AT4G15380

cytochrome P450

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Forward (+)
8788659 .. 8790589
1931 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G15380.1

Sequence Viewer

Length: 1554 bp
ATGGCAGCAATGAACATGATTGACTTTCAAAACTGCTTCATCTTTATCCTCCTATGTCTCTTCTCACGACTCTGTTATTCTCACTTCTTCAAGAAACCAAAGGACCCTCGCCTTCACTTTGATTTACCTCCGAGCCCTCCGTCTCTTCCCATCATCGGTCATCTGCACCTTCTTCTCTCTGTTCTACTCCACAGATCTTTACAAAAACTCTCCACCAAGTACGGATCTATTCTCTATCTCCGAGTCTTTAGGTTCCCTGTAGTCCTCATCTCGTCAGCCTCAATTGCATATGAGATCTTCAGGGCACACGACCTGAACATCTCGTACCGCGGTTTCACTCCGACCGATGATTCACTTTTTGCCGGATCTTTCAGCTTTATCTCTGCTCCCTATGGAGATTATTGGAAGTTCATGAAGAAGGTCCTAGTTACAAACGTTTTTGGGCCCCAAGCACACGAGCAGTCACGAGGTGTCCGTGCAGATGTGCTAGAGCGGTTTTATGGGAATCTGTTCGATAAAGCGATAAAGAAGCAGAGCGTGGAGATATGTGCTGAAGCGTTGAAGTTATCTAACTCCAGCATCTGCAAGATGATCATGGGGAGGAGTTGTTCAGAGGAGAGATTCAGGGCTTTGGCTACCGAGTTAGATGTTTTGACAAAGAAGCTCTTCTTTGCAAACATGTTGCGAGCATGGTTTAAGAAGCTTGTTGTCTCTCTGTTTAAAAAAGAAACTACAGTTATTTCCTACAGATTCGATGAGCTGCTCGAAAGCATTCTTGTGGAACACGAAAAGAAACTGGACGTGCATCATCAACGTACGGACTTGATGGACGCATTGTTGGCAGCTTATCGGGATGAAAATGCAGAGTATAAGATCACAAGGAACCATATCAAGTCAATTATTGCGGATCTTTTATTTGCAGGCACTGAAAACCAAGTGCAGACAATACAATGGGCAATGGCAGAGATCATTAACAACCCTAACGTTCTTGAGAGACTGAGAGGAGAAATCGATAGCGTGGTAGGAAAGTCAAGGTTGATTCAAGAAACGGATTTACCAAAGCTCCCTTATTTGCAAGCTGTGGTTAAGGAAACGATAAGACTGCACCCGCCGGGGCCTTTCTTCTTAAGGTTCACAAAAGAAGGGTGTAGGATCAGAGGGTTCTATGTACCAGAGAACACGTCAGTCGTTGTTAACGTTTATGCTGTGATGAGGGATCCTGATGCTTGGGAGGATCCTCTTGTGTTTAAGCCAGAGAGGTTCTTAGCTTCTTCAAGAGCAGAACAAGAGGAGGAGAGAAGAGAGAAAGAAATTAAGTACCTTCCTTTTGGAAGCGGAAGAAGAAGTTGTCCCGGAGAAAATCTAGCTTATGTCATTATGGGAACTGCAATTGGAGTGATGGTGCAGGGTTTTGAGTGGAGAACCACAGAAGAGAAAATTAACATGGACGAGGCTGTTGTAGGACTGAGCTTGACCATGGCTCATCCTCTTAAGATCATTCCTGTTGCTCGAACCTCAAACTCTTTAACTTCGAGTTTGCAAAAATGTTTGTGA

Protein Analysis

517

Amino Acids

59.25

Weight (kDa)

8.93

Isoelectric Point (pI)

37.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 43 - 485 2.4e-86 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 493
AccII CGCG 1 cut(s) 330
AciI CCGC 6 cut(s) 328, 330, 493, 905, 1109, 1335
AclI AACGTT 3 cut(s) 435, 984, 1197
AclWI GGATC 8 cut(s) 232, 373, 915, 1160, 1211, 1224, 1229, 1242
AcuI CTGAAG 2 cut(s) 283, 573
AdeI CACNNNGTG 1 cut(s) 470
AfaI GTAC 5 cut(s) 221, 326, 817, 1170, 1319
AfiI CCNNNNNNNGG 1 cut(s) 155
AflII CTTAAG 2 cut(s) 1126, 1490
AflIII ACRYGT 2 cut(s) 678, 1179
AgsI TTSAA 5 cut(s) 29, 91, 562, 1043, 1275
AjiI CACGTC 2 cut(s) 802, 1182
AloI GAACNNNNNNTCC 2 cut(s) 592, 624
Alw26I GTCTC 4 cut(s) 62, 147, 715, 988
AlwI GGATC 8 cut(s) 232, 373, 915, 1160, 1211, 1224, 1229, 1242
AlwNI CAGNNNCTG 2 cut(s) 582, 926
AoxI GGCC 2 cut(s) 443, 1115
ApaI GGGCCC 1 cut(s) 447
ApeKI GCWGC 3 cut(s) 5, 760, 842
Asp700I GAANNNNTTC 3 cut(s) 509, 665, 771
AspS9I GGNCC 5 cut(s) 103, 421, 443, 444, 1115
AsuC2I CCSGG 2 cut(s) 1113, 1353
AvaII GGWCC 2 cut(s) 103, 421
BaeGI GKGCMC 2 cut(s) 307, 447
BamHI GGATCC 2 cut(s) 1216, 1234
BanII GRGCYC 2 cut(s) 137, 447
BauI CACGAG 2 cut(s) 455, 465
BbvI GCAGC 3 cut(s) 17, 747, 854
BccI CCATC 3 cut(s) 158, 820, 1393
BcgI CGANNNNNNTGC 2 cut(s) 1084, 1118
BclI TGATCA 1 cut(s) 591
BcnI CCSGG 2 cut(s) 1113, 1353
BcoDI GTCTC 4 cut(s) 62, 147, 715, 988
BfaI CTAG 3 cut(s) 425, 488, 1364
BfmI CTRYAG 3 cut(s) 258, 732, 745
BfrI CTTAAG 2 cut(s) 1126, 1490
BglII AGATCT 2 cut(s) 194, 294
BisI GCNGC 3 cut(s) 6, 761, 843
BlsI GCNGC 3 cut(s) 7, 762, 844
Bme1390I CCNGG 2 cut(s) 1113, 1353
Bme18I GGWCC 2 cut(s) 103, 421
BmgBI CACGTC 2 cut(s) 802, 1182
BmgT120I GGNCC 5 cut(s) 103, 421, 443, 444, 1115
BmiI GGNNCC 8 cut(s) 105, 254, 445, 446, 884, 1116, 1218, 1236
BmrFI CCNGG 2 cut(s) 1113, 1353
BmsI GCATC 3 cut(s) 588, 814, 1213
BpmI CTGGAG 1 cut(s) 559
BpuEI CTTGAG 1 cut(s) 1010
BpuMI CCSGG 2 cut(s) 1113, 1353
Bsa29I ATCGAT 1 cut(s) 1011
BsaJI CCNNGG 3 cut(s) 328, 1112, 1476
BsaXI ACNNNNNCTCC 6 cut(s) 592, 622, 1047, 1077, 1386, 1416
Bsc4I CCNNNNNNNGG 1 cut(s) 155
Bse1I ACTGG 1 cut(s) 801
Bse3DI GCAATG 2 cut(s) 15, 963
BseCI ATCGAT 1 cut(s) 1011
BseDI CCNNGG 3 cut(s) 328, 1112, 1476
BseGI GGATG 2 cut(s) 859, 1483
BseLI CCNNNNNNNGG 1 cut(s) 155
BseMI GCAATG 2 cut(s) 15, 963
BseMII CTCAG 2 cut(s) 989, 1457
BseNI ACTGG 1 cut(s) 801
BseRI GAGGAG 5 cut(s) 616, 629, 1017, 1304, 1307
BseSI GKGCMC 2 cut(s) 307, 447
BseXI GCAGC 3 cut(s) 17, 747, 854
BsgI GTGCAG 5 cut(s) 149, 498, 959, 1088, 1424
Bsh1236I CGCG 1 cut(s) 330
Bsh1285I CGRYCG 1 cut(s) 345
BshFI GGCC 2 cut(s) 445, 1117
BshVI ATCGAT 1 cut(s) 1011
BsiEI CGRYCG 1 cut(s) 345
BsiSI CCGG 3 cut(s) 363, 1112, 1353
BsiWI CGTACG 1 cut(s) 815
BslFI GGGAC 1 cut(s) 1335
BslI CCNNNNNNNGG 1 cut(s) 155
BsmAI GTCTC 4 cut(s) 62, 147, 715, 988
BsmBI CGTCTC 1 cut(s) 147
BsmFI GGGAC 1 cut(s) 1335
BsmI GAATGC 1 cut(s) 771
BsnI GGCC 2 cut(s) 445, 1117
Bsp120I GGGCCC 1 cut(s) 443
Bsp1286I GDGCHC 3 cut(s) 137, 307, 447
Bsp19I CCATGG 1 cut(s) 1476
BspACI CCGC 6 cut(s) 328, 330, 493, 905, 1109, 1335
BspANI GGCC 2 cut(s) 445, 1117
BspCNI CTCAG 2 cut(s) 990, 1458
BspDI ATCGAT 1 cut(s) 1011
BspFNI CGCG 1 cut(s) 330
BspHI TCATGA 1 cut(s) 411
BspLI GGNNCC 8 cut(s) 105, 254, 445, 446, 884, 1116, 1218, 1236
BspPI GGATC 8 cut(s) 232, 373, 915, 1160, 1211, 1224, 1229, 1242
BspQI GCTCTTC 1 cut(s) 671
BspTI CTTAAG 2 cut(s) 1126, 1490
BsrBI CCGCTC 1 cut(s) 493
BsrDI GCAATG 2 cut(s) 15, 963
BsrI ACTGG 1 cut(s) 801
BssECI CCNNGG 3 cut(s) 328, 1112, 1476
BssSI CACGAG 2 cut(s) 455, 465
BssT1I CCWWGG 1 cut(s) 1476
Bst2BI CACGAG 2 cut(s) 455, 465
Bst4CI ACNGT 1 cut(s) 736
Bst6I CTCTTC 5 cut(s) 65, 150, 671, 1294, 1425
BstAFI CTTAAG 2 cut(s) 1126, 1490
BstC8I GCNNGC 3 cut(s) 687, 922, 1077
BstDEI CTNAG 3 cut(s) 998, 1264, 1466
BstDSI CCRYGG 2 cut(s) 328, 1476
BstF5I GGATG 2 cut(s) 859, 1483
BstFNI CGCG 1 cut(s) 330
BstMAI GTCTC 4 cut(s) 62, 147, 715, 988
BstMCI CGRYCG 1 cut(s) 345
BstMWI GCNNNNNNNGC 2 cut(s) 284, 839
BstNSI RCATGY 1 cut(s) 682
BstSCI CCNGG 2 cut(s) 1111, 1351
BstSFI CTRYAG 3 cut(s) 258, 732, 745
BstSLI GKGCMC 2 cut(s) 307, 447
BstUI CGCG 1 cut(s) 330
BstV1I GCAGC 3 cut(s) 17, 747, 854
BstX2I RGATCY 7 cut(s) 194, 224, 294, 365, 907, 1216, 1234
BstYI RGATCY 7 cut(s) 194, 224, 294, 365, 907, 1216, 1234
Bsu15I ATCGAT 1 cut(s) 1011
BsuRI GGCC 2 cut(s) 445, 1117
BsuTUI ATCGAT 1 cut(s) 1011
BtgI CCRYGG 2 cut(s) 328, 1476
BtrI CACGTC 2 cut(s) 802, 1182
BtsCI GGATG 2 cut(s) 859, 1483
BtsIMutI CAGTG 1 cut(s) 924
Cac8I GCNNGC 3 cut(s) 687, 922, 1077
CaiI CAGNNNCTG 2 cut(s) 582, 926
CciI TCATGA 1 cut(s) 411
Cfr13I GGNCC 5 cut(s) 103, 421, 443, 444, 1115
Cfr42I CCGCGG 1 cut(s) 331
ClaI ATCGAT 1 cut(s) 1011
CseI GACGC 1 cut(s) 839
Csp6I GTAC 5 cut(s) 220, 325, 816, 1169, 1318
CviAII CATG 7 cut(s) 16, 412, 595, 679, 690, 1444, 1477
CviQI GTAC 5 cut(s) 220, 325, 816, 1169, 1318
DdeI CTNAG 3 cut(s) 998, 1264, 1466
DraI TTTAAA 1 cut(s) 721
DraIII CACNNNGTG 1 cut(s) 470
Eam1104I CTCTTC 5 cut(s) 65, 150, 671, 1294, 1425
EarI CTCTTC 5 cut(s) 65, 150, 671, 1294, 1425
Eco130I CCWWGG 1 cut(s) 1476
Eco24I GRGCYC 2 cut(s) 137, 447
Eco47I GGWCC 2 cut(s) 103, 421
Eco57I CTGAAG 2 cut(s) 283, 573
EcoO109I RGGNCCY 4 cut(s) 103, 421, 444, 1115
EcoT14I CCWWGG 1 cut(s) 1476
EcoT38I GRGCYC 2 cut(s) 137, 447
ErhI CCWWGG 1 cut(s) 1476
Esp3I CGTCTC 1 cut(s) 147
FaeI CATG 7 cut(s) 19, 415, 598, 682, 693, 1447, 1480
FalI AAGNNNNNCTT 4 cut(s) 650, 682, 653, 685
FaqI GGGAC 1 cut(s) 1335
FatI CATG 7 cut(s) 15, 411, 594, 678, 689, 1443, 1476
FauI CCCGC 1 cut(s) 1116
FauNDI CATATG 1 cut(s) 289
FbaI TGATCA 1 cut(s) 591
Fnu4HI GCNGC 3 cut(s) 6, 761, 843
FokI GGATG 2 cut(s) 866, 1470
FriOI GRGCYC 2 cut(s) 137, 447
Fsp4HI GCNGC 3 cut(s) 6, 761, 843
FspBI CTAG 3 cut(s) 425, 488, 1364
GluI GCNGC 3 cut(s) 6, 761, 843
GsuI CTGGAG 1 cut(s) 559
HaeIII GGCC 2 cut(s) 445, 1117
HapII CCGG 3 cut(s) 363, 1112, 1353
HgaI GACGC 1 cut(s) 839
Hin1II CATG 7 cut(s) 19, 415, 598, 682, 693, 1447, 1480
HincII GTYRAC 1 cut(s) 1195
HindII GTYRAC 1 cut(s) 1195
HindIII AAGCTT 1 cut(s) 701
HinfI GANTC 7 cut(s) 69, 243, 350, 505, 621, 750, 1039
HpaI GTTAAC 1 cut(s) 1195
HpaII CCGG 3 cut(s) 363, 1112, 1353
Hpy166II GTNNAC 2 cut(s) 1134, 1195
Hpy188I TCNGA 5 cut(s) 132, 242, 342, 613, 1157
Hpy188III TCNNGA 9 cut(s) 66, 91, 412, 465, 851, 989, 1043, 1220, 1275
Hpy8I GTNNAC 2 cut(s) 1134, 1195
HpyAV CCTTC 5 cut(s) 122, 179, 412, 1136, 1331
HpyCH4III ACNGT 1 cut(s) 736
HpyCH4IV ACGT 6 cut(s) 435, 801, 814, 984, 1181, 1197
HpyF10VI GCNNNNNNNGC 2 cut(s) 284, 839
HpyF3I CTNAG 3 cut(s) 998, 1264, 1466
HpySE526I ACGT 6 cut(s) 435, 801, 814, 984, 1181, 1197
Hsp92II CATG 7 cut(s) 19, 415, 598, 682, 693, 1447, 1480
Ksp22I TGATCA 1 cut(s) 591
KspAI GTTAAC 1 cut(s) 1195
KspI CCGCGG 1 cut(s) 331
LguI GCTCTTC 1 cut(s) 671
LmnI GCTCC 2 cut(s) 391, 1068
Lsp1109I GCAGC 3 cut(s) 17, 747, 854
LweI GCATC 3 cut(s) 588, 814, 1213
MaeI CTAG 3 cut(s) 425, 488, 1364
MaeII ACGT 6 cut(s) 435, 801, 814, 984, 1181, 1197
MaeIII GTNAC 2 cut(s) 427, 462
MbiI CCGCTC 1 cut(s) 493
MfeI CAATTG 2 cut(s) 282, 1389
MflI RGATCY 7 cut(s) 194, 224, 294, 365, 907, 1216, 1234
MhlI GDGCHC 3 cut(s) 137, 307, 447
MluCI AATT 5 cut(s) 282, 897, 1311, 1389, 1437
MlyI GAGTC 2 cut(s) 63, 252
MmeI TCCRAC 1 cut(s) 365
MroXI GAANNNNTTC 3 cut(s) 509, 665, 771
MslI CAYNNNNRTG 1 cut(s) 776
MspA1I CMGCKG 1 cut(s) 330
MspCI CTTAAG 2 cut(s) 1126, 1490
MspI CCGG 3 cut(s) 363, 1112, 1353
MspR9I CCNGG 2 cut(s) 1113, 1353
MunI CAATTG 2 cut(s) 282, 1389
Mva1269I GAATGC 1 cut(s) 771
MvnI CGCG 1 cut(s) 330
MwoI GCNNNNNNNGC 2 cut(s) 284, 839
NciI CCSGG 2 cut(s) 1113, 1353
NcoI CCATGG 1 cut(s) 1476
NdeI CATATG 1 cut(s) 289
NlaIII CATG 7 cut(s) 19, 415, 598, 682, 693, 1447, 1480
NlaIV GGNNCC 8 cut(s) 105, 254, 445, 446, 884, 1116, 1218, 1236
NmuCI GTSAC 1 cut(s) 462
NspI RCATGY 1 cut(s) 682
PagI TCATGA 1 cut(s) 411
PciI ACATGT 1 cut(s) 678
PciSI GCTCTTC 1 cut(s) 671
PcsI WCGNNNNNNNCGW 2 cut(s) 472, 1194
PctI GAATGC 1 cut(s) 771
PdmI GAANNNNTTC 3 cut(s) 509, 665, 771
PfeI GAWTC 5 cut(s) 350, 505, 621, 750, 1039
Pfl23II CGTACG 1 cut(s) 815
PfoI TCCNGGA 1 cut(s) 1351
PkrI GCNGC 3 cut(s) 7, 762, 844
PleI GAGTC 2 cut(s) 63, 251
PpsI GAGTC 2 cut(s) 63, 251
PpuMI RGGWCCY 2 cut(s) 103, 421
PscI ACATGT 1 cut(s) 678
Psp1406I AACGTT 3 cut(s) 435, 984, 1197
Psp5II RGGWCCY 2 cut(s) 103, 421
PspLI CGTACG 1 cut(s) 815
PspN4I GGNNCC 8 cut(s) 105, 254, 445, 446, 884, 1116, 1218, 1236
PspOMI GGGCCC 1 cut(s) 443
PspPI GGNCC 5 cut(s) 103, 421, 443, 444, 1115
PspPPI RGGWCCY 2 cut(s) 103, 421
PsrI GAACNNNNNNTAC 2 cut(s) 308, 340
PstNI CAGNNNCTG 2 cut(s) 582, 926
PsuI RGATCY 7 cut(s) 194, 224, 294, 365, 907, 1216, 1234
RsaI GTAC 5 cut(s) 221, 326, 817, 1170, 1319
RsaNI GTAC 5 cut(s) 220, 325, 816, 1169, 1318
RseI CAYNNNNRTG 1 cut(s) 776
SacII CCGCGG 1 cut(s) 331
SapI GCTCTTC 1 cut(s) 671
SatI GCNGC 3 cut(s) 6, 761, 843
Sau96I GGNCC 5 cut(s) 103, 421, 443, 444, 1115
SchI GAGTC 2 cut(s) 63, 252
ScrFI CCNGG 2 cut(s) 1113, 1353
SduI GDGCHC 3 cut(s) 137, 307, 447
SfaNI GCATC 3 cut(s) 588, 814, 1213
SfcI CTRYAG 3 cut(s) 258, 732, 745
Sfr303I CCGCGG 1 cut(s) 331
SgrBI CCGCGG 1 cut(s) 331
SinI GGWCC 2 cut(s) 103, 421
SmiMI CAYNNNNRTG 1 cut(s) 776
SmlI CTYRAG 3 cut(s) 989, 1126, 1490
SmoI CTYRAG 3 cut(s) 989, 1126, 1490
Sse9I AATT 5 cut(s) 282, 897, 1311, 1389, 1437
SsiI CCGC 6 cut(s) 328, 330, 493, 905, 1109, 1335
SspMI CTAG 3 cut(s) 425, 488, 1364
StyD4I CCNGG 2 cut(s) 1111, 1351
StyI CCWWGG 1 cut(s) 1476
TaaI ACNGT 1 cut(s) 736
TaiI ACGT 6 cut(s) 438, 804, 817, 987, 1184, 1200
TaqI TCGA 6 cut(s) 513, 753, 765, 1011, 1510, 1532
TaqII GACCGA 2 cut(s) 146, 359
TasI AATT 5 cut(s) 282, 897, 1311, 1389, 1437
TfiI GAWTC 5 cut(s) 350, 505, 621, 750, 1039
TscAI CASTG 1 cut(s) 931
TseFI GTSAC 1 cut(s) 462
TseI GCWGC 3 cut(s) 5, 760, 842
Tsp45I GTSAC 1 cut(s) 462
TspDTI ATGAA 5 cut(s) 26, 28, 400, 428, 870
TspGWI ACGGA 5 cut(s) 129, 237, 464, 833, 1064
TspRI CASTG 1 cut(s) 931
Vha464I CTTAAG 2 cut(s) 1126, 1490
VpaK11BI GGWCC 2 cut(s) 103, 421
XceI RCATGY 1 cut(s) 682
XmnI GAANNNNTTC 3 cut(s) 509, 665, 771
XspI CTAG 3 cut(s) 425, 488, 1364
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.