cut(s)	197, 200, 455, 977
BseSI	GKGCMC	3 cut(s)	377, 1515, 1945
BseYI	CCCAGC	3 cut(s)	823, 1143, 1598
BsgI	GTGCAG	4 cut(s)	594, 1322, 1710, 1821
Bsh1236I	CGCG	4 cut(s)	80, 100, 102, 128
Bsh1285I	CGRYCG	1 cut(s)	121
BshFI	GGCC	7 cut(s)	548, 560, 669, 1513, 2130, 2205, 2283
BshNI	GGYRCC	3 cut(s)	767, 1673, 1940
BsiEI	CGRYCG	1 cut(s)	121
BsiHKAI	GWGCWC	2 cut(s)	377, 1478
BsiHKCI	CYCGRG	1 cut(s)	134
BsiSI	CCGG	2 cut(s)	44, 135
BslFI	GGGAC	2 cut(s)	2087, 2230
BsmAI	GTCTC	1 cut(s)	1985
BsmFI	GGGAC	2 cut(s)	2087, 2230
BsmI	GAATGC	2 cut(s)	244, 1005
BsnI	GGCC	7 cut(s)	548, 560, 669, 1513, 2130, 2205, 2283
Bso31I	GGTCTC	1 cut(s)	1985
BsoBI	CYCGRG	1 cut(s)	134
Bsp120I	GGGCCC	1 cut(s)	1511
Bsp1286I	GDGCHC	4 cut(s)	377, 1478, 1515, 1945
Bsp1720I	GCTNAGC	1 cut(s)	1472
BspACI	CCGC	4 cut(s)	5, 121, 131, 314
BspANI	GGCC	7 cut(s)	548, 560, 669, 1513, 2130, 2205, 2283
BspCNI	CTCAG	2 cut(s)	1261, 1464
BspFNI	CGCG	4 cut(s)	80, 100, 102, 128
BspLI	GGNNCC	9 cut(s)	142, 340, 769, 880, 1513, 1675, 1942, 2017, 2140
BspMAI	CTGCAG	2 cut(s)	421, 2161
BspMI	ACCTGC	1 cut(s)	404
BspPI	GGATC	6 cut(s)	34, 71, 712, 873, 886, 1648
BspQI	GCTCTTC	1 cut(s)	2294
BspT107I	GGYRCC	3 cut(s)	767, 1673, 1940
BspTNI	GGTCTC	1 cut(s)	1985
BsrDI	GCAATG	5 cut(s)	717, 1291, 1446, 1479, 1758
BsrI	ACTGG	6 cut(s)	665, 691, 1211, 1333, 1769, 2065
BssECI	CCNNGG	7 cut(s)	27, 54, 134, 135, 334, 750, 1849
BssNI	GRCGYC	1 cut(s)	195
BssT1I	CCWWGG	1 cut(s)	750
Bst2UI	CCWGG	6 cut(s)	335, 511, 1851, 1938, 2009, 2036
Bst4CI	ACNGT	5 cut(s)	211, 433, 1111, 1705, 2279
Bst6I	CTCTTC	3 cut(s)	335, 1781, 2294
BstACI	GRCGYC	1 cut(s)	195
BstAPI	GCANNNNNTGC	3 cut(s)	1457, 1502, 2048
BstC8I	GCNNGC	9 cut(s)	78, 368, 401, 405, 1359, 1552, 1832, 2115, 2285
BstDEI	CTNAG	3 cut(s)	219, 1269, 1472
BstDSI	CCRYGG	2 cut(s)	27, 54
BstEII	GGTNACC	1 cut(s)	2180
BstENI	CCTNNNNNAGG	2 cut(s)	179, 674
BstF5I	GGATG	9 cut(s)	260, 489, 1160, 1312, 1473, 1845, 1913, 1950, 2217
BstFNI	CGCG	4 cut(s)	80, 100, 102, 128
BstHHI	GCGC	5 cut(s)	53, 82, 102, 130, 227
BstMAI	GTCTC	1 cut(s)	1985
BstMCI	CGRYCG	1 cut(s)	121
BstNI	CCWGG	6 cut(s)	335, 511, 1851, 1938, 2009, 2036
BstNSI	RCATGY	1 cut(s)	2117
BstPI	GGTNACC	1 cut(s)	2180
BstSCI	CCNGG	9 cut(s)	42, 133, 134, 333, 509, 1849, 1936, 2007, 2034
BstSFI	CTRYAG	4 cut(s)	417, 1321, 1485, 2157
BstSLI	GKGCMC	3 cut(s)	377, 1515, 1945
BstUI	CGCG	4 cut(s)	80, 100, 102, 128
BstV2I	GAAGAC	2 cut(s)	289, 415
BstX2I	RGATCY	5 cut(s)	63, 878, 1640, 1899, 2295
BstYI	RGATCY	5 cut(s)	63, 878, 1640, 1899, 2295
BsuI	GTATCC	3 cut(s)	990, 1237, 1361
BsuRI	GGCC	7 cut(s)	548, 560, 669, 1513, 2130, 2205, 2283
BtgI	CCRYGG	2 cut(s)	27, 54
BtgZI	GCGATG	1 cut(s)	1384
BtsCI	GGATG	9 cut(s)	260, 489, 1160, 1312, 1473, 1845, 1913, 1950, 2217
BtsI	GCAGTG	5 cut(s)	89, 966, 1458, 1608, 2166
BveI	ACCTGC	1 cut(s)	404
Cac8I	GCNNGC	9 cut(s)	78, 368, 401, 405, 1359, 1552, 1832, 2115, 2285
CaiI	CAGNNNCTG	1 cut(s)	1457
CfoI	GCGC	5 cut(s)	53, 82, 102, 130, 227
Cfr13I	GGNCC	7 cut(s)	339, 613, 1511, 1512, 2129, 2139, 2204
Cfr9I	CCCGGG	1 cut(s)	134
CseI	GACGC	1 cut(s)	184
CsiI	ACCWGGT	1 cut(s)	1936
Csp6I	GTAC	3 cut(s)	19, 646, 2089
CspCI	CAANNNNNGTGG	4 cut(s)	16, 51, 2044, 2079
CviQI	GTAC	3 cut(s)	19, 646, 2089
DdeI	CTNAG	3 cut(s)	219, 1269, 1472
DraIII	CACNNNGTG	1 cut(s)	1940
DrdI	GACNNNNNNGTC	1 cut(s)	209
DseDI	GACNNNNNNGTC	1 cut(s)	209
Eam1104I	CTCTTC	3 cut(s)	335, 1781, 2294
EarI	CTCTTC	3 cut(s)	335, 1781, 2294
Eco130I	CCWWGG	1 cut(s)	750
Eco147I	AGGCCT	2 cut(s)	548, 669
Eco24I	GRGCYC	1 cut(s)	1515
Eco31I	GGTCTC	1 cut(s)	1985
Eco47I	GGWCC	3 cut(s)	339, 613, 2139
Eco57I	CTGAAG	5 cut(s)	337, 409, 825, 2184, 2210
Eco88I	CYCGRG	1 cut(s)	134
Eco91I	GGTNACC	1 cut(s)	2180
EcoNI	CCTNNNNNAGG	2 cut(s)	179, 674
EcoO65I	GGTNACC	1 cut(s)	2180
EcoRII	CCWGG	6 cut(s)	333, 509, 1849, 1936, 2007, 2034
EcoT14I	CCWWGG	1 cut(s)	750
EcoT22I	ATGCAT	2 cut(s)	1291, 1915
EcoT38I	GRGCYC	1 cut(s)	1515
ErhI	CCWWGG	1 cut(s)	750
FalI	AAGNNNNNCTT	2 cut(s)	146, 178
FaqI	GGGAC	2 cut(s)	2087, 2230
FauNDI	CATATG	1 cut(s)	898
FokI	GGATG	9 cut(s)	247, 496, 1147, 1319, 1480, 1832, 1900, 1937, 2204
FriOI	GRGCYC	1 cut(s)	1515
FspBI	CTAG	1 cut(s)	1281
GlaI	GCGC	5 cut(s)	52, 81, 101, 129, 226
GsaI	CCCAGC	3 cut(s)	827, 1147, 1602
GsuI	CTGGAG	1 cut(s)	1551
HaeIII	GGCC	7 cut(s)	548, 560, 669, 1513, 2130, 2205, 2283
HapII	CCGG	2 cut(s)	44, 135
HgaI	GACGC	1 cut(s)	184
HhaI	GCGC	5 cut(s)	53, 82, 102, 130, 227
Hin1I	GRCGYC	1 cut(s)	195
Hin6I	GCGC	5 cut(s)	51, 80, 100, 128, 225
HinP1I	GCGC	5 cut(s)	51, 80, 100, 128, 225
HincII	GTYRAC	1 cut(s)	199
HindII	GTYRAC	1 cut(s)	199
HinfI	GANTC	9 cut(s)	232, 905, 951, 1316, 1566, 1854, 1930, 2122, 2243
HpaII	CCGG	2 cut(s)	44, 135
HphI	GGTGA	5 cut(s)	448, 665, 860, 2180, 2192
Hpy166II	GTNNAC	3 cut(s)	199, 375, 966
Hpy188I	TCNGA	9 cut(s)	237, 250, 883, 1191, 1640, 1809, 1973, 2110, 2143
Hpy188III	TCNNGA	5 cut(s)	319, 803, 1589, 1897, 2293
Hpy8I	GTNNAC	3 cut(s)	199, 375, 966
Hpy99I	CGWCG	2 cut(s)	215, 218
HpyAV	CCTTC	9 cut(s)	185, 245, 274, 340, 538, 659, 1174, 2185, 2272
HpyCH4III	ACNGT	5 cut(s)	211, 433, 1111, 1705, 2279
HpyF3I	CTNAG	3 cut(s)	219, 1269, 1472
Hsp92I	GRCGYC	1 cut(s)	195
HspAI	GCGC	5 cut(s)	51, 80, 100, 128, 225
LguI	GCTCTTC	1 cut(s)	2294
LmnI	GCTCC	2 cut(s)	2110, 2263
LweI	GCATC	6 cut(s)	1458, 1492, 1573, 1582, 1900, 1922
MabI	ACCWGGT	1 cut(s)	1936
MaeI	CTAG	1 cut(s)	1281
MaeIII	GTNAC	6 cut(s)	109, 385, 1264, 1520, 2168, 2180
MboII	GAAGA	9 cut(s)	166, 289, 316, 322, 415, 818, 1798, 2281, 2290
MfeI	CAATTG	4 cut(s)	1134, 1211, 1497, 1617
MflI	RGATCY	5 cut(s)	63, 878, 1640, 1899, 2295
MhlI	GDGCHC	4 cut(s)	377, 1478, 1515, 1945
MlyI	GAGTC	3 cut(s)	1848, 2116, 2252
MmeI	TCCRAC	4 cut(s)	760, 1951, 2079, 2166
Mph1103I	ATGCAT	2 cut(s)	1291, 1915
MroXI	GAANNNNTTC	2 cut(s)	161, 350
MseI	TTAA	2 cut(s)	1019, 2226
MslI	CAYNNNNRTG	4 cut(s)	971, 1451, 1781, 2237
MspA1I	CMGCKG	2 cut(s)	643, 827
MspI	CCGG	2 cut(s)	44, 135
MspR9I	CCNGG	9 cut(s)	44, 135, 136, 335, 511, 1851, 1938, 2009, 2036
MunI	CAATTG	4 cut(s)	1134, 1211, 1497, 1617
Mva1269I	GAATGC	2 cut(s)	244, 1005
MvaI	CCWGG	6 cut(s)	335, 511, 1851, 1938, 2009, 2036
MvnI	CGCG	4 cut(s)	80, 100, 102, 128
NciI	CCSGG	3 cut(s)	44, 135, 136
NdeI	CATATG	1 cut(s)	898
NlaIV	GGNNCC	9 cut(s)	142, 340, 769, 880, 1513, 1675, 1942, 2017, 2140
NmeAIII	GCCGAG	1 cut(s)	253
NmuCI	GTSAC	6 cut(s)	109, 385, 1264, 1520, 2168, 2180
NsiI	ATGCAT	2 cut(s)	1291, 1915
NspI	RCATGY	1 cut(s)	2117
PaeI	GCATGC	1 cut(s)	2117
PaqCI	CACCTGC	1 cut(s)	404
PceI	AGGCCT	2 cut(s)	548, 669
PciSI	GCTCTTC	1 cut(s)	2294
PcsI	WCGNNNNNNNCGW	2 cut(s)	165, 207
PctI	GAATGC	2 cut(s)	244, 1005
PdmI	GAANNNNTTC	2 cut(s)	161, 350
PfeI	GAWTC	6 cut(s)	232, 905, 951, 1316, 1566, 1930
PleI	GAGTC	3 cut(s)	1848, 2116, 2251
PpsI	GAGTC	3 cut(s)	1848, 2116, 2251
Psp6I	CCWGG	6 cut(s)	333, 509, 1849, 1936, 2007, 2034
PspEI	GGTNACC	1 cut(s)	2180
PspFI	CCCAGC	3 cut(s)	823, 1143, 1598
PspGI	CCWGG	6 cut(s)	333, 509, 1849, 1936, 2007, 2034
PspN4I	GGNNCC	9 cut(s)	142, 340, 769, 880, 1513, 1675, 1942, 2017, 2140
PspOMI	GGGCCC	1 cut(s)	1511
PspPI	GGNCC	7 cut(s)	339, 613, 1511, 1512, 2129, 2139, 2204
PstI	CTGCAG	2 cut(s)	421, 2161
PstNI	CAGNNNCTG	1 cut(s)	1457
PsuI	RGATCY	5 cut(s)	63, 878, 1640, 1899, 2295
PvuII	CAGCTG	2 cut(s)	643, 827
RsaI	GTAC	3 cut(s)	20, 647, 2090
RsaNI	GTAC	3 cut(s)	19, 646, 2089
RseI	CAYNNNNRTG	4 cut(s)	971, 1451, 1781, 2237
SapI	GCTCTTC	1 cut(s)	2294
SaqAI	TTAA	2 cut(s)	1019, 2226
Sau96I	GGNCC	7 cut(s)	339, 613, 1511, 1512, 2129, 2139, 2204
SchI	GAGTC	3 cut(s)	1848, 2116, 2252
ScrFI	CCNGG	9 cut(s)	44, 135, 136, 335, 511, 1851, 1938, 2009, 2036
SduI	GDGCHC	4 cut(s)	377, 1478, 1515, 1945
SexAI	ACCWGGT	1 cut(s)	1936
SfaNI	GCATC	6 cut(s)	1458, 1492, 1573, 1582, 1900, 1922
SfcI	CTRYAG	4 cut(s)	417, 1321, 1485, 2157
SinI	GGWCC	3 cut(s)	339, 613, 2139
SmaI	CCCGGG	1 cut(s)	136
SmiMI	CAYNNNNRTG	4 cut(s)	971, 1451, 1781, 2237
SphI	GCATGC	1 cut(s)	2117
SseBI	AGGCCT	2 cut(s)	548, 669
SsiI	CCGC	4 cut(s)	5, 121, 131, 314
SspMI	CTAG	1 cut(s)	1281
StuI	AGGCCT	2 cut(s)	548, 669
StyD4I	CCNGG	9 cut(s)	42, 133, 134, 333, 509, 1849, 1936, 2007, 2034
StyI	CCWWGG	1 cut(s)	750
TaaI	ACNGT	5 cut(s)	211, 433, 1111, 1705, 2279
TaqI	TCGA	2 cut(s)	675, 1564
TatI	WGTACW	2 cut(s)	645, 2088
TauI	GCSGC	1 cut(s)	133
TfiI	GAWTC	6 cut(s)	232, 905, 951, 1316, 1566, 1930
Tru1I	TTAA	2 cut(s)	1019, 2226
Tru9I	TTAA	2 cut(s)	1019, 2226
TseFI	GTSAC	6 cut(s)	109, 385, 1264, 1520, 2168, 2180
Tsp45I	GTSAC	6 cut(s)	109, 385, 1264, 1520, 2168, 2180
TspDTI	ATGAA	3 cut(s)	289, 500, 1799
TspGWI	ACGGA	4 cut(s)	44, 331, 1219, 1559
TspMI	CCCGGG	1 cut(s)	134
VneI	GTGCAC	1 cut(s)	373
VpaK11BI	GGWCC	3 cut(s)	339, 613, 2139
XagI	CCTNNNNNAGG	2 cut(s)	179, 674
XceI	RCATGY	1 cut(s)	2117
XcmI	CCANNNNNNNNNTGG	3 cut(s)	517, 607, 1789
XmaI	CCCGGG	1 cut(s)	134
XmnI	GAANNNNTTC	2 cut(s)	161, 350
XspI	CTAG	1 cut(s)	1281
Zsp2I	ATGCAT	2 cut(s)	1291, 1915

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.