RLG00000030762

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
67011373 .. 67013895
2523 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000030762

Sequence Viewer

Length: 1545 bp
ATGACTGATTTACACTACTACCTCTTCTGCTCCGTCCTCTGCTTTCTCTCCACCATCTTCATCAAATCCTTGTTCACCAAACCTTCGACCAACAACCCTCCAAGCCCGCCTGCTCTACCAGTCATCGGTCACCTCCACCTCCTCACTTCCTCCTTATCCCAATCATTACACAAACTCTCAACCAAGTACGGCCCTCTCCTCCTCGTCCGGTTCGGCGCCTCTCGGATGCTCGTAGTTTCATCTGCCTCCATGGCCGCCGAAATCTTCAAAACACATGACCTCACTTTTGCTTCTCGACCCTCCTTTGCTTTTGCCGACGACTTGCCCTACAAAAACTTGGGTTTCTTTGCCACCCCGTATGGGGACTACTGGAGGTTCATGAAGAAGCTCTGCATGACGGAACTGCTCTCTCCCAAGCAGATTGAACGGTCACGTTCCATCCGGCAGGGAGAGATTGCAAGGTTCTTGAAGAAGATGATGGAGTGTGCTGAGAGAAAACAGAGGGTTGATGTGGGTGCTGAGCTTATGAGGCTCACAAACAACAGTATATGCAGGATGGCCATGAGCACCAGTTGCTCAGAGAATGGTGATGAAGCTGAGAAAATCAGGGAATTGGTGAAGGAATCATTTGAATTGGCCGCAAAGGTGTGTTTTGGGGATGTGTTGGGCCCGTTGAAGAGAGTGGGATTCTGGGTTTATGGAAAGCAGCTCATAGATGTGACCATGGGGTATGATAGGCTTTTAGAGGGGATGCTGAAGCAGCATGAAGAGAGAGCAGAGAGAGAGGGCTGGGATAGAGAAGACAAGGATTTGATGGATATTCTATTGAAGGCATATCAGGATGATCAAGCTGAGGTTCAGATCACCAGAACTCATGTCAAGGCTTTCTTGCTTGATCTTTTCATTGGAGGCACTGCTACCACAGCGGAGGCCATGCAATGGGGAGTAGCTGAGCTCATAAACCATCCAGACATATTCAACAAGGTCAGAGAGGAGATGAAAACAGTTGTTGGCAGCAGACTAGTTGAGGAATCAGATGTTGCAAACCTCCCTTACTTGCAGGCAGTGATAAAAGAAACACTGAGACTACACCCACCAGTTCCTTTGTCGACAAGAGAAAGCCGTGAAACTTGTAAAATAAAAGAGTTTGATATACCAGAAAAGACTTCGGTAGCAATCAACCAGTATGCAATAATGAGAGATCCAGAGTTATGGGACAATCCAGATGAGTTTAGGCCAGAGAGGTTCTTGGTTTCCACTAAAGAGAAATATGAATCAGAACTTGATCAGAATGAAAGTAGAGGACATAACTTTCAATATGTCCCATTTGGATCTGGAAGGAGGAGGTGCCCAGGTTCAAATTTGGCAACCATCTTGTTGAATACTTCAATTGCTGCCATGGTTCAATGCTTTGATTGGAACATTGGAGATGGAAATGAGGGTAGGGTTAATATGGAAGTTGGAGCGGGCATGTCTTTGCCCATGGCTCACCCACTTGTAGTTTTGCCTGTTGATTACTTCAACCCATTTGCTTCTTCAATGTAA

Protein Analysis

515

Amino Acids

58.34

Weight (kDa)

6.07

Isoelectric Point (pI)

41.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 33 - 481 1.1e-97 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 215, 1347
AccB7I CCANNNNNTGG 1 cut(s) 939
AccBSI CCGCTC 1 cut(s) 1466
AccI GTMKAC 1 cut(s) 1109
AciI CCGC 5 cut(s) 107, 255, 639, 926, 1466
AclWI GGATC 2 cut(s) 1196, 1339
AcoI YGGCCR 3 cut(s) 252, 558, 636
AcsI RAATTY 1 cut(s) 1360
AcuI CTGAAG 1 cut(s) 776
AcyI GRCGYC 1 cut(s) 216
AfaI GTAC 1 cut(s) 188
AfiI CCNNNNNNNGG 4 cut(s) 125, 360, 361, 939
AhlI ACTAGT 1 cut(s) 1021
AjnI CCWGG 1 cut(s) 1351
AluBI AGCT 7 cut(s) 388, 523, 596, 709, 851, 950, 955
AluI AGCT 7 cut(s) 388, 523, 596, 709, 851, 950, 955
Alw21I GWGCWC 2 cut(s) 569, 957
Alw26I GTCTC 1 cut(s) 1078
AlwI GGATC 2 cut(s) 1196, 1339
AoxI GGCC 7 cut(s) 190, 252, 558, 636, 667, 930, 1235
ApaI GGGCCC 1 cut(s) 671
ApeKI GCWGC 4 cut(s) 706, 760, 1014, 1394
ApoI RAATTY 1 cut(s) 1360
ArsI GACNNNNNNTTYG 2 cut(s) 269, 301
AspLEI GCGC 1 cut(s) 218
AspS9I GGNCC 3 cut(s) 191, 667, 668
AsuHPI GGTGA 6 cut(s) 67, 122, 599, 628, 856, 1481
BaeGI GKGCMC 2 cut(s) 671, 1352
BalI TGGCCA 1 cut(s) 560
BanI GGYRCC 2 cut(s) 215, 1347
BanII GRGCYC 2 cut(s) 671, 957
BbsI GAAGAC 1 cut(s) 807
Bbv12I GWGCWC 2 cut(s) 569, 957
BbvCI CCTCAGC 1 cut(s) 852
BbvI GCAGC 4 cut(s) 718, 772, 1026, 1381
BccI CCATC 8 cut(s) 62, 446, 472, 550, 808, 972, 1379, 1424
BceAI ACGGC 2 cut(s) 205, 1107
BciT130I CCWGG 1 cut(s) 1353
BclI TGATCA 2 cut(s) 844, 1285
BcoDI GTCTC 1 cut(s) 1078
BcuI ACTAGT 1 cut(s) 1021
BfaI CTAG 1 cut(s) 1022
BfoI RGCGCY 1 cut(s) 219
BglI GCCNNNNNGGC 1 cut(s) 251
BisI GCNGC 6 cut(s) 255, 639, 707, 761, 1015, 1395
BlpI GCTNAGC 2 cut(s) 519, 951
BlsI GCNGC 6 cut(s) 256, 640, 708, 762, 1016, 1396
Bme1390I CCNGG 1 cut(s) 1353
BmgT120I GGNCC 3 cut(s) 191, 667, 668
BmiI GGNNCC 3 cut(s) 217, 669, 1349
BmrFI CCNGG 1 cut(s) 1353
BmsI GCATC 2 cut(s) 216, 741
BpiI GAAGAC 1 cut(s) 807
BpmI CTGGAG 1 cut(s) 391
Bpu10I CCTNAGC 1 cut(s) 852
Bpu1102I GCTNAGC 2 cut(s) 519, 951
BsaHI GRCGYC 1 cut(s) 216
BsaJI CCNNGG 5 cut(s) 249, 723, 1351, 1398, 1482
BsaWI WCCGGW 1 cut(s) 207
Bsc4I CCNNNNNNNGG 4 cut(s) 125, 360, 361, 939
Bse1I ACTGG 5 cut(s) 119, 374, 570, 1097, 1183
Bse3DI GCAATG 1 cut(s) 944
BseBI CCWGG 1 cut(s) 1353
BseDI CCNNGG 5 cut(s) 249, 723, 1351, 1398, 1482
BseGI GGATG 7 cut(s) 231, 438, 561, 664, 756, 847, 964
BseLI CCNNNNNNNGG 4 cut(s) 125, 360, 361, 939
BseMI GCAATG 1 cut(s) 944
BseMII CTCAG 7 cut(s) 480, 510, 588, 591, 843, 942, 1073
BseNI ACTGG 5 cut(s) 119, 374, 570, 1097, 1183
BseRI GAGGAG 5 cut(s) 131, 188, 191, 1007, 1357
BseSI GKGCMC 2 cut(s) 671, 1352
BseXI GCAGC 4 cut(s) 718, 772, 1026, 1381
BseYI CCCAGC 1 cut(s) 789
BshFI GGCC 7 cut(s) 192, 254, 560, 638, 669, 932, 1237
BshNI GGYRCC 2 cut(s) 215, 1347
BsiHKAI GWGCWC 2 cut(s) 569, 957
BsiSI CCGG 2 cut(s) 208, 442
BslFI GGGAC 3 cut(s) 377, 1229, 1307
BslI CCNNNNNNNGG 4 cut(s) 125, 360, 361, 939
BsmAI GTCTC 1 cut(s) 1078
BsmFI GGGAC 3 cut(s) 377, 1229, 1307
BsnI GGCC 7 cut(s) 192, 254, 560, 638, 669, 932, 1237
Bsp120I GGGCCC 1 cut(s) 667
Bsp1286I GDGCHC 4 cut(s) 569, 671, 957, 1352
Bsp143I GATC 6 cut(s) 844, 861, 895, 1201, 1285, 1331
Bsp1720I GCTNAGC 2 cut(s) 519, 951
Bsp19I CCATGG 4 cut(s) 249, 723, 1398, 1482
BspACI CCGC 5 cut(s) 107, 255, 639, 926, 1466
BspANI GGCC 7 cut(s) 192, 254, 560, 638, 669, 932, 1237
BspCNI CTCAG 7 cut(s) 481, 511, 589, 590, 844, 943, 1074
BspHI TCATGA 1 cut(s) 378
BspLI GGNNCC 3 cut(s) 217, 669, 1349
BspPI GGATC 2 cut(s) 1196, 1339
BspT107I GGYRCC 2 cut(s) 215, 1347
BsrBI CCGCTC 1 cut(s) 1466
BsrDI GCAATG 1 cut(s) 944
BsrI ACTGG 5 cut(s) 119, 374, 570, 1097, 1183
BssECI CCNNGG 5 cut(s) 249, 723, 1351, 1398, 1482
BssMI GATC 6 cut(s) 844, 861, 895, 1201, 1285, 1331
BssNI GRCGYC 1 cut(s) 216
BssT1I CCWWGG 4 cut(s) 249, 723, 1398, 1482
Bst2UI CCWGG 1 cut(s) 1353
Bst4CI ACNGT 3 cut(s) 429, 545, 1006
Bst6I CTCTTC 3 cut(s) 29, 671, 762
BstACI GRCGYC 1 cut(s) 216
BstAPI GCANNNNNTGC 1 cut(s) 573
BstC8I GCNNGC 4 cut(s) 107, 111, 1062, 1468
BstDEI CTNAG 7 cut(s) 489, 519, 577, 597, 852, 951, 1082
BstDSI CCRYGG 4 cut(s) 249, 723, 1398, 1482
BstEII GGTNACC 1 cut(s) 128
BstF5I GGATG 7 cut(s) 231, 438, 561, 664, 756, 847, 964
BstH2I RGCGCY 1 cut(s) 219
BstHHI GCGC 1 cut(s) 218
BstKTI GATC 6 cut(s) 847, 864, 898, 1204, 1288, 1334
BstMAI GTCTC 1 cut(s) 1078
BstMBI GATC 6 cut(s) 844, 861, 895, 1201, 1285, 1331
BstMWI GCNNNNNNNGC 5 cut(s) 251, 529, 573, 760, 923
BstNI CCWGG 1 cut(s) 1353
BstNSI RCATGY 1 cut(s) 1474
BstPI GGTNACC 1 cut(s) 128
BstSCI CCNGG 1 cut(s) 1351
BstSLI GKGCMC 2 cut(s) 671, 1352
BstV1I GCAGC 4 cut(s) 718, 772, 1026, 1381
BstV2I GAAGAC 1 cut(s) 807
BstX2I RGATCY 2 cut(s) 1201, 1331
BstXI CCANNNNNNTGG 1 cut(s) 1212
BstYI RGATCY 2 cut(s) 1201, 1331
BsuRI GGCC 7 cut(s) 192, 254, 560, 638, 669, 932, 1237
BtgI CCRYGG 4 cut(s) 249, 723, 1398, 1482
BtsCI GGATG 7 cut(s) 231, 438, 561, 664, 756, 847, 964
BtsI GCAGTG 2 cut(s) 912, 1071
BtsIMutI CAGTG 3 cut(s) 912, 1071, 1079
Cac8I GCNNGC 4 cut(s) 107, 111, 1062, 1468
CciI TCATGA 1 cut(s) 378
CfoI GCGC 1 cut(s) 218
Cfr13I GGNCC 3 cut(s) 191, 667, 668
Csp6I GTAC 1 cut(s) 187
CviQI GTAC 1 cut(s) 187
DdeI CTNAG 7 cut(s) 489, 519, 577, 597, 852, 951, 1082
DinI GGCGCC 1 cut(s) 217
DpnI GATC 6 cut(s) 846, 863, 897, 1203, 1287, 1333
DpnII GATC 6 cut(s) 844, 861, 895, 1201, 1285, 1331
EaeI YGGCCR 3 cut(s) 252, 558, 636
Eam1104I CTCTTC 3 cut(s) 29, 671, 762
EarI CTCTTC 3 cut(s) 29, 671, 762
Ecl136II GAGCTC 1 cut(s) 955
Eco130I CCWWGG 4 cut(s) 249, 723, 1398, 1482
Eco24I GRGCYC 2 cut(s) 671, 957
Eco53kI GAGCTC 1 cut(s) 955
Eco57I CTGAAG 1 cut(s) 776
Eco91I GGTNACC 1 cut(s) 128
EcoICRI GAGCTC 1 cut(s) 955
EcoO65I GGTNACC 1 cut(s) 128
EcoRII CCWGG 1 cut(s) 1351
EcoT14I CCWWGG 4 cut(s) 249, 723, 1398, 1482
EcoT38I GRGCYC 2 cut(s) 671, 957
EgeI GGCGCC 1 cut(s) 217
EheI GGCGCC 1 cut(s) 217
ErhI CCWWGG 4 cut(s) 249, 723, 1398, 1482
FalI AAGNNNNNCTT 2 cut(s) 872, 904
FaqI GGGAC 3 cut(s) 377, 1229, 1307
FauI CCCGC 2 cut(s) 114, 1459
FbaI TGATCA 2 cut(s) 844, 1285
FblI GTMKAC 1 cut(s) 1109
Fnu4HI GCNGC 6 cut(s) 255, 639, 707, 761, 1015, 1395
FokI GGATG 7 cut(s) 238, 425, 568, 671, 763, 854, 951
FriOI GRGCYC 2 cut(s) 671, 957
Fsp4HI GCNGC 6 cut(s) 255, 639, 707, 761, 1015, 1395
FspBI CTAG 1 cut(s) 1022
GlaI GCGC 1 cut(s) 217
GluI GCNGC 6 cut(s) 255, 639, 707, 761, 1015, 1395
GsaI CCCAGC 1 cut(s) 793
GsuI CTGGAG 1 cut(s) 391
HaeII RGCGCY 1 cut(s) 219
HaeIII GGCC 7 cut(s) 192, 254, 560, 638, 669, 932, 1237
HapII CCGG 2 cut(s) 208, 442
HhaI GCGC 1 cut(s) 218
Hin1I GRCGYC 1 cut(s) 216
Hin6I GCGC 1 cut(s) 216
HinP1I GCGC 1 cut(s) 216
HincII GTYRAC 1 cut(s) 1110
HindII GTYRAC 1 cut(s) 1110
HinfI GANTC 4 cut(s) 623, 687, 1031, 1274
HpaII CCGG 2 cut(s) 208, 442
HphI GGTGA 6 cut(s) 67, 122, 599, 628, 856, 1481
Hpy166II GTNNAC 2 cut(s) 75, 1110
Hpy188I TCNGA 7 cut(s) 225, 580, 861, 989, 1036, 1279, 1290
Hpy188III TCNNGA 8 cut(s) 294, 379, 466, 839, 968, 1205, 1223, 1335
Hpy8I GTNNAC 2 cut(s) 75, 1110
Hpy99I CGWCG 1 cut(s) 320
HpyAV CCTTC 4 cut(s) 93, 613, 823, 1332
HpyCH4III ACNGT 3 cut(s) 429, 545, 1006
HpyCH4IV ACGT 1 cut(s) 433
HpyCH4V TGCA 7 cut(s) 393, 458, 552, 937, 1043, 1060, 1190
HpyF10VI GCNNNNNNNGC 5 cut(s) 251, 529, 573, 760, 923
HpyF3I CTNAG 7 cut(s) 489, 519, 577, 597, 852, 951, 1082
HpySE526I ACGT 1 cut(s) 433
Hsp92I GRCGYC 1 cut(s) 216
HspAI GCGC 1 cut(s) 216
KasI GGCGCC 1 cut(s) 215
Ksp22I TGATCA 2 cut(s) 844, 1285
Kzo9I GATC 6 cut(s) 844, 861, 895, 1201, 1285, 1331
LmnI GCTCC 2 cut(s) 35, 1463
Lsp1109I GCAGC 4 cut(s) 718, 772, 1026, 1381
LweI GCATC 2 cut(s) 216, 741
MaeI CTAG 1 cut(s) 1022
MaeII ACGT 1 cut(s) 433
MaeIII GTNAC 3 cut(s) 128, 429, 718
MalI GATC 6 cut(s) 846, 863, 897, 1203, 1287, 1333
MbiI CCGCTC 1 cut(s) 1466
MboI GATC 6 cut(s) 844, 861, 895, 1201, 1285, 1331
MfeI CAATTG 1 cut(s) 1389
MflI RGATCY 2 cut(s) 1201, 1331
MhlI GDGCHC 4 cut(s) 569, 671, 957, 1352
MlsI TGGCCA 1 cut(s) 560
MluCI AATT 4 cut(s) 611, 632, 1360, 1389
MluNI TGGCCA 1 cut(s) 560
Mly113I GGCGCC 1 cut(s) 216
MmeI TCCRAC 1 cut(s) 1441
Mox20I TGGCCA 1 cut(s) 560
MscI TGGCCA 1 cut(s) 560
MseI TTAA 1 cut(s) 1449
MslI CAYNNNNRTG 1 cut(s) 716
Msp20I TGGCCA 1 cut(s) 560
MspA1I CMGCKG 1 cut(s) 926
MspI CCGG 2 cut(s) 208, 442
MspR9I CCNGG 1 cut(s) 1353
MunI CAATTG 1 cut(s) 1389
MvaI CCWGG 1 cut(s) 1353
MwoI GCNNNNNNNGC 5 cut(s) 251, 529, 573, 760, 923
NarI GGCGCC 1 cut(s) 216
NcoI CCATGG 4 cut(s) 249, 723, 1398, 1482
NdeII GATC 6 cut(s) 844, 861, 895, 1201, 1285, 1331
NlaIV GGNNCC 3 cut(s) 217, 669, 1349
NmuCI GTSAC 3 cut(s) 128, 429, 718
NspI RCATGY 1 cut(s) 1474
PagI TCATGA 1 cut(s) 378
PfeI GAWTC 4 cut(s) 623, 687, 1031, 1274
PflMI CCANNNNNTGG 1 cut(s) 939
PkrI GCNGC 6 cut(s) 256, 640, 708, 762, 1016, 1396
PluTI GGCGCC 1 cut(s) 219
Psp124BI GAGCTC 1 cut(s) 957
Psp6I CCWGG 1 cut(s) 1351
PspEI GGTNACC 1 cut(s) 128
PspFI CCCAGC 1 cut(s) 789
PspGI CCWGG 1 cut(s) 1351
PspN4I GGNNCC 3 cut(s) 217, 669, 1349
PspOMI GGGCCC 1 cut(s) 667
PspPI GGNCC 3 cut(s) 191, 667, 668
PsuI RGATCY 2 cut(s) 1201, 1331
RsaI GTAC 1 cut(s) 188
RsaNI GTAC 1 cut(s) 187
RseI CAYNNNNRTG 1 cut(s) 716
SacI GAGCTC 1 cut(s) 957
SalI GTCGAC 1 cut(s) 1108
SaqAI TTAA 1 cut(s) 1449
SatI GCNGC 6 cut(s) 255, 639, 707, 761, 1015, 1395
Sau3AI GATC 6 cut(s) 844, 861, 895, 1201, 1285, 1331
Sau96I GGNCC 3 cut(s) 191, 667, 668
ScrFI CCNGG 1 cut(s) 1353
SduI GDGCHC 4 cut(s) 569, 671, 957, 1352
SfaNI GCATC 2 cut(s) 216, 741
SfoI GGCGCC 1 cut(s) 217
SmiMI CAYNNNNRTG 1 cut(s) 716
SpeI ACTAGT 1 cut(s) 1021
Sse9I AATT 4 cut(s) 611, 632, 1360, 1389
SsiI CCGC 5 cut(s) 107, 255, 639, 926, 1466
SspDI GGCGCC 1 cut(s) 215
SspMI CTAG 1 cut(s) 1022
SstI GAGCTC 1 cut(s) 957
StyD4I CCNGG 1 cut(s) 1351
StyI CCWWGG 4 cut(s) 249, 723, 1398, 1482
TaaI ACNGT 3 cut(s) 429, 545, 1006
TaiI ACGT 1 cut(s) 436
TaqI TCGA 3 cut(s) 86, 295, 1109
TaqII GACCGA 1 cut(s) 116
TasI AATT 4 cut(s) 611, 632, 1360, 1389
TauI GCSGC 2 cut(s) 257, 641
TfiI GAWTC 4 cut(s) 623, 687, 1031, 1274
Tru1I TTAA 1 cut(s) 1449
Tru9I TTAA 1 cut(s) 1449
TscAI CASTG 3 cut(s) 919, 1071, 1086
TseFI GTSAC 3 cut(s) 128, 429, 718
TseI GCWGC 4 cut(s) 706, 760, 1014, 1394
Tsp45I GTSAC 3 cut(s) 128, 429, 718
TspGWI ACGGA 2 cut(s) 22, 413
TspRI CASTG 3 cut(s) 919, 1071, 1086
Van91I CCANNNNNTGG 1 cut(s) 939
XapI RAATTY 1 cut(s) 1360
XceI RCATGY 1 cut(s) 1474
XmiI GTMKAC 1 cut(s) 1109
XspI CTAG 1 cut(s) 1022
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.