Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003122

Physical Location & Seq

Genomic Coordinates Reverse (-)

27547098 .. 27548282

Gene Structure 1185 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G73260.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 648 bp

ATGACAAAAACTACCAAAACCATGAATCCTAAGTTTTACTTGGTTCTTGCCTTAACCGCGGTTCTGGCCTCAAACGCATATGGTGCGGTTGTAGACATCGATGGAAACGCCATGTTCCACGAAAGTTACTACGTTCTCCCTGTCATCCGTGGCCGAGGCGGAGGCCTGACTCTAGCAGGCCGCGGTGGGCAGCCATGTCCTTACGATATCGTGCAGGAATCTTCAGAAGTTGATGAGGGCATTCCCGTAAAATTCTCAAACTGGAGGCTTAAGGTTGCGTTCGTTCCCGAATCACAGAACCTCAACATCGAAACAGACGTCGGAGCCACGATCTGCATCCAGTCAACCTACTGGCGGGTCGGTGAGTTTGACCACGAGAGGAAGCAGTACTTCGTGGTTGCTGGTCCAAAGCCAGAAGGGTTCGGACAAGATTCGTTGAAGAGTTTCTTCAAGATCGAGAAATCTGGAGAGGATGCTTACAAGTTTGTGTTCTGTCCTCGGACTTGCGACTCTGGCAATCCAAAATGCAGCGATGTCGGGATATTCATAGATGAACTTGGCGTTCGTCGTTTGGCTTTAAGCGATAAGCCGTTCTTGGTTATGTTCAAAAAAGCTAATGTGACCGAAGTTTCGTCCAAGACTATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0001101 GO:0002237 GO:0002238 GO:0003674 GO:0004857 GO:0004866 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006950 GO:0006952 GO:0006970 GO:0006979 GO:0008150 GO:0008219 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009620 GO:0009624 GO:0009625 GO:0009628 GO:0009636 GO:0009651 GO:0009719 GO:0009725 GO:0009751 GO:0009892 GO:0009987 GO:0010033 GO:0010035 GO:0010466 GO:0010605 GO:0010951 GO:0012501 GO:0014070 GO:0019222 GO:0030162 GO:0030234 GO:0030414 GO:0031323 GO:0031324 GO:0032268 GO:0032269 GO:0042221 GO:0042493 GO:0042542 GO:0042742 GO:0043086 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044092 GO:0044424 GO:0044444 GO:0044464 GO:0045861 GO:0046677 GO:0048519 GO:0048523 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051336 GO:0051346 GO:0051704 GO:0051707 GO:0052547 GO:0052548 GO:0060255 GO:0061134 GO:0061135 GO:0065007 GO:0065009 GO:0080090 GO:0098542 GO:0098772 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kunitz_legume

Protein Analysis

215

Amino Acids

23.79

Weight (kDa)

6.73

Isoelectric Point (pI)

33.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Kunitz_legume	PF00197	30 - 204	2.4e-58	Trypsin and protease inhibitor

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Image

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Publication-ready

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Orthologous Genes (Group: OG0003122)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G73260
fragaria_vesca	FvH4_3g17480 FvH4_3g17480 FvH4_3g17790
malus_domestica	MD03G1251400.v1.1 MD11G1269300.v1.1 MD11G1269400.v1.1
prunus_persica	Prupe.4G155200_v2.0.a1
pyrus_communis	pycom03g19880 pycom03g19890
rosa_chinensis	RchiOBHm_Chr5g0029031 RchiOBHm_Chr5g0029081
rosa_laevigata	RLG00000033135 RLG00000033138 RLG00000033181
rosa_multiflora	Rmu_co8286077.1_g000001 Rmu_sc0001608.1_g000003 Rmu_sc0004324.1_g000002 Rmu_sc0010962.1_g000005 Rmu_sc0026501.1_g000002
rosa_roxburghii	Rroxscaffold_1G00050360
rosa_rugosa	Rorug05G0112300 Rorug05G0112400
rosa_samantha	Rh5AG204500 Rh5AG204600 Rh5AG207300 Rh5BG202800 Rh5BG203000 Rh5BG206100 Rh5CG224100 Rh5CG228200 Rh5DG206700 Rh5DG206800 Rh5DG209800
rosa_wichuraiana	Rw5G018540 Rw5G018560 Rw5G018860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	321
AccI	GTMKAC	1 cut(s)	93
AccII	CGCG	2 cut(s)	59, 183
AciI	CCGC	7 cut(s)	57, 59, 86, 159, 181, 183, 355
AcoI	YGGCCR	1 cut(s)	151
AcsI	RAATTY	1 cut(s)	251
AcuI	CTGAAG	1 cut(s)	207
AcyI	GRCGYC	1 cut(s)	318
AfaI	GTAC	1 cut(s)	389
AfiI	CCNNNNNNNGG	1 cut(s)	354
AflII	CTTAAG	1 cut(s)	269
AgsI	TTSAA	3 cut(s)	439, 451, 607
AluBI	AGCT	1 cut(s)	614
AluI	AGCT	1 cut(s)	614
AoxI	GGCC	4 cut(s)	66, 151, 163, 178
ApeKI	GCWGC	2 cut(s)	190, 528
ApoI	RAATTY	1 cut(s)	251
ArsI	GACNNNNNNTTYG	4 cut(s)	303, 335, 613, 645
Asp700I	GAANNNNTTC	1 cut(s)	443
AspS9I	GGNCC	1 cut(s)	404
AsuHPI	GGTGA	1 cut(s)	374
AvaII	GGWCC	1 cut(s)	404
BauI	CACGAG	1 cut(s)	374
BbvI	GCAGC	2 cut(s)	202, 540
BccI	CCATC	1 cut(s)	95
BceAI	ACGGC	1 cut(s)	574
BcgI	CGANNNNNNTGC	2 cut(s)	517, 551
BfaI	CTAG	1 cut(s)	173
BfrI	CTTAAG	1 cut(s)	269
BisI	GCNGC	3 cut(s)	181, 191, 529
BlsI	GCNGC	3 cut(s)	182, 192, 530
BmcAI	AGTACT	1 cut(s)	389
Bme18I	GGWCC	1 cut(s)	404
BmgT120I	GGNCC	1 cut(s)	404
BmiI	GGNNCC	1 cut(s)	325
BmsI	GCATC	2 cut(s)	345, 463
BpmI	CTGGAG	2 cut(s)	283, 486
Bsa29I	ATCGAT	1 cut(s)	99
BsaBI	GATNNNNATC	1 cut(s)	335
BsaHI	GRCGYC	1 cut(s)	318
BsaJI	CCNNGG	5 cut(s)	57, 148, 154, 181, 497
Bsc4I	CCNNNNNNNGG	1 cut(s)	354
Bse1I	ACTGG	3 cut(s)	266, 340, 356
Bse8I	GATNNNNATC	1 cut(s)	335
BseCI	ATCGAT	1 cut(s)	99
BseDI	CCNNGG	5 cut(s)	57, 148, 154, 181, 497
BseGI	GGATG	3 cut(s)	144, 336, 478
BseJI	GATNNNNATC	1 cut(s)	335
BseLI	CCNNNNNNNGG	1 cut(s)	354
BseNI	ACTGG	3 cut(s)	266, 340, 356
BseXI	GCAGC	2 cut(s)	202, 540
BsgI	GTGCAG	1 cut(s)	233
Bsh1236I	CGCG	2 cut(s)	59, 183
BshFI	GGCC	4 cut(s)	68, 153, 165, 180
BshVI	ATCGAT	1 cut(s)	99
BslI	CCNNNNNNNGG	1 cut(s)	354
BsmI	GAATGC	1 cut(s)	240
BsnI	GGCC	4 cut(s)	68, 153, 165, 180
Bsp143I	GATC	2 cut(s)	330, 453
BspACI	CCGC	7 cut(s)	57, 59, 86, 159, 181, 183, 355
BspANI	GGCC	4 cut(s)	68, 153, 165, 180
BspDI	ATCGAT	1 cut(s)	99
BspFNI	CGCG	2 cut(s)	59, 183
BspLI	GGNNCC	1 cut(s)	325
BspTI	CTTAAG	1 cut(s)	269
BsrI	ACTGG	3 cut(s)	266, 340, 356
BssECI	CCNNGG	5 cut(s)	57, 148, 154, 181, 497
BssMI	GATC	2 cut(s)	330, 453
BssNI	GRCGYC	1 cut(s)	318
BssSI	CACGAG	1 cut(s)	374
Bst2BI	CACGAG	1 cut(s)	374
Bst6I	CTCTTC	1 cut(s)	434
BstACI	GRCGYC	1 cut(s)	318
BstAFI	CTTAAG	1 cut(s)	269
BstAPI	GCANNNNNTGC	1 cut(s)	83
BstC8I	GCNNGC	1 cut(s)	178
BstDEI	CTNAG	1 cut(s)	30
BstDSI	CCRYGG	3 cut(s)	57, 148, 181
BstF5I	GGATG	3 cut(s)	144, 336, 478
BstFNI	CGCG	2 cut(s)	59, 183
BstKTI	GATC	2 cut(s)	333, 456
BstMBI	GATC	2 cut(s)	330, 453
BstMWI	GCNNNNNNNGC	5 cut(s)	56, 65, 74, 83, 513
BstUI	CGCG	2 cut(s)	59, 183
BstV1I	GCAGC	2 cut(s)	202, 540
Bsu15I	ATCGAT	1 cut(s)	99
BsuRI	GGCC	4 cut(s)	68, 153, 165, 180
BsuTUI	ATCGAT	1 cut(s)	99
BtgI	CCRYGG	3 cut(s)	57, 148, 181
BtgZI	GCGATG	1 cut(s)	546
BtsCI	GGATG	3 cut(s)	144, 336, 478
Cac8I	GCNNGC	1 cut(s)	178
Cfr13I	GGNCC	1 cut(s)	404
Cfr42I	CCGCGG	2 cut(s)	60, 184
ClaI	ATCGAT	1 cut(s)	99
Csp6I	GTAC	1 cut(s)	388
CviAII	CATG	3 cut(s)	22, 112, 195
CviQI	GTAC	1 cut(s)	388
DdeI	CTNAG	1 cut(s)	30
DpnI	GATC	2 cut(s)	332, 455
DpnII	GATC	2 cut(s)	330, 453
EaeI	YGGCCR	1 cut(s)	151
Eam1104I	CTCTTC	1 cut(s)	434
EarI	CTCTTC	1 cut(s)	434
EciI	GGCGGA	1 cut(s)	174
Eco147I	AGGCCT	1 cut(s)	165
Eco32I	GATATC	1 cut(s)	208
Eco47I	GGWCC	1 cut(s)	404
Eco57I	CTGAAG	1 cut(s)	207
EcoRV	GATATC	1 cut(s)	208
FaeI	CATG	3 cut(s)	25, 115, 198
FaiI	YATR	8 cut(s)	23, 79, 81, 113, 196, 548, 602, 644
FalI	AAGNNNNNCTT	8 cut(s)	23, 55, 374, 406, 431, 463, 578, 610
FatI	CATG	3 cut(s)	21, 111, 194
FauI	CCCGC	1 cut(s)	348
FauNDI	CATATG	1 cut(s)	79
FblI	GTMKAC	1 cut(s)	93
Fnu4HI	GCNGC	3 cut(s)	181, 191, 529
FokI	GGATG	3 cut(s)	131, 323, 485
Fsp4HI	GCNGC	3 cut(s)	181, 191, 529
FspBI	CTAG	1 cut(s)	173
GluI	GCNGC	3 cut(s)	181, 191, 529
GsuI	CTGGAG	2 cut(s)	283, 486
HaeIII	GGCC	4 cut(s)	68, 153, 165, 180
Hin1I	GRCGYC	1 cut(s)	318
Hin1II	CATG	3 cut(s)	25, 115, 198
HincII	GTYRAC	1 cut(s)	345
HindII	GTYRAC	1 cut(s)	345
HinfI	GANTC	6 cut(s)	25, 169, 218, 290, 431, 509
HphI	GGTGA	1 cut(s)	374
Hpy166II	GTNNAC	2 cut(s)	94, 345
Hpy188I	TCNGA	4 cut(s)	226, 323, 425, 501
Hpy188III	TCNNGA	5 cut(s)	287, 451, 457, 465, 538
Hpy8I	GTNNAC	2 cut(s)	94, 345
Hpy99I	CGWCG	2 cut(s)	323, 570
HpyAV	CCTTC	1 cut(s)	410
HpyCH4IV	ACGT	2 cut(s)	132, 318
HpyCH4V	TGCA	3 cut(s)	214, 336, 528
HpyF10VI	GCNNNNNNNGC	5 cut(s)	56, 65, 74, 83, 513
HpyF3I	CTNAG	1 cut(s)	30
HpySE526I	ACGT	2 cut(s)	132, 318
Hsp92I	GRCGYC	1 cut(s)	318
Hsp92II	CATG	3 cut(s)	25, 115, 198
KspI	CCGCGG	2 cut(s)	60, 184
Kzo9I	GATC	2 cut(s)	330, 453
LmnI	GCTCC	1 cut(s)	323
Lsp1109I	GCAGC	2 cut(s)	202, 540
LweI	GCATC	2 cut(s)	345, 463
MaeI	CTAG	1 cut(s)	173
MaeII	ACGT	2 cut(s)	132, 318
MaeIII	GTNAC	2 cut(s)	125, 619
MalI	GATC	2 cut(s)	332, 455
MboI	GATC	2 cut(s)	330, 453
MboII	GAAGA	3 cut(s)	213, 439, 451
MluCI	AATT	1 cut(s)	251
MlyI	GAGTC	2 cut(s)	163, 503
MmeI	TCCRAC	1 cut(s)	301
MnlI	CCTC	9 cut(s)	79, 149, 155, 229, 258, 311, 372, 463, 507
MroXI	GAANNNNTTC	1 cut(s)	443
MseI	TTAA	3 cut(s)	53, 270, 578
MspA1I	CMGCKG	2 cut(s)	59, 183
MspCI	CTTAAG	1 cut(s)	269
Mva1269I	GAATGC	1 cut(s)	240
MvnI	CGCG	2 cut(s)	59, 183
MwoI	GCNNNNNNNGC	5 cut(s)	56, 65, 74, 83, 513
NdeI	CATATG	1 cut(s)	79
NdeII	GATC	2 cut(s)	330, 453
NlaIII	CATG	3 cut(s)	25, 115, 198
NlaIV	GGNNCC	1 cut(s)	325
NmeAIII	GCCGAG	1 cut(s)	179
NmuCI	GTSAC	1 cut(s)	619
PceI	AGGCCT	1 cut(s)	165
PcsI	WCGNNNNNNNCGW	1 cut(s)	315
PctI	GAATGC	1 cut(s)	240
PdmI	GAANNNNTTC	1 cut(s)	443
PfeI	GAWTC	4 cut(s)	25, 218, 290, 431
PkrI	GCNGC	3 cut(s)	182, 192, 530
PleI	GAGTC	2 cut(s)	163, 503
PpsI	GAGTC	2 cut(s)	163, 503
PspN4I	GGNNCC	1 cut(s)	325
PspPI	GGNCC	1 cut(s)	404
RsaI	GTAC	1 cut(s)	389
RsaNI	GTAC	1 cut(s)	388
SacII	CCGCGG	2 cut(s)	60, 184
SaqAI	TTAA	3 cut(s)	53, 270, 578
SatI	GCNGC	3 cut(s)	181, 191, 529
Sau3AI	GATC	2 cut(s)	330, 453
Sau96I	GGNCC	1 cut(s)	404
ScaI	AGTACT	1 cut(s)	389
SchI	GAGTC	2 cut(s)	163, 503
SetI	ASST	6 cut(s)	135, 276, 303, 321, 350, 616
SfaNI	GCATC	2 cut(s)	345, 463
Sfr303I	CCGCGG	2 cut(s)	60, 184
SgrBI	CCGCGG	2 cut(s)	60, 184
SinI	GGWCC	1 cut(s)	404
SmlI	CTYRAG	1 cut(s)	269
SmoI	CTYRAG	1 cut(s)	269
Sse9I	AATT	1 cut(s)	251
SseBI	AGGCCT	1 cut(s)	165
SsiI	CCGC	7 cut(s)	57, 59, 86, 159, 181, 183, 355
SspMI	CTAG	1 cut(s)	173
StuI	AGGCCT	1 cut(s)	165
TaiI	ACGT	2 cut(s)	135, 321
TaqI	TCGA	3 cut(s)	99, 309, 456
TaqII	GACCGA	1 cut(s)	638
TasI	AATT	1 cut(s)	251
TatI	WGTACW	1 cut(s)	387
TauI	GCSGC	1 cut(s)	183
TfiI	GAWTC	4 cut(s)	25, 218, 290, 431
Tru1I	TTAA	3 cut(s)	53, 270, 578
Tru9I	TTAA	3 cut(s)	53, 270, 578
TseFI	GTSAC	1 cut(s)	619
TseI	GCWGC	2 cut(s)	190, 528
Tsp45I	GTSAC	1 cut(s)	619
TspDTI	ATGAA	3 cut(s)	38, 535, 567
TspGWI	ACGGA	1 cut(s)	137
Vha464I	CTTAAG	1 cut(s)	269
VpaK11BI	GGWCC	1 cut(s)	404
XapI	RAATTY	1 cut(s)	251
XmiI	GTMKAC	1 cut(s)	93
XmnI	GAANNNNTTC	1 cut(s)	443
XspI	CTAG	1 cut(s)	173
ZraI	GACGTC	1 cut(s)	319
ZrmI	AGTACT	1 cut(s)	389

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.