AT2G27000

cytochrome P450

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Reverse (-)
11523287 .. 11525140
1854 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G27000.1

Sequence Viewer

Length: 1545 bp
ATGGGAGAGATAATGAACGTTGACTTTGTAAACTGTTTGATCTTAATCCTCCTCTGCCTCCTTTCAATCCTCTGTTACTCTTTCTTCTTCAAGAAACCAAAGGATGGTTTCAATTTGCCACCGAGCCCTCCCTCTCTACCGATCATTGGCCATCTTCATCATCTCCTCTCTCTTTTTATGCACAGATCTTTGCAAAAACTCTCCTCCAAGTATGGACCTCTCCTCTATCTTCACGTCTTCAATGTTCCCATACTCCTTGTCTCCTCTCCCTCAATAGCCTATGAGATCTTTAGGGCACAAGACGTAAACGTTTCCACTCGCGACTTCCCTACGAATGAGGGGTCTCTCTTCCTCGGATCATTTAGCTTCATTACCGCACCTTACGGAGAATACTGGAAGTTCATGAAGAAGCTCATCGTCACAAAGCTCCTCGGGCCTCAAGCACTCGAGAGGTCACAACGCATCCGTGCAAATGAAGTAGAGAGGTTTTACTCAAACCTATTAGATAAGGCGATGAAGAAAGAAAGTGTTGAGATTGCTGATGAAGCTATGAAGCTAGTCAACAACATAATCTGCAAGATGATTATGGGGAGGACCTGTTCAGAAGAAAATGGTGAAGCAGAGAGAATTAGAGGCTTGGTGACCAAGTCAGATGCCTTGTTGAAGAAGTTTTTGCTGGCGGCCATCTTGCGGAAACCACTTAAGAAGATTGGGATCACACTGTTTAAAAAGGTGTTCATGGATATTTCTCTCAAGTTTGACGAGGTGTTAGAGAAGATTCTTGTGGAAAACGAAGAGAGACTTGAGGAGAATCAACAAGGTACTGACATAATGGATAAGCTCTTAGAAGTTTATGGAGACAAAACTTCCGAGTATAAGATCACTAGAGACCATATCAAGTCCTTGTTTGTGGATCTTTTCTTTGCAGGTACTGACACCGCAACACACACTATAGAGTGGACCATGGCCGAGATCATGAACAACTCTTTGATTCTTGAGAGATTGAGAGAAGAAATTGATTCTGTTGTAGGGAAAACAAGGTTGATTCAAGAAACTGATCTACCGAATCTCCTTTACTTGCAAGCAACTGTCAAAGAAGGGCTAAGATTGCACCCTACGATCCCTCTTGTGTTGAGGACGTTTCAAGACGGGTGTACGATCGGAGGCTTTTCTATACCTAAGAAGACAAAACTTGTTGTTAATGGTTATGCTATAATGAGAGATCCTGATAACTGGGAAGATCCACTGGAGTTTAAACCAGAGAGGTTTCTAGCTTCTTCAAGATCAAGCCAAAAAGACGCAATAAAAGAAGAAGTTCTAAAATATCTTTCATTCGGAAGCGGAAGGAGAGGATGTCCTGGAGTGAATCTAGCTTATGTGTCTGTAGAAACCGCTATTGGAGTGATGGTGCAATGCTTTGATTGGAAGATCGACGGACATAAGATCAACATGAATGAGGTTGCTGGTAAAGGAACGTTGAGCATGGCTCATCCTCTTAAGTGCACTCTTGTTCCTCGAAGTGTAACCCCATTAACTTCAAAGTAG

Protein Analysis

514

Amino Acids

58.27

Weight (kDa)

8.53

Isoelectric Point (pI)

34.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 40 - 486 4.3e-88 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 917
AccB7I CCANNNNNTGG 1 cut(s) 104
AccII CGCG 1 cut(s) 321
AciI CCGC 6 cut(s) 375, 680, 691, 939, 1341, 1392
AclI AACGTT 3 cut(s) 18, 309, 1475
AclWI GGATC 6 cut(s) 364, 722, 921, 1114, 1217, 1235
AcoI YGGCCR 3 cut(s) 148, 681, 966
AfaI GTAC 3 cut(s) 823, 931, 1156
AfiI CCNNNNNNNGG 3 cut(s) 104, 146, 690
AflII CTTAAG 2 cut(s) 701, 1496
AgsI TTSAA 9 cut(s) 66, 91, 112, 241, 664, 1049, 1145, 1281, 1539
AjiI CACGTC 1 cut(s) 235
AjnI CCWGG 1 cut(s) 1357
AjuI GAANNNNNNNTTGG 2 cut(s) 1380, 1412
AloI GAACNNNNNNTCC 2 cut(s) 583, 615
AluBI AGCT 8 cut(s) 366, 412, 427, 548, 556, 841, 1274, 1373
AluI AGCT 8 cut(s) 366, 412, 427, 548, 556, 841, 1274, 1373
Alw21I GWGCWC 1 cut(s) 1505
Alw26I GTCTC 5 cut(s) 265, 348, 793, 852, 882
Alw44I GTGCAC 1 cut(s) 1501
AlwI GGATC 6 cut(s) 364, 722, 921, 1114, 1217, 1235
AlwNI CAGNNNCTG 1 cut(s) 932
Ama87I CYCGRG 2 cut(s) 431, 446
AoxI GGCC 4 cut(s) 148, 434, 681, 966
ApaLI GTGCAC 1 cut(s) 1501
ArsI GACNNNNNNTTYG 2 cut(s) 326, 358
Asp700I GAANNNNTTC 1 cut(s) 1314
AspS9I GGNCC 4 cut(s) 215, 434, 594, 960
AsuHPI GGTGA 2 cut(s) 626, 652
AvaI CYCGRG 2 cut(s) 431, 446
AvaII GGWCC 3 cut(s) 215, 594, 960
BaeGI GKGCMC 2 cut(s) 298, 1505
BalI TGGCCA 1 cut(s) 150
BanII GRGCYC 1 cut(s) 128
BbsI GAAGAC 2 cut(s) 229, 1190
Bbv12I GWGCWC 1 cut(s) 1505
BccI CCATC 4 cut(s) 98, 159, 692, 1399
BciT130I CCWGG 1 cut(s) 1359
BcoDI GTCTC 5 cut(s) 265, 348, 793, 852, 882
BfaI CTAG 4 cut(s) 557, 885, 1271, 1370
BfmI CTRYAG 2 cut(s) 951, 1383
BfrI CTTAAG 2 cut(s) 701, 1496
BfuAI ACCTGC 1 cut(s) 917
BglII AGATCT 2 cut(s) 185, 285
BisI GCNGC 1 cut(s) 681
BlsI GCNGC 1 cut(s) 682
Bme1390I CCNGG 1 cut(s) 1359
Bme18I GGWCC 3 cut(s) 215, 594, 960
BmeT110I CYCGRG 2 cut(s) 431, 446
BmgBI CACGTC 1 cut(s) 235
BmgT120I GGNCC 4 cut(s) 215, 434, 594, 960
BmrFI CCNGG 1 cut(s) 1359
BmrI ACTGGG 1 cut(s) 1243
BmsI GCATC 2 cut(s) 471, 643
BmuI ACTGGG 1 cut(s) 1243
BpiI GAAGAC 2 cut(s) 229, 1190
BplI GAGNNNNNCTC 2 cut(s) 1471, 1503
BpmI CTGGAG 2 cut(s) 1268, 1380
BpuEI CTTGAG 4 cut(s) 423, 737, 824, 1016
BsaBI GATNNNNATC 2 cut(s) 44, 713
BsaI GGTCTC 2 cut(s) 348, 882
BsaJI CCNNGG 3 cut(s) 352, 430, 963
BsaXI ACNNNNNCTCC 8 cut(s) 583, 613, 1053, 1083, 1339, 1369, 1392, 1422
Bsc4I CCNNNNNNNGG 3 cut(s) 104, 146, 690
Bse1I ACTGG 3 cut(s) 398, 1238, 1251
Bse3DI GCAATG 1 cut(s) 1418
Bse8I GATNNNNATC 2 cut(s) 44, 713
BseBI CCWGG 1 cut(s) 1359
BseDI CCNNGG 3 cut(s) 352, 430, 963
BseGI GGATG 4 cut(s) 109, 462, 1358, 1489
BseJI GATNNNNATC 2 cut(s) 44, 713
BseLI CCNNNNNNNGG 3 cut(s) 104, 146, 690
BseMI GCAATG 1 cut(s) 1418
BseNI ACTGG 3 cut(s) 398, 1238, 1251
BseRI GAGGAG 7 cut(s) 41, 155, 193, 212, 253, 419, 821
BseSI GKGCMC 2 cut(s) 298, 1505
Bsh1236I CGCG 1 cut(s) 321
Bsh1285I CGRYCG 1 cut(s) 1161
BshFI GGCC 4 cut(s) 150, 436, 683, 968
BsiEI CGRYCG 1 cut(s) 1161
BsiHKAI GWGCWC 1 cut(s) 1505
BsiHKCI CYCGRG 2 cut(s) 431, 446
BslI CCNNNNNNNGG 3 cut(s) 104, 146, 690
BsmAI GTCTC 5 cut(s) 265, 348, 793, 852, 882
BsnI GGCC 4 cut(s) 150, 436, 683, 968
Bso31I GGTCTC 2 cut(s) 348, 882
BsoBI CYCGRG 2 cut(s) 431, 446
Bsp1286I GDGCHC 3 cut(s) 128, 298, 1505
Bsp19I CCATGG 1 cut(s) 963
Bsp68I TCGCGA 1 cut(s) 321
BspACI CCGC 6 cut(s) 375, 680, 691, 939, 1341, 1392
BspANI GGCC 4 cut(s) 150, 436, 683, 968
BspFNI CGCG 1 cut(s) 321
BspHI TCATGA 2 cut(s) 402, 975
BspMI ACCTGC 1 cut(s) 917
BspPI GGATC 6 cut(s) 364, 722, 921, 1114, 1217, 1235
BspTI CTTAAG 2 cut(s) 701, 1496
BspTNI GGTCTC 2 cut(s) 348, 882
BsrDI GCAATG 1 cut(s) 1418
BsrI ACTGG 3 cut(s) 398, 1238, 1251
BssECI CCNNGG 3 cut(s) 352, 430, 963
BssT1I CCWWGG 1 cut(s) 963
Bst2UI CCWGG 1 cut(s) 1359
Bst4CI ACNGT 3 cut(s) 35, 723, 1090
Bst6I CTCTTC 2 cut(s) 353, 789
BstAFI CTTAAG 2 cut(s) 701, 1496
BstC8I GCNNGC 2 cut(s) 678, 1083
BstDEI CTNAG 3 cut(s) 844, 1103, 1179
BstDSI CCRYGG 1 cut(s) 963
BstEII GGTNACC 1 cut(s) 640
BstF5I GGATG 4 cut(s) 109, 462, 1358, 1489
BstFNI CGCG 1 cut(s) 321
BstMAI GTCTC 5 cut(s) 265, 348, 793, 852, 882
BstMCI CGRYCG 1 cut(s) 1161
BstMWI GCNNNNNNNGC 3 cut(s) 433, 545, 1108
BstNI CCWGG 1 cut(s) 1359
BstPI GGTNACC 1 cut(s) 640
BstSCI CCNGG 1 cut(s) 1357
BstSFI CTRYAG 2 cut(s) 951, 1383
BstSLI GKGCMC 2 cut(s) 298, 1505
BstUI CGCG 1 cut(s) 321
BstV2I GAAGAC 2 cut(s) 229, 1190
BstX2I RGATCY 5 cut(s) 185, 285, 913, 1222, 1240
BstYI RGATCY 5 cut(s) 185, 285, 913, 1222, 1240
BsuRI GGCC 4 cut(s) 150, 436, 683, 968
BtgI CCRYGG 1 cut(s) 963
BtgZI GCGATG 1 cut(s) 527
BtrI CACGTC 1 cut(s) 235
BtsCI GGATG 4 cut(s) 109, 462, 1358, 1489
BtsIMutI CAGTG 2 cut(s) 719, 1244
BtuMI TCGCGA 1 cut(s) 321
BveI ACCTGC 1 cut(s) 917
Cac8I GCNNGC 2 cut(s) 678, 1083
CaiI CAGNNNCTG 1 cut(s) 932
CciI TCATGA 2 cut(s) 402, 975
Cfr13I GGNCC 4 cut(s) 215, 434, 594, 960
CseI GACGC 1 cut(s) 1307
Csp6I GTAC 3 cut(s) 822, 930, 1155
CviAII CATG 6 cut(s) 403, 739, 964, 976, 1450, 1483
CviQI GTAC 3 cut(s) 822, 930, 1155
DdeI CTNAG 3 cut(s) 844, 1103, 1179
DraI TTTAAA 2 cut(s) 727, 1255
EaeI YGGCCR 3 cut(s) 148, 681, 966
Eam1104I CTCTTC 2 cut(s) 353, 789
EarI CTCTTC 2 cut(s) 353, 789
Eco130I CCWWGG 1 cut(s) 963
Eco24I GRGCYC 1 cut(s) 128
Eco31I GGTCTC 2 cut(s) 348, 882
Eco47I GGWCC 3 cut(s) 215, 594, 960
Eco88I CYCGRG 2 cut(s) 431, 446
Eco91I GGTNACC 1 cut(s) 640
EcoO109I RGGNCCY 1 cut(s) 594
EcoO65I GGTNACC 1 cut(s) 640
EcoRII CCWGG 1 cut(s) 1357
EcoT14I CCWWGG 1 cut(s) 963
EcoT38I GRGCYC 1 cut(s) 128
ErhI CCWWGG 1 cut(s) 963
FaeI CATG 6 cut(s) 406, 742, 967, 979, 1453, 1486
FalI AAGNNNNNCTT 2 cut(s) 786, 818
FatI CATG 6 cut(s) 402, 738, 963, 975, 1449, 1482
Fnu4HI GCNGC 1 cut(s) 681
FokI GGATG 4 cut(s) 116, 449, 1365, 1476
FriOI GRGCYC 1 cut(s) 128
Fsp4HI GCNGC 1 cut(s) 681
FspBI CTAG 4 cut(s) 557, 885, 1271, 1370
GluI GCNGC 1 cut(s) 681
GsuI CTGGAG 2 cut(s) 1268, 1380
HaeIII GGCC 4 cut(s) 150, 436, 683, 968
HgaI GACGC 1 cut(s) 1307
Hin1II CATG 6 cut(s) 406, 742, 967, 979, 1453, 1486
HincII GTYRAC 2 cut(s) 22, 562
HindII GTYRAC 2 cut(s) 22, 562
HinfI GANTC 7 cut(s) 778, 811, 991, 1019, 1045, 1066, 1366
HphI GGTGA 2 cut(s) 626, 652
Hpy166II GTNNAC 7 cut(s) 22, 31, 307, 562, 960, 1155, 1503
Hpy188I TCNGA 6 cut(s) 356, 604, 652, 871, 1163, 1337
Hpy8I GTNNAC 7 cut(s) 22, 31, 307, 562, 960, 1155, 1503
Hpy99I CGWCG 1 cut(s) 1436
HpyAV CCTTC 2 cut(s) 1091, 1338
HpyCH4III ACNGT 3 cut(s) 35, 723, 1090
HpyCH4IV ACGT 6 cut(s) 18, 234, 303, 309, 1139, 1475
HpyCH4V TGCA 9 cut(s) 181, 193, 470, 576, 926, 1081, 1111, 1411, 1503
HpyF10VI GCNNNNNNNGC 3 cut(s) 433, 545, 1108
HpyF3I CTNAG 3 cut(s) 844, 1103, 1179
HpySE526I ACGT 6 cut(s) 18, 234, 303, 309, 1139, 1475
Hsp92II CATG 6 cut(s) 406, 742, 967, 979, 1453, 1486
LmnI GCTCC 1 cut(s) 432
LweI GCATC 2 cut(s) 471, 643
MaeI CTAG 4 cut(s) 557, 885, 1271, 1370
MaeII ACGT 6 cut(s) 18, 234, 303, 309, 1139, 1475
MaeIII GTNAC 5 cut(s) 74, 418, 453, 640, 1522
MflI RGATCY 5 cut(s) 185, 285, 913, 1222, 1240
MhlI GDGCHC 3 cut(s) 128, 298, 1505
MlsI TGGCCA 1 cut(s) 150
MluCI AATT 3 cut(s) 112, 627, 1014
MluNI TGGCCA 1 cut(s) 150
Mox20I TGGCCA 1 cut(s) 150
MroXI GAANNNNTTC 1 cut(s) 1314
MscI TGGCCA 1 cut(s) 150
MseI TTAA 7 cut(s) 44, 702, 726, 1200, 1254, 1497, 1532
Msp20I TGGCCA 1 cut(s) 150
MspCI CTTAAG 2 cut(s) 701, 1496
MspR9I CCNGG 1 cut(s) 1359
MssI GTTTAAAC 1 cut(s) 1255
MvaI CCWGG 1 cut(s) 1359
MvnI CGCG 1 cut(s) 321
MwoI GCNNNNNNNGC 3 cut(s) 433, 545, 1108
NcoI CCATGG 1 cut(s) 963
NlaIII CATG 6 cut(s) 406, 742, 967, 979, 1453, 1486
NmeAIII GCCGAG 1 cut(s) 994
NmuCI GTSAC 3 cut(s) 418, 453, 640
NruI TCGCGA 1 cut(s) 321
PaeR7I CTCGAG 1 cut(s) 446
PagI TCATGA 2 cut(s) 402, 975
PdmI GAANNNNTTC 1 cut(s) 1314
PfeI GAWTC 7 cut(s) 778, 811, 991, 1019, 1045, 1066, 1366
PflFI GACNNNGTC 1 cut(s) 646
PflMI CCANNNNNTGG 1 cut(s) 104
PfoI TCCNGGA 1 cut(s) 1357
PkrI GCNGC 1 cut(s) 682
Ple19I CGATCG 1 cut(s) 1161
PmeI GTTTAAAC 1 cut(s) 1255
PpuMI RGGWCCY 1 cut(s) 594
Psp1406I AACGTT 3 cut(s) 18, 309, 1475
Psp5II RGGWCCY 1 cut(s) 594
Psp6I CCWGG 1 cut(s) 1357
PspEI GGTNACC 1 cut(s) 640
PspGI CCWGG 1 cut(s) 1357
PspPI GGNCC 4 cut(s) 215, 434, 594, 960
PspPPI RGGWCCY 1 cut(s) 594
PstNI CAGNNNCTG 1 cut(s) 932
PsuI RGATCY 5 cut(s) 185, 285, 913, 1222, 1240
PsyI GACNNNGTC 1 cut(s) 646
PvuI CGATCG 1 cut(s) 1161
RruI TCGCGA 1 cut(s) 321
RsaI GTAC 3 cut(s) 823, 931, 1156
RsaNI GTAC 3 cut(s) 822, 930, 1155
SaqAI TTAA 7 cut(s) 44, 702, 726, 1200, 1254, 1497, 1532
SatI GCNGC 1 cut(s) 681
Sau96I GGNCC 4 cut(s) 215, 434, 594, 960
ScrFI CCNGG 1 cut(s) 1359
SduI GDGCHC 3 cut(s) 128, 298, 1505
SfaNI GCATC 2 cut(s) 471, 643
SfcI CTRYAG 2 cut(s) 951, 1383
Sfr274I CTCGAG 1 cut(s) 446
SinI GGWCC 3 cut(s) 215, 594, 960
SlaI CTCGAG 1 cut(s) 446
SmlI CTYRAG 7 cut(s) 438, 446, 701, 752, 803, 995, 1496
SmoI CTYRAG 7 cut(s) 438, 446, 701, 752, 803, 995, 1496
Sse9I AATT 3 cut(s) 112, 627, 1014
SsiI CCGC 6 cut(s) 375, 680, 691, 939, 1341, 1392
SspMI CTAG 4 cut(s) 557, 885, 1271, 1370
StyD4I CCNGG 1 cut(s) 1357
StyI CCWWGG 1 cut(s) 963
TaaI ACNGT 3 cut(s) 35, 723, 1090
TaiI ACGT 6 cut(s) 21, 237, 306, 312, 1142, 1478
TaqI TCGA 3 cut(s) 447, 1431, 1516
TasI AATT 3 cut(s) 112, 627, 1014
TauI GCSGC 1 cut(s) 683
TfiI GAWTC 7 cut(s) 778, 811, 991, 1019, 1045, 1066, 1366
Tru1I TTAA 7 cut(s) 44, 702, 726, 1200, 1254, 1497, 1532
Tru9I TTAA 7 cut(s) 44, 702, 726, 1200, 1254, 1497, 1532
TscAI CASTG 2 cut(s) 726, 1251
TseFI GTSAC 3 cut(s) 418, 453, 640
Tsp45I GTSAC 3 cut(s) 418, 453, 640
TspGWI ACGGA 3 cut(s) 399, 455, 1449
TspRI CASTG 2 cut(s) 726, 1251
Tth111I GACNNNGTC 1 cut(s) 646
Van91I CCANNNNNTGG 1 cut(s) 104
Vha464I CTTAAG 2 cut(s) 701, 1496
VneI GTGCAC 1 cut(s) 1501
VpaK11BI GGWCC 3 cut(s) 215, 594, 960
XhoI CTCGAG 1 cut(s) 446
XmnI GAANNNNTTC 1 cut(s) 1314
XspI CTAG 4 cut(s) 557, 885, 1271, 1370
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.