Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0003122

Physical Location & Seq

Genomic Coordinates Reverse (-)

8892260 .. 8893259

Gene Structure 1000 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G155200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 633 bp

ATGATGTCCATGAAGTTGATTGGAAGCCTCAGCTGCTGCATATGGCTAGTCATGGCCATAGCCACCGTAGCTCAAACATCCGATGACTCGAATGCTCCGGTGCTTGACACTTCCGGTCAGGCTCTTCAAGCCGGTGTAGATTACTACATCAAACCCGCCATTACTGACAGTGGCGGTCGTTTCACTTTGATCGACAGAAATGACTCATGTCCATTGTATGTCGGTCAAGAAAACGTCTCAGGCCCAAAGGGCCTCCCTGTGACGTTTGCTCCTTTTGCAGAGGGAGAAACTGTGGTGAGGGAGACAAGGGACCAAAAGATCACATTCTCAGCATCCACAATCTGTGTGCAGTCAACTGCATGGAAGTTGGGTGAGATTGATCAAGTCACCCAAAGGAGATTGATTGTCGCCGGAGTAGATCAAAACCAAGGCATCGCTGGTCCGGCTCGAAACTACTTTAGGATTAACAAGCAGGCAGCTCTAGATGGTGTCTACAATCTGCAATGGTGCCCAACTGAACTGTGCCCTACTTGCAGGTTTTTATGTGGGTCTGTTGGAGCTCTTGTGGAGAATGGGAAGAGGTTGCTTGCCTTGGATGGTTCTGTGCTTCCTGTTGTGTTTGAGAGGGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0004857 GO:0004866 GO:0004867 GO:0008150 GO:0009892 GO:0010466 GO:0010605 GO:0010951 GO:0015066 GO:0019222 GO:0030162 GO:0030234 GO:0030414 GO:0031323 GO:0031324 GO:0032268 GO:0032269 GO:0043086 GO:0044092 GO:0045861 GO:0048519 GO:0048523 GO:0050789 GO:0050790 GO:0050794 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051336 GO:0051346 GO:0052547 GO:0052548 GO:0060255 GO:0061134 GO:0061135 GO:0065007 GO:0065009 GO:0080090 GO:0098772

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kunitz_legume

Protein Analysis

211

Amino Acids

22.63

Weight (kDa)

5.2

Isoelectric Point (pI)

37.52

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003122)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G73260
fragaria_vesca	FvH4_3g17480 FvH4_3g17480 FvH4_3g17790
malus_domestica	MD03G1251400.v1.1 MD11G1269300.v1.1 MD11G1269400.v1.1
prunus_persica	Prupe.4G155200_v2.0.a1
pyrus_communis	pycom03g19880 pycom03g19890
rosa_chinensis	RchiOBHm_Chr5g0029031 RchiOBHm_Chr5g0029081
rosa_laevigata	RLG00000033135 RLG00000033138 RLG00000033181
rosa_multiflora	Rmu_co8286077.1_g000001 Rmu_sc0001608.1_g000003 Rmu_sc0004324.1_g000002 Rmu_sc0010962.1_g000005 Rmu_sc0026501.1_g000002
rosa_roxburghii	Rroxscaffold_1G00050360
rosa_rugosa	Rorug05G0112300 Rorug05G0112400
rosa_samantha	Rh5AG204500 Rh5AG204600 Rh5AG207300 Rh5BG202800 Rh5BG203000 Rh5BG206100 Rh5CG224100 Rh5CG228200 Rh5DG206700 Rh5DG206800 Rh5DG209800
rosa_wichuraiana	Rw5G018540 Rw5G018560 Rw5G018860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	525
AccB1I	GGYRCC	1 cut(s)	507
AccI	GTMKAC	1 cut(s)	492
AciI	CCGC	2 cut(s)	156, 174
AcoI	YGGCCR	1 cut(s)	54
AgsI	TTSAA	1 cut(s)	128
AluBI	AGCT	4 cut(s)	33, 71, 479, 560
AluI	AGCT	4 cut(s)	33, 71, 479, 560
Alw21I	GWGCWC	1 cut(s)	562
Alw26I	GTCTC	2 cut(s)	241, 296
AlwNI	CAGNNNCTG	1 cut(s)	36
AoxI	GGCC	3 cut(s)	54, 241, 250
ApeKI	GCWGC	3 cut(s)	33, 36, 476
AspS9I	GGNCC	4 cut(s)	242, 250, 310, 440
AsuHPI	GGTGA	3 cut(s)	307, 379, 383
AvaII	GGWCC	2 cut(s)	310, 440
BaeGI	GKGCMC	2 cut(s)	512, 527
BalI	TGGCCA	1 cut(s)	56
BanI	GGYRCC	1 cut(s)	507
BanII	GRGCYC	1 cut(s)	562
Bbv12I	GWGCWC	1 cut(s)	562
BbvCI	CCTCAGC	1 cut(s)	29
BbvI	GCAGC	3 cut(s)	20, 23, 488
BccI	CCATC	2 cut(s)	479, 590
BclI	TGATCA	1 cut(s)	379
BcoDI	GTCTC	2 cut(s)	241, 296
BfaI	CTAG	2 cut(s)	47, 482
BfuAI	ACCTGC	1 cut(s)	525
BglI	GCCNNNNNGGC	1 cut(s)	249
BisI	GCNGC	3 cut(s)	34, 37, 477
BlsI	GCNGC	3 cut(s)	35, 38, 478
Bme18I	GGWCC	2 cut(s)	310, 440
BmgT120I	GGNCC	4 cut(s)	242, 250, 310, 440
BmiI	GGNNCC	2 cut(s)	311, 509
BmsI	GCATC	2 cut(s)	341, 441
BoxI	GACNNNNGTC	1 cut(s)	207
Bpu10I	CCTNAGC	1 cut(s)	29
BsaJI	CCNNGG	2 cut(s)	427, 591
BsaWI	WCCGGW	2 cut(s)	97, 113
BsaXI	ACNNNNNCTCC	6 cut(s)	253, 276, 283, 306, 549, 579
Bse118I	RCCGGY	1 cut(s)	131
Bse3DI	GCAATG	1 cut(s)	509
BseDI	CCNNGG	2 cut(s)	427, 591
BseGI	GGATG	3 cut(s)	77, 332, 601
BseMI	GCAATG	1 cut(s)	509
BseMII	CTCAG	3 cut(s)	43, 252, 342
BseSI	GKGCMC	2 cut(s)	512, 527
BseXI	GCAGC	3 cut(s)	20, 23, 488
BsgI	GTGCAG	1 cut(s)	368
Bsh1285I	CGRYCG	1 cut(s)	178
BshFI	GGCC	3 cut(s)	56, 243, 252
BshNI	GGYRCC	1 cut(s)	507
BsiEI	CGRYCG	1 cut(s)	178
BsiHKAI	GWGCWC	1 cut(s)	562
BsiSI	CCGG	5 cut(s)	98, 114, 132, 411, 443
BslFI	GGGAC	1 cut(s)	323
BsmAI	GTCTC	2 cut(s)	241, 296
BsmBI	CGTCTC	1 cut(s)	241
BsmFI	GGGAC	1 cut(s)	323
BsmI	GAATGC	1 cut(s)	97
BsnI	GGCC	3 cut(s)	56, 243, 252
Bsp1286I	GDGCHC	3 cut(s)	512, 527, 562
Bsp143I	GATC	4 cut(s)	189, 318, 379, 418
BspACI	CCGC	2 cut(s)	156, 174
BspANI	GGCC	3 cut(s)	56, 243, 252
BspCNI	CTCAG	3 cut(s)	42, 251, 341
BspLI	GGNNCC	2 cut(s)	311, 509
BspMI	ACCTGC	1 cut(s)	525
BspQI	GCTCTTC	1 cut(s)	129
BspT107I	GGYRCC	1 cut(s)	507
BsrDI	GCAATG	1 cut(s)	509
BsrFI	RCCGGY	1 cut(s)	131
BssAI	RCCGGY	1 cut(s)	131
BssECI	CCNNGG	2 cut(s)	427, 591
BssMI	GATC	4 cut(s)	189, 318, 379, 418
BssT1I	CCWWGG	2 cut(s)	427, 591
Bst4CI	ACNGT	4 cut(s)	67, 170, 292, 522
Bst6I	CTCTTC	2 cut(s)	129, 572
BstC8I	GCNNGC	2 cut(s)	474, 588
BstDEI	CTNAG	3 cut(s)	29, 238, 328
BstF5I	GGATG	3 cut(s)	77, 332, 601
BstKTI	GATC	4 cut(s)	192, 321, 382, 421
BstMAI	GTCTC	2 cut(s)	241, 296
BstMBI	GATC	4 cut(s)	189, 318, 379, 418
BstMCI	CGRYCG	1 cut(s)	178
BstMWI	GCNNNNNNNGC	7 cut(s)	33, 68, 128, 249, 275, 443, 531
BstPAI	GACNNNNGTC	1 cut(s)	207
BstSLI	GKGCMC	2 cut(s)	512, 527
BstV1I	GCAGC	3 cut(s)	20, 23, 488
BsuRI	GGCC	3 cut(s)	56, 243, 252
BtgZI	GCGATG	1 cut(s)	418
BtsCI	GGATG	3 cut(s)	77, 332, 601
BtsIMutI	CAGTG	1 cut(s)	175
BveI	ACCTGC	1 cut(s)	525
Cac8I	GCNNGC	2 cut(s)	474, 588
CaiI	CAGNNNCTG	1 cut(s)	36
Cfr10I	RCCGGY	1 cut(s)	131
Cfr13I	GGNCC	4 cut(s)	242, 250, 310, 440
CviAII	CATG	4 cut(s)	10, 52, 207, 360
DdeI	CTNAG	3 cut(s)	29, 238, 328
DpnI	GATC	4 cut(s)	191, 320, 381, 420
DpnII	GATC	4 cut(s)	189, 318, 379, 418
EaeI	YGGCCR	1 cut(s)	54
Eam1104I	CTCTTC	2 cut(s)	129, 572
EarI	CTCTTC	2 cut(s)	129, 572
Ecl136II	GAGCTC	1 cut(s)	560
Eco130I	CCWWGG	2 cut(s)	427, 591
Eco24I	GRGCYC	1 cut(s)	562
Eco47I	GGWCC	2 cut(s)	310, 440
Eco53kI	GAGCTC	1 cut(s)	560
EcoICRI	GAGCTC	1 cut(s)	560
EcoO109I	RGGNCCY	1 cut(s)	250
EcoT14I	CCWWGG	2 cut(s)	427, 591
EcoT38I	GRGCYC	1 cut(s)	562
ErhI	CCWWGG	2 cut(s)	427, 591
Esp3I	CGTCTC	1 cut(s)	241
FaeI	CATG	4 cut(s)	13, 55, 210, 363
FaiI	YATR	9 cut(s)	11, 41, 43, 53, 59, 208, 219, 361, 544
FaqI	GGGAC	1 cut(s)	323
FatI	CATG	4 cut(s)	9, 51, 206, 359
FauI	CCCGC	1 cut(s)	163
FauNDI	CATATG	1 cut(s)	41
FbaI	TGATCA	1 cut(s)	379
FblI	GTMKAC	1 cut(s)	492
Fnu4HI	GCNGC	3 cut(s)	34, 37, 477
FokI	GGATG	3 cut(s)	64, 319, 608
FriOI	GRGCYC	1 cut(s)	562
Fsp4HI	GCNGC	3 cut(s)	34, 37, 477
FspBI	CTAG	2 cut(s)	47, 482
GluI	GCNGC	3 cut(s)	34, 37, 477
HaeIII	GGCC	3 cut(s)	56, 243, 252
HapII	CCGG	5 cut(s)	98, 114, 132, 411, 443
Hin1II	CATG	4 cut(s)	13, 55, 210, 363
HincII	GTYRAC	1 cut(s)	354
HindII	GTYRAC	1 cut(s)	354
HinfI	GANTC	2 cut(s)	86, 203
HpaII	CCGG	5 cut(s)	98, 114, 132, 411, 443
HphI	GGTGA	3 cut(s)	307, 379, 383
Hpy166II	GTNNAC	2 cut(s)	354, 493
Hpy188I	TCNGA	1 cut(s)	82
Hpy188III	TCNNGA	2 cut(s)	227, 482
Hpy8I	GTNNAC	2 cut(s)	354, 493
HpyCH4III	ACNGT	4 cut(s)	67, 170, 292, 522
HpyCH4IV	ACGT	2 cut(s)	234, 263
HpyCH4V	TGCA	6 cut(s)	39, 278, 349, 359, 502, 534
HpyF10VI	GCNNNNNNNGC	7 cut(s)	33, 68, 128, 249, 275, 443, 531
HpyF3I	CTNAG	3 cut(s)	29, 238, 328
HpySE526I	ACGT	2 cut(s)	234, 263
Hsp92II	CATG	4 cut(s)	13, 55, 210, 363
Ksp22I	TGATCA	1 cut(s)	379
Kzo9I	GATC	4 cut(s)	189, 318, 379, 418
LguI	GCTCTTC	1 cut(s)	129
LmnI	GCTCC	3 cut(s)	100, 274, 557
Lsp1109I	GCAGC	3 cut(s)	20, 23, 488
LweI	GCATC	2 cut(s)	341, 441
MaeI	CTAG	2 cut(s)	47, 482
MaeII	ACGT	2 cut(s)	234, 263
MaeIII	GTNAC	2 cut(s)	259, 385
MalI	GATC	4 cut(s)	191, 320, 381, 420
MboI	GATC	4 cut(s)	189, 318, 379, 418
MboII	GAAGA	2 cut(s)	116, 589
MhlI	GDGCHC	3 cut(s)	512, 527, 562
MlsI	TGGCCA	1 cut(s)	56
MluNI	TGGCCA	1 cut(s)	56
MlyI	GAGTC	2 cut(s)	80, 197
MmeI	TCCRAC	1 cut(s)	535
MnlI	CCTC	6 cut(s)	38, 263, 274, 291, 573, 618
Mox20I	TGGCCA	1 cut(s)	56
MscI	TGGCCA	1 cut(s)	56
MseI	TTAA	2 cut(s)	465, 631
Msp20I	TGGCCA	1 cut(s)	56
MspA1I	CMGCKG	1 cut(s)	33
MspI	CCGG	5 cut(s)	98, 114, 132, 411, 443
Mva1269I	GAATGC	1 cut(s)	97
MwoI	GCNNNNNNNGC	7 cut(s)	33, 68, 128, 249, 275, 443, 531
NdeI	CATATG	1 cut(s)	41
NdeII	GATC	4 cut(s)	189, 318, 379, 418
NlaIII	CATG	4 cut(s)	13, 55, 210, 363
NlaIV	GGNNCC	2 cut(s)	311, 509
NmuCI	GTSAC	2 cut(s)	259, 385
PciSI	GCTCTTC	1 cut(s)	129
PctI	GAATGC	1 cut(s)	97
PkrI	GCNGC	3 cut(s)	35, 38, 478
PleI	GAGTC	2 cut(s)	80, 197
PpsI	GAGTC	2 cut(s)	80, 197
PshAI	GACNNNNGTC	1 cut(s)	207
Psp124BI	GAGCTC	1 cut(s)	562
PspN4I	GGNNCC	2 cut(s)	311, 509
PspPI	GGNCC	4 cut(s)	242, 250, 310, 440
PstNI	CAGNNNCTG	1 cut(s)	36
PvuII	CAGCTG	1 cut(s)	33
SacI	GAGCTC	1 cut(s)	562
SapI	GCTCTTC	1 cut(s)	129
SaqAI	TTAA	2 cut(s)	465, 631
SatI	GCNGC	3 cut(s)	34, 37, 477
Sau3AI	GATC	4 cut(s)	189, 318, 379, 418
Sau96I	GGNCC	4 cut(s)	242, 250, 310, 440
SchI	GAGTC	2 cut(s)	80, 197
SduI	GDGCHC	3 cut(s)	512, 527, 562
SetI	ASST	8 cut(s)	35, 73, 237, 266, 481, 539, 562, 584
SfaNI	GCATC	2 cut(s)	341, 441
SfiI	GGCCNNNNNGGCC	1 cut(s)	249
SinI	GGWCC	2 cut(s)	310, 440
SsiI	CCGC	2 cut(s)	156, 174
SspMI	CTAG	2 cut(s)	47, 482
SstI	GAGCTC	1 cut(s)	562
StyI	CCWWGG	2 cut(s)	427, 591
TaaI	ACNGT	4 cut(s)	67, 170, 292, 522
TaiI	ACGT	2 cut(s)	237, 266
TaqI	TCGA	3 cut(s)	89, 192, 448
TaqII	GACCGA	1 cut(s)	212
Tru1I	TTAA	2 cut(s)	465, 631
Tru9I	TTAA	2 cut(s)	465, 631
TscAI	CASTG	1 cut(s)	175
TseFI	GTSAC	2 cut(s)	259, 385
TseI	GCWGC	3 cut(s)	33, 36, 476
Tsp45I	GTSAC	2 cut(s)	259, 385
TspDTI	ATGAA	1 cut(s)	26
TspRI	CASTG	1 cut(s)	175
VpaK11BI	GGWCC	2 cut(s)	310, 440
XbaI	TCTAGA	1 cut(s)	481
XcmI	CCANNNNNNNNNTGG	1 cut(s)	434
XmiI	GTMKAC	1 cut(s)	492
XspI	CTAG	2 cut(s)	47, 482

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.