Topless-related protein 1-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Zn_ribbon_20 | PF23551 | 362 - 395 | 9.6e-09 | Zinc beta-ribbon domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 758 |
| AccB1I | GGYRCC | 1 cut(s) | 758 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 59 |
| AciI | CCGC | 2 cut(s) | 294, 1202 |
| AclWI | GGATC | 1 cut(s) | 897 |
| AcuI | CTGAAG | 1 cut(s) | 320 |
| AfaI | GTAC | 2 cut(s) | 760, 1115 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 59, 664, 706, 727, 858, 1024 |
| AflII | CTTAAG | 1 cut(s) | 28 |
| AgsI | TTSAA | 3 cut(s) | 119, 165, 673 |
| AjnI | CCWGG | 7 cut(s) | 88, 129, 266, 492, 657, 941, 1214 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 981, 1013 |
| Alw21I | GWGCWC | 1 cut(s) | 882 |
| Alw26I | GTCTC | 1 cut(s) | 207 |
| AlwI | GGATC | 1 cut(s) | 897 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 224, 227, 493 |
| AoxI | GGCC | 5 cut(s) | 50, 253, 609, 718, 984 |
| ApaI | GGGCCC | 1 cut(s) | 988 |
| ApeKI | GCWGC | 4 cut(s) | 221, 224, 676, 790 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 67, 996 |
| Asp718I | GGTACC | 1 cut(s) | 758 |
| AspS9I | GGNCC | 6 cut(s) | 244, 254, 490, 718, 984, 985 |
| AsuC2I | CCSGG | 1 cut(s) | 1019 |
| AsuHPI | GGTGA | 5 cut(s) | 34, 308, 647, 985, 1022 |
| AvaII | GGWCC | 2 cut(s) | 244, 490 |
| BaeGI | GKGCMC | 1 cut(s) | 988 |
| BanI | GGYRCC | 1 cut(s) | 758 |
| BanII | GRGCYC | 3 cut(s) | 882, 988, 1040 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 69, 101 |
| BbsI | GAAGAC | 3 cut(s) | 40, 1020, 1224 |
| Bbv12I | GWGCWC | 1 cut(s) | 882 |
| BbvCI | CCTCAGC | 1 cut(s) | 774 |
| BbvI | GCAGC | 4 cut(s) | 211, 233, 688, 802 |
| BccI | CCATC | 3 cut(s) | 530, 920, 1022 |
| BciT130I | CCWGG | 7 cut(s) | 90, 131, 268, 494, 659, 943, 1216 |
| BclI | TGATCA | 1 cut(s) | 951 |
| BcnI | CCSGG | 1 cut(s) | 1019 |
| BcoDI | GTCTC | 1 cut(s) | 207 |
| BfaI | CTAG | 2 cut(s) | 504, 732 |
| BfrI | CTTAAG | 1 cut(s) | 28 |
| BisI | GCNGC | 4 cut(s) | 222, 225, 677, 791 |
| BlpI | GCTNAGC | 1 cut(s) | 876 |
| BlsI | GCNGC | 4 cut(s) | 223, 226, 678, 792 |
| Bme1390I | CCNGG | 8 cut(s) | 90, 131, 268, 494, 659, 943, 1019, 1216 |
| Bme18I | GGWCC | 2 cut(s) | 244, 490 |
| BmgT120I | GGNCC | 6 cut(s) | 244, 254, 490, 718, 984, 985 |
| BmiI | GGNNCC | 2 cut(s) | 760, 986 |
| BmrFI | CCNGG | 8 cut(s) | 90, 131, 268, 494, 659, 943, 1019, 1216 |
| BmrI | ACTGGG | 1 cut(s) | 375 |
| BmsI | GCATC | 5 cut(s) | 160, 361, 625, 1055, 1063 |
| BmuI | ACTGGG | 1 cut(s) | 375 |
| BoxI | GACNNNNGTC | 1 cut(s) | 294 |
| BpiI | GAAGAC | 3 cut(s) | 40, 1020, 1224 |
| BpmI | CTGGAG | 5 cut(s) | 437, 659, 779, 878, 1223 |
| Bpu10I | CCTNAGC | 2 cut(s) | 356, 774 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 876 |
| BpuEI | CTTGAG | 2 cut(s) | 67, 866 |
| BpuMI | CCSGG | 1 cut(s) | 1019 |
| BsaI | GGTCTC | 1 cut(s) | 207 |
| BsaJI | CCNNGG | 3 cut(s) | 18, 129, 942 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 509, 539, 578, 608 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 59, 664, 706, 727, 858, 1024 |
| Bse1I | ACTGG | 2 cut(s) | 370, 1224 |
| BseBI | CCWGG | 7 cut(s) | 90, 131, 268, 494, 659, 943, 1216 |
| BseDI | CCNNGG | 3 cut(s) | 18, 129, 942 |
| BseGI | GGATG | 4 cut(s) | 376, 1033, 1078, 1220 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 59, 664, 706, 727, 858, 1024 |
| BseMII | CTCAG | 7 cut(s) | 219, 470, 696, 728, 765, 782, 867 |
| BseNI | ACTGG | 2 cut(s) | 370, 1224 |
| BseRI | GAGGAG | 2 cut(s) | 200, 656 |
| BseSI | GKGCMC | 1 cut(s) | 988 |
| BseXI | GCAGC | 4 cut(s) | 211, 233, 688, 802 |
| BseYI | CCCAGC | 1 cut(s) | 217 |
| BshFI | GGCC | 5 cut(s) | 52, 255, 611, 720, 986 |
| BshNI | GGYRCC | 1 cut(s) | 758 |
| BsiHKAI | GWGCWC | 1 cut(s) | 882 |
| BsiSI | CCGG | 1 cut(s) | 1018 |
| BslFI | GGGAC | 1 cut(s) | 1034 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 59, 664, 706, 727, 858, 1024 |
| BsmAI | GTCTC | 1 cut(s) | 207 |
| BsmFI | GGGAC | 1 cut(s) | 1034 |
| BsnI | GGCC | 5 cut(s) | 52, 255, 611, 720, 986 |
| Bso31I | GGTCTC | 1 cut(s) | 207 |
| Bsp120I | GGGCCC | 1 cut(s) | 984 |
| Bsp1286I | GDGCHC | 3 cut(s) | 882, 988, 1040 |
| Bsp143I | GATC | 2 cut(s) | 889, 951 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 876 |
| Bsp19I | CCATGG | 1 cut(s) | 18 |
| BspACI | CCGC | 2 cut(s) | 294, 1202 |
| BspANI | GGCC | 5 cut(s) | 52, 255, 611, 720, 986 |
| BspCNI | CTCAG | 7 cut(s) | 220, 471, 697, 727, 766, 781, 868 |
| BspLI | GGNNCC | 2 cut(s) | 760, 986 |
| BspPI | GGATC | 1 cut(s) | 897 |
| BspQI | GCTCTTC | 1 cut(s) | 794 |
| BspT107I | GGYRCC | 1 cut(s) | 758 |
| BspTI | CTTAAG | 1 cut(s) | 28 |
| BspTNI | GGTCTC | 1 cut(s) | 207 |
| BsrI | ACTGG | 2 cut(s) | 370, 1224 |
| BssECI | CCNNGG | 3 cut(s) | 18, 129, 942 |
| BssMI | GATC | 2 cut(s) | 889, 951 |
| BssT1I | CCWWGG | 1 cut(s) | 18 |
| Bst2UI | CCWGG | 7 cut(s) | 90, 131, 268, 494, 659, 943, 1216 |
| Bst4CI | ACNGT | 1 cut(s) | 1166 |
| Bst6I | CTCTTC | 4 cut(s) | 120, 506, 657, 794 |
| BstAFI | CTTAAG | 1 cut(s) | 28 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1104 |
| BstC8I | GCNNGC | 1 cut(s) | 279 |
| BstDSI | CCRYGG | 1 cut(s) | 18 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 662, 704 |
| BstF5I | GGATG | 4 cut(s) | 376, 1033, 1078, 1220 |
| BstKTI | GATC | 2 cut(s) | 892, 954 |
| BstMAI | GTCTC | 1 cut(s) | 207 |
| BstMBI | GATC | 2 cut(s) | 889, 951 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 320, 407, 872, 1104 |
| BstNI | CCWGG | 7 cut(s) | 90, 131, 268, 494, 659, 943, 1216 |
| BstNSI | RCATGY | 1 cut(s) | 937 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 294 |
| BstSCI | CCNGG | 8 cut(s) | 88, 129, 266, 492, 657, 941, 1017, 1214 |
| BstSLI | GKGCMC | 1 cut(s) | 988 |
| BstV1I | GCAGC | 4 cut(s) | 211, 233, 688, 802 |
| BstV2I | GAAGAC | 3 cut(s) | 40, 1020, 1224 |
| BstX2I | RGATCY | 1 cut(s) | 889 |
| BstYI | RGATCY | 1 cut(s) | 889 |
| BsuRI | GGCC | 5 cut(s) | 52, 255, 611, 720, 986 |
| BtgI | CCRYGG | 1 cut(s) | 18 |
| BtsCI | GGATG | 4 cut(s) | 376, 1033, 1078, 1220 |
| BtsI | GCAGTG | 1 cut(s) | 1102 |
| BtsIMutI | CAGTG | 1 cut(s) | 1102 |
| Cac8I | GCNNGC | 1 cut(s) | 279 |
| CaiI | CAGNNNCTG | 3 cut(s) | 224, 227, 493 |
| Cfr13I | GGNCC | 6 cut(s) | 244, 254, 490, 718, 984, 985 |
| Csp6I | GTAC | 2 cut(s) | 759, 1114 |
| CviAII | CATG | 9 cut(s) | 19, 54, 320, 404, 508, 725, 832, 934, 1024 |
| CviQI | GTAC | 2 cut(s) | 759, 1114 |
| DpnI | GATC | 2 cut(s) | 891, 953 |
| DpnII | GATC | 2 cut(s) | 889, 951 |
| Eam1104I | CTCTTC | 4 cut(s) | 120, 506, 657, 794 |
| EarI | CTCTTC | 4 cut(s) | 120, 506, 657, 794 |
| Ecl136II | GAGCTC | 1 cut(s) | 880 |
| Eco130I | CCWWGG | 1 cut(s) | 18 |
| Eco147I | AGGCCT | 1 cut(s) | 611 |
| Eco24I | GRGCYC | 3 cut(s) | 882, 988, 1040 |
| Eco31I | GGTCTC | 1 cut(s) | 207 |
| Eco47I | GGWCC | 2 cut(s) | 244, 490 |
| Eco53kI | GAGCTC | 1 cut(s) | 880 |
| Eco57I | CTGAAG | 1 cut(s) | 320 |
| EcoICRI | GAGCTC | 1 cut(s) | 880 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 662, 704 |
| EcoO109I | RGGNCCY | 2 cut(s) | 490, 718 |
| EcoRII | CCWGG | 7 cut(s) | 88, 129, 266, 492, 657, 941, 1214 |
| EcoT14I | CCWWGG | 1 cut(s) | 18 |
| EcoT22I | ATGCAT | 1 cut(s) | 1048 |
| EcoT38I | GRGCYC | 3 cut(s) | 882, 988, 1040 |
| ErhI | CCWWGG | 1 cut(s) | 18 |
| FaeI | CATG | 9 cut(s) | 22, 57, 323, 407, 511, 728, 835, 937, 1027 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 293, 325 |
| FaqI | GGGAC | 1 cut(s) | 1034 |
| FatI | CATG | 9 cut(s) | 18, 53, 319, 403, 507, 724, 831, 933, 1023 |
| FbaI | TGATCA | 1 cut(s) | 951 |
| Fnu4HI | GCNGC | 4 cut(s) | 222, 225, 677, 791 |
| FokI | GGATG | 4 cut(s) | 383, 1040, 1085, 1207 |
| FriOI | GRGCYC | 3 cut(s) | 882, 988, 1040 |
| Fsp4HI | GCNGC | 4 cut(s) | 222, 225, 677, 791 |
| FspBI | CTAG | 2 cut(s) | 504, 732 |
| GluI | GCNGC | 4 cut(s) | 222, 225, 677, 791 |
| GsaI | CCCAGC | 1 cut(s) | 221 |
| GsuI | CTGGAG | 5 cut(s) | 437, 659, 779, 878, 1223 |
| HaeIII | GGCC | 5 cut(s) | 52, 255, 611, 720, 986 |
| HapII | CCGG | 1 cut(s) | 1018 |
| Hin1II | CATG | 9 cut(s) | 22, 57, 323, 407, 511, 728, 835, 937, 1027 |
| HindIII | AAGCTT | 2 cut(s) | 120, 530 |
| HinfI | GANTC | 3 cut(s) | 11, 203, 524 |
| HpaII | CCGG | 1 cut(s) | 1018 |
| HphI | GGTGA | 5 cut(s) | 34, 308, 647, 985, 1022 |
| Hpy166II | GTNNAC | 1 cut(s) | 753 |
| Hpy188I | TCNGA | 4 cut(s) | 184, 300, 480, 706 |
| Hpy188III | TCNNGA | 8 cut(s) | 60, 638, 670, 796, 827, 895, 1001, 1087 |
| Hpy8I | GTNNAC | 1 cut(s) | 753 |
| HpyAV | CCTTC | 8 cut(s) | 171, 565, 592, 731, 731, 832, 964, 1001 |
| HpyCH4III | ACNGT | 1 cut(s) | 1166 |
| HpyCH4V | TGCA | 7 cut(s) | 151, 277, 410, 616, 1046, 1098, 1107 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 320, 407, 872, 1104 |
| Hsp92II | CATG | 9 cut(s) | 22, 57, 323, 407, 511, 728, 835, 937, 1027 |
| KpnI | GGTACC | 1 cut(s) | 762 |
| Ksp22I | TGATCA | 1 cut(s) | 951 |
| Kzo9I | GATC | 2 cut(s) | 889, 951 |
| LguI | GCTCTTC | 1 cut(s) | 794 |
| LmnI | GCTCC | 6 cut(s) | 382, 601, 798, 871, 1155, 1201 |
| Lsp1109I | GCAGC | 4 cut(s) | 211, 233, 688, 802 |
| LweI | GCATC | 5 cut(s) | 160, 361, 625, 1055, 1063 |
| MaeI | CTAG | 2 cut(s) | 504, 732 |
| MaeIII | GTNAC | 8 cut(s) | 98, 361, 653, 709, 827, 929, 1142, 1166 |
| MalI | GATC | 2 cut(s) | 891, 953 |
| MboI | GATC | 2 cut(s) | 889, 951 |
| MboII | GAAGA | 9 cut(s) | 45, 107, 313, 316, 523, 674, 811, 1025, 1224 |
| MflI | RGATCY | 1 cut(s) | 889 |
| MhlI | GDGCHC | 3 cut(s) | 882, 988, 1040 |
| MlyI | GAGTC | 1 cut(s) | 533 |
| MmeI | TCCRAC | 1 cut(s) | 409 |
| Mph1103I | ATGCAT | 1 cut(s) | 1048 |
| MroXI | GAANNNNTTC | 2 cut(s) | 67, 996 |
| MseI | TTAA | 6 cut(s) | 29, 545, 624, 780, 1179, 1249 |
| MspA1I | CMGCKG | 1 cut(s) | 224 |
| MspCI | CTTAAG | 1 cut(s) | 28 |
| MspI | CCGG | 1 cut(s) | 1018 |
| MspR9I | CCNGG | 8 cut(s) | 90, 131, 268, 494, 659, 943, 1019, 1216 |
| MvaI | CCWGG | 7 cut(s) | 90, 131, 268, 494, 659, 943, 1216 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 320, 407, 872, 1104 |
| NciI | CCSGG | 1 cut(s) | 1019 |
| NcoI | CCATGG | 1 cut(s) | 18 |
| NdeII | GATC | 2 cut(s) | 889, 951 |
| NlaIII | CATG | 9 cut(s) | 22, 57, 323, 407, 511, 728, 835, 937, 1027 |
| NlaIV | GGNNCC | 2 cut(s) | 760, 986 |
| NmuCI | GTSAC | 5 cut(s) | 98, 653, 709, 827, 1166 |
| NsiI | ATGCAT | 1 cut(s) | 1048 |
| NspI | RCATGY | 1 cut(s) | 937 |
| PceI | AGGCCT | 1 cut(s) | 611 |
| PciSI | GCTCTTC | 1 cut(s) | 794 |
| PdmI | GAANNNNTTC | 2 cut(s) | 67, 996 |
| PfeI | GAWTC | 2 cut(s) | 11, 203 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 59 |
| PfoI | TCCNGGA | 1 cut(s) | 492 |
| PkrI | GCNGC | 4 cut(s) | 223, 226, 678, 792 |
| PleI | GAGTC | 1 cut(s) | 532 |
| PpsI | GAGTC | 1 cut(s) | 532 |
| PpuMI | RGGWCCY | 1 cut(s) | 490 |
| PshAI | GACNNNNGTC | 1 cut(s) | 294 |
| Psp124BI | GAGCTC | 1 cut(s) | 882 |
| Psp5II | RGGWCCY | 1 cut(s) | 490 |
| Psp6I | CCWGG | 7 cut(s) | 88, 129, 266, 492, 657, 941, 1214 |
| PspFI | CCCAGC | 1 cut(s) | 217 |
| PspGI | CCWGG | 7 cut(s) | 88, 129, 266, 492, 657, 941, 1214 |
| PspN4I | GGNNCC | 2 cut(s) | 760, 986 |
| PspOMI | GGGCCC | 1 cut(s) | 984 |
| PspPI | GGNCC | 6 cut(s) | 244, 254, 490, 718, 984, 985 |
| PspPPI | RGGWCCY | 1 cut(s) | 490 |
| PstNI | CAGNNNCTG | 3 cut(s) | 224, 227, 493 |
| PsuI | RGATCY | 1 cut(s) | 889 |
| PvuII | CAGCTG | 1 cut(s) | 224 |
| RsaI | GTAC | 2 cut(s) | 760, 1115 |
| RsaNI | GTAC | 2 cut(s) | 759, 1114 |
| SacI | GAGCTC | 1 cut(s) | 882 |
| SapI | GCTCTTC | 1 cut(s) | 794 |
| SaqAI | TTAA | 6 cut(s) | 29, 545, 624, 780, 1179, 1249 |
| SatI | GCNGC | 4 cut(s) | 222, 225, 677, 791 |
| Sau3AI | GATC | 2 cut(s) | 889, 951 |
| Sau96I | GGNCC | 6 cut(s) | 244, 254, 490, 718, 984, 985 |
| SchI | GAGTC | 1 cut(s) | 533 |
| ScrFI | CCNGG | 8 cut(s) | 90, 131, 268, 494, 659, 943, 1019, 1216 |
| SduI | GDGCHC | 3 cut(s) | 882, 988, 1040 |
| SfaNI | GCATC | 5 cut(s) | 160, 361, 625, 1055, 1063 |
| SinI | GGWCC | 2 cut(s) | 244, 490 |
| SmlI | CTYRAG | 3 cut(s) | 28, 46, 881 |
| SmoI | CTYRAG | 3 cut(s) | 28, 46, 881 |
| SseBI | AGGCCT | 1 cut(s) | 611 |
| SsiI | CCGC | 2 cut(s) | 294, 1202 |
| SspMI | CTAG | 2 cut(s) | 504, 732 |
| SstI | GAGCTC | 1 cut(s) | 882 |
| StuI | AGGCCT | 1 cut(s) | 611 |
| StyD4I | CCNGG | 8 cut(s) | 88, 129, 266, 492, 657, 941, 1017, 1214 |
| StyI | CCWWGG | 1 cut(s) | 18 |
| TaaI | ACNGT | 1 cut(s) | 1166 |
| TaqI | TCGA | 1 cut(s) | 471 |
| TatI | WGTACW | 1 cut(s) | 1113 |
| TfiI | GAWTC | 2 cut(s) | 11, 203 |
| Tru1I | TTAA | 6 cut(s) | 29, 545, 624, 780, 1179, 1249 |
| Tru9I | TTAA | 6 cut(s) | 29, 545, 624, 780, 1179, 1249 |
| TscAI | CASTG | 1 cut(s) | 1109 |
| TseFI | GTSAC | 5 cut(s) | 98, 653, 709, 827, 1166 |
| TseI | GCWGC | 4 cut(s) | 221, 224, 676, 790 |
| Tsp45I | GTSAC | 5 cut(s) | 98, 653, 709, 827, 1166 |
| TspDTI | ATGAA | 5 cut(s) | 216, 405, 524, 713, 918 |
| TspRI | CASTG | 1 cut(s) | 1109 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 59 |
| Vha464I | CTTAAG | 1 cut(s) | 28 |
| VpaK11BI | GGWCC | 2 cut(s) | 244, 490 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 662, 704 |
| XceI | RCATGY | 1 cut(s) | 937 |
| XmnI | GAANNNNTTC | 2 cut(s) | 67, 996 |
| XspI | CTAG | 2 cut(s) | 504, 732 |
| Zsp2I | ATGCAT | 1 cut(s) | 1048 |