Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000983

Physical Location & Seq

Genomic Coordinates Reverse (-)

30260818 .. 30267125

Gene Structure 6308 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G80490.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3360 bp

ATGTCTTCTCTGAGCAGAGAGCTCGTCTTCTTGATCTTACAGTTTTTAGATGAAGAGAAGTTTAAAGAGACTGTTCATAAGCTTGAACAAGAATCTGGGTTTTTCTTCAATATGAAGTATTTTGAGGATGAGGTGCACAATGGTAACTGGGATGAGGTTGAGAAGTATCTCTCTGGTTTTACTAAAGTTGATGATAATCGATACTCCATGAAGATTTTCTTCGAGATTAGGAAGCAGAAGTATCTCGAGGCCTTGGATAGGCATGATCGTCCCAAGGCTGTCGATATTTTAGTCAAAGATTTGAAAGTGTTTTCCACTTTTAATGAGGAGCTTTTCAAGGAAATCACTCAGCTCTTGACCTTAGAAAACTTCAGGGAGAACGAGCAGTTATCCAAGTATGGGGACACAAAGTCCGCCAGAGCTATCATGTTGGTGGAACTCAAGAAGTTGATTGAAGCTAATCCTTTATTCCGTGATAAATTGCAGTTTCCTACCCTTAGAACTTCACGCCTCAGGACTCTGATTAATCAGAGCTTAAATTGGCAACACCAGCTTTGTAAGAACCCAAGGCCTAATCCTGATATTAAGACTCTCTTTGTCGATCATTCCTGCCGCCTACCAAATGATGCACGAGCACCATCCCCTGTCAACAATCCGCTTCTTGGATCATTACCAAAAGCCGAGGGATTTCCTCCTCTAGGCGCACACGGGCCTTTTCAACCAACACCTTCTCCGGTTCCGACACCTCTTGCTGGTTGGATGTCTAGTCCTTCCTCTGTCCCACATCCAGCTGTGTCTGGAGGACCCATTGCTCTTGGTGCTCCATCCATCCAAGCCTTGAAACACCCGAGAACTCCTCCTTCTAATTCCGCTGTAGACTATCCATCAGGTGACTCAGACCATGTCTCAAAGCGAACCAGACCTATGGGAATCTCTGACGAGGTGAGTCTAGGTGTGAACATGTTACCAATGACATTCCCGGGGCAGGCTCATGGTCATAATCAAACCTTCAAAGCACCTGATGACTTGCCCAAGACAGTTGCACGAACTTTGAGCCAAGGCTCATCTCCCATGAGCATGGATTTCCATCCTATTAAACAGACTCTGCTACTAGTTGGTACGAATGTAGGGGATATTGGGCTCTGGGAAGTCGGTTCTCGAGAACGTCTAGTCCAGAAGACTTTCAAAGTTTGGGACTTGAGTAAATGTTCGATGCCCTTGCAGGCTGCTTTGGTGAAAGAACCTGTCGTTTCTGTCAACCGTGTGATTTGGAGCCCGGACGGTTCCCTATTCGGAGTTGCTTATTCGAGACATATTGTACAGCTATACTCTTATCACGGTGGTGAAGACATGAGGCAACACCTTGAGATTGATGCTCATGTTGGCGGTGTCAATGACATTGCATTTTCCACTCCGAACAAGCAACTATGTGTTACTACTTGTGGTGATGACAAAACCATCAAGGTCTGGGATGCTGCAACGGGTGTAAAACGGTATACTTTTGAAGGCCATGAAGCTCCTGTTTACTCTATCTGCCCTCACTACAAGGAAAACATTCAGTTTATCTTTTCAACTGCTCTTGACGGAAAAATAAAAGCATGGTTATATGATAATATGGGTTCTCGGGTTGACTACGAAGCTCCTGGTCGCTGGTGTACAACGATGGCCTACAGTGCTGATGGAACTAGGCTATTTTCTTGTGGGACGAGTAAAGATGGGGAATCGTTCATAGTTGAGTGGAATGAAAGCGAAGGAGCTGTGAAGAGAACTTATCAAGGATTCCACAAGCGTTCCCTTGGTGTTGTCCAGTTTGATACTACTAAAAACCGTTATCTCGCTGCGGGTGACGACTTCTCCATTAAGTTCTGGGATATGGACACCATACAGCTTTTGACTGCCATTGATGCTGATGGAGGTCTCCAGGCAAGTCCACGGATCAGATTTAACAAGGAAGGCTCTCTCTTGGCTGTTTCCGCAAATGACAATATGATTAAGGTTATGGCAAACTCAGATGGTCTAAGGCTATTGCACACAGTCGAGAACTTATCTTCTGAATCCTCCAAGCCTGCAATCAACAGCATTCCGATGGTAGAGAGACCTGCCTCTGTCGTTTCCATCCCTGGAATGAATGGAGATTCGCGGAATATGGTGGATGTGAAGCCAGTGATTACCGAAGAATCAAATGATAAGTCTAAGGTATGGAAGCTTACTGAAGTCGGCGAACCCTCTCAGTGCCGTTCATTGAGACTCCCTGAGAATATGAGAGTCACCAAGATATCGAGATTGATTTTCACAAATTCGGGAAATGCAATTTTGGCATTGGCATCAAATGCTATTCATCTGCTATGGAAGTGGCAGCGAAATGACCGTAATGCAACTGGGAAGGCAACGGCTTCTTTACCTCCTCAGCAGTGGCAACCAGCGAGCGGGATCTTAATGACAAACGATGTGGCTGAAACTAATCCAGAAGAAGCCGTACCCTGTTTTGCTTTATCGAAAAATGATTCCTACGTGATGTCAGCATCGGGAGGAAAGATCTCTTTGTTTAATATGATGACGTTTAAGACAATGGCTACTTTCATGCCGCCTCCTCCTGCCGCAACGTTTCTTGCTTTTCACCCTCAAGATAACAATATCATTGCGATCGGGATGGATGACAGTACAATACAGATTTACAATGTTCGTGTTGATGAGGTTAAGAGCAAGCTTAAAGGACATTCTAAGAGAATAACCGGCCTCGCTTTCTCCAATGTATTAAACGTTCTGGTTTCGTCTGGAGCAGACGCTCAGCTTTGCGTATGGAACACGGATGGATGGGAGAAGCAGAAAAGCAAGGTTCTGCAAATTCCACAGGGAAGATCCACGTCTTCTTTGTCAGACACGCGTGTTCAGTTTCATCAAGATCAAGTACACTTCCTTGTGGTCCATGAAACTCAGCTCGCTATATACGAAACAACCAAGCTTGAATGCATGAAACAGTGGCCTGTGCGTGAATCAGCAGCTCCAATAACACATGCCACATTCTCATGTGATAGCCAATTGATATACACAAGTTTCATGGACGCTACAATATGCGTCTTCAGCTCTGCAAACCTTCGATTGCGTTGCAGAGTCAATCCCTCTGCATATTTGCCAGCTTCTCTCAGCAACTCGAATGTCCATCCACTGGTGATAGCGGCTCATCCGCAAGAATCCAACATGTTTGCAGTGGGTCTGTCAGACGGAGGGGTCCATATATTCGAGCCGCTTGAGTCAGAAGGTAAATGGGGAGTAGCTCCACCGCCTGAAAATGGCTCAGCCAGCGCTGTCACGGCTACACCTTCCGTTGGAGCTTCTGCCTCTGACCAGCCTCAGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003002 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009753 GO:0009755 GO:0009790 GO:0009791 GO:0009793 GO:0009867 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009933 GO:0009987 GO:0010014 GO:0010016 GO:0010033 GO:0010051 GO:0010072 GO:0010154 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0019219 GO:0019222 GO:0022414 GO:0023052 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032501 GO:0032502 GO:0032870 GO:0042221 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045892 GO:0045934 GO:0046983 GO:0048316 GO:0048367 GO:0048507 GO:0048508 GO:0048519 GO:0048523 GO:0048532 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051716 GO:0060255 GO:0061458 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0080090 GO:0090421 GO:1901700 GO:1901701 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04934 map04934

Pfam Domains

Protein Families

WD40

Protein Analysis

1119

Amino Acids

124.02

Weight (kDa)

6.68

Isoelectric Point (pI)

41.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LisH_TPL	PF17814	5 - 34	6.7e-13	LisH-like dimerisation domain
TPR1-like_2nd	PF21889	37 - 161	4e-64	TPR1-like, CTLH-containing domain
zf_topless	PF21359	164 - 204	9.3e-25	TOPLESS, zinc finger domain
Beta-prop_THOC3	PF25174	393 - 512	9.2e-14	THOC3 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	395 - 571	7.8e-16	WDR3 first beta-propeller domain
Beta-prop_WDR3_2nd	PF25172	413 - 572	1.1e-08	WDR3 second beta-propeller domain
WD40_CDC20-Fz	PF24807	416 - 569	2.2e-08	CDC20/Fizzy WD40 domain
Beta-prop_THOC3	PF25174	419 - 680	1e-26	THOC3 beta-propeller domain
Beta-prop_WDR5	PF25175	419 - 586	2e-18	WDR5 beta-propeller domain
WDR55	PF24796	420 - 535	7.5e-06	WDR55
WD40_WDHD1_1st	PF24817	432 - 539	6.3e-11	WDHD1 first WD40 domain
Beta-prop_EML	PF23409	456 - 665	1.1e-07	Echinoderm microtubule-associated protein first beta-propeller
WD40_Prp19	PF24814	465 - 670	3.2e-13	Prp19 WD40 domain
Beta-prop_EML_2	PF23414	473 - 633	2.8e-07	Echinoderm microtubule-associated protein second beta-propeller
WDR55	PF24796	521 - 669	1.5e-06	WDR55
Beta-prop_WDR3_1st	PF25173	525 - 667	1.4e-08	WDR3 first beta-propeller domain
Beta-prop_WDR5	PF25175	555 - 676	3.3e-07	WDR5 beta-propeller domain
Beta-prop_WDR36-Utp21_2nd	PF25168	578 - 668	1.6e-06	WDR36/Utp21 second beta-propeller domain
Beta-prop_EML_2	PF23414	819 - 945	9.3e-11	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR36-Utp21_2nd	PF25168	821 - 938	1.9e-09	WDR36/Utp21 second beta-propeller domain
WD40_CDC20-Fz	PF24807	822 - 941	7.8e-12	CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st	PF25173	822 - 938	2.5e-15	WDR3 first beta-propeller domain
WDR55	PF24796	823 - 937	4.4e-06	WDR55
Beta-prop_WDR5	PF25175	824 - 1032	3.7e-19	WDR5 beta-propeller domain
WD40_WDHD1_1st	PF24817	824 - 1031	7.9e-18	WDHD1 first WD40 domain
WD40_Prp19	PF24814	824 - 1022	5.3e-17	Prp19 WD40 domain
Beta-prop_THOC3	PF25174	825 - 1038	4.8e-12	THOC3 beta-propeller domain
Beta-prop_WDR3_2nd	PF25172	828 - 1028	9e-14	WDR3 second beta-propeller domain
Beta-prop_IFT140_1st	PF23383	840 - 944	9.6e-09	IFT140 first beta-propeller
Beta-prop_WDR36-Utp21_1st	PF25171	841 - 938	9.1e-10	WDR36/Utp21 first beta-propeller
Beta-prop_WDR90_POC16_2nd	PF23393	845 - 949	4.9e-08	WDR90/POC16, second beta-propeller
Beta-prop_WDR19_1st	PF23389	868 - 991	3.2e-06	WDR19 first beta-propeller

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0000983)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G15750 AT1G15750 AT1G15750 AT1G15750 AT1G80490 AT1G80490 AT1G80490
fragaria_vesca	FvH4_2g28650 FvH4_6g29170 FvH4_6g29170 FvH4_6g29170 FvH4_6g29170 FvH4_6g29170 FvH4_6g29170 FvH4_6g29170 FvH4_6g29170 FvH4_6g29170 FvH4_6g29170
malus_domestica	MD08G1152000.v1.1 MD09G1222700.v1.1 MD15G1129100.v1.1 MD17G1217100.v1.1
prunus_persica	Prupe.1G484400_v2.0.a1 Prupe.1G484400_v2.0.a1 Prupe.1G484400_v2.0.a1 Prupe.1G484400_v2.0.a1 Prupe.1G484400_v2.0.a1 Prupe.3G093100_v2.0.a1 Prupe.3G093100_v2.0.a1 Prupe.3G093100_v2.0.a1 Prupe.3G093100_v2.0.a1 Prupe.3G093100_v2.0.a1
pyrus_communis	pycom08g13010 pycom15g11620 pycom17g22170 pycom808g00800
rosa_chinensis	RchiOBHm_Chr2g0134371 RchiOBHm_Chr6g0297431
rosa_laevigata	RLG00000011599 RLG00000019387
rosa_multiflora	Rmu_sc0004323.1_g000004 Rmu_ssc0000064.1_g000035
rosa_roxburghii	Rroxscaffold_2G00110290 Rroxscaffold_7G00170510
rosa_rugosa	Rorug02G0316200 Rorug02G0316300 Rorug02G0316400 Rorug02G0316500 Rorug02G0316600 Rorug06G0271900 Rorug06G0271900 Rorug06G0272000
rosa_samantha	Rh2AG368900 Rh2BG375100 Rh2CG352600 Rh2DG392200 Rh6AG383200 Rh6BG391600 Rh6CG396700 Rh6DG384000
rosa_wichuraiana	Rw2G030060 Rw6G033360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	3227
Acc36I	ACCTGC	1 cut(s)	2107
AccB7I	CCANNNNNTGG	1 cut(s)	3166
AccBSI	CCGCTC	1 cut(s)	2427
AccI	GTMKAC	2 cut(s)	876, 1496
AccII	CGCG	2 cut(s)	2140, 2884
AclI	AACGTT	2 cut(s)	2603, 2760
AclWI	GGATC	4 cut(s)	673, 1943, 2438, 2853
AcsI	RAATTY	2 cut(s)	2296, 2844
AcuI	CTGAAG	3 cut(s)	355, 2232, 3064
AfaI	GTAC	6 cut(s)	1120, 1320, 1657, 2478, 2662, 2910
AfeI	AGCGCT	1 cut(s)	3304
AflIII	ACRYGT	3 cut(s)	960, 2882, 3198
AhdI	GACNNNNNGTC	1 cut(s)	409
AhlI	ACTAGT	1 cut(s)	1111
AjiI	CACGTC	1 cut(s)	2865
AjnI	CCWGG	3 cut(s)	1642, 1920, 2119
AleI	CACNNNNGTG	1 cut(s)	1341
AloI	GAACNNNNNNTCC	2 cut(s)	1155, 1187
Alw21I	GWGCWC	4 cut(s)	24, 138, 637, 823
Alw26I	GTCTC	6 cut(s)	62, 910, 1303, 1922, 2089, 2239
Alw44I	GTGCAC	1 cut(s)	134
AlwI	GGATC	4 cut(s)	673, 1943, 2438, 2853
AlwNI	CAGNNNCTG	1 cut(s)	1105
Ama87I	CYCGRG	5 cut(s)	245, 847, 979, 1158, 1623
Aor51HI	AGCGCT	1 cut(s)	3304
AoxI	GGCC	7 cut(s)	249, 569, 710, 1507, 1665, 2734, 2981
ApaLI	GTGCAC	1 cut(s)	134
ApeKI	GCWGC	5 cut(s)	1226, 1475, 1838, 2356, 2999
ApoI	RAATTY	2 cut(s)	2296, 2844
ArsI	GACNNNNNNTTYG	2 cut(s)	2174, 2206
AseI	ATTAAT	1 cut(s)	525
Asp700I	GAANNNNTTC	3 cut(s)	215, 1181, 1554
AspLEI	GCGC	2 cut(s)	704, 3305
AspS9I	GGNCC	4 cut(s)	710, 803, 2923, 3229
AsuC2I	CCSGG	3 cut(s)	980, 981, 1277
AsuHPI	GGTGA	9 cut(s)	902, 955, 1246, 1355, 1457, 1856, 2260, 2609, 3181
AvaI	CYCGRG	5 cut(s)	245, 847, 979, 1158, 1623
AvaII	GGWCC	3 cut(s)	803, 2923, 3229
AxyI	CCTNAGG	1 cut(s)	512
BaeGI	GKGCMC	1 cut(s)	138
BaeI	ACNNNNGTAYC	2 cut(s)	1110, 1143
BanII	GRGCYC	3 cut(s)	24, 1143, 1277
BarI	GAAGNNNNNNTAC	2 cut(s)	2460, 2492
BauI	CACGAG	1 cut(s)	630
BbsI	GAAGAC	5 cut(s)	19, 1184, 1353, 2859, 3070
Bbv12I	GWGCWC	4 cut(s)	24, 138, 637, 823
BbvCI	CCTCAGC	1 cut(s)	2406
BbvI	GCAGC	5 cut(s)	1213, 1462, 1825, 2368, 3011
BceAI	ACGGC	4 cut(s)	2220, 2406, 2459, 3327
BcgI	CGANNNNNNTGC	6 cut(s)	4, 38, 1201, 1235, 3087, 3121
BciT130I	CCWGG	3 cut(s)	1644, 1922, 2121
BcnI	CCSGG	3 cut(s)	980, 981, 1277
BcoDI	GTCTC	6 cut(s)	62, 910, 1303, 1922, 2089, 2239
BcuI	ACTAGT	1 cut(s)	1111
BfaI	CTAG	6 cut(s)	698, 765, 950, 1112, 1169, 1686
BfmI	CTRYAG	2 cut(s)	873, 1669
BfoI	RGCGCY	1 cut(s)	3306
BfuAI	ACCTGC	1 cut(s)	2107
BglII	AGATCT	1 cut(s)	2535
BlpI	GCTNAGC	2 cut(s)	2787, 3295
Bme1390I	CCNGG	6 cut(s)	980, 981, 1277, 1644, 1922, 2121
Bme18I	GGWCC	3 cut(s)	803, 2923, 3229
BmeRI	GACNNNNNGTC	1 cut(s)	409
BmeT110I	CYCGRG	5 cut(s)	245, 847, 979, 1158, 1623
BmgBI	CACGTC	1 cut(s)	2865
BmgT120I	GGNCC	4 cut(s)	710, 803, 2923, 3229
BmiI	GGNNCC	5 cut(s)	738, 805, 1274, 1285, 3230
BmrFI	CCNGG	6 cut(s)	980, 981, 1277, 1644, 1922, 2121
BmrI	ACTGGG	2 cut(s)	157, 2388
BmsI	GCATC	7 cut(s)	616, 1203, 1363, 1462, 1894, 2333, 2531
BmuI	ACTGGG	2 cut(s)	157, 2388
BpiI	GAAGAC	5 cut(s)	19, 1184, 1353, 2859, 3070
BplI	GAGNNNNNCTC	2 cut(s)	841, 873
BpmI	CTGGAG	3 cut(s)	819, 1904, 2796
Bpu10I	CCTNAGC	1 cut(s)	2406
Bpu1102I	GCTNAGC	2 cut(s)	2787, 3295
BpuEI	CTTGAG	5 cut(s)	425, 1219, 1385, 2607, 3269
BpuMI	CCSGG	3 cut(s)	980, 981, 1277
Bsa29I	ATCGAT	1 cut(s)	199
BsaAI	YACGTR	1 cut(s)	2512
BsaBI	GATNNNNATC	2 cut(s)	195, 1086
BsaI	GGTCTC	2 cut(s)	1922, 2089
BsaWI	WCCGGW	1 cut(s)	733
BsaXI	ACNNNNNCTCC	4 cut(s)	715, 745, 1838, 1868
Bse118I	RCCGGY	1 cut(s)	2732
Bse1I	ACTGG	5 cut(s)	152, 1807, 2162, 2383, 3171
Bse21I	CCTNAGG	1 cut(s)	512
Bse3DI	GCAATG	3 cut(s)	807, 1398, 2637
Bse8I	GATNNNNATC	2 cut(s)	195, 1086
BseBI	CCWGG	3 cut(s)	1644, 1922, 2121
BseCI	ATCGAT	1 cut(s)	199
BseJI	GATNNNNATC	2 cut(s)	195, 1086
BseMI	GCAATG	3 cut(s)	807, 1398, 2637
BseNI	ACTGG	5 cut(s)	152, 1807, 2162, 2383, 3171
BseRI	GAGGAG	5 cut(s)	341, 684, 846, 2394, 2580
BseSI	GKGCMC	1 cut(s)	138
BseXI	GCAGC	5 cut(s)	1213, 1462, 1825, 2368, 3011
Bsh1236I	CGCG	2 cut(s)	2140, 2884
Bsh1285I	CGRYCG	1 cut(s)	2646
BshFI	GGCC	7 cut(s)	251, 571, 712, 1509, 1667, 2736, 2983
BshVI	ATCGAT	1 cut(s)	199
BsiEI	CGRYCG	1 cut(s)	2646
BsiHKAI	GWGCWC	4 cut(s)	24, 138, 637, 823
BsiHKCI	CYCGRG	5 cut(s)	245, 847, 979, 1158, 1623
BsiSI	CCGG	4 cut(s)	734, 980, 1277, 2733
BslFI	GGGAC	5 cut(s)	255, 416, 764, 1208, 1717
BsmAI	GTCTC	6 cut(s)	62, 910, 1303, 1922, 2089, 2239
BsmFI	GGGAC	5 cut(s)	255, 416, 764, 1208, 1717
BsmI	GAATGC	2 cut(s)	2079, 2972
BsnI	GGCC	7 cut(s)	251, 571, 712, 1509, 1667, 2736, 2983
Bso31I	GGTCTC	2 cut(s)	1922, 2089
BsoBI	CYCGRG	5 cut(s)	245, 847, 979, 1158, 1623
Bsp1286I	GDGCHC	6 cut(s)	24, 138, 637, 823, 1143, 1277
Bsp1407I	TGTACA	2 cut(s)	1318, 1655
Bsp1720I	GCTNAGC	2 cut(s)	2787, 3295
BspANI	GGCC	7 cut(s)	251, 571, 712, 1509, 1667, 2736, 2983
BspDI	ATCGAT	1 cut(s)	199
BspFNI	CGCG	2 cut(s)	2140, 2884
BspLI	GGNNCC	5 cut(s)	738, 805, 1274, 1285, 3230
BspMI	ACCTGC	1 cut(s)	2107
BspPI	GGATC	4 cut(s)	673, 1943, 2438, 2853
BspTNI	GGTCTC	2 cut(s)	1922, 2089
BsrBI	CCGCTC	1 cut(s)	2427
BsrDI	GCAATG	3 cut(s)	807, 1398, 2637
BsrFI	RCCGGY	1 cut(s)	2732
BsrGI	TGTACA	2 cut(s)	1318, 1655
BsrI	ACTGG	5 cut(s)	152, 1807, 2162, 2383, 3171
BssAI	RCCGGY	1 cut(s)	2732
BssNAI	GTATAC	1 cut(s)	1497
BssSI	CACGAG	1 cut(s)	630
BssT1I	CCWWGG	5 cut(s)	252, 273, 566, 1057, 1795
Bst1107I	GTATAC	1 cut(s)	1497
Bst2BI	CACGAG	1 cut(s)	630
Bst2UI	CCWGG	3 cut(s)	1644, 1922, 2121
Bst6I	CTCTTC	2 cut(s)	48, 1757
BstAPI	GCANNNNNTGC	1 cut(s)	2330
BstAUI	TGTACA	2 cut(s)	1318, 1655
BstBAI	YACGTR	1 cut(s)	2512
BstC8I	GCNNGC	8 cut(s)	987, 1224, 2067, 2425, 2705, 2940, 3135, 3301
BstDSI	CCRYGG	1 cut(s)	1931
BstENI	CCTNNNNNAGG	2 cut(s)	256, 696
BstFNI	CGCG	2 cut(s)	2140, 2884
BstH2I	RGCGCY	1 cut(s)	3306
BstHHI	GCGC	2 cut(s)	704, 3305
BstMAI	GTCTC	6 cut(s)	62, 910, 1303, 1922, 2089, 2239
BstMCI	CGRYCG	1 cut(s)	2646
BstNI	CCWGG	3 cut(s)	1644, 1922, 2121
BstNSI	RCATGY	3 cut(s)	964, 3017, 3202
BstSCI	CCNGG	6 cut(s)	978, 979, 1275, 1642, 1920, 2119
BstSFI	CTRYAG	2 cut(s)	873, 1669
BstSLI	GKGCMC	1 cut(s)	138
BstUI	CGCG	2 cut(s)	2140, 2884
BstV1I	GCAGC	5 cut(s)	1213, 1462, 1825, 2368, 3011
BstV2I	GAAGAC	5 cut(s)	19, 1184, 1353, 2859, 3070
BstX2I	RGATCY	3 cut(s)	2430, 2535, 2858
BstXI	CCANNNNNNTGG	2 cut(s)	925, 1078
BstYI	RGATCY	3 cut(s)	2430, 2535, 2858
BstZ17I	GTATAC	1 cut(s)	1497
Bsu15I	ATCGAT	1 cut(s)	199
Bsu36I	CCTNAGG	1 cut(s)	512
BsuRI	GGCC	7 cut(s)	251, 571, 712, 1509, 1667, 2736, 2983
BsuTUI	ATCGAT	1 cut(s)	199
BtgI	CCRYGG	1 cut(s)	1931
BtrI	CACGTC	1 cut(s)	2865
BtsI	GCAGTG	2 cut(s)	2417, 3213
BtsIMutI	CAGTG	7 cut(s)	1678, 2169, 2237, 2417, 2984, 3164, 3213
BveI	ACCTGC	1 cut(s)	2107
Cac8I	GCNNGC	8 cut(s)	987, 1224, 2067, 2425, 2705, 2940, 3135, 3301
CaiI	CAGNNNCTG	1 cut(s)	1105
CfoI	GCGC	2 cut(s)	704, 3305
Cfr10I	RCCGGY	1 cut(s)	2732
Cfr13I	GGNCC	4 cut(s)	710, 803, 2923, 3229
Cfr9I	CCCGGG	1 cut(s)	979
ClaI	ATCGAT	1 cut(s)	199
CseI	GACGC	3 cut(s)	2792, 3064, 3071
Csp6I	GTAC	6 cut(s)	1119, 1319, 1656, 2477, 2661, 2909
CspCI	CAANNNNNGTGG	2 cut(s)	2430, 2465
CviQI	GTAC	6 cut(s)	1119, 1319, 1656, 2477, 2661, 2909
DraI	TTTAAA	1 cut(s)	64
DrdI	GACNNNNNNGTC	1 cut(s)	3227
DriI	GACNNNNNGTC	1 cut(s)	409
DseDI	GACNNNNNNGTC	1 cut(s)	3227
Eam1104I	CTCTTC	2 cut(s)	48, 1757
Eam1105I	GACNNNNNGTC	1 cut(s)	409
EarI	CTCTTC	2 cut(s)	48, 1757
EciI	GGCGGA	1 cut(s)	403
Ecl136II	GAGCTC	1 cut(s)	22
Eco130I	CCWWGG	5 cut(s)	252, 273, 566, 1057, 1795
Eco147I	AGGCCT	2 cut(s)	251, 571
Eco24I	GRGCYC	3 cut(s)	24, 1143, 1277
Eco31I	GGTCTC	2 cut(s)	1922, 2089
Eco32I	GATATC	1 cut(s)	2277
Eco47I	GGWCC	3 cut(s)	803, 2923, 3229
Eco47III	AGCGCT	1 cut(s)	3304
Eco53kI	GAGCTC	1 cut(s)	22
Eco57I	CTGAAG	3 cut(s)	355, 2232, 3064
Eco81I	CCTNAGG	1 cut(s)	512
Eco88I	CYCGRG	5 cut(s)	245, 847, 979, 1158, 1623
EcoICRI	GAGCTC	1 cut(s)	22
EcoNI	CCTNNNNNAGG	2 cut(s)	256, 696
EcoO109I	RGGNCCY	1 cut(s)	803
EcoRII	CCWGG	3 cut(s)	1642, 1920, 2119
EcoRV	GATATC	1 cut(s)	2277
EcoT14I	CCWWGG	5 cut(s)	252, 273, 566, 1057, 1795
EcoT22I	ATGCAT	1 cut(s)	2972
EcoT38I	GRGCYC	3 cut(s)	24, 1143, 1277
ErhI	CCWWGG	5 cut(s)	252, 273, 566, 1057, 1795
FalI	AAGNNNNNCTT	4 cut(s)	203, 235, 578, 610
FaqI	GGGAC	5 cut(s)	255, 416, 764, 1208, 1717
FauI	CCCGC	2 cut(s)	1834, 2420
FblI	GTMKAC	2 cut(s)	876, 1496
FriOI	GRGCYC	3 cut(s)	24, 1143, 1277
FspBI	CTAG	6 cut(s)	698, 765, 950, 1112, 1169, 1686
GlaI	GCGC	2 cut(s)	703, 3304
GsuI	CTGGAG	3 cut(s)	819, 1904, 2796
HaeII	RGCGCY	1 cut(s)	3306
HaeIII	GGCC	7 cut(s)	251, 571, 712, 1509, 1667, 2736, 2983
HapII	CCGG	4 cut(s)	734, 980, 1277, 2733
HgaI	GACGC	3 cut(s)	2792, 3064, 3071
HhaI	GCGC	2 cut(s)	704, 3305
Hin6I	GCGC	2 cut(s)	702, 3303
HinP1I	GCGC	2 cut(s)	702, 3303
HincII	GTYRAC	3 cut(s)	649, 1258, 1630
HindII	GTYRAC	3 cut(s)	649, 1258, 1630
HindIII	AAGCTT	4 cut(s)	80, 2204, 2705, 2960
HpaII	CCGG	4 cut(s)	734, 980, 1277, 2733
HphI	GGTGA	9 cut(s)	902, 955, 1246, 1355, 1457, 1856, 2260, 2609, 3181
HpyCH4IV	ACGT	6 cut(s)	1165, 2511, 2558, 2603, 2760, 2864
HpySE526I	ACGT	6 cut(s)	1165, 2511, 2558, 2603, 2760, 2864
HspAI	GCGC	2 cut(s)	702, 3303
Lsp1109I	GCAGC	5 cut(s)	1213, 1462, 1825, 2368, 3011
LweI	GCATC	7 cut(s)	616, 1203, 1363, 1462, 1894, 2333, 2531
MaeI	CTAG	6 cut(s)	698, 765, 950, 1112, 1169, 1686
MaeII	ACGT	6 cut(s)	1165, 2511, 2558, 2603, 2760, 2864
MaeIII	GTNAC	7 cut(s)	143, 890, 963, 1432, 1844, 2266, 3307
MbiI	CCGCTC	1 cut(s)	2427
MfeI	CAATTG	1 cut(s)	3038
MflI	RGATCY	3 cut(s)	2430, 2535, 2858
MhlI	GDGCHC	6 cut(s)	24, 138, 637, 823, 1143, 1277
MluCI	AATT	7 cut(s)	479, 538, 865, 2296, 2310, 2844, 3038
MluI	ACGCGT	1 cut(s)	2882
MlyI	GAGTC	9 cut(s)	511, 583, 887, 955, 1096, 2241, 2274, 3120, 3260
MmeI	TCCRAC	4 cut(s)	737, 764, 3219, 3307
Mph1103I	ATGCAT	1 cut(s)	2972
MroXI	GAANNNNTTC	3 cut(s)	215, 1181, 1554
MslI	CAYNNNNRTG	5 cut(s)	431, 1076, 1341, 2084, 3025
MspA1I	CMGCKG	2 cut(s)	791, 872
MspI	CCGG	4 cut(s)	734, 980, 1277, 2733
MspR9I	CCNGG	6 cut(s)	980, 981, 1277, 1644, 1922, 2121
MunI	CAATTG	1 cut(s)	3038
Mva1269I	GAATGC	2 cut(s)	2079, 2972
MvaI	CCWGG	3 cut(s)	1644, 1922, 2121
MvnI	CGCG	2 cut(s)	2140, 2884
NciI	CCSGG	3 cut(s)	980, 981, 1277
NlaIV	GGNNCC	5 cut(s)	738, 805, 1274, 1285, 3230
NmeAIII	GCCGAG	1 cut(s)	706
NmuCI	GTSAC	4 cut(s)	890, 1844, 2266, 3307
NsiI	ATGCAT	1 cut(s)	2972
NspI	RCATGY	3 cut(s)	964, 3017, 3202
OliI	CACNNNNGTG	1 cut(s)	1341
PaeR7I	CTCGAG	2 cut(s)	245, 1158
PceI	AGGCCT	2 cut(s)	251, 571
PciI	ACATGT	2 cut(s)	960, 3198
PcsI	WCGNNNNNNNCGW	1 cut(s)	2946
PctI	GAATGC	2 cut(s)	2079, 2972
PdmI	GAANNNNTTC	3 cut(s)	215, 1181, 1554
PflFI	GACNNNGTC	1 cut(s)	902
PflMI	CCANNNNNTGG	1 cut(s)	3166
Ple19I	CGATCG	1 cut(s)	2646
PleI	GAGTC	9 cut(s)	511, 583, 887, 954, 1096, 2241, 2273, 3119, 3259
PpsI	GAGTC	9 cut(s)	511, 583, 887, 954, 1096, 2241, 2273, 3119, 3259
Ppu21I	YACGTR	1 cut(s)	2512
PpuMI	RGGWCCY	1 cut(s)	803
PscI	ACATGT	2 cut(s)	960, 3198
PshBI	ATTAAT	1 cut(s)	525
Psp124BI	GAGCTC	1 cut(s)	24
Psp1406I	AACGTT	2 cut(s)	2603, 2760
Psp5II	RGGWCCY	1 cut(s)	803
Psp6I	CCWGG	3 cut(s)	1642, 1920, 2119
PspGI	CCWGG	3 cut(s)	1642, 1920, 2119
PspN4I	GGNNCC	5 cut(s)	738, 805, 1274, 1285, 3230
PspPI	GGNCC	4 cut(s)	710, 803, 2923, 3229
PspPPI	RGGWCCY	1 cut(s)	803
PsrI	GAACNNNNNNTAC	2 cut(s)	2745, 2777
PstNI	CAGNNNCTG	1 cut(s)	1105
PsuI	RGATCY	3 cut(s)	2430, 2535, 2858
PsyI	GACNNNGTC	1 cut(s)	902
PvuI	CGATCG	1 cut(s)	2646
PvuII	CAGCTG	1 cut(s)	791
RsaI	GTAC	6 cut(s)	1120, 1320, 1657, 2478, 2662, 2910
RsaNI	GTAC	6 cut(s)	1119, 1319, 1656, 2477, 2661, 2909
RseI	CAYNNNNRTG	5 cut(s)	431, 1076, 1341, 2084, 3025
SacI	GAGCTC	1 cut(s)	24
Sau96I	GGNCC	4 cut(s)	710, 803, 2923, 3229
SchI	GAGTC	9 cut(s)	511, 583, 887, 955, 1096, 2241, 2274, 3120, 3260
ScrFI	CCNGG	6 cut(s)	980, 981, 1277, 1644, 1922, 2121
SduI	GDGCHC	6 cut(s)	24, 138, 637, 823, 1143, 1277
SfaNI	GCATC	7 cut(s)	616, 1203, 1363, 1462, 1894, 2333, 2531
SfcI	CTRYAG	2 cut(s)	873, 1669
Sfr274I	CTCGAG	2 cut(s)	245, 1158
SinI	GGWCC	3 cut(s)	803, 2923, 3229
SlaI	CTCGAG	2 cut(s)	245, 1158
SmaI	CCCGGG	1 cut(s)	981
SmiMI	CAYNNNNRTG	5 cut(s)	431, 1076, 1341, 2084, 3025
SmlI	CTYRAG	7 cut(s)	245, 440, 1158, 1198, 1364, 2622, 3248
SmoI	CTYRAG	7 cut(s)	245, 440, 1158, 1198, 1364, 2622, 3248
SpeI	ACTAGT	1 cut(s)	1111
Sse9I	AATT	7 cut(s)	479, 538, 865, 2296, 2310, 2844, 3038
SseBI	AGGCCT	2 cut(s)	251, 571
SspMI	CTAG	6 cut(s)	698, 765, 950, 1112, 1169, 1686
SstI	GAGCTC	1 cut(s)	24
StuI	AGGCCT	2 cut(s)	251, 571
StyD4I	CCNGG	6 cut(s)	978, 979, 1275, 1642, 1920, 2119
StyI	CCWWGG	5 cut(s)	252, 273, 566, 1057, 1795
TaiI	ACGT	6 cut(s)	1168, 2514, 2561, 2606, 2763, 2867
TasI	AATT	7 cut(s)	479, 538, 865, 2296, 2310, 2844, 3038
TatI	WGTACW	4 cut(s)	1318, 1655, 2660, 2908
TauI	GCSGC	5 cut(s)	615, 2587, 2600, 3179, 3247
TscAI	CASTG	7 cut(s)	1678, 2169, 2237, 2417, 2984, 3171, 3213
TseFI	GTSAC	4 cut(s)	890, 1844, 2266, 3307
TseI	GCWGC	5 cut(s)	1226, 1475, 1838, 2356, 2999
Tsp45I	GTSAC	4 cut(s)	890, 1844, 2266, 3307
TspGWI	ACGGA	6 cut(s)	461, 1599, 1948, 2822, 3237, 3313
TspMI	CCCGGG	1 cut(s)	979
TspRI	CASTG	7 cut(s)	1678, 2169, 2237, 2417, 2984, 3171, 3213
Tth111I	GACNNNGTC	1 cut(s)	902
Van91I	CCANNNNNTGG	1 cut(s)	3166
VneI	GTGCAC	1 cut(s)	134
VpaK11BI	GGWCC	3 cut(s)	803, 2923, 3229
VspI	ATTAAT	1 cut(s)	525
XagI	CCTNNNNNAGG	2 cut(s)	256, 696
XapI	RAATTY	2 cut(s)	2296, 2844
XceI	RCATGY	3 cut(s)	964, 3017, 3202
XhoI	CTCGAG	2 cut(s)	245, 1158
XmaI	CCCGGG	1 cut(s)	979
XmiI	GTMKAC	2 cut(s)	876, 1496
XmnI	GAANNNNTTC	3 cut(s)	215, 1181, 1554
XspI	CTAG	6 cut(s)	698, 765, 950, 1112, 1169, 1686
Zsp2I	ATGCAT	1 cut(s)	2972

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.