AT4G15360

cytochrome P450

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Forward (+)
8770180 .. 8771960
1781 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G15360.1

Sequence Viewer

Length: 1584 bp
ATGATAGCAATCATCGTTGAGTTCCAAAACTTCTTTATCTTCATCCTTCTATGCCTCTTCTCACTCCTCTGTCACTCTCTCTTCTTCAAGAAACCAAAAGACTCACGAAGCTTTGTTCTGCCTTCAAGCCCTCCTTCTCTTCCAATCATCGGCCATCTTCACCTTCTCCTCTCTGTCCTAACTCACAAGTCTCTTCAGAAACTCTCCTCCAAGTACGGACCTCTTCTCCTTATCCGCATCTTCTATGTACCCATCATTCTTGTCTCCTCTTCCTCTATGGCCTACGAGATCTTCAAGGCCCATGACGTGAACGTCTCTTCTCGCGGTATTATTGCTCTTGATGAGTCTCTCATGTTTGGGGCTTCTGGCATCTTGAACGCTCCCTATGGAGATTACTGGAAGTTCATGAAGAAGCTCATGGCCACTAAGCTACTCCGACCGCAAGTGCTGGAGCGGTCACGAGGTGTTCGTGTTGAAGAGCTACATAGATTTTACAGGAGCATTCTTGATAAGGCGACGAAGAATGAGAGCGTTGAGATCGGTAAGGAAGCGATGAAGCTCATGAACAACACCTTGTGTAAACTGATCATGGGAAGGAGTTTTTCAGAGGACAACGGTGAATCAAATAGAGTCAGGGGCTTGGTTGATGAAACCTATGCCTTGTCCGAGAAGATATTCTTGGCAGCTATATTGCGCAGACCTCTTGCAAAACTTCGGATCTCACTATTCAAGAAAGAGATAATGGGTGTCTCCAACAAATTCGATGAGCTACTAGAGAGGATCCTTCAGGAACGCAAAGAGAATTTGGAAGAGAAGAATAATGAAGGTATGGATATGATGGACGTGTTGTTGGAAGCTTATGGAGATGAAAACGCTGAGTATAAGATCACATGGAAGCATATCAAGGCATTTTTCGTGGAGTTTTTCATTGGAGGGACTGATACCTCAGTGCAAACAACACAATGGGCAATGGCCGAGATGATCAATAACGCTAACGTTCTTGAGAGACTGAGAGAAGAAATCGTCTCCGTTGTAGGGGAAACAAGGTTGATCCAAGAAACAGATTTACCAAACCTACCTTATTTGCAAGCAGTGGTTAAGGAAGTTCTAAGATTGCACCCACCATCACCGGTCTTAATACGGAAGTTCCAAGAAAAATGTGAGGTCAAAGGATTTTACATACCGGAGAAGACAACACTCATTGTTAATGTTTACGCTATAATGAGAGATTCTGATTCTTGGGAAGATCCTGAGAAATTTAAGCCAGAGAGGTTTCTAACTTCTTCAAGATCAGGGGAAGAGGATGAAAAAGAGCTTAAGTTTCTTCCTTTTGGCAGCGGAAGGAGAGGATGTCCTGGAGCAAACCTTGGTTCTATATTTGTAGGAACCGCAATAGGAGTGATGGTGCAGTGCTTTGACTGGAAAATCAAAGAAGATAAGGTCAACATGGAAGAGACTTTTGAAGGAATGACCCTGAAAATGGTTCATCCGCTTACTTGCACTCCGTTCTTCGAACCCAACCTTTATCTTTTGCTTTTAATCTCTAAATTTCCGTGTCTGATACTTAGCTTTGGAGCTTGTTAA

Protein Analysis

527

Amino Acids

60.3

Weight (kDa)

7.55

Isoelectric Point (pI)

44.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 41 - 491 7.1e-95 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 311
Acc16I TGCGCA 1 cut(s) 695
AccBSI CCGCTC 1 cut(s) 454
AccII CGCG 1 cut(s) 324
AciI CCGC 7 cut(s) 235, 324, 440, 454, 1338, 1389, 1490
AclI AACGTT 1 cut(s) 996
AclWI GGATC 5 cut(s) 725, 775, 788, 1045, 1241
AcoI YGGCCR 3 cut(s) 151, 420, 972
AcsI RAATTY 4 cut(s) 758, 802, 1256, 1547
AcuI CTGAAG 2 cut(s) 179, 770
AdeI CACNNNGTG 2 cut(s) 464, 576
AfaI GTAC 2 cut(s) 215, 249
AfiI CCNNNNNNNGG 3 cut(s) 149, 1035, 1480
AflII CTTAAG 1 cut(s) 1316
AflIII ACRYGT 1 cut(s) 843
AgeI ACCGGT 1 cut(s) 1129
AgsI TTSAA 8 cut(s) 88, 126, 295, 376, 476, 730, 1287, 1463
AjiI CACGTC 2 cut(s) 307, 844
AjnI CCWGG 1 cut(s) 1354
AjuI GAANNNNNNNTTGG 2 cut(s) 662, 694
Alw26I GTCTC 8 cut(s) 195, 268, 319, 351, 754, 1000, 1030, 1448
AlwI GGATC 5 cut(s) 725, 775, 788, 1045, 1241
AoxI GGCC 5 cut(s) 151, 279, 297, 420, 972
ApeKI GCWGC 2 cut(s) 683, 1335
ApoI RAATTY 4 cut(s) 758, 802, 1256, 1547
AsiGI ACCGGT 1 cut(s) 1129
Asp700I GAANNNNTTC 1 cut(s) 674
AspLEI GCGC 1 cut(s) 696
AspS9I GGNCC 2 cut(s) 218, 298
AsuHPI GGTGA 3 cut(s) 152, 629, 1119
AsuII TTCGAA 1 cut(s) 1512
AvaII GGWCC 1 cut(s) 218
BaeI ACNNNNGTAYC 2 cut(s) 933, 966
BalI TGGCCA 1 cut(s) 422
BamHI GGATCC 1 cut(s) 780
BauI CACGAG 1 cut(s) 459
BbsI GAAGAC 1 cut(s) 1196
BbvI GCAGC 2 cut(s) 695, 1347
BccI CCATC 5 cut(s) 162, 260, 832, 1132, 1396
BciT130I CCWGG 1 cut(s) 1356
BclI TGATCA 2 cut(s) 585, 981
BcoDI GTCTC 8 cut(s) 195, 268, 319, 351, 754, 1000, 1030, 1448
BfaI CTAG 1 cut(s) 773
BfrI CTTAAG 1 cut(s) 1316
BglII AGATCT 1 cut(s) 288
BisI GCNGC 2 cut(s) 684, 1336
BlsI GCNGC 2 cut(s) 685, 1337
Bme1390I CCNGG 1 cut(s) 1356
Bme18I GGWCC 1 cut(s) 218
BmgBI CACGTC 2 cut(s) 307, 844
BmgT120I GGNCC 2 cut(s) 218, 298
BmiI GGNNCC 2 cut(s) 782, 1387
BmrFI CCNGG 1 cut(s) 1356
BmsI GCATC 2 cut(s) 246, 378
BpiI GAAGAC 1 cut(s) 1196
BpmI CTGGAG 2 cut(s) 470, 1377
Bpu14I TTCGAA 1 cut(s) 1512
BpuEI CTTGAG 1 cut(s) 1022
BsaBI GATNNNNATC 1 cut(s) 8
BsaJI CCNNGG 1 cut(s) 1366
BsaWI WCCGGW 2 cut(s) 1129, 1183
BsaXI ACNNNNNCTCC 8 cut(s) 210, 240, 1336, 1366, 1389, 1419, 1486, 1516
Bsc4I CCNNNNNNNGG 3 cut(s) 149, 1035, 1480
Bse118I RCCGGY 1 cut(s) 1129
Bse1I ACTGG 2 cut(s) 401, 1424
Bse3DI GCAATG 1 cut(s) 975
Bse8I GATNNNNATC 1 cut(s) 8
BseBI CCWGG 1 cut(s) 1356
BseDI CCNNGG 1 cut(s) 1366
BseGI GGATG 4 cut(s) 42, 1309, 1355, 1486
BseJI GATNNNNATC 1 cut(s) 8
BseLI CCNNNNNNNGG 3 cut(s) 149, 1035, 1480
BseMI GCAATG 1 cut(s) 975
BseMII CTCAG 4 cut(s) 867, 960, 1001, 1242
BseNI ACTGG 2 cut(s) 401, 1424
BseRI GAGGAG 4 cut(s) 56, 158, 196, 256
BseXI GCAGC 2 cut(s) 695, 1347
BsgI GTGCAG 1 cut(s) 1427
Bsh1236I CGCG 1 cut(s) 324
Bsh1285I CGRYCG 1 cut(s) 440
BshFI GGCC 5 cut(s) 153, 281, 299, 422, 974
BshTI ACCGGT 1 cut(s) 1129
BsiEI CGRYCG 1 cut(s) 440
BsiSI CCGG 2 cut(s) 1130, 1184
BslFI GGGAC 1 cut(s) 949
BslI CCNNNNNNNGG 3 cut(s) 149, 1035, 1480
BsmAI GTCTC 8 cut(s) 195, 268, 319, 351, 754, 1000, 1030, 1448
BsmBI CGTCTC 2 cut(s) 319, 1030
BsmFI GGGAC 1 cut(s) 949
BsmI GAATGC 1 cut(s) 501
BsnI GGCC 5 cut(s) 153, 281, 299, 422, 974
Bsp119I TTCGAA 1 cut(s) 1512
BspACI CCGC 7 cut(s) 235, 324, 440, 454, 1338, 1389, 1490
BspANI GGCC 5 cut(s) 153, 281, 299, 422, 974
BspCNI CTCAG 4 cut(s) 868, 959, 1002, 1243
BspFNI CGCG 1 cut(s) 324
BspHI TCATGA 2 cut(s) 405, 561
BspLI GGNNCC 2 cut(s) 782, 1387
BspPI GGATC 5 cut(s) 725, 775, 788, 1045, 1241
BspQI GCTCTTC 1 cut(s) 471
BspT104I TTCGAA 1 cut(s) 1512
BspTI CTTAAG 1 cut(s) 1316
BsrBI CCGCTC 1 cut(s) 454
BsrDI GCAATG 1 cut(s) 975
BsrFI RCCGGY 1 cut(s) 1129
BsrI ACTGG 2 cut(s) 401, 1424
BssAI RCCGGY 1 cut(s) 1129
BssECI CCNNGG 1 cut(s) 1366
BssSI CACGAG 1 cut(s) 459
BssT1I CCWWGG 1 cut(s) 1366
Bst2BI CACGAG 1 cut(s) 459
Bst2UI CCWGG 1 cut(s) 1356
Bst4CI ACNGT 1 cut(s) 617
BstAFI CTTAAG 1 cut(s) 1316
BstBI TTCGAA 1 cut(s) 1512
BstC8I GCNNGC 1 cut(s) 1089
BstDEI CTNAG 7 cut(s) 426, 876, 946, 1010, 1109, 1251, 1565
BstF5I GGATG 4 cut(s) 42, 1309, 1355, 1486
BstFNI CGCG 1 cut(s) 324
BstHHI GCGC 1 cut(s) 696
BstMAI GTCTC 8 cut(s) 195, 268, 319, 351, 754, 1000, 1030, 1448
BstMCI CGRYCG 1 cut(s) 440
BstNI CCWGG 1 cut(s) 1356
BstSCI CCNGG 1 cut(s) 1354
BstUI CGCG 1 cut(s) 324
BstV1I GCAGC 2 cut(s) 695, 1347
BstV2I GAAGAC 1 cut(s) 1196
BstX2I RGATCY 4 cut(s) 288, 717, 780, 1246
BstYI RGATCY 4 cut(s) 288, 717, 780, 1246
BsuRI GGCC 5 cut(s) 153, 281, 299, 422, 974
BtgZI GCGATG 1 cut(s) 566
BtrI CACGTC 2 cut(s) 307, 844
BtsCI GGATG 4 cut(s) 42, 1309, 1355, 1486
BtsI GCAGTG 2 cut(s) 1098, 1415
BtsIMutI CAGTG 3 cut(s) 954, 1098, 1415
Cac8I GCNNGC 1 cut(s) 1089
CciI TCATGA 2 cut(s) 405, 561
CfoI GCGC 1 cut(s) 696
Cfr10I RCCGGY 1 cut(s) 1129
Cfr13I GGNCC 2 cut(s) 218, 298
Csp6I GTAC 2 cut(s) 214, 248
CspAI ACCGGT 1 cut(s) 1129
CviAII CATG 8 cut(s) 302, 352, 406, 418, 562, 589, 891, 1447
CviQI GTAC 2 cut(s) 214, 248
DdeI CTNAG 7 cut(s) 426, 876, 946, 1010, 1109, 1251, 1565
DraIII CACNNNGTG 2 cut(s) 464, 576
DrdI GACNNNNNNGTC 1 cut(s) 311
DseDI GACNNNNNNGTC 1 cut(s) 311
EaeI YGGCCR 3 cut(s) 151, 420, 972
Eco130I CCWWGG 1 cut(s) 1366
Eco47I GGWCC 1 cut(s) 218
Eco57I CTGAAG 2 cut(s) 179, 770
EcoRII CCWGG 1 cut(s) 1354
EcoT14I CCWWGG 1 cut(s) 1366
ErhI CCWWGG 1 cut(s) 1366
Esp3I CGTCTC 2 cut(s) 319, 1030
FaeI CATG 8 cut(s) 305, 355, 409, 421, 565, 592, 894, 1450
FalI AAGNNNNNCTT 4 cut(s) 118, 150, 662, 694
FaqI GGGAC 1 cut(s) 949
FatI CATG 8 cut(s) 301, 351, 405, 417, 561, 588, 890, 1446
FbaI TGATCA 2 cut(s) 585, 981
Fnu4HI GCNGC 2 cut(s) 684, 1336
FokI GGATG 4 cut(s) 29, 1316, 1362, 1473
Fsp4HI GCNGC 2 cut(s) 684, 1336
FspBI CTAG 1 cut(s) 773
FspI TGCGCA 1 cut(s) 695
GlaI GCGC 1 cut(s) 695
GluI GCNGC 2 cut(s) 684, 1336
GsuI CTGGAG 2 cut(s) 470, 1377
HaeIII GGCC 5 cut(s) 153, 281, 299, 422, 974
HapII CCGG 2 cut(s) 1130, 1184
HhaI GCGC 1 cut(s) 696
Hin1II CATG 8 cut(s) 305, 355, 409, 421, 565, 592, 894, 1450
Hin6I GCGC 1 cut(s) 694
HinP1I GCGC 1 cut(s) 694
HincII GTYRAC 1 cut(s) 1444
HindII GTYRAC 1 cut(s) 1444
HindIII AAGCTT 2 cut(s) 109, 855
HinfI GANTC 6 cut(s) 101, 344, 620, 630, 1229, 1235
HpaII CCGG 2 cut(s) 1130, 1184
HphI GGTGA 3 cut(s) 152, 629, 1119
Hpy166II GTNNAC 4 cut(s) 310, 581, 1213, 1444
Hpy188I TCNGA 7 cut(s) 198, 437, 607, 667, 717, 1234, 1560
Hpy8I GTNNAC 4 cut(s) 310, 581, 1213, 1444
Hpy99I CGWCG 1 cut(s) 520
HpyAV CCTTC 9 cut(s) 56, 132, 144, 173, 588, 794, 818, 1335, 1457
HpyCH4III ACNGT 1 cut(s) 617
HpyCH4IV ACGT 4 cut(s) 306, 312, 843, 996
HpyCH4V TGCA 6 cut(s) 707, 952, 1087, 1117, 1408, 1500
HpyF3I CTNAG 7 cut(s) 426, 876, 946, 1010, 1109, 1251, 1565
HpySE526I ACGT 4 cut(s) 306, 312, 843, 996
Hsp92II CATG 8 cut(s) 305, 355, 409, 421, 565, 592, 894, 1450
HspAI GCGC 1 cut(s) 694
Ksp22I TGATCA 2 cut(s) 585, 981
LguI GCTCTTC 1 cut(s) 471
LmnI GCTCC 5 cut(s) 385, 451, 498, 1358, 1574
Lsp1109I GCAGC 2 cut(s) 695, 1347
LweI GCATC 2 cut(s) 246, 378
MaeI CTAG 1 cut(s) 773
MaeII ACGT 4 cut(s) 306, 312, 843, 996
MaeIII GTNAC 2 cut(s) 71, 456
MbiI CCGCTC 1 cut(s) 454
MflI RGATCY 4 cut(s) 288, 717, 780, 1246
MlsI TGGCCA 1 cut(s) 422
MluCI AATT 4 cut(s) 758, 802, 1256, 1547
MluNI TGGCCA 1 cut(s) 422
MlyI GAGTC 3 cut(s) 95, 353, 639
MmeI TCCRAC 3 cut(s) 460, 777, 831
Mox20I TGGCCA 1 cut(s) 422
MroXI GAANNNNTTC 1 cut(s) 674
MscI TGGCCA 1 cut(s) 422
MseI TTAA 7 cut(s) 1098, 1136, 1206, 1260, 1317, 1538, 1582
Msp20I TGGCCA 1 cut(s) 422
MspA1I CMGCKG 1 cut(s) 1338
MspCI CTTAAG 1 cut(s) 1316
MspI CCGG 2 cut(s) 1130, 1184
MspR9I CCNGG 1 cut(s) 1356
Mva1269I GAATGC 1 cut(s) 501
MvaI CCWGG 1 cut(s) 1356
MvnI CGCG 1 cut(s) 324
NlaIII CATG 8 cut(s) 305, 355, 409, 421, 565, 592, 894, 1450
NlaIV GGNNCC 2 cut(s) 782, 1387
NmeAIII GCCGAG 1 cut(s) 1000
NmuCI GTSAC 2 cut(s) 71, 456
NsbI TGCGCA 1 cut(s) 695
NspV TTCGAA 1 cut(s) 1512
PagI TCATGA 2 cut(s) 405, 561
PciSI GCTCTTC 1 cut(s) 471
PcsI WCGNNNNNNNCGW 1 cut(s) 466
PctI GAATGC 1 cut(s) 501
PdmI GAANNNNTTC 1 cut(s) 674
PfeI GAWTC 3 cut(s) 620, 1229, 1235
PfoI TCCNGGA 1 cut(s) 1354
PinAI ACCGGT 1 cut(s) 1129
PkrI GCNGC 2 cut(s) 685, 1337
PleI GAGTC 3 cut(s) 95, 352, 638
PpsI GAGTC 3 cut(s) 95, 352, 638
Psp1406I AACGTT 1 cut(s) 996
Psp6I CCWGG 1 cut(s) 1354
PspGI CCWGG 1 cut(s) 1354
PspN4I GGNNCC 2 cut(s) 782, 1387
PspPI GGNCC 2 cut(s) 218, 298
PsuI RGATCY 4 cut(s) 288, 717, 780, 1246
RsaI GTAC 2 cut(s) 215, 249
RsaNI GTAC 2 cut(s) 214, 248
SapI GCTCTTC 1 cut(s) 471
SaqAI TTAA 7 cut(s) 1098, 1136, 1206, 1260, 1317, 1538, 1582
SatI GCNGC 2 cut(s) 684, 1336
Sau96I GGNCC 2 cut(s) 218, 298
SchI GAGTC 3 cut(s) 95, 353, 639
ScrFI CCNGG 1 cut(s) 1356
SfaNI GCATC 2 cut(s) 246, 378
SfuI TTCGAA 1 cut(s) 1512
SinI GGWCC 1 cut(s) 218
SmlI CTYRAG 2 cut(s) 1001, 1316
SmoI CTYRAG 2 cut(s) 1001, 1316
Sse9I AATT 4 cut(s) 758, 802, 1256, 1547
SsiI CCGC 7 cut(s) 235, 324, 440, 454, 1338, 1389, 1490
SspMI CTAG 1 cut(s) 773
StyD4I CCNGG 1 cut(s) 1354
StyI CCWWGG 1 cut(s) 1366
TaaI ACNGT 1 cut(s) 617
TaiI ACGT 4 cut(s) 309, 315, 846, 999
TaqI TCGA 2 cut(s) 762, 1512
TasI AATT 4 cut(s) 758, 802, 1256, 1547
TfiI GAWTC 3 cut(s) 620, 1229, 1235
Tru1I TTAA 7 cut(s) 1098, 1136, 1206, 1260, 1317, 1538, 1582
Tru9I TTAA 7 cut(s) 1098, 1136, 1206, 1260, 1317, 1538, 1582
TscAI CASTG 3 cut(s) 954, 1098, 1415
TseFI GTSAC 2 cut(s) 71, 456
TseI GCWGC 2 cut(s) 683, 1335
Tsp45I GTSAC 2 cut(s) 71, 456
TspGWI ACGGA 5 cut(s) 231, 1018, 1156, 1494, 1542
TspRI CASTG 3 cut(s) 954, 1098, 1415
Vha464I CTTAAG 1 cut(s) 1316
VpaK11BI GGWCC 1 cut(s) 218
XapI RAATTY 4 cut(s) 758, 802, 1256, 1547
XmnI GAANNNNTTC 1 cut(s) 674
XspI CTAG 1 cut(s) 773
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.