Prupe.1G484400_v2.0.a1

Topless-related protein 1-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
40347676 .. 40354933
7258 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G484400.2

Sequence Viewer

Length: 3282 bp
ATGACGTCGTCTCTCAGTAGGGACCTCATCTTCTTGATCTTGCAGTTACTTGAAGAGGAAAAGTTCAAAGACACTCTTCATAAGCTTGAGCAAGAATCAGGATTGTTCTTTAATCTGAAGTATTTTGAGGAATTAGTACTTGGTGGGAACTGGGATGAGGTCGAGCGGTATCTTTTGGGGTTCACTAAAGTGGATGACAACCGGTATTCGATGAAGGTCTTCTTCGAAATTCGTAAGCAGAAGTATCTCGAGGCATTAGATAAGCAGGATAGAGCCAAAGCAGTAGATATCCTCGTGCAGGATCTGAAGGTTTTCGCGGGTTTTAATGAAGATTTGTTCAAGGAAATCACTCAGCTCCTGACACTAGACAATTTTAGGGAAAATGCTCAACTAGCTAGCTATAGAGATACGAAGACAGCAAGAGCAATTATGGTCATTGAACTTAAGAAGCTTATCGAGGCCAATCCTCTTTTCCGTGAAAAAACACAGTTTCCTAACTTAAGAACTTCAAGGTTGCGGATGCTTATTAACCAAAGCTTGAATTGGCAGCATTCCCTTTGTTCAAATCCTAGACAGAATCCTGATATAAGAACCCTATTTGTGGATCACTCTTGTAAAAATTCCAATGATTCATTCGCTCAATTAACAGCAAACAATCAGCTGATGGGTTCTGTACAAAGAGTTGATGGTTTTCTTCCTATGGGTTCTGTACAAACAGCAAACAGTCAGCTGATGGGTTCTGTAAATGGGTCCTTCCAACCCACACCAGCGCCAGTTCATCCTCCGTTTTCTGCATGGATGTCTATTCCTTCGACTGTAAATCATCCAGCAGCTTCTGGAGGAGGTATTGGTTTTGGTAGTCTAACAAATCCAGCTTCATCATTGAGGGGTCCTGGGGATTCTGATGATTTTTTCAGAACACGATTCTCTGGTGTTTCAGACAGGGTTATGTTGCCAGGGATTAATCCAGGTCAAAGTAGTACTACATTTAACGCAACAGAATTCCCCAAGACGGTTGCTCGGACTCTGAATCAGGGGTCAGCTCCCACAAGCATGGACTTCCATCCTGTTCAGCATACGCTGCTTCTAGTTGGAACTAATGTGGGGGATATAAGCTTGTGGGAAGTAAGTTCAAGGGAGAAGTTGGTATCAAGAAATTTTCAGGTATGGGATATCGGAGCAAGTTCAATGATGCTAAAGGCTAGTCTGATCAAGGATCCATGTGTCTCAGTTAATCGTATACTTTGGAGCCCTGATGGTTCTCTATTTGGAGTTGCATATTCTAAACACATAATGCAATTATACACTTATTTGGGTGGGAATGAGATTCGCCAACATTTGGAGATTGATGCCCATGTTGGTAGCATTAATGATCTGGCGTTCTGTAACCCAACCAAGCAACTCTCTGTCATTACTTGTGGTGATGATAAGGCCATTAAGGTGTGGGATGCATCAAATGGGTCAAAGTTGTATAGTTTTGAAGGTCATGATGCTCCGGTCCATTCTGTGTGCCCTCACAACAAGGAGAATGTCCATTTTATCTTTTCAACATCAGTAGATGGAAAAATAAGAGCATGGTTGTATGACAATCTGGGATCTAGGGTGGATTATGATGCTCCTGGCCGCTCGTGCACAACAATGGTCTACAGTGCAGATGGTAAAAGGCTCTTTTCATGTGGGACAAGCAAAGACGGAGAATCTCATGTTGTTGAATGGAATGAAAATGAAGGTGTAATAAAGAGGAATTACGTAGGATTTCAAAAACATTCTTTGGGCGTTGTTCAGTTTGATACAACCAAGAATAAGTTTTTAGCTGTTGGAGATGACTATGCAATCAAAGTTTGGGATATGGATAATACCAATCTTTTGACTAATATTGATGCTGAAGGAGGCCTACCAGCAAGTCCTTGCATTCGCTTCAACAAGGAGGGCTCTTTATTGGCTGTTTCTGCAAATGAAAATAGAGTCAAAATTTTAGCTACAATGGATGGTCTCCGGTTGATGCGCACTTATGAAAGTCACTCGCTTATTTCCTTGAGAAATGCATCTGAGACTGTAACAAAGAATGGTAGCACCATAAACCTGGATGATGTGAAACCAAGATTAACTGAAGAAGTCAATACAAGGATATGGAAGCTCACTGAGATCAGTGAAACTGCTCAGCTTCGGTCATTGAGGCTCTCGGCTATGATGAAATCAGACAAGATCTCAAGGTTGACATACAGTAATTCAGGCAGTGCCATTTTGGCATTGGGATCCAATGCCATCCATCTACTGTGGAGGTGGCCACGGGGTGACCATAATTCGAGTATCAAGGCAACAACCAAGGTTACCCCACAGTTAGTGCAACCGACTTCGGGCATTCTAATGACCAATGATCTTACTGGTGCTAAACCTGAATATGCACTACCCAGCTTTGCTTTGTCCAAGAATGATTCTTATGTCATGTCAACCTCTGGAGGGAAGCTATCTTTGTTTAACATGATGACATTCAAGACGATGACAACTTTCATGTGTCCACCCCCTGTGGCAACAAGTCTTGCTTTCCACCCGGACGACAATAATATAATTGCTGTTGGCATGGATGATTCCACCGTTCACATATACAATGCCCGTGTAGACGAGGTTAAGAACAAGCTTAAGGGTCACTCCAAAAGAGTCACGGGTCTTGCCTTCTCCCATGTTCTGCATACACTTGTTTCTCTTGGAGCGGATGCTCAGCTTATTGTGTGGAACTCTGATAAGTGGGAAAGGCAGAAGAACTGTTTCTTGCAAATTCCGGCTGGGAGGACACCTGCAACGATGTTTGAAACTCAGCTTCAGTATCACAAAGATCAGATACACTTCCTTGTTATACATGAGACTCAACTTGTAGTATATGAAACATCGAAACTTGAATGTGAAAAGCAGTGGGTTGTAGGAGAATCTGCAGCGCCAATCTCGCATGCAGCATTCTCTTGTGATAGCCAGTTAGTGTATGCCAGCTTTCAGGATGCAACTGTGCGTGTGTTTAATGCATCAAATCTGCAAGTGCAATGCCAGATTAATCCCAATGCTTATCTTCCTCCCGATTTCAGTTCTGCATCATACCCTCTAGTTGTAGCTGCACATCCACAAGAGCCAAACCAGTTTGCTGTAGGGCTAACTGATGGTGCAGTTGTGATCGTTGAACCACTTGAATCTGAAGACAAATGGGGTGTGCCTCCACCTGTTGACAATGGGTTACAAAGTGTCTTCCATACTACATCTCCAGTCAATGCTTCCAGTTTGGATCAACCCTAG

Protein Analysis

1094

Amino Acids

121.4

Weight (kDa)

6.28

Isoelectric Point (pI)

34.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2803
AatII GACGTC 1 cut(s) 8
Acc16I TGCGCA 1 cut(s) 2006
Acc36I ACCTGC 1 cut(s) 2803
AccB7I CCANNNNNTGG 1 cut(s) 1339
AccBSI CCGCTC 3 cut(s) 166, 1626, 2711
AccI GTMKAC 3 cut(s) 1240, 1644, 2619
AccII CGCG 1 cut(s) 317
AciI CCGC 5 cut(s) 166, 317, 517, 1624, 2711
AclWI GGATC 8 cut(s) 309, 612, 1211, 1224, 1603, 2250, 2263, 3279
AcoI YGGCCR 2 cut(s) 1621, 2285
AcsI RAATTY 6 cut(s) 228, 619, 1001, 1156, 1971, 2775
AcuI CTGAAG 6 cut(s) 137, 326, 1905, 2130, 2804, 3204
AcyI GRCGYC 1 cut(s) 5
AdeI CACNNNGTG 1 cut(s) 2294
AfaI GTAC 4 cut(s) 138, 675, 711, 982
AfiI CCNNNNNNNGG 6 cut(s) 298, 601, 1012, 1339, 2357, 2460
AflII CTTAAG 3 cut(s) 443, 499, 2639
AgeI ACCGGT 1 cut(s) 201
AjnI CCWGG 5 cut(s) 892, 955, 967, 1618, 2082
AjuI GAANNNNNNNTTGG 6 cut(s) 123, 155, 455, 487, 617, 649
AleI CACNNNNGTG 1 cut(s) 188
Alw21I GWGCWC 1 cut(s) 1634
Alw26I GTCTC 5 cut(s) 15, 1231, 1997, 2045, 2855
Alw44I GTGCAC 1 cut(s) 1630
AlwI GGATC 8 cut(s) 309, 612, 1211, 1224, 1603, 2250, 2263, 3279
AlwNI CAGNNNCTG 3 cut(s) 304, 358, 836
Ama87I CYCGRG 1 cut(s) 248
AoxI GGCC 5 cut(s) 459, 1431, 1621, 1891, 2285
ApaLI GTGCAC 1 cut(s) 1630
ApeKI GCWGC 6 cut(s) 547, 830, 1081, 2930, 2948, 3104
ApoI RAATTY 6 cut(s) 228, 619, 1001, 1156, 1971, 2775
AseI ATTAAT 3 cut(s) 963, 1368, 3045
AsiGI ACCGGT 1 cut(s) 201
Asp700I GAANNNNTTC 3 cut(s) 218, 311, 2765
AspLEI GCGC 3 cut(s) 772, 2007, 2935
AspS9I GGNCC 4 cut(s) 22, 750, 890, 1498
AsuC2I CCSGG 1 cut(s) 2552
AsuHPI GGTGA 2 cut(s) 1433, 2306
AsuII TTCGAA 1 cut(s) 225
AsuNHI GCTAGC 1 cut(s) 395
AvaI CYCGRG 1 cut(s) 248
AvaII GGWCC 4 cut(s) 22, 750, 890, 1498
BaeGI GKGCMC 2 cut(s) 1514, 1634
BalI TGGCCA 1 cut(s) 2287
BamHI GGATCC 2 cut(s) 1216, 2255
BanII GRGCYC 2 cut(s) 1253, 1934
BarI GAAGNNNNNNTAC 2 cut(s) 1878, 1910
BauI CACGAG 2 cut(s) 293, 1627
BbsI GAAGAC 4 cut(s) 211, 419, 3192, 3226
Bbv12I GWGCWC 1 cut(s) 1634
BbvI GCAGC 6 cut(s) 559, 842, 1068, 2942, 2960, 3091
BciT130I CCWGG 5 cut(s) 894, 957, 969, 1620, 2084
BclI TGATCA 1 cut(s) 1209
BcnI CCSGG 1 cut(s) 2552
BcoDI GTCTC 5 cut(s) 15, 1231, 1997, 2045, 2855
BfaI CTAG 9 cut(s) 365, 392, 396, 570, 1088, 1203, 1599, 3095, 3280
BfmI CTRYAG 4 cut(s) 400, 1645, 2928, 3135
BfoI RGCGCY 2 cut(s) 773, 2936
BfrI CTTAAG 3 cut(s) 443, 499, 2639
BfuAI ACCTGC 1 cut(s) 2803
BglI GCCNNNNNGGC 1 cut(s) 2246
BglII AGATCT 1 cut(s) 2205
BisI GCNGC 7 cut(s) 548, 831, 1082, 1624, 2931, 2949, 3105
BlpI GCTNAGC 2 cut(s) 2160, 2718
BlsI GCNGC 7 cut(s) 549, 832, 1083, 1625, 2932, 2950, 3106
BmcAI AGTACT 2 cut(s) 138, 982
Bme1390I CCNGG 6 cut(s) 894, 957, 969, 1620, 2084, 2552
Bme18I GGWCC 4 cut(s) 22, 750, 890, 1498
BmeT110I CYCGRG 1 cut(s) 248
BmgT120I GGNCC 4 cut(s) 22, 750, 890, 1498
BmiI GGNNCC 6 cut(s) 23, 751, 891, 1218, 1250, 2257
BmrFI CCNGG 6 cut(s) 894, 957, 969, 1620, 2084, 2552
BmrI ACTGGG 1 cut(s) 160
BmtI GCTAGC 1 cut(s) 399
BmuI ACTGGG 1 cut(s) 160
BpiI GAAGAC 4 cut(s) 211, 419, 3192, 3226
BpmI CTGGAG 3 cut(s) 858, 2478, 3234
Bpu1102I GCTNAGC 2 cut(s) 2160, 2718
Bpu14I TTCGAA 1 cut(s) 225
BpuEI CTTGAG 3 cut(s) 107, 2056, 2194
BpuMI CCSGG 1 cut(s) 2552
BsaAI YACGTR 1 cut(s) 1750
BsaHI GRCGYC 1 cut(s) 5
BsaI GGTCTC 1 cut(s) 1997
BsaJI CCNNGG 4 cut(s) 893, 956, 2288, 2325
BsaWI WCCGGW 3 cut(s) 201, 1495, 1995
BsaXI ACNNNNNCTCC 2 cut(s) 3232, 3262
Bsc4I CCNNNNNNNGG 6 cut(s) 298, 601, 1012, 1339, 2357, 2460
Bse118I RCCGGY 1 cut(s) 201
Bse1I ACTGG 7 cut(s) 155, 773, 2389, 2968, 3127, 3251, 3264
Bse3DI GCAATG 1 cut(s) 3041
BseBI CCWGG 5 cut(s) 894, 957, 969, 1620, 2084
BseDI CCNNGG 4 cut(s) 893, 956, 2288, 2325
BseLI CCNNNNNNNGG 6 cut(s) 298, 601, 1012, 1339, 2357, 2460
BseMI GCAATG 1 cut(s) 3041
BseMII CTCAG 8 cut(s) 28, 365, 1242, 2040, 2133, 2174, 2732, 2828
BseNI ACTGG 7 cut(s) 155, 773, 2389, 2968, 3127, 3251, 3264
BseRI GAGGAG 1 cut(s) 855
BseSI GKGCMC 2 cut(s) 1514, 1634
BseXI GCAGC 6 cut(s) 559, 842, 1068, 2942, 2960, 3091
BseYI CCCAGC 2 cut(s) 2411, 2783
BsgI GTGCAG 4 cut(s) 317, 1671, 3090, 3174
Bsh1236I CGCG 1 cut(s) 317
BshFI GGCC 5 cut(s) 461, 1433, 1623, 1893, 2287
BshTI ACCGGT 1 cut(s) 201
BsiHKAI GWGCWC 1 cut(s) 1634
BsiHKCI CYCGRG 1 cut(s) 248
BsiSI CCGG 5 cut(s) 202, 1496, 1996, 2552, 2780
BslFI GGGAC 2 cut(s) 35, 1693
BslI CCNNNNNNNGG 6 cut(s) 298, 601, 1012, 1339, 2357, 2460
BsmAI GTCTC 5 cut(s) 15, 1231, 1997, 2045, 2855
BsmBI CGTCTC 1 cut(s) 15
BsmFI GGGAC 2 cut(s) 35, 1693
BsmI GAATGC 4 cut(s) 550, 1911, 2361, 2951
BsnI GGCC 5 cut(s) 461, 1433, 1623, 1893, 2287
Bso31I GGTCTC 1 cut(s) 1997
BsoBI CYCGRG 1 cut(s) 248
Bsp119I TTCGAA 1 cut(s) 225
Bsp1286I GDGCHC 4 cut(s) 1253, 1514, 1634, 1934
Bsp1407I TGTACA 2 cut(s) 673, 709
Bsp1720I GCTNAGC 2 cut(s) 2160, 2718
BspACI CCGC 5 cut(s) 166, 317, 517, 1624, 2711
BspANI GGCC 5 cut(s) 461, 1433, 1623, 1893, 2287
BspCNI CTCAG 8 cut(s) 27, 364, 1241, 2041, 2134, 2173, 2731, 2827
BspFNI CGCG 1 cut(s) 317
BspHI TCATGA 1 cut(s) 1486
BspLI GGNNCC 6 cut(s) 23, 751, 891, 1218, 1250, 2257
BspMAI CTGCAG 1 cut(s) 2932
BspMI ACCTGC 1 cut(s) 2803
BspOI GCTAGC 1 cut(s) 399
BspPI GGATC 8 cut(s) 309, 612, 1211, 1224, 1603, 2250, 2263, 3279
BspT104I TTCGAA 1 cut(s) 225
BspTI CTTAAG 3 cut(s) 443, 499, 2639
BspTNI GGTCTC 1 cut(s) 1997
BsrBI CCGCTC 3 cut(s) 166, 1626, 2711
BsrDI GCAATG 1 cut(s) 3041
BsrFI RCCGGY 1 cut(s) 201
BsrGI TGTACA 2 cut(s) 673, 709
BsrI ACTGG 7 cut(s) 155, 773, 2389, 2968, 3127, 3251, 3264
BssAI RCCGGY 1 cut(s) 201
BssECI CCNNGG 4 cut(s) 893, 956, 2288, 2325
BssNAI GTATAC 1 cut(s) 1241
BssNI GRCGYC 1 cut(s) 5
BssSI CACGAG 2 cut(s) 293, 1627
BssT1I CCWWGG 1 cut(s) 2325
Bst1107I GTATAC 1 cut(s) 1241
Bst2BI CACGAG 2 cut(s) 293, 1627
Bst2UI CCWGG 5 cut(s) 894, 957, 969, 1620, 2084
Bst6I CTCTTC 2 cut(s) 48, 81
BstACI GRCGYC 1 cut(s) 5
BstAFI CTTAAG 3 cut(s) 443, 499, 2639
BstAPI GCANNNNNTGC 1 cut(s) 1081
BstAUI TGTACA 2 cut(s) 673, 709
BstBAI YACGTR 1 cut(s) 1750
BstBI TTCGAA 1 cut(s) 225
BstC8I GCNNGC 3 cut(s) 397, 2946, 2983
BstDEI CTNAG 8 cut(s) 14, 351, 1228, 2049, 2142, 2160, 2718, 2814
BstDSI CCRYGG 1 cut(s) 2288
BstEII GGTNACC 2 cut(s) 2294, 2329
BstENI CCTNNNNNAGG 1 cut(s) 296
BstFNI CGCG 1 cut(s) 317
BstH2I RGCGCY 2 cut(s) 773, 2936
BstHHI GCGC 3 cut(s) 772, 2007, 2935
BstMAI GTCTC 5 cut(s) 15, 1231, 1997, 2045, 2855
BstMWI GCNNNNNNNGC 6 cut(s) 392, 1081, 1629, 1949, 2246, 2941
BstNI CCWGG 5 cut(s) 894, 957, 969, 1620, 2084
BstNSI RCATGY 1 cut(s) 2948
BstPI GGTNACC 2 cut(s) 2294, 2329
BstSCI CCNGG 6 cut(s) 892, 955, 967, 1618, 2082, 2550
BstSFI CTRYAG 4 cut(s) 400, 1645, 2928, 3135
BstSLI GKGCMC 2 cut(s) 1514, 1634
BstSNI TACGTA 1 cut(s) 1750
BstUI CGCG 1 cut(s) 317
BstV1I GCAGC 6 cut(s) 559, 842, 1068, 2942, 2960, 3091
BstV2I GAAGAC 4 cut(s) 211, 419, 3192, 3226
BstX2I RGATCY 5 cut(s) 301, 1216, 1595, 2205, 2255
BstXI CCANNNNNNTGG 2 cut(s) 1054, 2083
BstYI RGATCY 5 cut(s) 301, 1216, 1595, 2205, 2255
BstZ17I GTATAC 1 cut(s) 1241
BsuRI GGCC 5 cut(s) 461, 1433, 1623, 1893, 2287
BtgI CCRYGG 1 cut(s) 2288
BtsI GCAGTG 2 cut(s) 2242, 2915
BtsIMutI CAGTG 5 cut(s) 1654, 2139, 2155, 2242, 2915
BveI ACCTGC 1 cut(s) 2803
Cac8I GCNNGC 3 cut(s) 397, 2946, 2983
CaiI CAGNNNCTG 3 cut(s) 304, 358, 836
CciI TCATGA 1 cut(s) 1486
CfoI GCGC 3 cut(s) 772, 2007, 2935
Cfr10I RCCGGY 1 cut(s) 201
Cfr13I GGNCC 4 cut(s) 22, 750, 890, 1498
Csp6I GTAC 4 cut(s) 137, 674, 710, 981
CspAI ACCGGT 1 cut(s) 201
CviQI GTAC 4 cut(s) 137, 674, 710, 981
DdeI CTNAG 8 cut(s) 14, 351, 1228, 2049, 2142, 2160, 2718, 2814
DraIII CACNNNGTG 1 cut(s) 2294
EaeI YGGCCR 2 cut(s) 1621, 2285
Eam1104I CTCTTC 2 cut(s) 48, 81
EarI CTCTTC 2 cut(s) 48, 81
Eco105I TACGTA 1 cut(s) 1750
Eco130I CCWWGG 1 cut(s) 2325
Eco147I AGGCCT 1 cut(s) 1893
Eco24I GRGCYC 2 cut(s) 1253, 1934
Eco31I GGTCTC 1 cut(s) 1997
Eco32I GATATC 2 cut(s) 289, 1174
Eco47I GGWCC 4 cut(s) 22, 750, 890, 1498
Eco57I CTGAAG 6 cut(s) 137, 326, 1905, 2130, 2804, 3204
Eco88I CYCGRG 1 cut(s) 248
Eco91I GGTNACC 2 cut(s) 2294, 2329
EcoNI CCTNNNNNAGG 1 cut(s) 296
EcoO109I RGGNCCY 3 cut(s) 22, 750, 890
EcoO65I GGTNACC 2 cut(s) 2294, 2329
EcoRI GAATTC 1 cut(s) 1001
EcoRII CCWGG 5 cut(s) 892, 955, 967, 1618, 2082
EcoRV GATATC 2 cut(s) 289, 1174
EcoT14I CCWWGG 1 cut(s) 2325
EcoT22I ATGCAT 3 cut(s) 1453, 2047, 3019
EcoT38I GRGCYC 2 cut(s) 1253, 1934
ErhI CCWWGG 1 cut(s) 2325
Esp3I CGTCTC 1 cut(s) 15
FalI AAGNNNNNCTT 6 cut(s) 60, 92, 206, 238, 2527, 2559
FaqI GGGAC 2 cut(s) 35, 1693
FauI CCCGC 1 cut(s) 310
FbaI TGATCA 1 cut(s) 1209
FblI GTMKAC 3 cut(s) 1240, 1644, 2619
Fnu4HI GCNGC 7 cut(s) 548, 831, 1082, 1624, 2931, 2949, 3105
FriOI GRGCYC 2 cut(s) 1253, 1934
Fsp4HI GCNGC 7 cut(s) 548, 831, 1082, 1624, 2931, 2949, 3105
FspAI RTGCGCAY 1 cut(s) 2006
FspBI CTAG 9 cut(s) 365, 392, 396, 570, 1088, 1203, 1599, 3095, 3280
FspI TGCGCA 1 cut(s) 2006
GlaI GCGC 3 cut(s) 771, 2006, 2934
GluI GCNGC 7 cut(s) 548, 831, 1082, 1624, 2931, 2949, 3105
GsaI CCCAGC 2 cut(s) 2415, 2787
GsuI CTGGAG 3 cut(s) 858, 2478, 3234
HaeII RGCGCY 2 cut(s) 773, 2936
HaeIII GGCC 5 cut(s) 461, 1433, 1623, 1893, 2287
HapII CCGG 5 cut(s) 202, 1496, 1996, 2552, 2780
HhaI GCGC 3 cut(s) 772, 2007, 2935
Hin1I GRCGYC 1 cut(s) 5
Hin6I GCGC 3 cut(s) 770, 2005, 2933
HinP1I GCGC 3 cut(s) 770, 2005, 2933
HincII GTYRAC 3 cut(s) 2217, 2451, 3214
HindII GTYRAC 3 cut(s) 2217, 2451, 3214
HindIII AAGCTT 5 cut(s) 83, 449, 535, 1114, 2636
HpaII CCGG 5 cut(s) 202, 1496, 1996, 2552, 2780
HphI GGTGA 2 cut(s) 1433, 2306
Hpy99I CGWCG 1 cut(s) 10
HpyAV CCTTC 8 cut(s) 208, 301, 763, 819, 1475, 1721, 1880, 2683
HpyCH4IV ACGT 2 cut(s) 5, 1749
HpyF10VI GCNNNNNNNGC 6 cut(s) 392, 1081, 1629, 1949, 2246, 2941
HpyF3I CTNAG 8 cut(s) 14, 351, 1228, 2049, 2142, 2160, 2718, 2814
HpySE526I ACGT 2 cut(s) 5, 1749
Hsp92I GRCGYC 1 cut(s) 5
HspAI GCGC 3 cut(s) 770, 2005, 2933
Ksp22I TGATCA 1 cut(s) 1209
LmnI GCTCC 7 cut(s) 360, 1048, 1178, 1248, 1498, 1621, 2708
Lsp1109I GCAGC 6 cut(s) 559, 842, 1068, 2942, 2960, 3091
MaeI CTAG 9 cut(s) 365, 392, 396, 570, 1088, 1203, 1599, 3095, 3280
MaeII ACGT 2 cut(s) 5, 1749
MaeIII GTNAC 9 cut(s) 45, 1385, 2018, 2056, 2294, 2329, 2645, 2659, 3222
MbiI CCGCTC 3 cut(s) 166, 1626, 2711
MflI RGATCY 5 cut(s) 301, 1216, 1595, 2205, 2255
MhlI GDGCHC 4 cut(s) 1253, 1514, 1634, 1934
MlsI TGGCCA 1 cut(s) 2287
MluNI TGGCCA 1 cut(s) 2287
MlyI GAGTC 4 cut(s) 1018, 1974, 2667, 2857
MmeI TCCRAC 3 cut(s) 781, 1072, 1798
Mox20I TGGCCA 1 cut(s) 2287
Mph1103I ATGCAT 3 cut(s) 1453, 2047, 3019
MroXI GAANNNNTTC 3 cut(s) 218, 311, 2765
MscI TGGCCA 1 cut(s) 2287
MslI CAYNNNNRTG 5 cut(s) 188, 1052, 1439, 1637, 2366
Msp20I TGGCCA 1 cut(s) 2287
MspA1I CMGCKG 2 cut(s) 661, 730
MspCI CTTAAG 3 cut(s) 443, 499, 2639
MspI CCGG 5 cut(s) 202, 1496, 1996, 2552, 2780
MspR9I CCNGG 6 cut(s) 894, 957, 969, 1620, 2084, 2552
Mva1269I GAATGC 4 cut(s) 550, 1911, 2361, 2951
MvaI CCWGG 5 cut(s) 894, 957, 969, 1620, 2084
MvnI CGCG 1 cut(s) 317
MwoI GCNNNNNNNGC 6 cut(s) 392, 1081, 1629, 1949, 2246, 2941
NciI CCSGG 1 cut(s) 2552
NheI GCTAGC 1 cut(s) 395
NlaIV GGNNCC 6 cut(s) 23, 751, 891, 1218, 1250, 2257
NmeAIII GCCGAG 1 cut(s) 2162
NmuCI GTSAC 4 cut(s) 2018, 2294, 2645, 2659
NsbI TGCGCA 1 cut(s) 2006
NsiI ATGCAT 3 cut(s) 1453, 2047, 3019
NspI RCATGY 1 cut(s) 2948
NspV TTCGAA 1 cut(s) 225
OliI CACNNNNGTG 1 cut(s) 188
PaeI GCATGC 1 cut(s) 2948
PaeR7I CTCGAG 1 cut(s) 248
PagI TCATGA 1 cut(s) 1486
PaqCI CACCTGC 1 cut(s) 2803
PceI AGGCCT 1 cut(s) 1893
PctI GAATGC 4 cut(s) 550, 1911, 2361, 2951
PdmI GAANNNNTTC 3 cut(s) 218, 311, 2765
PflFI GACNNNGTC 1 cut(s) 7
PflMI CCANNNNNTGG 1 cut(s) 1339
PinAI ACCGGT 1 cut(s) 201
PkrI GCNGC 7 cut(s) 549, 832, 1083, 1625, 2932, 2950, 3106
PleI GAGTC 4 cut(s) 1018, 1973, 2666, 2857
PpsI GAGTC 4 cut(s) 1018, 1973, 2666, 2857
Ppu21I YACGTR 1 cut(s) 1750
PpuMI RGGWCCY 3 cut(s) 22, 750, 890
PshBI ATTAAT 3 cut(s) 963, 1368, 3045
Psp5II RGGWCCY 3 cut(s) 22, 750, 890
Psp6I CCWGG 5 cut(s) 892, 955, 967, 1618, 2082
PspEI GGTNACC 2 cut(s) 2294, 2329
PspFI CCCAGC 2 cut(s) 2411, 2783
PspGI CCWGG 5 cut(s) 892, 955, 967, 1618, 2082
PspN4I GGNNCC 6 cut(s) 23, 751, 891, 1218, 1250, 2257
PspPI GGNCC 4 cut(s) 22, 750, 890, 1498
PspPPI RGGWCCY 3 cut(s) 22, 750, 890
PstI CTGCAG 1 cut(s) 2932
PstNI CAGNNNCTG 3 cut(s) 304, 358, 836
PsuI RGATCY 5 cut(s) 301, 1216, 1595, 2205, 2255
PsyI GACNNNGTC 1 cut(s) 7
PvuII CAGCTG 2 cut(s) 661, 730
RsaI GTAC 4 cut(s) 138, 675, 711, 982
RsaNI GTAC 4 cut(s) 137, 674, 710, 981
RseI CAYNNNNRTG 5 cut(s) 188, 1052, 1439, 1637, 2366
SatI GCNGC 7 cut(s) 548, 831, 1082, 1624, 2931, 2949, 3105
Sau96I GGNCC 4 cut(s) 22, 750, 890, 1498
ScaI AGTACT 2 cut(s) 138, 982
SchI GAGTC 4 cut(s) 1018, 1974, 2667, 2857
ScrFI CCNGG 6 cut(s) 894, 957, 969, 1620, 2084, 2552
SduI GDGCHC 4 cut(s) 1253, 1514, 1634, 1934
SfcI CTRYAG 4 cut(s) 400, 1645, 2928, 3135
Sfr274I CTCGAG 1 cut(s) 248
SfuI TTCGAA 1 cut(s) 225
SinI GGWCC 4 cut(s) 22, 750, 890, 1498
SlaI CTCGAG 1 cut(s) 248
SmiMI CAYNNNNRTG 5 cut(s) 188, 1052, 1439, 1637, 2366
SmlI CTYRAG 7 cut(s) 86, 248, 443, 499, 2035, 2209, 2639
SmoI CTYRAG 7 cut(s) 86, 248, 443, 499, 2035, 2209, 2639
SnaBI TACGTA 1 cut(s) 1750
SphI GCATGC 1 cut(s) 2948
SseBI AGGCCT 1 cut(s) 1893
SsiI CCGC 5 cut(s) 166, 317, 517, 1624, 2711
SspI AATATT 1 cut(s) 1876
SspMI CTAG 9 cut(s) 365, 392, 396, 570, 1088, 1203, 1599, 3095, 3280
StuI AGGCCT 1 cut(s) 1893
StyD4I CCNGG 6 cut(s) 892, 955, 967, 1618, 2082, 2550
StyI CCWWGG 1 cut(s) 2325
TaiI ACGT 2 cut(s) 8, 1752
TaqI TCGA 8 cut(s) 162, 209, 225, 249, 456, 812, 2306, 2888
TaqII GACCGA 1 cut(s) 2157
TatI WGTACW 4 cut(s) 136, 673, 709, 980
TauI GCSGC 1 cut(s) 1626
TscAI CASTG 5 cut(s) 1654, 2146, 2155, 2242, 2915
TseFI GTSAC 4 cut(s) 2018, 2294, 2645, 2659
TseI GCWGC 6 cut(s) 547, 830, 1081, 2930, 2948, 3104
Tsp45I GTSAC 4 cut(s) 2018, 2294, 2645, 2659
TspGWI ACGGA 3 cut(s) 464, 774, 1707
TspRI CASTG 5 cut(s) 1654, 2146, 2155, 2242, 2915
Tth111I GACNNNGTC 1 cut(s) 7
Van91I CCANNNNNTGG 1 cut(s) 1339
Vha464I CTTAAG 3 cut(s) 443, 499, 2639
VneI GTGCAC 1 cut(s) 1630
VpaK11BI GGWCC 4 cut(s) 22, 750, 890, 1498
VspI ATTAAT 3 cut(s) 963, 1368, 3045
XagI CCTNNNNNAGG 1 cut(s) 296
XapI RAATTY 6 cut(s) 228, 619, 1001, 1156, 1971, 2775
XceI RCATGY 1 cut(s) 2948
XcmI CCANNNNNNNNNTGG 1 cut(s) 2248
XhoI CTCGAG 1 cut(s) 248
XmiI GTMKAC 3 cut(s) 1240, 1644, 2619
XmnI GAANNNNTTC 3 cut(s) 218, 311, 2765
XspI CTAG 9 cut(s) 365, 392, 396, 570, 1088, 1203, 1599, 3095, 3280
ZraI GACGTC 1 cut(s) 6
ZrmI AGTACT 2 cut(s) 138, 982
Zsp2I ATGCAT 3 cut(s) 1453, 2047, 3019
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.