AT4G15330

cytochrome P450

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Reverse (-)
8751320 .. 8753297
1978 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G15330.1

Sequence Viewer

Length: 1542 bp
ATGGATGCAATCGTCGTTGACTCTCAAAACTGCTTCATCATCATTCTTCTATGTTCCTTCTCACTCATCTCCTACTTTGTCTTCTTCAAAAAACCAAAGGTTAACTTTGATTTGCTTCCGAGCCCTCCTTCACTTCCAATCATTGGTCATCTTCACCTCTTGCTCTCTACTCTTATCCACAAGTCTCTTCAGAAACTCTCCTCCAAGTATGGACCTCTTCTCCATCTCCGCATCTTTAACATCCCCTTCATCCTCGTCTCCTCGGACTCACTGGCCTATGAGATCTTCAGGGATCACGACGTGAACGTCTCCTCTCGCGGTGTTGGAGCGATCGACGAGTCCCTGGCGTTTGGATCTTCTGGTTTCATACAGGCTCCCTATGGAGATTACTGGAAATTCATGAAGAAGCTCATCGCAACTAAGTTGCTGGGACCCCAACCACTGGTGCGGTCACAGGATTTTCGTTCTGAAGAGCTAGAGAGGTTCTACAAAAGGCTGTTCGATAAGGCCATGAAGAAGGAAAGCGTTATGATTCATAAGGAAGCGTCCAGATTCGTTAACAATAGCCTTTACAAGATGTGCACGGGAAGGAGCTTTTCAGTGGAGAATAATGAAGTGGAGAGAATAATGGAACTTACTGCCGACTTAGGTGCCTTGTCACAGAAGTTTTTCGTGTCAAAGATGTTTCGTAAGCTGCTTGAGAAGCTCGGTATCTCACTTTTCAAAACGGAGATAATGGTTGTTTCACGTAGATTTAGTGAGCTGGTTGAAAGGATTCTTATTGAATATGAAGAGAAAATGGACGGGCATCAAGGCACACAGTTTATGGATGCCTTGTTGGCAGCTTATCGAGATGAAAATACAGAATATAAAATCACTAGGAGCCATATCAAGTCGCTTCTCACGGAGTTTTTCATTGGAGCCGCTGACGCCTCATCAATAGCAATACAGTGGGCAATGGCAGATATCATAAACAACCGTGAGATTCTTGAGAAATTGAGAGAAGAAATTGATTCGGTTGTAGGAAAAACAAGATTGGTTCAAGAAACAGATTTACCAAACCTTCCTTATTTGCAAGCTGTAGTTAAGGAAGGGCTAAGATTGCACCCGCCTACACCTCTGGTTGTAAGGGAGTTCCAAGAAGGGTGTGAGATTGGAGGGTTCTTTGTACCAAAGAACACAACACTTATTGTTAATTCTTATGCTATGATGAGAGATCCTGATTCATGGCAAGATCCTGATGAGTTTAAACCAGAGAGGTTTCTAGCTTCCTTAAGTAGAGAGGAGGATAAAAAAGAGAAAATCCTTAACTTCCTTCCTTTTGGGAGCGGAAGGAGAATGTGTCCTGGATCAAATCTTGGTTATATATTTGTAGGAACCGCGATTGGGATGATGGTCCAGTGCTTTGACTGGGAAATCAATGGAGACAAGATTAATATGGAAGAGGCTACTGGAGGGTTTCTCATCACCATGGCTCATCCCCTTACATGCACTCCTATTCCTCTTCCCCGAACCCAAAACTCTTTAATTTCCCATCTTTAA

Protein Analysis

513

Amino Acids

58.49

Weight (kDa)

6.45

Isoelectric Point (pI)

42.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 40 - 489 4.6e-87 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 305
AccB1I GGYRCC 1 cut(s) 650
AccB7I CCANNNNNTGG 2 cut(s) 143, 442
AccBSI CCGCTC 1 cut(s) 1329
AccII CGCG 2 cut(s) 318, 1382
AciI CCGC 7 cut(s) 229, 318, 448, 924, 1109, 1329, 1380
AclWI GGATC 5 cut(s) 300, 361, 1211, 1229, 1357
AcsI RAATTY 1 cut(s) 395
AcuI CTGAAG 3 cut(s) 173, 271, 489
AcyI GRCGYC 1 cut(s) 930
AdeI CACNNNGTG 1 cut(s) 301
AfaI GTAC 1 cut(s) 1170
AfiI CCNNNNNNNGG 3 cut(s) 143, 442, 1386
AflII CTTAAG 1 cut(s) 1273
AgsI TTSAA 5 cut(s) 88, 724, 770, 785, 1043
AjiI CACGTC 1 cut(s) 301
AjnI CCWGG 2 cut(s) 342, 1345
AluBI AGCT 9 cut(s) 409, 475, 594, 694, 706, 763, 845, 1079, 1268
AluI AGCT 9 cut(s) 409, 475, 594, 694, 706, 763, 845, 1079, 1268
Alw21I GWGCWC 1 cut(s) 584
Alw26I GTCTC 4 cut(s) 189, 262, 313, 1419
Alw44I GTGCAC 1 cut(s) 580
AlwI GGATC 5 cut(s) 300, 361, 1211, 1229, 1357
AoxI GGCC 2 cut(s) 273, 507
ApaLI GTGCAC 1 cut(s) 580
ApeKI GCWGC 2 cut(s) 694, 842
ApoI RAATTY 1 cut(s) 395
AseI ATTAAT 1 cut(s) 1434
Asp700I GAANNNNTTC 2 cut(s) 668, 774
AspS9I GGNCC 3 cut(s) 212, 431, 1396
AsuHPI GGTGA 2 cut(s) 146, 1459
AvaII GGWCC 3 cut(s) 212, 431, 1396
BaeGI GKGCMC 1 cut(s) 584
BanI GGYRCC 1 cut(s) 650
BanII GRGCYC 1 cut(s) 125
BbsI GAAGAC 1 cut(s) 73
Bbv12I GWGCWC 1 cut(s) 584
BbvI GCAGC 2 cut(s) 681, 854
BccI CCATC 2 cut(s) 231, 1387
BcgI CGANNNNNNTGC 2 cut(s) 632, 666
BciT130I CCWGG 2 cut(s) 344, 1347
BcoDI GTCTC 4 cut(s) 189, 262, 313, 1419
BfaI CTAG 3 cut(s) 476, 879, 1265
BfmI CTRYAG 1 cut(s) 1080
BfrI CTTAAG 1 cut(s) 1273
BglI GCCNNNNNGGC 1 cut(s) 839
BglII AGATCT 1 cut(s) 282
BisI GCNGC 3 cut(s) 695, 843, 924
BlsI GCNGC 3 cut(s) 696, 844, 925
Bme1390I CCNGG 2 cut(s) 344, 1347
Bme18I GGWCC 3 cut(s) 212, 431, 1396
BmgBI CACGTC 1 cut(s) 301
BmgT120I GGNCC 3 cut(s) 212, 431, 1396
BmiI GGNNCC 7 cut(s) 375, 432, 433, 652, 884, 922, 1378
BmrFI CCNGG 2 cut(s) 344, 1347
BmrI ACTGGG 1 cut(s) 1420
BmsI GCATC 3 cut(s) 240, 817, 820
BmuI ACTGGG 1 cut(s) 1420
BpiI GAAGAC 1 cut(s) 73
BplI GAGNNNNNCTC 2 cut(s) 1446, 1478
BpmI CTGGAG 1 cut(s) 1473
BpuEI CTTGAG 2 cut(s) 719, 1010
BsaAI YACGTR 1 cut(s) 749
BsaHI GRCGYC 1 cut(s) 930
BsaJI CCNNGG 3 cut(s) 261, 342, 1470
BsaXI ACNNNNNCTCC 6 cut(s) 204, 234, 1327, 1357, 1477, 1507
Bsc4I CCNNNNNNNGG 3 cut(s) 143, 442, 1386
Bse1I ACTGG 6 cut(s) 276, 395, 447, 1399, 1415, 1456
Bse3DI GCAATG 1 cut(s) 963
BseBI CCWGG 2 cut(s) 344, 1347
BseDI CCNNGG 3 cut(s) 261, 342, 1470
BseGI GGATG 6 cut(s) 10, 240, 249, 835, 1395, 1477
BseLI CCNNNNNNNGG 3 cut(s) 143, 442, 1386
BseMI GCAATG 1 cut(s) 963
BseNI ACTGG 6 cut(s) 276, 395, 447, 1399, 1415, 1456
BseRI GAGGAG 4 cut(s) 190, 250, 301, 1298
BseSI GKGCMC 1 cut(s) 584
BseXI GCAGC 2 cut(s) 681, 854
BseYI CCCAGC 1 cut(s) 427
Bsh1236I CGCG 2 cut(s) 318, 1382
Bsh1285I CGRYCG 1 cut(s) 333
BshFI GGCC 2 cut(s) 275, 509
BshNI GGYRCC 1 cut(s) 650
BsiEI CGRYCG 1 cut(s) 333
BsiHKAI GWGCWC 1 cut(s) 584
BslFI GGGAC 2 cut(s) 325, 444
BslI CCNNNNNNNGG 3 cut(s) 143, 442, 1386
BsmAI GTCTC 4 cut(s) 189, 262, 313, 1419
BsmBI CGTCTC 2 cut(s) 262, 313
BsmFI GGGAC 2 cut(s) 325, 444
BsnI GGCC 2 cut(s) 275, 509
Bsp1286I GDGCHC 2 cut(s) 125, 584
Bsp143I GATC 7 cut(s) 282, 292, 330, 353, 1216, 1234, 1349
Bsp19I CCATGG 1 cut(s) 1470
BspACI CCGC 7 cut(s) 229, 318, 448, 924, 1109, 1329, 1380
BspANI GGCC 2 cut(s) 275, 509
BspFNI CGCG 2 cut(s) 318, 1382
BspHI TCATGA 1 cut(s) 399
BspLI GGNNCC 7 cut(s) 375, 432, 433, 652, 884, 922, 1378
BspPI GGATC 5 cut(s) 300, 361, 1211, 1229, 1357
BspQI GCTCTTC 1 cut(s) 465
BspT107I GGYRCC 1 cut(s) 650
BspTI CTTAAG 1 cut(s) 1273
BsrBI CCGCTC 1 cut(s) 1329
BsrDI GCAATG 1 cut(s) 963
BsrI ACTGG 6 cut(s) 276, 395, 447, 1399, 1415, 1456
BssECI CCNNGG 3 cut(s) 261, 342, 1470
BssMI GATC 7 cut(s) 282, 292, 330, 353, 1216, 1234, 1349
BssNI GRCGYC 1 cut(s) 930
BssT1I CCWWGG 1 cut(s) 1470
Bst2UI CCWGG 2 cut(s) 344, 1347
Bst4CI ACNGT 3 cut(s) 822, 951, 980
Bst6I CTCTTC 6 cut(s) 192, 222, 465, 786, 1437, 1509
BstACI GRCGYC 1 cut(s) 930
BstAFI CTTAAG 1 cut(s) 1273
BstBAI YACGTR 1 cut(s) 749
BstC8I GCNNGC 1 cut(s) 1077
BstDEI CTNAG 3 cut(s) 420, 646, 1097
BstDSI CCRYGG 1 cut(s) 1470
BstF5I GGATG 6 cut(s) 10, 240, 249, 835, 1395, 1477
BstFNI CGCG 2 cut(s) 318, 1382
BstKTI GATC 7 cut(s) 285, 295, 333, 356, 1219, 1237, 1352
BstMAI GTCTC 4 cut(s) 189, 262, 313, 1419
BstMBI GATC 7 cut(s) 282, 292, 330, 353, 1216, 1234, 1349
BstMCI CGRYCG 1 cut(s) 333
BstMWI GCNNNNNNNGC 4 cut(s) 703, 839, 929, 1102
BstNI CCWGG 2 cut(s) 344, 1347
BstNSI RCATGY 1 cut(s) 1491
BstSCI CCNGG 2 cut(s) 342, 1345
BstSFI CTRYAG 1 cut(s) 1080
BstSLI GKGCMC 1 cut(s) 584
BstUI CGCG 2 cut(s) 318, 1382
BstV1I GCAGC 2 cut(s) 681, 854
BstV2I GAAGAC 1 cut(s) 73
BstX2I RGATCY 4 cut(s) 282, 353, 1216, 1234
BstYI RGATCY 4 cut(s) 282, 353, 1216, 1234
BsuRI GGCC 2 cut(s) 275, 509
BtgI CCRYGG 1 cut(s) 1470
BtgZI GCGATG 1 cut(s) 397
BtrI CACGTC 1 cut(s) 301
BtsCI GGATG 6 cut(s) 10, 240, 249, 835, 1395, 1477
BtsIMutI CAGTG 5 cut(s) 269, 440, 606, 956, 1406
Cac8I GCNNGC 1 cut(s) 1077
CciI TCATGA 1 cut(s) 399
Cfr13I GGNCC 3 cut(s) 212, 431, 1396
CseI GACGC 2 cut(s) 534, 938
Csp6I GTAC 1 cut(s) 1169
CviAII CATG 5 cut(s) 400, 511, 1227, 1471, 1488
CviQI GTAC 1 cut(s) 1169
DdeI CTNAG 3 cut(s) 420, 646, 1097
DpnI GATC 7 cut(s) 284, 294, 332, 355, 1218, 1236, 1351
DpnII GATC 7 cut(s) 282, 292, 330, 353, 1216, 1234, 1349
DraI TTTAAA 1 cut(s) 1249
DraIII CACNNNGTG 1 cut(s) 301
DrdI GACNNNNNNGTC 1 cut(s) 305
DseDI GACNNNNNNGTC 1 cut(s) 305
Eam1104I CTCTTC 6 cut(s) 192, 222, 465, 786, 1437, 1509
EarI CTCTTC 6 cut(s) 192, 222, 465, 786, 1437, 1509
Eco130I CCWWGG 1 cut(s) 1470
Eco24I GRGCYC 1 cut(s) 125
Eco32I GATATC 1 cut(s) 967
Eco47I GGWCC 3 cut(s) 212, 431, 1396
Eco57I CTGAAG 3 cut(s) 173, 271, 489
EcoO109I RGGNCCY 1 cut(s) 431
EcoRII CCWGG 2 cut(s) 342, 1345
EcoRV GATATC 1 cut(s) 967
EcoT14I CCWWGG 1 cut(s) 1470
EcoT38I GRGCYC 1 cut(s) 125
ErhI CCWWGG 1 cut(s) 1470
Esp3I CGTCTC 2 cut(s) 262, 313
FaeI CATG 5 cut(s) 403, 514, 1230, 1474, 1491
FalI AAGNNNNNCTT 2 cut(s) 89, 121
FaqI GGGAC 2 cut(s) 325, 444
FatI CATG 5 cut(s) 399, 510, 1226, 1470, 1487
FauI CCCGC 1 cut(s) 1116
Fnu4HI GCNGC 3 cut(s) 695, 843, 924
FokI GGATG 6 cut(s) 17, 227, 236, 842, 1402, 1464
FriOI GRGCYC 1 cut(s) 125
Fsp4HI GCNGC 3 cut(s) 695, 843, 924
FspBI CTAG 3 cut(s) 476, 879, 1265
GluI GCNGC 3 cut(s) 695, 843, 924
GsaI CCCAGC 1 cut(s) 431
GsuI CTGGAG 1 cut(s) 1473
HaeIII GGCC 2 cut(s) 275, 509
HgaI GACGC 2 cut(s) 534, 938
Hin1I GRCGYC 1 cut(s) 930
Hin1II CATG 5 cut(s) 403, 514, 1230, 1474, 1491
HincII GTYRAC 3 cut(s) 19, 103, 559
HindII GTYRAC 3 cut(s) 19, 103, 559
HinfI GANTC 9 cut(s) 20, 266, 338, 532, 552, 775, 985, 1013, 1223
HpaI GTTAAC 2 cut(s) 103, 559
HphI GGTGA 2 cut(s) 146, 1459
Hpy166II GTNNAC 5 cut(s) 19, 103, 304, 559, 582
Hpy188I TCNGA 4 cut(s) 120, 192, 265, 469
Hpy188III TCNNGA 8 cut(s) 296, 400, 549, 851, 989, 1043, 1220, 1238
Hpy8I GTNNAC 5 cut(s) 19, 103, 304, 559, 582
Hpy99I CGWCG 3 cut(s) 17, 302, 338
HpyCH4III ACNGT 3 cut(s) 822, 951, 980
HpyCH4IV ACGT 3 cut(s) 300, 306, 748
HpyCH4V TGCA 5 cut(s) 8, 582, 1075, 1105, 1491
HpyF10VI GCNNNNNNNGC 4 cut(s) 703, 839, 929, 1102
HpyF3I CTNAG 3 cut(s) 420, 646, 1097
HpySE526I ACGT 3 cut(s) 300, 306, 748
Hsp92I GRCGYC 1 cut(s) 930
Hsp92II CATG 5 cut(s) 403, 514, 1230, 1474, 1491
KflI GGGWCCC 1 cut(s) 431
KspAI GTTAAC 2 cut(s) 103, 559
Kzo9I GATC 7 cut(s) 282, 292, 330, 353, 1216, 1234, 1349
LguI GCTCTTC 1 cut(s) 465
LmnI GCTCC 6 cut(s) 326, 379, 591, 882, 920, 1326
Lsp1109I GCAGC 2 cut(s) 681, 854
LweI GCATC 3 cut(s) 240, 817, 820
MaeI CTAG 3 cut(s) 476, 879, 1265
MaeII ACGT 3 cut(s) 300, 306, 748
MaeIII GTNAC 2 cut(s) 450, 657
MalI GATC 7 cut(s) 284, 294, 332, 355, 1218, 1236, 1351
MbiI CCGCTC 1 cut(s) 1329
MboI GATC 7 cut(s) 282, 292, 330, 353, 1216, 1234, 1349
MflI RGATCY 4 cut(s) 282, 353, 1216, 1234
MhlI GDGCHC 2 cut(s) 125, 584
MluCI AATT 5 cut(s) 395, 995, 1008, 1195, 1527
MlyI GAGTC 3 cut(s) 14, 260, 347
MmeI TCCRAC 1 cut(s) 304
MroXI GAANNNNTTC 2 cut(s) 668, 774
MslI CAYNNNNRTG 1 cut(s) 1469
MspA1I CMGCKG 1 cut(s) 926
MspCI CTTAAG 1 cut(s) 1273
MspR9I CCNGG 2 cut(s) 344, 1347
MssI GTTTAAAC 1 cut(s) 1249
MvaI CCWGG 2 cut(s) 344, 1347
MvnI CGCG 2 cut(s) 318, 1382
MwoI GCNNNNNNNGC 4 cut(s) 703, 839, 929, 1102
NcoI CCATGG 1 cut(s) 1470
NdeII GATC 7 cut(s) 282, 292, 330, 353, 1216, 1234, 1349
NlaIII CATG 5 cut(s) 403, 514, 1230, 1474, 1491
NlaIV GGNNCC 7 cut(s) 375, 432, 433, 652, 884, 922, 1378
NmuCI GTSAC 2 cut(s) 450, 657
NspI RCATGY 1 cut(s) 1491
PagI TCATGA 1 cut(s) 399
PciSI GCTCTTC 1 cut(s) 465
PcsI WCGNNNNNNNCGW 1 cut(s) 303
PdmI GAANNNNTTC 2 cut(s) 668, 774
PfeI GAWTC 6 cut(s) 532, 552, 775, 985, 1013, 1223
PflMI CCANNNNNTGG 2 cut(s) 143, 442
PfoI TCCNGGA 1 cut(s) 1345
PkrI GCNGC 3 cut(s) 696, 844, 925
Ple19I CGATCG 1 cut(s) 333
PleI GAGTC 3 cut(s) 14, 260, 346
PmeI GTTTAAAC 1 cut(s) 1249
PpsI GAGTC 3 cut(s) 14, 260, 346
Ppu21I YACGTR 1 cut(s) 749
PpuMI RGGWCCY 1 cut(s) 431
PshBI ATTAAT 1 cut(s) 1434
Psp5II RGGWCCY 1 cut(s) 431
Psp6I CCWGG 2 cut(s) 342, 1345
PspFI CCCAGC 1 cut(s) 427
PspGI CCWGG 2 cut(s) 342, 1345
PspN4I GGNNCC 7 cut(s) 375, 432, 433, 652, 884, 922, 1378
PspPI GGNCC 3 cut(s) 212, 431, 1396
PspPPI RGGWCCY 1 cut(s) 431
PsuI RGATCY 4 cut(s) 282, 353, 1216, 1234
PvuI CGATCG 1 cut(s) 333
RsaI GTAC 1 cut(s) 1170
RsaNI GTAC 1 cut(s) 1169
RseI CAYNNNNRTG 1 cut(s) 1469
SapI GCTCTTC 1 cut(s) 465
SatI GCNGC 3 cut(s) 695, 843, 924
Sau3AI GATC 7 cut(s) 282, 292, 330, 353, 1216, 1234, 1349
Sau96I GGNCC 3 cut(s) 212, 431, 1396
SchI GAGTC 3 cut(s) 14, 260, 347
ScrFI CCNGG 2 cut(s) 344, 1347
SduI GDGCHC 2 cut(s) 125, 584
SfaNI GCATC 3 cut(s) 240, 817, 820
SfcI CTRYAG 1 cut(s) 1080
SinI GGWCC 3 cut(s) 212, 431, 1396
SmiMI CAYNNNNRTG 1 cut(s) 1469
SmlI CTYRAG 3 cut(s) 698, 989, 1273
SmoI CTYRAG 3 cut(s) 698, 989, 1273
Sse9I AATT 5 cut(s) 395, 995, 1008, 1195, 1527
SsiI CCGC 7 cut(s) 229, 318, 448, 924, 1109, 1329, 1380
SspMI CTAG 3 cut(s) 476, 879, 1265
StyD4I CCNGG 2 cut(s) 342, 1345
StyI CCWWGG 1 cut(s) 1470
TaaI ACNGT 3 cut(s) 822, 951, 980
TaiI ACGT 3 cut(s) 303, 309, 751
TaqI TCGA 3 cut(s) 333, 501, 850
TasI AATT 5 cut(s) 395, 995, 1008, 1195, 1527
TauI GCSGC 1 cut(s) 926
TfiI GAWTC 6 cut(s) 532, 552, 775, 985, 1013, 1223
TscAI CASTG 5 cut(s) 276, 447, 606, 956, 1406
TseFI GTSAC 2 cut(s) 450, 657
TseI GCWGC 2 cut(s) 694, 842
Tsp45I GTSAC 2 cut(s) 450, 657
TspGWI ACGGA 2 cut(s) 743, 920
TspRI CASTG 5 cut(s) 276, 447, 606, 956, 1406
Van91I CCANNNNNTGG 2 cut(s) 143, 442
Vha464I CTTAAG 1 cut(s) 1273
VneI GTGCAC 1 cut(s) 580
VpaK11BI GGWCC 3 cut(s) 212, 431, 1396
VspI ATTAAT 1 cut(s) 1434
XapI RAATTY 1 cut(s) 395
XceI RCATGY 1 cut(s) 1491
XmnI GAANNNNTTC 2 cut(s) 668, 774
XspI CTAG 3 cut(s) 476, 879, 1265
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.