Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr12

Orthogroup ID

OG0000897

Physical Location & Seq

Genomic Coordinates Forward (+)

28698822 .. 28703094

Gene Structure 4273 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD12G1206600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2280 bp

ATGGGTTTGCTGAGTGAGGGACTGACACAGATTGTGATTCCCTTGGCTGCGGTTGTGGGGCTTGGTTTTGCTTTGCTGCAGTGGTTTTTGGTGTCAAGGGTGAAGGTCTCTGGTGGGCATGGTGAGCGAAATGGGTACAAGGACAAGCTCATTGGAGAAGAAGAAGAGGGTGTTAACTCTCTTGAGGTTACCATCAAGTGTGCTGAGATCCAGCATGCCATTTCCATTGGGGCGACCTCTTTTCTCTTTACCCAATACAAATACCTCAGCATCTTCGTTGGCGTTTTTAGCGCCATCATCTTCCTCTTCCTTGGCTCAGTGAAGGGTTTCAGCACCAAAAGTGAACCCTGCACATATAACACAGGCAACATGTGCAAGCCGGCACTAGCCAACGCCTTCTTCAGTACCGTTGCCTTCTTGCTCGGTGCTTTTACATCTGTTCTCTCTGGATTTCTTGGGATGAAGATCGCAACATATGCCAATGCCAGAACAACCCTAGAAGCAAGGAGGGGTGTTGGGAAGGCTTTCATCACCGCTTTTCGCTCGGGTGCTGTGATGGGGTTCCTTCTTGCTGCCAATGGACTTTTAGTGCTGTATGCGTCCATAAACCTATTTAAGCTGTATTATGGGGATGACTGGGAAGGACTGTACGAGTCAATTACTGGTTATGGACTTGGAGGTTCTTCAATGGCACTCTTTGGAAGAGTCGGGGGAGGCATATACACGAAAGCAGCTGATGTTGGTGCTGACCTTGTTGGGAAAGTTGAACGAAATATCCCCGAAGATGATCCACGAAACCCTGCTGTTATTGCAGACAATGTGGGTGACAACGTAGGAGACATTGCCGGGATGGGATCTGACCTGTTCGGATCTTATGCCGAGTCATCTTGTGCAGCATTGTTTGTTGCATCCATATCATCCTTTGGCATCGGTCATGACTACACCGCTATGTCGTATCCCTTGATCATAAGTTCAATGGGGATTGTGGTTTGTTTGATAACAACCCTTTTCGCAACAGATCTGTTTGAGATCAAGAAAGTCAGTGAGATCGAACCCGCTTTGAAGCGTCAACTCGTTATCTCAACCGTCTTAATGACTGTTGGGATCGCCGTGGTCACCTTTGTAGCTTTGCCATCAGAGTTCACTCTCTTCAGCTTTGGAACCAATAAGGCTGTCAAGAACTGGTACCTCTTCTTTTGTGTAGCAATTGGCTTGTGGGCTGGCCTTGTTATCGGATACACTACAGAGTATTACACTAGCAATGCTTACAGTCCGGTACAGGATGTGGCGGATTCTTGCAGGACTGGTGCTGCAACGAACGTGATTTTCGGGCTGGCTCTTGGTTACAAATCAGTCATCATTCCTGTGTTCGCCATTGCGTTTGCTATCTACGTTAGCTTTAGTTTGGCTGCCATGTATGGAATTGCTGTGGCTGCTTTGGGAATGCTGAGCACTATCTCCACAGGTCTTGCAATTGATGCTTATGGCCCAATAAGTGACAATGCTGGTGGGATCGCAGAGATGGCCGGGATGAGCCATGAGATACGCGAAAGAACAGATGCTTTAGATGCTGCTGGAAACACAACTGCTGCTATTGGCAAGGGTTTTGCTATTGGATCGGCTGCTCTTGTTTCTCTTGCTTTGTTCGGTGCCTATGTCAGCAGAGCCGGAATAGAGACTGTTGATGTGTTGACGCCGAAAGTCTTCATTGGCCTGCTTGTGGGAGCTATGCTTCCCTACTGGTTTTCTGCCATGACAATGAAGAGTGTGGGAAGTGCAGCGCTTAAAATGGTCGAAGAGGTTCGCAGGCAATTCAACACAATTCCGGGGCTCATGGAAGGAACAGCAAAGCCAGATTACGCAACGTGCGTCAAGATTTCCACAGATGCTTCCCTCAAGGAGATGATCCCGCCAGGCGCTTTGGTCATGCTTACACCACTCATTGCCGGCACCTTCTTTGGAGTTGAAACTCTTGCCGGGATTCTTGCTGGTTCACTTGTTTCCGGTGTGCAGATTGCCATTTCTGCTTCCAACACTGGAGGCGCATGGGATAATGCAAAGAAGTACATAGAGGCCGGCGCTTCAGAACATGCTAAGTCACTAGGTCCCAAGGGTTCGGAGCCCCACAAGGCGGCCGTCATAGGTGATACGATCGGAGATCCGCTCAAGGACACTTCAGGTCCTTCGCTCAATATTCTGATCAAGCTCATGGCAGTTGAGTCCTTGGTGTTTGCTCCTTTCTTTGCAGCTCATGGAGGCCTCCTCTTCAAATGGCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0001101 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005768 GO:0005773 GO:0005774 GO:0005794 GO:0005886 GO:0006810 GO:0006811 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0009414 GO:0009415 GO:0009507 GO:0009526 GO:0009536 GO:0009628 GO:0009651 GO:0009678 GO:0009705 GO:0009914 GO:0009926 GO:0009941 GO:0010008 GO:0010035 GO:0010248 GO:0010817 GO:0012505 GO:0015399 GO:0015405 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0022804 GO:0022857 GO:0031090 GO:0031410 GO:0031967 GO:0031975 GO:0031982 GO:0032501 GO:0032502 GO:0034220 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044433 GO:0044434 GO:0044435 GO:0044437 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0060918 GO:0065007 GO:0065008 GO:0071944 GO:0097708 GO:0098588 GO:0098805 GO:0099402 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00190 map00190

Pfam Domains

Protein Families

H_PPase

Protein Analysis

760

Amino Acids

79.57

Weight (kDa)

5.48

Isoelectric Point (pI)

23.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
H_PPase	PF03030	64 - 744	8.6e-255	Inorganic H+ pyrophosphatase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000897)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G15690 AT1G15690
fragaria_vesca	FvH4_1g02190 FvH4_1g02190 FvH4_1g02190 FvH4_6g07370 FvH4_6g07370 FvH4_6g07370 FvH4_6g07370 FvH4_6g07370 FvH4_6g29320 FvH4_6g29320 FvH4_6g29320 FvH4_6g29320 FvH4_6g29320 FvH4_6g29320
malus_domestica	MD02G1020700.v1.1 MD04G1194100.v1.1 MD12G1206600.v1.1 MD15G1163900.v1.1 MD17G1215700.v1.1
prunus_persica	Prupe.3G091900_v2.0.a1 Prupe.6G313800_v2.0.a1 Prupe.7G250800_v2.0.a1
pyrus_communis	pycom02g01810 pycom04g17150 pycom12g19440 pycom15g14710 pycom17g22030 pycom808g00300
rosa_chinensis	RchiOBHm_Chr2g0087281 RchiOBHm_Chr2g0134531 RchiOBHm_Chr3g0456971
rosa_laevigata	RLG00000015850 RLG00000019400 RLG00000025258
rosa_multiflora	Rmu_sc0004670.1_g000006 Rmu_sc0016008.1_g000005 Rmu_sc0017477.1_g000001 Rmu_sc0017478.1_g000001 Rmu_sc0017479.1_g000001 Rmu_sc0042014.1_g000001 Rmu_ssc0000438.1_g000050
rosa_roxburghii	Rroxscaffold_2G00110050 Rroxscaffold_2G00153750 Rroxscaffold_6G00422310
rosa_rugosa	Rorug01G0473600 Rorug02G0318400 Rorug03G0017900
rosa_samantha	Rh2AG027400 Rh2AG375000 Rh2AG375100 Rh2BG026600 Rh2BG376300 Rh2CG027700 Rh2CG354500 Rh2DG027300 Rh2DG393700 Rh3AG077800 Rh3BG079700 Rh3CG079600 Rh3DG081400
rosa_wichuraiana	Rw2G002150 Rw2G030190 Rw3G006670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1185
AccB1I	GGYRCC	3 cut(s)	1185, 1649, 1949
AccBSI	CCGCTC	1 cut(s)	2164
AccII	CGCG	1 cut(s)	1548
AciI	CCGC	8 cut(s)	50, 534, 945, 1056, 1289, 1910, 2132, 2162
AclWI	GGATC	9 cut(s)	202, 782, 862, 877, 1112, 1520, 1624, 1900, 2153
AcoI	YGGCCR	2 cut(s)	1524, 2133
AcuI	CTGAAG	4 cut(s)	385, 1135, 2067, 2160
AcyI	GRCGYC	1 cut(s)	1694
AfaI	GTAC	6 cut(s)	137, 406, 650, 1187, 1278, 2066
AfeI	AGCGCT	1 cut(s)	1782
AfiI	CCNNNNNNNGG	2 cut(s)	1720, 2131
AflIII	ACRYGT	1 cut(s)	369
AgsI	TTSAA	7 cut(s)	687, 767, 975, 1063, 1816, 1967, 2269
AjnI	CCWGG	1 cut(s)	1912
AjuI	GAANNNNNNNTTGG	2 cut(s)	383, 415
AloI	GAACNNNNNNTCC	2 cut(s)	759, 791
AluBI	AGCT	9 cut(s)	148, 619, 734, 1127, 1155, 1398, 1727, 2206, 2249
AluI	AGCT	9 cut(s)	148, 619, 734, 1127, 1155, 1398, 1727, 2206, 2249
Alw21I	GWGCWC	1 cut(s)	1454
Alw26I	GTCTC	3 cut(s)	112, 831, 1670
AlwI	GGATC	9 cut(s)	202, 782, 862, 877, 1112, 1520, 1624, 1900, 2153
Ama87I	CYCGRG	1 cut(s)	544
Aor51HI	AGCGCT	1 cut(s)	1782
AoxI	GGCC	7 cut(s)	1222, 1486, 1524, 1711, 2073, 2133, 2257
Asp700I	GAANNNNTTC	4 cut(s)	326, 524, 1703, 1800
Asp718I	GGTACC	1 cut(s)	1185
AspLEI	GCGC	5 cut(s)	293, 1783, 1919, 2045, 2081
AspS9I	GGNCC	3 cut(s)	1487, 2105, 2180
AsuC2I	CCSGG	4 cut(s)	847, 1528, 1827, 1978
AsuHPI	GGTGA	6 cut(s)	112, 134, 523, 836, 1108, 2156
AvaI	CYCGRG	1 cut(s)	544
AvaII	GGWCC	2 cut(s)	2105, 2180
BanI	GGYRCC	3 cut(s)	1185, 1649, 1949
BanII	GRGCYC	2 cut(s)	1833, 2124
BbsI	GAAGAC	1 cut(s)	1696
Bbv12I	GWGCWC	1 cut(s)	1454
BbvCI	CCTCAGC	1 cut(s)	266
BccI	CCATC	6 cut(s)	200, 302, 550, 844, 1141, 1516
BceAI	ACGGC	2 cut(s)	1094, 2120
BciT130I	CCWGG	1 cut(s)	1914
BciVI	GTATCC	2 cut(s)	966, 1229
BclI	TGATCA	2 cut(s)	963, 2199
BcnI	CCSGG	4 cut(s)	847, 1528, 1827, 1978
BcoDI	GTCTC	3 cut(s)	112, 831, 1670
BfaI	CTAG	4 cut(s)	386, 497, 1257, 2102
BfmI	CTRYAG	2 cut(s)	77, 1242
BfoI	RGCGCY	4 cut(s)	294, 1784, 1920, 2082
BfuI	GTATCC	2 cut(s)	966, 1229
BglII	AGATCT	1 cut(s)	1018
BlpI	GCTNAGC	1 cut(s)	1448
Bme1390I	CCNGG	5 cut(s)	847, 1528, 1827, 1914, 1978
Bme18I	GGWCC	2 cut(s)	2105, 2180
BmeT110I	CYCGRG	1 cut(s)	544
BmgT120I	GGNCC	3 cut(s)	1487, 2105, 2180
BmiI	GGNNCC	7 cut(s)	563, 1162, 1187, 1651, 1951, 2107, 2121
BmrFI	CCNGG	5 cut(s)	847, 1528, 1827, 1914, 1978
BmrI	ACTGGG	1 cut(s)	646
BmsI	GCATC	7 cut(s)	279, 917, 936, 1468, 1549, 1558, 1876
BmuI	ACTGGG	1 cut(s)	646
BpiI	GAAGAC	1 cut(s)	1696
BplI	GAGNNNNNCTC	4 cut(s)	2148, 2180, 2247, 2279
BpmI	CTGGAG	1 cut(s)	2058
Bpu10I	CCTNAGC	1 cut(s)	266
Bpu1102I	GCTNAGC	1 cut(s)	1448
BpuEI	CTTGAG	3 cut(s)	203, 1880, 2150
BpuMI	CCSGG	4 cut(s)	847, 1528, 1827, 1978
BsaBI	GATNNNNATC	1 cut(s)	464
BsaHI	GRCGYC	1 cut(s)	1694
BsaI	GGTCTC	1 cut(s)	112
BsaJI	CCNNGG	6 cut(s)	42, 310, 1110, 1826, 2109, 2223
BsaWI	WCCGGW	2 cut(s)	1273, 2003
Bsc4I	CCNNNNNNNGG	2 cut(s)	1720, 2131
Bse118I	RCCGGY	3 cut(s)	379, 1946, 2075
Bse1I	ACTGG	6 cut(s)	641, 667, 1187, 1309, 1745, 2041
Bse3DI	GCAATG	4 cut(s)	840, 1267, 1374, 1941
Bse8I	GATNNNNATC	1 cut(s)	464
BseBI	CCWGG	1 cut(s)	1914
BseDI	CCNNGG	6 cut(s)	42, 310, 1110, 1826, 2109, 2223
BseGI	GGATG	7 cut(s)	465, 637, 855, 908, 917, 1288, 1536
BseJI	GATNNNNATC	1 cut(s)	464
BseLI	CCNNNNNNNGG	2 cut(s)	1720, 2131
BseMI	GCAATG	4 cut(s)	840, 1267, 1374, 1941
BseMII	CTCAG	4 cut(s)	195, 280, 330, 1439
BseNI	ACTGG	6 cut(s)	641, 667, 1187, 1309, 1745, 2041
BseRI	GAGGAG	1 cut(s)	2252
BseX3I	CGGCCG	1 cut(s)	2133
BsgI	GTGCAG	4 cut(s)	334, 912, 1797, 2030
Bsh1236I	CGCG	1 cut(s)	1548
Bsh1285I	CGRYCG	2 cut(s)	2136, 2154
BshFI	GGCC	7 cut(s)	1224, 1488, 1526, 1713, 2075, 2135, 2259
BshNI	GGYRCC	3 cut(s)	1185, 1649, 1949
BsiEI	CGRYCG	2 cut(s)	2136, 2154
BsiHKAI	GWGCWC	1 cut(s)	1454
BsiHKCI	CYCGRG	1 cut(s)	544
BslFI	GGGAC	2 cut(s)	33, 2091
BslI	CCNNNNNNNGG	2 cut(s)	1720, 2131
BsmAI	GTCTC	3 cut(s)	112, 831, 1670
BsmFI	GGGAC	2 cut(s)	33, 2091
BsmI	GAATGC	1 cut(s)	1449
BsnI	GGCC	7 cut(s)	1224, 1488, 1526, 1713, 2075, 2135, 2259
Bso31I	GGTCTC	1 cut(s)	112
BsoBI	CYCGRG	1 cut(s)	544
Bsp1286I	GDGCHC	3 cut(s)	1454, 1833, 2124
Bsp1720I	GCTNAGC	1 cut(s)	1448
BspACI	CCGC	8 cut(s)	50, 534, 945, 1056, 1289, 1910, 2132, 2162
BspANI	GGCC	7 cut(s)	1224, 1488, 1526, 1713, 2075, 2135, 2259
BspCNI	CTCAG	4 cut(s)	196, 279, 329, 1440
BspFNI	CGCG	1 cut(s)	1548
BspHI	TCATGA	1 cut(s)	934
BspLI	GGNNCC	7 cut(s)	563, 1162, 1187, 1651, 1951, 2107, 2121
BspMAI	CTGCAG	1 cut(s)	81
BspPI	GGATC	9 cut(s)	202, 782, 862, 877, 1112, 1520, 1624, 1900, 2153
BspT107I	GGYRCC	3 cut(s)	1185, 1649, 1949
BspTNI	GGTCTC	1 cut(s)	112
BsrBI	CCGCTC	1 cut(s)	2164
BsrDI	GCAATG	4 cut(s)	840, 1267, 1374, 1941
BsrFI	RCCGGY	3 cut(s)	379, 1946, 2075
BsrI	ACTGG	6 cut(s)	641, 667, 1187, 1309, 1745, 2041
BssAI	RCCGGY	3 cut(s)	379, 1946, 2075
BssECI	CCNNGG	6 cut(s)	42, 310, 1110, 1826, 2109, 2223
BssNI	GRCGYC	1 cut(s)	1694
BssT1I	CCWWGG	4 cut(s)	42, 310, 2109, 2223
Bst2UI	CCWGG	1 cut(s)	1914
Bst4CI	ACNGT	6 cut(s)	409, 648, 1087, 1099, 1271, 1681
Bst6I	CTCTTC	8 cut(s)	159, 311, 697, 1154, 1196, 1757, 1791, 2270
BstACI	GRCGYC	1 cut(s)	1694
BstAPI	GCANNNNNTGC	3 cut(s)	372, 476, 1478
BstC8I	GCNNGC	9 cut(s)	216, 377, 381, 1222, 1335, 1715, 1808, 1948, 2077
BstDEI	CTNAG	6 cut(s)	11, 204, 266, 316, 1448, 2094
BstDSI	CCRYGG	1 cut(s)	1110
BstEII	GGTNACC	2 cut(s)	187, 1114
BstF5I	GGATG	7 cut(s)	465, 637, 855, 908, 917, 1288, 1536
BstFNI	CGCG	1 cut(s)	1548
BstH2I	RGCGCY	4 cut(s)	294, 1784, 1920, 2082
BstHHI	GCGC	5 cut(s)	293, 1783, 1919, 2045, 2081
BstMAI	GTCTC	3 cut(s)	112, 831, 1670
BstMCI	CGRYCG	2 cut(s)	2136, 2154
BstNI	CCWGG	1 cut(s)	1914
BstNSI	RCATGY	3 cut(s)	218, 373, 2093
BstPI	GGTNACC	2 cut(s)	187, 1114
BstSCI	CCNGG	5 cut(s)	845, 1526, 1825, 1912, 1976
BstSFI	CTRYAG	2 cut(s)	77, 1242
BstUI	CGCG	1 cut(s)	1548
BstV2I	GAAGAC	1 cut(s)	1696
BstX2I	RGATCY	5 cut(s)	207, 854, 869, 1018, 2158
BstYI	RGATCY	5 cut(s)	207, 854, 869, 1018, 2158
BstZI	CGGCCG	1 cut(s)	2133
BsuI	GTATCC	2 cut(s)	966, 1229
BsuRI	GGCC	7 cut(s)	1224, 1488, 1526, 1713, 2075, 2135, 2259
BtgI	CCRYGG	1 cut(s)	1110
BtsCI	GGATG	7 cut(s)	465, 637, 855, 908, 917, 1288, 1536
BtsI	GCAGTG	1 cut(s)	86
BtsIMutI	CAGTG	4 cut(s)	86, 324, 1048, 2034
Cac8I	GCNNGC	9 cut(s)	216, 377, 381, 1222, 1335, 1715, 1808, 1948, 2077
CciI	TCATGA	1 cut(s)	934
CfoI	GCGC	5 cut(s)	293, 1783, 1919, 2045, 2081
Cfr10I	RCCGGY	3 cut(s)	379, 1946, 2075
Cfr13I	GGNCC	3 cut(s)	1487, 2105, 2180
CseI	GACGC	4 cut(s)	588, 1055, 1702, 1858
Csp6I	GTAC	6 cut(s)	136, 405, 649, 1186, 1277, 2065
CspCI	CAANNNNNGTGG	4 cut(s)	1450, 1485, 1489, 1524
CviQI	GTAC	6 cut(s)	136, 405, 649, 1186, 1277, 2065
DdeI	CTNAG	6 cut(s)	11, 204, 266, 316, 1448, 2094
EaeI	YGGCCR	2 cut(s)	1524, 2133
EagI	CGGCCG	1 cut(s)	2133
Eam1104I	CTCTTC	8 cut(s)	159, 311, 697, 1154, 1196, 1757, 1791, 2270
EarI	CTCTTC	8 cut(s)	159, 311, 697, 1154, 1196, 1757, 1791, 2270
EciI	GGCGGA	1 cut(s)	1304
EclXI	CGGCCG	1 cut(s)	2133
Eco130I	CCWWGG	4 cut(s)	42, 310, 2109, 2223
Eco147I	AGGCCT	1 cut(s)	2259
Eco24I	GRGCYC	2 cut(s)	1833, 2124
Eco31I	GGTCTC	1 cut(s)	112
Eco47I	GGWCC	2 cut(s)	2105, 2180
Eco47III	AGCGCT	1 cut(s)	1782
Eco52I	CGGCCG	1 cut(s)	2133
Eco57I	CTGAAG	4 cut(s)	385, 1135, 2067, 2160
Eco88I	CYCGRG	1 cut(s)	544
Eco91I	GGTNACC	2 cut(s)	187, 1114
EcoO109I	RGGNCCY	2 cut(s)	2105, 2180
EcoO65I	GGTNACC	2 cut(s)	187, 1114
EcoRII	CCWGG	1 cut(s)	1912
EcoT14I	CCWWGG	4 cut(s)	42, 310, 2109, 2223
EcoT38I	GRGCYC	2 cut(s)	1833, 2124
ErhI	CCWWGG	4 cut(s)	42, 310, 2109, 2223
FaqI	GGGAC	2 cut(s)	33, 2091
FauI	CCCGC	2 cut(s)	1063, 1917
FauNDI	CATATG	1 cut(s)	475
FbaI	TGATCA	2 cut(s)	963, 2199
FokI	GGATG	7 cut(s)	472, 644, 862, 895, 904, 1295, 1543
FriOI	GRGCYC	2 cut(s)	1833, 2124
FspBI	CTAG	4 cut(s)	386, 497, 1257, 2102
GlaI	GCGC	5 cut(s)	292, 1782, 1918, 2044, 2080
GsuI	CTGGAG	1 cut(s)	2058
HaeII	RGCGCY	4 cut(s)	294, 1784, 1920, 2082
HaeIII	GGCC	7 cut(s)	1224, 1488, 1526, 1713, 2075, 2135, 2259
HgaI	GACGC	4 cut(s)	588, 1055, 1702, 1858
HhaI	GCGC	5 cut(s)	293, 1783, 1919, 2045, 2081
Hin1I	GRCGYC	1 cut(s)	1694
Hin6I	GCGC	5 cut(s)	291, 1781, 1917, 2043, 2079
HinP1I	GCGC	5 cut(s)	291, 1781, 1917, 2043, 2079
HincII	GTYRAC	3 cut(s)	175, 1070, 1692
HindII	GTYRAC	3 cut(s)	175, 1070, 1692
HinfI	GANTC	7 cut(s)	37, 653, 705, 881, 1292, 1981, 2219
HpaI	GTTAAC	1 cut(s)	175
HphI	GGTGA	6 cut(s)	112, 134, 523, 836, 1108, 2156
Hpy166II	GTNNAC	6 cut(s)	175, 344, 1070, 1143, 1692, 1994
Hpy188I	TCNGA	8 cut(s)	859, 869, 1138, 1235, 2086, 2119, 2156, 2199
Hpy188III	TCNNGA	6 cut(s)	182, 447, 935, 1033, 1177, 1873
Hpy8I	GTNNAC	6 cut(s)	175, 344, 1070, 1143, 1692, 1994
HpyCH4III	ACNGT	6 cut(s)	409, 648, 1087, 1099, 1271, 1681
HpyCH4IV	ACGT	4 cut(s)	831, 1320, 1392, 1865
HpyF3I	CTNAG	6 cut(s)	11, 204, 266, 316, 1448, 2094
HpySE526I	ACGT	4 cut(s)	831, 1320, 1392, 1865
Hsp92I	GRCGYC	1 cut(s)	1694
HspAI	GCGC	5 cut(s)	291, 1781, 1917, 2043, 2079
KpnI	GGTACC	1 cut(s)	1189
KroI	GCCGGC	3 cut(s)	379, 1946, 2075
KroNI	GCCGGC	3 cut(s)	381, 1948, 2077
Ksp22I	TGATCA	2 cut(s)	963, 2199
KspAI	GTTAAC	1 cut(s)	175
LmnI	GCTCC	3 cut(s)	1724, 2119, 2239
LweI	GCATC	7 cut(s)	279, 917, 936, 1468, 1549, 1558, 1876
MaeI	CTAG	4 cut(s)	386, 497, 1257, 2102
MaeII	ACGT	4 cut(s)	831, 1320, 1392, 1865
MaeIII	GTNAC	6 cut(s)	187, 824, 1114, 1343, 1496, 2097
MbiI	CCGCTC	1 cut(s)	2164
MfeI	CAATTG	2 cut(s)	1206, 1473
MflI	RGATCY	5 cut(s)	207, 854, 869, 1018, 2158
MhlI	GDGCHC	3 cut(s)	1454, 1833, 2124
MluCI	AATT	6 cut(s)	657, 1206, 1422, 1473, 1811, 1821
MlyI	GAGTC	4 cut(s)	662, 714, 890, 2228
MmeI	TCCRAC	1 cut(s)	2055
MroNI	GCCGGC	3 cut(s)	379, 1946, 2075
MroXI	GAANNNNTTC	4 cut(s)	326, 524, 1703, 1800
MseI	TTAA	4 cut(s)	174, 615, 1091, 1785
MslI	CAYNNNNRTG	3 cut(s)	947, 1364, 1757
MspA1I	CMGCKG	1 cut(s)	734
MspR9I	CCNGG	5 cut(s)	847, 1528, 1827, 1914, 1978
MunI	CAATTG	2 cut(s)	1206, 1473
Mva1269I	GAATGC	1 cut(s)	1449
MvaI	CCWGG	1 cut(s)	1914
MvnI	CGCG	1 cut(s)	1548
NaeI	GCCGGC	3 cut(s)	381, 1948, 2077
NciI	CCSGG	4 cut(s)	847, 1528, 1827, 1978
NdeI	CATATG	1 cut(s)	475
NgoMIV	GCCGGC	3 cut(s)	379, 1946, 2075
NlaIV	GGNNCC	7 cut(s)	563, 1162, 1187, 1651, 1951, 2107, 2121
NmeAIII	GCCGAG	1 cut(s)	904
NmuCI	GTSAC	4 cut(s)	824, 1114, 1496, 2097
NspI	RCATGY	3 cut(s)	218, 373, 2093
PaeI	GCATGC	1 cut(s)	218
PagI	TCATGA	1 cut(s)	934
PceI	AGGCCT	1 cut(s)	2259
PciI	ACATGT	1 cut(s)	369
PcsI	WCGNNNNNNNCGW	1 cut(s)	1866
PctI	GAATGC	1 cut(s)	1449
PdiI	GCCGGC	3 cut(s)	381, 1948, 2077
PdmI	GAANNNNTTC	4 cut(s)	326, 524, 1703, 1800
PfeI	GAWTC	3 cut(s)	37, 1292, 1981
Ple19I	CGATCG	1 cut(s)	2154
PleI	GAGTC	4 cut(s)	661, 713, 889, 2227
PpsI	GAGTC	4 cut(s)	661, 713, 889, 2227
PpuMI	RGGWCCY	2 cut(s)	2105, 2180
PscI	ACATGT	1 cut(s)	369
Psp5II	RGGWCCY	2 cut(s)	2105, 2180
Psp6I	CCWGG	1 cut(s)	1912
PspEI	GGTNACC	2 cut(s)	187, 1114
PspGI	CCWGG	1 cut(s)	1912
PspN4I	GGNNCC	7 cut(s)	563, 1162, 1187, 1651, 1951, 2107, 2121
PspPI	GGNCC	3 cut(s)	1487, 2105, 2180
PspPPI	RGGWCCY	2 cut(s)	2105, 2180
PstI	CTGCAG	1 cut(s)	81
PsuI	RGATCY	5 cut(s)	207, 854, 869, 1018, 2158
PvuI	CGATCG	1 cut(s)	2154
PvuII	CAGCTG	1 cut(s)	734
RsaI	GTAC	6 cut(s)	137, 406, 650, 1187, 1278, 2066
RsaNI	GTAC	6 cut(s)	136, 405, 649, 1186, 1277, 2065
RseI	CAYNNNNRTG	3 cut(s)	947, 1364, 1757
SaqAI	TTAA	4 cut(s)	174, 615, 1091, 1785
Sau96I	GGNCC	3 cut(s)	1487, 2105, 2180
SchI	GAGTC	4 cut(s)	662, 714, 890, 2228
ScrFI	CCNGG	5 cut(s)	847, 1528, 1827, 1914, 1978
SduI	GDGCHC	3 cut(s)	1454, 1833, 2124
SfaNI	GCATC	7 cut(s)	279, 917, 936, 1468, 1549, 1558, 1876
SfcI	CTRYAG	2 cut(s)	77, 1242
SinI	GGWCC	2 cut(s)	2105, 2180
SmiMI	CAYNNNNRTG	3 cut(s)	947, 1364, 1757
SmlI	CTYRAG	3 cut(s)	182, 1895, 2165
SmoI	CTYRAG	3 cut(s)	182, 1895, 2165
SphI	GCATGC	1 cut(s)	218
Sse9I	AATT	6 cut(s)	657, 1206, 1422, 1473, 1811, 1821
SseBI	AGGCCT	1 cut(s)	2259
SsiI	CCGC	8 cut(s)	50, 534, 945, 1056, 1289, 1910, 2132, 2162
SspI	AATATT	1 cut(s)	2194
SspMI	CTAG	4 cut(s)	386, 497, 1257, 2102
StuI	AGGCCT	1 cut(s)	2259
StyD4I	CCNGG	5 cut(s)	845, 1526, 1825, 1912, 1976
StyI	CCWWGG	4 cut(s)	42, 310, 2109, 2223
TaaI	ACNGT	6 cut(s)	409, 648, 1087, 1099, 1271, 1681
TaiI	ACGT	4 cut(s)	834, 1323, 1395, 1868
TaqI	TCGA	2 cut(s)	1050, 1794
TaqII	GACCGA	1 cut(s)	920
TasI	AATT	6 cut(s)	657, 1206, 1422, 1473, 1811, 1821
TatI	WGTACW	1 cut(s)	2064
TauI	GCSGC	1 cut(s)	2135
TfiI	GAWTC	3 cut(s)	37, 1292, 1981
Tru1I	TTAA	4 cut(s)	174, 615, 1091, 1785
Tru9I	TTAA	4 cut(s)	174, 615, 1091, 1785
TscAI	CASTG	4 cut(s)	86, 324, 1048, 2041
TseFI	GTSAC	4 cut(s)	824, 1114, 1496, 2097
Tsp45I	GTSAC	4 cut(s)	824, 1114, 1496, 2097
TspDTI	ATGAA	4 cut(s)	476, 517, 1696, 1775
TspRI	CASTG	4 cut(s)	86, 324, 1048, 2041
VpaK11BI	GGWCC	2 cut(s)	2105, 2180
XceI	RCATGY	3 cut(s)	218, 373, 2093
XmnI	GAANNNNTTC	4 cut(s)	326, 524, 1703, 1800
XspI	CTAG	4 cut(s)	386, 497, 1257, 2102

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.