Topless-related protein 1-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LisH_TPL | PF17814 | 6 - 34 | 1.3e-06 | LisH-like dimerisation domain |
| TPR1-like_2nd | PF21889 | 38 - 161 | 2.3e-59 | TPR1-like, CTLH-containing domain |
| zf_topless | PF21359 | 165 - 205 | 8.4e-22 | TOPLESS, zinc finger domain |
| Beta-prop_WDR3_1st | PF25173 | 373 - 512 | 4.1e-13 | WDR3 first beta-propeller domain |
| WD40_CDC20-Fz | PF24807 | 389 - 546 | 5.6e-10 | CDC20/Fizzy WD40 domain |
| Beta-prop_WDR3_2nd | PF25172 | 390 - 549 | 2.8e-09 | WDR3 second beta-propeller domain |
| Beta-prop_WDR5 | PF25175 | 396 - 610 | 3.3e-20 | WDR5 beta-propeller domain |
| Beta-prop_THOC3 | PF25174 | 396 - 660 | 6.3e-23 | THOC3 beta-propeller domain |
| WD40_WDHD1_1st | PF24817 | 411 - 515 | 3.6e-08 | WDHD1 first WD40 domain |
| WD40_Gbeta | PF25391 | 428 - 644 | 5.6e-06 | G protein beta WD-40 repeat protein |
| Beta-prop_EML | PF23409 | 433 - 605 | 3.3e-06 | Echinoderm microtubule-associated protein first beta-propeller |
| WD40_Prp19 | PF24814 | 434 - 665 | 1.7e-18 | Prp19 WD40 domain |
| Beta-prop_EML_2 | PF23414 | 448 - 610 | 4.3e-08 | Echinoderm microtubule-associated protein second beta-propeller |
| Beta-prop_WDR90_POC16_2nd | PF23393 | 457 - 547 | 8.2e-07 | WDR90/POC16, second beta-propeller |
| Beta-prop_WDR3_1st | PF25173 | 502 - 612 | 3.9e-07 | WDR3 first beta-propeller domain |
| Beta-prop_WDR5 | PF25175 | 528 - 665 | 9.1e-09 | WDR5 beta-propeller domain |
| WD40_WDHD1_1st | PF24817 | 530 - 661 | 6e-06 | WDHD1 first WD40 domain |
| Beta-prop_WDR36-Utp21_2nd | PF25168 | 552 - 662 | 3e-07 | WDR36/Utp21 second beta-propeller domain |
| Beta-prop_EML_2 | PF23414 | 790 - 905 | 7.8e-10 | Echinoderm microtubule-associated protein second beta-propeller |
| Beta-prop_WDR3_2nd | PF25172 | 792 - 991 | 5.9e-11 | WDR3 second beta-propeller domain |
| Beta-prop_WDR5 | PF25175 | 792 - 992 | 1.1e-18 | WDR5 beta-propeller domain |
| WD40_WDHD1_1st | PF24817 | 795 - 993 | 3.3e-16 | WDHD1 first WD40 domain |
| WD40_CDC20-Fz | PF24807 | 796 - 904 | 2e-09 | CDC20/Fizzy WD40 domain |
| WD40_Prp19 | PF24814 | 799 - 985 | 1.3e-12 | Prp19 WD40 domain |
| Beta-prop_WDR36-Utp21_2nd | PF25168 | 801 - 899 | 4e-07 | WDR36/Utp21 second beta-propeller domain |
| Beta-prop_WDR3_1st | PF25173 | 801 - 899 | 1.9e-16 | WDR3 first beta-propeller domain |
| Beta-prop_IFT140_1st | PF23383 | 803 - 905 | 5.7e-09 | IFT140 first beta-propeller |
| Beta-prop_WDR36-Utp21_1st | PF25171 | 804 - 899 | 1.7e-09 | WDR36/Utp21 first beta-propeller |
| Beta-prop_WDR90_POC16_2nd | PF23393 | 809 - 903 | 1.1e-06 | WDR90/POC16, second beta-propeller |
| Beta-prop_THOC3 | PF25174 | 835 - 998 | 2.5e-09 | THOC3 beta-propeller domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 3122 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1922 |
| AatII | GACGTC | 1 cut(s) | 8 |
| Acc16I | TGCGCA | 1 cut(s) | 1964 |
| Acc36I | ACCTGC | 1 cut(s) | 2896 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1297 |
| AccBSI | CCGCTC | 1 cut(s) | 166 |
| AccI | GTMKAC | 2 cut(s) | 1430, 1852 |
| AccII | CGCG | 3 cut(s) | 317, 395, 2967 |
| AcsI | RAATTY | 4 cut(s) | 228, 619, 1929, 2736 |
| AcuI | CTGAAG | 8 cut(s) | 326, 1175, 1863, 1937, 2091, 2301, 2765, 3219 |
| AcvI | CACGTG | 1 cut(s) | 2625 |
| AcyI | GRCGYC | 1 cut(s) | 5 |
| AfaI | GTAC | 2 cut(s) | 107, 1219 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 298, 601, 902, 1297, 1730, 2421 |
| AflII | CTTAAG | 1 cut(s) | 443 |
| AflIII | ACRYGT | 2 cut(s) | 2624, 3166 |
| AjnI | CCWGG | 2 cut(s) | 850, 1576 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 455, 487 |
| AleI | CACNNNNGTG | 1 cut(s) | 281 |
| Alw21I | GWGCWC | 2 cut(s) | 141, 2368 |
| Alw26I | GTCTC | 3 cut(s) | 1189, 2003, 2481 |
| Alw44I | GTGCAC | 1 cut(s) | 2364 |
| Ama87I | CYCGRG | 1 cut(s) | 248 |
| AoxI | GGCC | 6 cut(s) | 459, 713, 1389, 1599, 3178, 3243 |
| ApaI | GGGCCC | 1 cut(s) | 717 |
| ApaLI | GTGCAC | 1 cut(s) | 2364 |
| ApeKI | GCWGC | 6 cut(s) | 547, 788, 953, 1451, 2891, 3062 |
| ApoI | RAATTY | 4 cut(s) | 228, 619, 1929, 2736 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 63, 218, 311 |
| AspLEI | GCGC | 2 cut(s) | 1965, 2967 |
| AspS9I | GGNCC | 7 cut(s) | 22, 604, 713, 714, 848, 981, 2130 |
| AsuC2I | CCSGG | 2 cut(s) | 1349, 1559 |
| AsuHPI | GGTGA | 5 cut(s) | 853, 1280, 1391, 2062, 2225 |
| AsuII | TTCGAA | 1 cut(s) | 1437 |
| AsuNHI | GCTAGC | 1 cut(s) | 730 |
| AvaI | CYCGRG | 1 cut(s) | 248 |
| AvaII | GGWCC | 5 cut(s) | 22, 604, 848, 981, 2130 |
| BaeGI | GKGCMC | 3 cut(s) | 717, 1472, 2368 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 227, 260 |
| BamHI | GGATCC | 3 cut(s) | 892, 1174, 2216 |
| BanII | GRGCYC | 3 cut(s) | 717, 1211, 1892 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 1836, 1868, 2740, 2772 |
| BauI | CACGAG | 2 cut(s) | 2819, 2933 |
| BbrPI | CACGTG | 1 cut(s) | 2625 |
| BbsI | GAAGAC | 1 cut(s) | 1943 |
| Bbv12I | GWGCWC | 2 cut(s) | 141, 2368 |
| BbvI | GCAGC | 6 cut(s) | 559, 800, 965, 1438, 2903, 3049 |
| BceAI | ACGGC | 2 cut(s) | 1439, 3193 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 1295, 1329, 1769, 1803, 2883, 2917 |
| BciT130I | CCWGG | 2 cut(s) | 852, 1578 |
| BciVI | GTATCC | 1 cut(s) | 1547 |
| BclI | TGATCA | 2 cut(s) | 36, 1167 |
| BcnI | CCSGG | 2 cut(s) | 1349, 1559 |
| BcoDI | GTCTC | 3 cut(s) | 1189, 2003, 2481 |
| BfmI | CTRYAG | 3 cut(s) | 1603, 2757, 2889 |
| BfrI | CTTAAG | 1 cut(s) | 443 |
| BfuAI | ACCTGC | 1 cut(s) | 2896 |
| BfuI | GTATCC | 1 cut(s) | 1547 |
| BglII | AGATCT | 1 cut(s) | 216 |
| BisI | GCNGC | 7 cut(s) | 548, 728, 789, 954, 1452, 2892, 3063 |
| BlpI | GCTNAGC | 4 cut(s) | 387, 1353, 2679, 2775 |
| BlsI | GCNGC | 7 cut(s) | 549, 729, 790, 955, 1453, 2893, 3064 |
| Bme1390I | CCNGG | 4 cut(s) | 852, 1349, 1559, 1578 |
| Bme18I | GGWCC | 5 cut(s) | 22, 604, 848, 981, 2130 |
| BmeT110I | CYCGRG | 1 cut(s) | 248 |
| BmgT120I | GGNCC | 7 cut(s) | 22, 604, 713, 714, 848, 981, 2130 |
| BmiI | GGNNCC | 7 cut(s) | 715, 849, 894, 1176, 1208, 2218, 2959 |
| BmrFI | CCNGG | 4 cut(s) | 852, 1349, 1559, 1578 |
| BmrI | ACTGGG | 2 cut(s) | 897, 1425 |
| BmtI | GCTAGC | 1 cut(s) | 734 |
| BmuI | ACTGGG | 2 cut(s) | 897, 1425 |
| BpiI | GAAGAC | 1 cut(s) | 1943 |
| BpmI | CTGGAG | 2 cut(s) | 720, 2439 |
| Bpu1102I | GCTNAGC | 4 cut(s) | 387, 1353, 2679, 2775 |
| Bpu14I | TTCGAA | 1 cut(s) | 1437 |
| BpuEI | CTTGAG | 2 cut(s) | 107, 2155 |
| BpuMI | CCSGG | 2 cut(s) | 1349, 1559 |
| Bsa29I | ATCGAT | 1 cut(s) | 1305 |
| BsaAI | YACGTR | 2 cut(s) | 1708, 2625 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2804 |
| BsaHI | GRCGYC | 1 cut(s) | 5 |
| BsaJI | CCNNGG | 2 cut(s) | 851, 2286 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2412, 2442 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 298, 601, 902, 1297, 1730, 2421 |
| Bse1I | ACTGG | 7 cut(s) | 737, 892, 1420, 1902, 2220, 2350, 3085 |
| Bse3DI | GCAATG | 1 cut(s) | 2769 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2804 |
| BseBI | CCWGG | 2 cut(s) | 852, 1578 |
| BseCI | ATCGAT | 1 cut(s) | 1305 |
| BseDI | CCNNGG | 2 cut(s) | 851, 2286 |
| BseJI | GATNNNNATC | 1 cut(s) | 2804 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 298, 601, 902, 1297, 1730, 2421 |
| BseMI | GCAATG | 1 cut(s) | 2769 |
| BseNI | ACTGG | 7 cut(s) | 737, 892, 1420, 1902, 2220, 2350, 3085 |
| BseRI | GAGGAG | 4 cut(s) | 347, 738, 813, 2060 |
| BseSI | GKGCMC | 3 cut(s) | 717, 1472, 2368 |
| BseXI | GCAGC | 6 cut(s) | 559, 800, 965, 1438, 2903, 3049 |
| BsgI | GTGCAG | 3 cut(s) | 657, 1629, 3048 |
| Bsh1236I | CGCG | 3 cut(s) | 317, 395, 2967 |
| BshFI | GGCC | 6 cut(s) | 461, 715, 1391, 1601, 3180, 3245 |
| BshVI | ATCGAT | 1 cut(s) | 1305 |
| BsiHKAI | GWGCWC | 2 cut(s) | 141, 2368 |
| BsiHKCI | CYCGRG | 1 cut(s) | 248 |
| BsiSI | CCGG | 2 cut(s) | 1349, 1558 |
| BslFI | GGGAC | 2 cut(s) | 1079, 1651 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 298, 601, 902, 1297, 1730, 2421 |
| BsmAI | GTCTC | 3 cut(s) | 1189, 2003, 2481 |
| BsmBI | CGTCTC | 1 cut(s) | 1189 |
| BsmFI | GGGAC | 2 cut(s) | 1079, 1651 |
| BsmI | GAATGC | 6 cut(s) | 550, 1337, 1411, 1459, 1869, 2322 |
| BsnI | GGCC | 6 cut(s) | 461, 715, 1391, 1601, 3180, 3245 |
| BsoBI | CYCGRG | 1 cut(s) | 248 |
| Bsp119I | TTCGAA | 1 cut(s) | 1437 |
| Bsp120I | GGGCCC | 1 cut(s) | 713 |
| Bsp1286I | GDGCHC | 6 cut(s) | 141, 717, 1211, 1472, 1892, 2368 |
| Bsp1720I | GCTNAGC | 4 cut(s) | 387, 1353, 2679, 2775 |
| Bsp68I | TCGCGA | 1 cut(s) | 395 |
| BspANI | GGCC | 6 cut(s) | 461, 715, 1391, 1601, 3180, 3245 |
| BspDI | ATCGAT | 1 cut(s) | 1305 |
| BspFNI | CGCG | 3 cut(s) | 317, 395, 2967 |
| BspHI | TCATGA | 1 cut(s) | 1444 |
| BspLI | GGNNCC | 7 cut(s) | 715, 849, 894, 1176, 1208, 2218, 2959 |
| BspMAI | CTGCAG | 1 cut(s) | 2893 |
| BspMI | ACCTGC | 1 cut(s) | 2896 |
| BspOI | GCTAGC | 1 cut(s) | 734 |
| BspT104I | TTCGAA | 1 cut(s) | 1437 |
| BspTI | CTTAAG | 1 cut(s) | 443 |
| BsrBI | CCGCTC | 1 cut(s) | 166 |
| BsrDI | GCAATG | 1 cut(s) | 2769 |
| BsrI | ACTGG | 7 cut(s) | 737, 892, 1420, 1902, 2220, 2350, 3085 |
| BssECI | CCNNGG | 2 cut(s) | 851, 2286 |
| BssNAI | GTATAC | 1 cut(s) | 1431 |
| BssNI | GRCGYC | 1 cut(s) | 5 |
| BssSI | CACGAG | 2 cut(s) | 2819, 2933 |
| BssT1I | CCWWGG | 1 cut(s) | 2286 |
| Bst1107I | GTATAC | 1 cut(s) | 1431 |
| Bst2BI | CACGAG | 2 cut(s) | 2819, 2933 |
| Bst2UI | CCWGG | 2 cut(s) | 852, 1578 |
| Bst4CI | ACNGT | 8 cut(s) | 489, 656, 973, 1688, 1919, 2723, 2962, 3115 |
| BstACI | GRCGYC | 1 cut(s) | 5 |
| BstAFI | CTTAAG | 1 cut(s) | 443 |
| BstBAI | YACGTR | 2 cut(s) | 1708, 2625 |
| BstBI | TTCGAA | 1 cut(s) | 1437 |
| BstC8I | GCNNGC | 6 cut(s) | 393, 732, 2271, 2907, 2930, 2944 |
| BstEII | GGTNACC | 1 cut(s) | 2290 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 296 |
| BstFNI | CGCG | 3 cut(s) | 317, 395, 2967 |
| BstHHI | GCGC | 2 cut(s) | 1965, 2967 |
| BstMAI | GTCTC | 3 cut(s) | 1189, 2003, 2481 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 392, 680, 950, 1607, 1641, 1907, 2207 |
| BstNI | CCWGG | 2 cut(s) | 852, 1578 |
| BstNSI | RCATGY | 1 cut(s) | 3170 |
| BstPI | GGTNACC | 1 cut(s) | 2290 |
| BstSCI | CCNGG | 4 cut(s) | 850, 1347, 1557, 1576 |
| BstSFI | CTRYAG | 3 cut(s) | 1603, 2757, 2889 |
| BstSLI | GKGCMC | 3 cut(s) | 717, 1472, 2368 |
| BstSNI | TACGTA | 1 cut(s) | 1708 |
| BstUI | CGCG | 3 cut(s) | 317, 395, 2967 |
| BstV1I | GCAGC | 6 cut(s) | 559, 800, 965, 1438, 2903, 3049 |
| BstV2I | GAAGAC | 1 cut(s) | 1943 |
| BstX2I | RGATCY | 8 cut(s) | 216, 301, 892, 1174, 2003, 2088, 2216, 2794 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 283, 1012, 2041 |
| BstYI | RGATCY | 8 cut(s) | 216, 301, 892, 1174, 2003, 2088, 2216, 2794 |
| BstZ17I | GTATAC | 1 cut(s) | 1431 |
| Bsu15I | ATCGAT | 1 cut(s) | 1305 |
| BsuI | GTATCC | 1 cut(s) | 1547 |
| BsuRI | GGCC | 6 cut(s) | 461, 715, 1391, 1601, 3180, 3245 |
| BsuTUI | ATCGAT | 1 cut(s) | 1305 |
| BtgZI | GCGATG | 1 cut(s) | 1794 |
| BtsI | GCAGTG | 3 cut(s) | 288, 946, 2876 |
| BtsIMutI | CAGTG | 4 cut(s) | 288, 946, 2227, 2876 |
| BtuMI | TCGCGA | 1 cut(s) | 395 |
| BveI | ACCTGC | 1 cut(s) | 2896 |
| Cac8I | GCNNGC | 6 cut(s) | 393, 732, 2271, 2907, 2930, 2944 |
| CciI | TCATGA | 1 cut(s) | 1444 |
| CfoI | GCGC | 2 cut(s) | 1965, 2967 |
| Cfr13I | GGNCC | 7 cut(s) | 22, 604, 713, 714, 848, 981, 2130 |
| ClaI | ATCGAT | 1 cut(s) | 1305 |
| CseI | GACGC | 1 cut(s) | 1171 |
| Csp6I | GTAC | 2 cut(s) | 106, 1218 |
| CviQI | GTAC | 2 cut(s) | 106, 1218 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1922 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1922 |
| Eco105I | TACGTA | 1 cut(s) | 1708 |
| Eco130I | CCWWGG | 1 cut(s) | 2286 |
| Eco147I | AGGCCT | 1 cut(s) | 3245 |
| Eco24I | GRGCYC | 3 cut(s) | 717, 1211, 1892 |
| Eco32I | GATATC | 3 cut(s) | 289, 765, 1132 |
| Eco47I | GGWCC | 5 cut(s) | 22, 604, 848, 981, 2130 |
| Eco57I | CTGAAG | 8 cut(s) | 326, 1175, 1863, 1937, 2091, 2301, 2765, 3219 |
| Eco72I | CACGTG | 1 cut(s) | 2625 |
| Eco88I | CYCGRG | 1 cut(s) | 248 |
| Eco91I | GGTNACC | 1 cut(s) | 2290 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 296 |
| EcoO109I | RGGNCCY | 3 cut(s) | 22, 714, 848 |
| EcoO65I | GGTNACC | 1 cut(s) | 2290 |
| EcoRI | GAATTC | 2 cut(s) | 619, 2736 |
| EcoRII | CCWGG | 2 cut(s) | 850, 1576 |
| EcoRV | GATATC | 3 cut(s) | 289, 765, 1132 |
| EcoT14I | CCWWGG | 1 cut(s) | 2286 |
| EcoT38I | GRGCYC | 3 cut(s) | 717, 1211, 1892 |
| ErhI | CCWWGG | 1 cut(s) | 2286 |
| Esp3I | CGTCTC | 1 cut(s) | 1189 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 206, 238, 2488, 2520, 2763, 2795 |
| FaqI | GGGAC | 2 cut(s) | 1079, 1651 |
| FauI | CCCGC | 3 cut(s) | 310, 1628, 2304 |
| FbaI | TGATCA | 2 cut(s) | 36, 1167 |
| FblI | GTMKAC | 2 cut(s) | 1430, 1852 |
| Fnu4HI | GCNGC | 7 cut(s) | 548, 728, 789, 954, 1452, 2892, 3063 |
| FriOI | GRGCYC | 3 cut(s) | 717, 1211, 1892 |
| Fsp4HI | GCNGC | 7 cut(s) | 548, 728, 789, 954, 1452, 2892, 3063 |
| FspAI | RTGCGCAY | 1 cut(s) | 1964 |
| FspI | TGCGCA | 1 cut(s) | 1964 |
| GlaI | GCGC | 2 cut(s) | 1964, 2966 |
| GluI | GCNGC | 7 cut(s) | 548, 728, 789, 954, 1452, 2892, 3063 |
| GsuI | CTGGAG | 2 cut(s) | 720, 2439 |
| HaeIII | GGCC | 6 cut(s) | 461, 715, 1391, 1601, 3180, 3245 |
| HapII | CCGG | 2 cut(s) | 1349, 1558 |
| HgaI | GACGC | 1 cut(s) | 1171 |
| HhaI | GCGC | 2 cut(s) | 1965, 2967 |
| Hin1I | GRCGYC | 1 cut(s) | 5 |
| Hin6I | GCGC | 2 cut(s) | 1963, 2965 |
| HinP1I | GCGC | 2 cut(s) | 1963, 2965 |
| HincII | GTYRAC | 3 cut(s) | 2178, 2412, 2828 |
| HindII | GTYRAC | 3 cut(s) | 2178, 2412, 2828 |
| HindIII | AAGCTT | 4 cut(s) | 535, 2597, 2944, 3205 |
| HpaII | CCGG | 2 cut(s) | 1349, 1558 |
| HphI | GGTGA | 5 cut(s) | 853, 1280, 1391, 2062, 2225 |
| HpyCH4III | ACNGT | 8 cut(s) | 489, 656, 973, 1688, 1919, 2723, 2962, 3115 |
| HpyCH4IV | ACGT | 3 cut(s) | 5, 1707, 2624 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 392, 680, 950, 1607, 1641, 1907, 2207 |
| HpySE526I | ACGT | 3 cut(s) | 5, 1707, 2624 |
| Hsp92I | GRCGYC | 1 cut(s) | 5 |
| HspAI | GCGC | 2 cut(s) | 1963, 2965 |
| Ksp22I | TGATCA | 2 cut(s) | 36, 1167 |
| LmnI | GCTCC | 6 cut(s) | 360, 739, 1136, 1206, 1579, 2669 |
| Lsp1109I | GCAGC | 6 cut(s) | 559, 800, 965, 1438, 2903, 3049 |
| MaeII | ACGT | 3 cut(s) | 5, 1707, 2624 |
| MaeIII | GTNAC | 8 cut(s) | 45, 398, 476, 1580, 2247, 2290, 2606, 2620 |
| MbiI | CCGCTC | 1 cut(s) | 166 |
| MboII | GAAGA | 9 cut(s) | 211, 226, 319, 341, 686, 1943, 2084, 2894, 2975 |
| MflI | RGATCY | 8 cut(s) | 216, 301, 892, 1174, 2003, 2088, 2216, 2794 |
| MhlI | GDGCHC | 6 cut(s) | 141, 717, 1211, 1472, 1892, 2368 |
| MlyI | GAGTC | 4 cut(s) | 2628, 2746, 2833, 2837 |
| MmeI | TCCRAC | 2 cut(s) | 745, 1030 |
| MroXI | GAANNNNTTC | 3 cut(s) | 63, 218, 311 |
| MslI | CAYNNNNRTG | 6 cut(s) | 281, 1010, 1397, 1595, 2327, 2514 |
| MspA1I | CMGCKG | 2 cut(s) | 661, 1957 |
| MspCI | CTTAAG | 1 cut(s) | 443 |
| MspI | CCGG | 2 cut(s) | 1349, 1558 |
| MspR9I | CCNGG | 4 cut(s) | 852, 1349, 1559, 1578 |
| Mva1269I | GAATGC | 6 cut(s) | 550, 1337, 1411, 1459, 1869, 2322 |
| MvaI | CCWGG | 2 cut(s) | 852, 1578 |
| MvnI | CGCG | 3 cut(s) | 317, 395, 2967 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 392, 680, 950, 1607, 1641, 1907, 2207 |
| NciI | CCSGG | 2 cut(s) | 1349, 1559 |
| NheI | GCTAGC | 1 cut(s) | 730 |
| NlaIV | GGNNCC | 7 cut(s) | 715, 849, 894, 1176, 1208, 2218, 2959 |
| NmuCI | GTSAC | 5 cut(s) | 476, 1580, 2247, 2606, 2620 |
| NruI | TCGCGA | 1 cut(s) | 395 |
| NsbI | TGCGCA | 1 cut(s) | 1964 |
| NspI | RCATGY | 1 cut(s) | 3170 |
| NspV | TTCGAA | 1 cut(s) | 1437 |
| OliI | CACNNNNGTG | 1 cut(s) | 281 |
| PaeR7I | CTCGAG | 1 cut(s) | 248 |
| PagI | TCATGA | 1 cut(s) | 1444 |
| PceI | AGGCCT | 1 cut(s) | 3245 |
| PciI | ACATGT | 1 cut(s) | 3166 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 3132 |
| PctI | GAATGC | 6 cut(s) | 550, 1337, 1411, 1459, 1869, 2322 |
| PdmI | GAANNNNTTC | 3 cut(s) | 63, 218, 311 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1297 |
| PkrI | GCNGC | 7 cut(s) | 549, 729, 790, 955, 1453, 2893, 3064 |
| PleI | GAGTC | 4 cut(s) | 2627, 2746, 2832, 2837 |
| PmaCI | CACGTG | 1 cut(s) | 2625 |
| PmlI | CACGTG | 1 cut(s) | 2625 |
| PpsI | GAGTC | 4 cut(s) | 2627, 2746, 2832, 2837 |
| Ppu21I | YACGTR | 2 cut(s) | 1708, 2625 |
| PpuMI | RGGWCCY | 2 cut(s) | 22, 848 |
| PscI | ACATGT | 1 cut(s) | 3166 |
| PsiI | TTATAA | 1 cut(s) | 3122 |
| Psp5II | RGGWCCY | 2 cut(s) | 22, 848 |
| Psp6I | CCWGG | 2 cut(s) | 850, 1576 |
| PspCI | CACGTG | 1 cut(s) | 2625 |
| PspEI | GGTNACC | 1 cut(s) | 2290 |
| PspGI | CCWGG | 2 cut(s) | 850, 1576 |
| PspN4I | GGNNCC | 7 cut(s) | 715, 849, 894, 1176, 1208, 2218, 2959 |
| PspOMI | GGGCCC | 1 cut(s) | 713 |
| PspPI | GGNCC | 7 cut(s) | 22, 604, 713, 714, 848, 981, 2130 |
| PspPPI | RGGWCCY | 2 cut(s) | 22, 848 |
| PstI | CTGCAG | 1 cut(s) | 2893 |
| PsuI | RGATCY | 8 cut(s) | 216, 301, 892, 1174, 2003, 2088, 2216, 2794 |
| PvuII | CAGCTG | 2 cut(s) | 661, 1957 |
| RruI | TCGCGA | 1 cut(s) | 395 |
| RsaI | GTAC | 2 cut(s) | 107, 1219 |
| RsaNI | GTAC | 2 cut(s) | 106, 1218 |
| RseI | CAYNNNNRTG | 6 cut(s) | 281, 1010, 1397, 1595, 2327, 2514 |
| SatI | GCNGC | 7 cut(s) | 548, 728, 789, 954, 1452, 2892, 3063 |
| Sau96I | GGNCC | 7 cut(s) | 22, 604, 713, 714, 848, 981, 2130 |
| SchI | GAGTC | 4 cut(s) | 2628, 2746, 2833, 2837 |
| ScrFI | CCNGG | 4 cut(s) | 852, 1349, 1559, 1578 |
| SduI | GDGCHC | 6 cut(s) | 141, 717, 1211, 1472, 1892, 2368 |
| SfcI | CTRYAG | 3 cut(s) | 1603, 2757, 2889 |
| Sfr274I | CTCGAG | 1 cut(s) | 248 |
| SfuI | TTCGAA | 1 cut(s) | 1437 |
| SinI | GGWCC | 5 cut(s) | 22, 604, 848, 981, 2130 |
| SlaI | CTCGAG | 1 cut(s) | 248 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 281, 1010, 1397, 1595, 2327, 2514 |
| SmlI | CTYRAG | 4 cut(s) | 86, 248, 443, 2134 |
| SmoI | CTYRAG | 4 cut(s) | 86, 248, 443, 2134 |
| SnaBI | TACGTA | 1 cut(s) | 1708 |
| SseBI | AGGCCT | 1 cut(s) | 3245 |
| SspI | AATATT | 1 cut(s) | 1822 |
| StuI | AGGCCT | 1 cut(s) | 3245 |
| StyD4I | CCNGG | 4 cut(s) | 850, 1347, 1557, 1576 |
| StyI | CCWWGG | 1 cut(s) | 2286 |
| TaaI | ACNGT | 8 cut(s) | 489, 656, 973, 1688, 1919, 2723, 2962, 3115 |
| TaiI | ACGT | 3 cut(s) | 8, 1710, 2627 |
| TatI | WGTACW | 1 cut(s) | 105 |
| TauI | GCSGC | 1 cut(s) | 730 |
| TscAI | CASTG | 4 cut(s) | 288, 946, 2227, 2876 |
| TseFI | GTSAC | 5 cut(s) | 476, 1580, 2247, 2606, 2620 |
| TseI | GCWGC | 6 cut(s) | 547, 788, 953, 1451, 2891, 3062 |
| Tsp45I | GTSAC | 5 cut(s) | 476, 1580, 2247, 2606, 2620 |
| TspGWI | ACGGA | 1 cut(s) | 464 |
| TspRI | CASTG | 4 cut(s) | 288, 946, 2227, 2876 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1297 |
| Vha464I | CTTAAG | 1 cut(s) | 443 |
| VneI | GTGCAC | 1 cut(s) | 2364 |
| VpaK11BI | GGWCC | 5 cut(s) | 22, 604, 848, 981, 2130 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 296 |
| XapI | RAATTY | 4 cut(s) | 228, 619, 1929, 2736 |
| XceI | RCATGY | 1 cut(s) | 3170 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 433, 2209 |
| XhoI | CTCGAG | 1 cut(s) | 248 |
| XmiI | GTMKAC | 2 cut(s) | 1430, 1852 |
| XmnI | GAANNNNTTC | 3 cut(s) | 63, 218, 311 |
| ZraI | GACGTC | 1 cut(s) | 6 |