AT2G05180

cytochrome P450

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Forward (+)
1875390 .. 1876794
1405 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G05180.1

Sequence Viewer

Length: 1329 bp
ATGGCAGCAATTCTCAGCGTTGACTTTCAGAACTGTTTCATCTTCATCGTCCTATGCCTCTTCTCACTCTTCTGTTACTCTCTCTTCTTCAAGAAACCAAAGCACCCGCGAGGCTGTGATCTTCCTCCTAGCCCTCCTTCTCTTCCAATCATCGGTCATCTTCACCTTCTCTTCTCTCCTCTAACCCACAAGTCTCTTCAGAAACTCTCCTCTAAGTATGGACATCTACTCCATCTACGGATCTTTAATGTCCCAGTCATTCTCGTCTCTTCAGCCTCTGTTGCCTACGAGATCTTCAGGGCTCATGACGTGAACGTCTCCTCTCGCGGTGTTGCTGCAATCGATGAGTCCCTCCTGTTTGGATCTTCTGGCATCATTACCGCTCCTTATGGAGATTACTGGAAGTTCATGAAGAAGCTAATCGCCACTAAGCTGCTCCGACCTCAGTCACTCGAGAGTTCACGAGGTATCCGTGGTGAAGAGCTAACGCGATTTTACAACAGCCTTCTCGATAAGGCGAGGATGACTGAGAGCGTTGAGATCAGTACTGAAGCAATGAAGCTTGTGAACAACACCTTGTGCAGGATGAGCATGGGAAGAAGTTTTTCAGAGGAGAACGGTGAGGCAGAGAAAATCAGGGGATTAGTGGGTGAATCTTATGCCTTGACCAAGAAGATGTTCCTGGCATCTTTATTGCGCAAGCCGCTAAAGAAGCTTCGGATCTCACTATTCGAGAAGGAGATAATGGGTGTTTCTGACAGATTAGATGAGCTGCTAGAGAGAATTCTTGTGGAACACGAAGAGAAACTACACGAGGAGCATCAAGGTACTGATATGATGGATGTGTTGTTGGCAGCTTCTGGAGATGAAAACGCAGAGTATAACATCACTAGGAATCATATCAAGTCATTTTTCGTGGAGATTTTTATTGGAGCCACTGATACCTCAGTGCAAACAACACAATGGACAATGGCGGAGATCCTTAACCACCCTAACGTTCTTGAGAGACTGAGGAAAGACATTGATTCCGTTGTAGGGAAAACAAGGTTGATTCATGAAACAGATCTACCGAACCTCCCTTACTTGCAAGCGGTAGTCAAAGAAGGGCTAAGATTGCATCCACCGGGACCTCTCTTGGTAAGGACGTTCCAAGAAAGATGCAAGATCAAAGGTTTCTACATACCAGAGAAGACAACACTCGTTATCAATGCTTACGCTGTTATGAGAGATCCTGATTCTTGGGAAGATCCTGACGAGTTCAAGCCAGAGAGGTTTCTAAGAGCACCTCCAATGGGAGGCTCTCTTGACAAATTCATAGAGTTCTCTTGA

Protein Analysis

442

Amino Acids

50.25

Weight (kDa)

7.24

Isoelectric Point (pI)

39.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 42 - 428 8.4e-76 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 314
Acc16I TGCGCA 1 cut(s) 698
AccBSI CCGCTC 1 cut(s) 383
AccII CGCG 3 cut(s) 109, 327, 490
AciI CCGC 6 cut(s) 107, 327, 381, 704, 974, 1091
AclI AACGTT 1 cut(s) 996
AclWI GGATC 6 cut(s) 248, 370, 728, 973, 1223, 1241
AcsI RAATTY 2 cut(s) 783, 1310
AcuI CTGAAG 4 cut(s) 182, 255, 280, 570
AdeI CACNNNGTG 1 cut(s) 579
AfaI GTAC 2 cut(s) 547, 829
AfiI CCNNNNNNNGG 5 cut(s) 152, 582, 1035, 1292, 1295
AgsI TTSAA 2 cut(s) 91, 1261
AjiI CACGTC 1 cut(s) 310
AjnI CCWGG 1 cut(s) 681
AjuI GAANNNNNNNTTGG 2 cut(s) 662, 694
AluBI AGCT 7 cut(s) 418, 433, 484, 562, 715, 772, 857
AluI AGCT 7 cut(s) 418, 433, 484, 562, 715, 772, 857
Alw21I GWGCWC 1 cut(s) 1285
Alw26I GTCTC 4 cut(s) 198, 271, 322, 1000
AlwI GGATC 6 cut(s) 248, 370, 728, 973, 1223, 1241
AlwNI CAGNNNCTG 2 cut(s) 278, 860
Ama87I CYCGRG 1 cut(s) 452
ApeKI GCWGC 5 cut(s) 5, 335, 433, 772, 854
ApoI RAATTY 2 cut(s) 783, 1310
Asp700I GAANNNNTTC 3 cut(s) 35, 604, 677
AspLEI GCGC 1 cut(s) 699
AspS9I GGNCC 1 cut(s) 1127
AsuC2I CCSGG 1 cut(s) 1125
AsuHPI GGTGA 4 cut(s) 155, 488, 632, 662
AvaI CYCGRG 1 cut(s) 452
AvaII GGWCC 1 cut(s) 1127
BaeI ACNNNNGTAYC 2 cut(s) 933, 966
BanII GRGCYC 1 cut(s) 304
BarI GAAGNNNNNNTAC 2 cut(s) 792, 824
BauI CACGAG 2 cut(s) 462, 812
BbsI GAAGAC 1 cut(s) 1196
Bbv12I GWGCWC 1 cut(s) 1285
BbvI GCAGC 5 cut(s) 17, 322, 420, 759, 866
BccI CCATC 2 cut(s) 240, 832
BciT130I CCWGG 1 cut(s) 683
BciVI GTATCC 1 cut(s) 479
BcnI CCSGG 1 cut(s) 1125
BcoDI GTCTC 4 cut(s) 198, 271, 322, 1000
BfaI CTAG 3 cut(s) 129, 776, 891
BfuI GTATCC 1 cut(s) 479
BglII AGATCT 2 cut(s) 291, 1063
BisI GCNGC 6 cut(s) 6, 336, 434, 704, 773, 855
BlsI GCNGC 6 cut(s) 7, 337, 435, 705, 774, 856
BmcAI AGTACT 1 cut(s) 547
Bme1390I CCNGG 2 cut(s) 683, 1125
Bme18I GGWCC 1 cut(s) 1127
BmeT110I CYCGRG 1 cut(s) 452
BmgBI CACGTC 1 cut(s) 310
BmgT120I GGNCC 1 cut(s) 1127
BmiI GGNNCC 2 cut(s) 934, 1128
BmrFI CCNGG 2 cut(s) 683, 1125
BmrI ACTGGG 1 cut(s) 248
BmsI GCATC 5 cut(s) 381, 695, 829, 1126, 1148
BmuI ACTGGG 1 cut(s) 248
BoxI GACNNNNGTC 1 cut(s) 445
BpiI GAAGAC 1 cut(s) 1196
BpmI CTGGAG 1 cut(s) 882
BpuEI CTTGAG 1 cut(s) 1022
BpuMI CCSGG 1 cut(s) 1125
Bsa29I ATCGAT 1 cut(s) 342
BsaJI CCNNGG 1 cut(s) 472
BsaXI ACNNNNNCTCC 4 cut(s) 213, 243, 1059, 1089
Bsc4I CCNNNNNNNGG 5 cut(s) 152, 582, 1035, 1292, 1295
Bse1I ACTGG 2 cut(s) 254, 404
Bse3DI GCAATG 1 cut(s) 561
BseBI CCWGG 1 cut(s) 683
BseCI ATCGAT 1 cut(s) 342
BseDI CCNNGG 1 cut(s) 472
BseGI GGATG 4 cut(s) 528, 591, 847, 1117
BseLI CCNNNNNNNGG 5 cut(s) 152, 582, 1035, 1292, 1295
BseMI GCAATG 1 cut(s) 561
BseMII CTCAG 5 cut(s) 28, 458, 519, 960, 1001
BseNI ACTGG 2 cut(s) 254, 404
BseRI GAGGAG 5 cut(s) 168, 199, 310, 626, 830
BseXI GCAGC 5 cut(s) 17, 322, 420, 759, 866
BsgI GTGCAG 1 cut(s) 601
Bsh1236I CGCG 3 cut(s) 109, 327, 490
BshVI ATCGAT 1 cut(s) 342
BsiHKAI GWGCWC 1 cut(s) 1285
BsiHKCI CYCGRG 1 cut(s) 452
BsiSI CCGG 1 cut(s) 1124
BslFI GGGAC 3 cut(s) 236, 334, 1140
BslI CCNNNNNNNGG 5 cut(s) 152, 582, 1035, 1292, 1295
BsmAI GTCTC 4 cut(s) 198, 271, 322, 1000
BsmBI CGTCTC 2 cut(s) 271, 322
BsmFI GGGAC 3 cut(s) 236, 334, 1140
BsoBI CYCGRG 1 cut(s) 452
Bsp1286I GDGCHC 2 cut(s) 304, 1285
BspACI CCGC 6 cut(s) 107, 327, 381, 704, 974, 1091
BspCNI CTCAG 5 cut(s) 27, 457, 520, 959, 1002
BspDI ATCGAT 1 cut(s) 342
BspFNI CGCG 3 cut(s) 109, 327, 490
BspHI TCATGA 3 cut(s) 304, 408, 1054
BspLI GGNNCC 2 cut(s) 934, 1128
BspPI GGATC 6 cut(s) 248, 370, 728, 973, 1223, 1241
BspQI GCTCTTC 1 cut(s) 474
BsrBI CCGCTC 1 cut(s) 383
BsrDI GCAATG 1 cut(s) 561
BsrI ACTGG 2 cut(s) 254, 404
BssECI CCNNGG 1 cut(s) 472
BssSI CACGAG 2 cut(s) 462, 812
Bst2BI CACGAG 2 cut(s) 462, 812
Bst2UI CCWGG 1 cut(s) 683
Bst4CI ACNGT 2 cut(s) 35, 620
Bst6I CTCTTC 9 cut(s) 65, 74, 89, 147, 176, 201, 274, 474, 795
BstC8I GCNNGC 2 cut(s) 701, 1089
BstDEI CTNAG 9 cut(s) 14, 213, 429, 444, 528, 946, 1010, 1109, 1277
BstDSI CCRYGG 1 cut(s) 472
BstENI CCTNNNNNAGG 1 cut(s) 580
BstF5I GGATG 4 cut(s) 528, 591, 847, 1117
BstFNI CGCG 3 cut(s) 109, 327, 490
BstHHI GCGC 1 cut(s) 699
BstMAI GTCTC 4 cut(s) 198, 271, 322, 1000
BstMWI GCNNNNNNNGC 5 cut(s) 281, 588, 703, 712, 1114
BstNI CCWGG 1 cut(s) 683
BstPAI GACNNNNGTC 1 cut(s) 445
BstSCI CCNGG 2 cut(s) 681, 1123
BstUI CGCG 3 cut(s) 109, 327, 490
BstV1I GCAGC 5 cut(s) 17, 322, 420, 759, 866
BstV2I GAAGAC 1 cut(s) 1196
BstX2I RGATCY 8 cut(s) 240, 291, 362, 720, 978, 1063, 1228, 1246
BstYI RGATCY 8 cut(s) 240, 291, 362, 720, 978, 1063, 1228, 1246
Bsu15I ATCGAT 1 cut(s) 342
BsuI GTATCC 1 cut(s) 479
BsuTUI ATCGAT 1 cut(s) 342
BtgI CCRYGG 1 cut(s) 472
BtrI CACGTC 1 cut(s) 310
BtsCI GGATG 4 cut(s) 528, 591, 847, 1117
BtsIMutI CAGTG 2 cut(s) 936, 954
Cac8I GCNNGC 2 cut(s) 701, 1089
CaiI CAGNNNCTG 2 cut(s) 278, 860
CciI TCATGA 3 cut(s) 304, 408, 1054
CfoI GCGC 1 cut(s) 699
Cfr13I GGNCC 1 cut(s) 1127
ClaI ATCGAT 1 cut(s) 342
Csp6I GTAC 2 cut(s) 546, 828
CviAII CATG 4 cut(s) 305, 409, 592, 1055
CviQI GTAC 2 cut(s) 546, 828
DdeI CTNAG 9 cut(s) 14, 213, 429, 444, 528, 946, 1010, 1109, 1277
DraIII CACNNNGTG 1 cut(s) 579
DrdI GACNNNNNNGTC 1 cut(s) 314
DseDI GACNNNNNNGTC 1 cut(s) 314
Eam1104I CTCTTC 9 cut(s) 65, 74, 89, 147, 176, 201, 274, 474, 795
EarI CTCTTC 9 cut(s) 65, 74, 89, 147, 176, 201, 274, 474, 795
EciI GGCGGA 1 cut(s) 989
Eco24I GRGCYC 1 cut(s) 304
Eco47I GGWCC 1 cut(s) 1127
Eco57I CTGAAG 4 cut(s) 182, 255, 280, 570
Eco88I CYCGRG 1 cut(s) 452
EcoNI CCTNNNNNAGG 1 cut(s) 580
EcoO109I RGGNCCY 1 cut(s) 1127
EcoRI GAATTC 1 cut(s) 783
EcoRII CCWGG 1 cut(s) 681
EcoT38I GRGCYC 1 cut(s) 304
Esp3I CGTCTC 2 cut(s) 271, 322
FaeI CATG 4 cut(s) 308, 412, 595, 1058
FaqI GGGAC 3 cut(s) 236, 334, 1140
FatI CATG 4 cut(s) 304, 408, 591, 1054
FauI CCCGC 1 cut(s) 114
Fnu4HI GCNGC 6 cut(s) 6, 336, 434, 704, 773, 855
FokI GGATG 4 cut(s) 535, 598, 854, 1104
FriOI GRGCYC 1 cut(s) 304
Fsp4HI GCNGC 6 cut(s) 6, 336, 434, 704, 773, 855
FspBI CTAG 3 cut(s) 129, 776, 891
FspI TGCGCA 1 cut(s) 698
GlaI GCGC 1 cut(s) 698
GluI GCNGC 6 cut(s) 6, 336, 434, 704, 773, 855
GsuI CTGGAG 1 cut(s) 882
HapII CCGG 1 cut(s) 1124
HhaI GCGC 1 cut(s) 699
Hin1II CATG 4 cut(s) 308, 412, 595, 1058
Hin6I GCGC 1 cut(s) 697
HinP1I GCGC 1 cut(s) 697
HincII GTYRAC 1 cut(s) 22
HindII GTYRAC 1 cut(s) 22
HindIII AAGCTT 2 cut(s) 560, 713
HinfI GANTC 6 cut(s) 347, 653, 895, 1025, 1051, 1235
HpaII CCGG 1 cut(s) 1124
HphI GGTGA 4 cut(s) 155, 488, 632, 662
Hpy166II GTNNAC 4 cut(s) 22, 313, 461, 568
Hpy188I TCNGA 6 cut(s) 30, 201, 440, 610, 720, 757
Hpy8I GTNNAC 4 cut(s) 22, 313, 461, 568
HpyAV CCTTC 5 cut(s) 147, 176, 515, 730, 1097
HpyCH4III ACNGT 2 cut(s) 35, 620
HpyCH4IV ACGT 4 cut(s) 309, 315, 996, 1145
HpyCH4V TGCA 6 cut(s) 338, 582, 952, 1087, 1117, 1161
HpyF10VI GCNNNNNNNGC 5 cut(s) 281, 588, 703, 712, 1114
HpyF3I CTNAG 9 cut(s) 14, 213, 429, 444, 528, 946, 1010, 1109, 1277
HpySE526I ACGT 4 cut(s) 309, 315, 996, 1145
Hsp92II CATG 4 cut(s) 308, 412, 595, 1058
HspAI GCGC 1 cut(s) 697
LguI GCTCTTC 1 cut(s) 474
LmnI GCTCC 4 cut(s) 388, 441, 817, 932
Lsp1109I GCAGC 5 cut(s) 17, 322, 420, 759, 866
LweI GCATC 5 cut(s) 381, 695, 829, 1126, 1148
MaeI CTAG 3 cut(s) 129, 776, 891
MaeII ACGT 4 cut(s) 309, 315, 996, 1145
MaeIII GTNAC 2 cut(s) 74, 447
MbiI CCGCTC 1 cut(s) 383
MflI RGATCY 8 cut(s) 240, 291, 362, 720, 978, 1063, 1228, 1246
MhlI GDGCHC 2 cut(s) 304, 1285
MluCI AATT 3 cut(s) 9, 783, 1310
MlyI GAGTC 1 cut(s) 356
MmeI TCCRAC 1 cut(s) 463
MroXI GAANNNNTTC 3 cut(s) 35, 604, 677
MseI TTAA 2 cut(s) 246, 984
MspI CCGG 1 cut(s) 1124
MspR9I CCNGG 2 cut(s) 683, 1125
MvaI CCWGG 1 cut(s) 683
MvnI CGCG 3 cut(s) 109, 327, 490
MwoI GCNNNNNNNGC 5 cut(s) 281, 588, 703, 712, 1114
NciI CCSGG 1 cut(s) 1125
NlaIII CATG 4 cut(s) 308, 412, 595, 1058
NlaIV GGNNCC 2 cut(s) 934, 1128
NmuCI GTSAC 1 cut(s) 447
NsbI TGCGCA 1 cut(s) 698
PaeR7I CTCGAG 1 cut(s) 452
PagI TCATGA 3 cut(s) 304, 408, 1054
PciSI GCTCTTC 1 cut(s) 474
PcsI WCGNNNNNNNCGW 1 cut(s) 469
PdmI GAANNNNTTC 3 cut(s) 35, 604, 677
PfeI GAWTC 5 cut(s) 653, 895, 1025, 1051, 1235
PkrI GCNGC 6 cut(s) 7, 337, 435, 705, 774, 856
PleI GAGTC 1 cut(s) 355
PpsI GAGTC 1 cut(s) 355
PpuMI RGGWCCY 1 cut(s) 1127
PshAI GACNNNNGTC 1 cut(s) 445
Psp1406I AACGTT 1 cut(s) 996
Psp5II RGGWCCY 1 cut(s) 1127
Psp6I CCWGG 1 cut(s) 681
PspGI CCWGG 1 cut(s) 681
PspN4I GGNNCC 2 cut(s) 934, 1128
PspPI GGNCC 1 cut(s) 1127
PspPPI RGGWCCY 1 cut(s) 1127
PsrI GAACNNNNNNTAC 2 cut(s) 1064, 1096
PstNI CAGNNNCTG 2 cut(s) 278, 860
PsuI RGATCY 8 cut(s) 240, 291, 362, 720, 978, 1063, 1228, 1246
RsaI GTAC 2 cut(s) 547, 829
RsaNI GTAC 2 cut(s) 546, 828
SapI GCTCTTC 1 cut(s) 474
SaqAI TTAA 2 cut(s) 246, 984
SatI GCNGC 6 cut(s) 6, 336, 434, 704, 773, 855
Sau96I GGNCC 1 cut(s) 1127
ScaI AGTACT 1 cut(s) 547
SchI GAGTC 1 cut(s) 356
ScrFI CCNGG 2 cut(s) 683, 1125
SduI GDGCHC 2 cut(s) 304, 1285
SfaNI GCATC 5 cut(s) 381, 695, 829, 1126, 1148
Sfr274I CTCGAG 1 cut(s) 452
SinI GGWCC 1 cut(s) 1127
SlaI CTCGAG 1 cut(s) 452
SmlI CTYRAG 2 cut(s) 452, 1001
SmoI CTYRAG 2 cut(s) 452, 1001
Sse9I AATT 3 cut(s) 9, 783, 1310
SsiI CCGC 6 cut(s) 107, 327, 381, 704, 974, 1091
SspMI CTAG 3 cut(s) 129, 776, 891
StyD4I CCNGG 2 cut(s) 681, 1123
TaaI ACNGT 2 cut(s) 35, 620
TaiI ACGT 4 cut(s) 312, 318, 999, 1148
TaqI TCGA 4 cut(s) 342, 453, 510, 732
TaqII GACCGA 1 cut(s) 143
TasI AATT 3 cut(s) 9, 783, 1310
TatI WGTACW 1 cut(s) 545
TauI GCSGC 1 cut(s) 706
TfiI GAWTC 5 cut(s) 653, 895, 1025, 1051, 1235
Tru1I TTAA 2 cut(s) 246, 984
Tru9I TTAA 2 cut(s) 246, 984
TscAI CASTG 2 cut(s) 943, 954
TseFI GTSAC 1 cut(s) 447
TseI GCWGC 5 cut(s) 5, 335, 433, 772, 854
Tsp45I GTSAC 1 cut(s) 447
TspDTI ATGAA 9 cut(s) 28, 34, 397, 425, 572, 882, 1043, 1071, 1303
TspGWI ACGGA 3 cut(s) 253, 461, 1018
TspRI CASTG 2 cut(s) 943, 954
VpaK11BI GGWCC 1 cut(s) 1127
XagI CCTNNNNNAGG 1 cut(s) 580
XapI RAATTY 2 cut(s) 783, 1310
XhoI CTCGAG 1 cut(s) 452
XmnI GAANNNNTTC 3 cut(s) 35, 604, 677
XspI CTAG 3 cut(s) 129, 776, 891
ZrmI AGTACT 1 cut(s) 547
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.