Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0000895

Physical Location & Seq

Genomic Coordinates Forward (+)

1007436 .. 1009124

Gene Structure 1689 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG006800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1689 bp

ATGGCTATTATACTAACAGATGCACAATACTACCTATTTCTCTACTCCCTCGTATCATTTATCTCCATTTTGTTGCTCAAATCCCTGTTCAGAAAACCTCCGACCAACTCAAAAAACCCACCGCCGAGCCCACCGGCCCTACCGGTGATCGGTCACCTCCATCTCTTAAGCTCGGACCATCAAGCCATATCCTTCCTCAACCTCTCCACCAAACATGGGCCTCTCCTGGACCTCCGCCTCGGCGGTTCTCGGATGCTCCTCGTTTCCTCAGCCTCCTTCGCCGCCGACGTGTTCAAAACACAAGATCTCGCCTTCGCAGACCGCCCTGCATTCGCTTTCGCCGATGAACTGCCCTACGGAAACTCTGGATTTTTCGGTGCCGAGTACGGCGACTACTGGAAGTTCATGAAGAAACTCTGCATGACCGAACTGTTTGCCCCGCGGCAGCTGGAACGGTCACGCGCCAGTAGACAAGCAGAGATCGTCAAGTTCTGTCGTTCGATTATCGAAAGTGGTAACAAAAACGAAGTTGTGGATGTTGGGGCTGAGCTGATGAAGATGACCAACAATTCAACGTGCAAGATGGTGATGAGCACCAGCGTTTCGGAGAAAGGCGACGAGGCTGCCAGGATTAGGGAGATGATGATCAAGACGCTGCAGTTAGCCACGAAGGTGTCGTATGGGGATGTGTTGGGGCCTTTGAAGAGGTTGGGCTTCTGGCTTTATGGGACTCAGCTTGTGGATGTGTCGTTGAAGTACGATGAGCTTTTGGAGGAGATGTTAAAGGATCATGAAAAGAGAGAGGACGGAAATAAGAGAGTGGAGGAGGATCTGGATTTGGCCGACTTACTGTTGAAGGTGTATAAGGATGATAAGGCTGAGCTCAAAATTACCAGAACTCAAATCAAAGCCTTCTTGCTTGTAAGTAGTACTAGTTTACTTTTTAATTTTGTTTCAAGATCAAAGTTGGTAATTTCACCCTCAGAAAGTTGTGCAAAGCTTAACTGTGCTAAACATTGTTCATTGTGCCAGGATCTTTTCATCGGGGGCACTATTTCTTCAACAGAGACAATGCAATGGGCGATAGCCGAGCTCATAAACCACCCAGATGTATTCAAGAAGGTGAGAGAAGAGATCAATTCGGTTCTGGGTAATGCCTGCAGATTGGTCGAGGAAACAGACATTCCTAGTCTCCCTTATTTGCAAGCAGTTGTGAAGGAAGCATTGAGATTATACCCTCCTTCTCCTGTGGTGATAAGGAAAAGCCGCCAAAATTGTAAAATCAAAGGCTTTGATATAAATCAAGGAACCATGGTGGCAATCAATGTGTATGCAATTATGAGAGATCCAGAGATATGGGACAATCCCAATGAATTTCGTCCAGAGAGGTTCTTGGCTTCCTCTAGTGAAGGACATGATAGTGTGGATTATGATCAAAAGGAACAGAACTTCAATTTTGTGGCATTTGGTGGCGGGAGGAGACGTTGCCCCGGCTCGTCAGTGGCGCTTTTACTGGTGAACACTGCAGTTGCAGCCATGGTTCAATGCTTTGATTGGAAGGTTGGGGAAATAGGAGATGATGATGCTAAGGTTAATGTGCAGATTGGAGCAGGCATAAGTTTGCCAATGGCTTCCCCACTTCACTTGCGTCCTATCGTTCACTTCAACCCATTTGCCTCTTCTATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005911 GO:0006629 GO:0006720 GO:0006721 GO:0006722 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009506 GO:0009605 GO:0009606 GO:0009607 GO:0009620 GO:0009628 GO:0009629 GO:0009630 GO:0009812 GO:0009958 GO:0009987 GO:0010683 GO:0012505 GO:0016020 GO:0016491 GO:0016627 GO:0016705 GO:0016709 GO:0019748 GO:0022622 GO:0030054 GO:0032501 GO:0032502 GO:0042214 GO:0042440 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0046246 GO:0048364 GO:0048731 GO:0048856 GO:0050832 GO:0050896 GO:0051552 GO:0051554 GO:0051704 GO:0051707 GO:0055044 GO:0055114 GO:0071704 GO:0080003 GO:0080004 GO:0098542 GO:0099402 GO:1901360 GO:1901576 GO:1901615

KEGG Pathways

Metabolic & Signaling

ko00140 ko00380 ko00590 ko00591 ko00830 ko00980 ko01100 ko04212 ko04726 ko04750 ko04913 ko04917 ko04927 ko04934 ko05204 map00140 map00380 map00590 map00591 map00830 map00980 map01100 map04212 map04726 map04750 map04913 map04917 map04927 map04934 map05204

Pfam Domains

Protein Families

p450

Protein Analysis

562

Amino Acids

62.72

Weight (kDa)

6.81

Isoelectric Point (pI)

40.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	41 - 306	5.5e-23	Cytochrome P450
p450	PF00067	342 - 526	1.9e-55	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000895)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G28430 AT1G50520 AT1G50560 AT2G05180 AT2G14100 AT2G27000 AT2G27010 AT3G20080 AT3G20080 AT3G20080 AT3G20080 AT3G20080 AT3G20080 AT3G20090 AT3G20090 AT3G20100 AT3G20110 AT3G20120 AT3G20120 AT3G20120 AT3G20120 AT3G20130 AT3G20130 AT3G20140 AT3G20935 AT3G20940 AT3G20950 AT3G20960 AT3G20960 AT3G32047 AT4G15330 AT4G15330 AT4G15350 AT4G15360 AT4G15380 AT5G42580 AT5G47990
fragaria_vesca	FvH4_7g00640
malus_domestica	MD07G1006100.v1.1
prunus_persica	Prupe.2G008400_v2.0.a1 Prupe.2G008900_v2.0.a1 Prupe.4G287500_v2.0.a1
pyrus_communis	pycom07g00490
rosa_chinensis	RchiOBHm_Chr1g0314821 RchiOBHm_Chr1g0314871
rosa_laevigata	RLG00000030759 RLG00000030762
rosa_multiflora	Rmu_sc0002833.1_g000040 Rmu_sc0002833.1_g000046 Rmu_sc0010489.1_g000008 Rmu_sc0010489.1_g000015
rosa_roxburghii	Rroxscaffold_4G00331770 Rroxscaffold_4G00331860
rosa_rugosa	Rorug01G0002100 Rorug01G0002600
rosa_samantha	Rh1AG013000 Rh1AG013500 Rh1BG004600 Rh1BG005000 Rh1CG011500 Rh1CG011800 Rh1DG006300 Rh1DG006800
rosa_wichuraiana	Rw1G000560 Rw1G000610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	377
AccI	GTMKAC	1 cut(s)	469
AccII	CGCG	2 cut(s)	442, 462
AciI	CCGC	9 cut(s)	122, 235, 243, 282, 322, 440, 442, 1267, 1473
AclWI	GGATC	4 cut(s)	795, 837, 1041, 1340
AcoI	YGGCCR	1 cut(s)	840
AcsI	RAATTY	1 cut(s)	1373
AfaI	GTAC	3 cut(s)	386, 758, 931
AfiI	CCNNNNNNNGG	3 cut(s)	149, 216, 633
AflII	CTTAAG	1 cut(s)	166
AflIII	ACRYGT	1 cut(s)	288
AgeI	ACCGGT	1 cut(s)	142
AhlI	ACTAGT	1 cut(s)	932
AjiI	CACGTC	1 cut(s)	289
AjnI	CCWGG	3 cut(s)	225, 626, 1029
AleI	CACNNNNGTG	1 cut(s)	671
AluBI	AGCT	8 cut(s)	171, 448, 550, 736, 766, 883, 1000, 1093
AluI	AGCT	8 cut(s)	171, 448, 550, 736, 766, 883, 1000, 1093
Alw21I	GWGCWC	3 cut(s)	596, 885, 1095
Alw26I	GTCTC	3 cut(s)	1061, 1196, 1474
AlwI	GGATC	4 cut(s)	795, 837, 1041, 1340
AoxI	GGCC	4 cut(s)	135, 218, 695, 840
ApeKI	GCWGC	4 cut(s)	445, 623, 655, 1532
ApoI	RAATTY	1 cut(s)	1373
AsiGI	ACCGGT	1 cut(s)	142
AspLEI	GCGC	2 cut(s)	464, 1507
AspS9I	GGNCC	5 cut(s)	136, 175, 218, 229, 695
AsuC2I	CCSGG	1 cut(s)	1491
AsuHPI	GGTGA	7 cut(s)	146, 157, 598, 969, 1135, 1264, 1528
AvaII	GGWCC	2 cut(s)	175, 229
BaeGI	GKGCMC	1 cut(s)	1052
BanI	GGYRCC	1 cut(s)	377
BanII	GRGCYC	3 cut(s)	131, 885, 1095
Bbv12I	GWGCWC	3 cut(s)	596, 885, 1095
BbvCI	CCTCAGC	1 cut(s)	268
BbvI	GCAGC	4 cut(s)	457, 610, 642, 1544
BccI	CCATC	3 cut(s)	168, 186, 577
BceAI	ACGGC	1 cut(s)	403
BcgI	CGANNNNNNTGC	6 cut(s)	416, 450, 605, 639, 1150, 1184
BciT130I	CCWGG	3 cut(s)	227, 628, 1031
BclI	TGATCA	2 cut(s)	645, 1432
BcnI	CCSGG	1 cut(s)	1491
BcoDI	GTCTC	3 cut(s)	1061, 1196, 1474
BcuI	ACTAGT	1 cut(s)	932
BfaI	CTAG	3 cut(s)	933, 1188, 1404
BfmI	CTRYAG	3 cut(s)	656, 1159, 1524
BfoI	RGCGCY	1 cut(s)	1508
BfrI	CTTAAG	1 cut(s)	166
BglII	AGATCT	1 cut(s)	304
BisI	GCNGC	7 cut(s)	282, 443, 446, 624, 656, 1267, 1533
BlpI	GCTNAGC	2 cut(s)	546, 879
BlsI	GCNGC	7 cut(s)	283, 444, 447, 625, 657, 1268, 1534
BmcAI	AGTACT	1 cut(s)	931
Bme1390I	CCNGG	4 cut(s)	227, 628, 1031, 1491
Bme18I	GGWCC	2 cut(s)	175, 229
BmgBI	CACGTC	1 cut(s)	289
BmgT120I	GGNCC	5 cut(s)	136, 175, 218, 229, 695
BmiI	GGNNCC	3 cut(s)	379, 696, 1309
BmrFI	CCNGG	4 cut(s)	227, 628, 1031, 1491
BmsI	GCATC	3 cut(s)	10, 243, 1573
Bpu10I	CCTNAGC	2 cut(s)	268, 1587
Bpu1102I	GCTNAGC	2 cut(s)	546, 879
BpuMI	CCSGG	1 cut(s)	1491
BsaBI	GATNNNNATC	3 cut(s)	644, 1299, 1431
BsaJI	CCNNGG	5 cut(s)	238, 440, 1311, 1489, 1536
BsaWI	WCCGGW	1 cut(s)	142
BsaXI	ACNNNNNCTCC	4 cut(s)	764, 794, 1468, 1498
Bsc4I	CCNNNNNNNGG	3 cut(s)	149, 216, 633
Bse118I	RCCGGY	2 cut(s)	133, 142
Bse1I	ACTGG	3 cut(s)	401, 465, 1518
Bse3DI	GCAATG	1 cut(s)	1082
Bse8I	GATNNNNATC	3 cut(s)	644, 1299, 1431
BseBI	CCWGG	3 cut(s)	227, 628, 1031
BseDI	CCNNGG	5 cut(s)	238, 440, 1311, 1489, 1536
BseGI	GGATG	5 cut(s)	258, 541, 691, 748, 874
BseJI	GATNNNNATC	3 cut(s)	644, 1299, 1431
BseLI	CCNNNNNNNGG	3 cut(s)	149, 216, 633
BseMI	GCAATG	1 cut(s)	1082
BseMII	CTCAG	5 cut(s)	282, 537, 746, 870, 996
BseNI	ACTGG	3 cut(s)	401, 465, 1518
BseRI	GAGGAG	4 cut(s)	248, 788, 839, 1492
BseSI	GKGCMC	1 cut(s)	1052
BseXI	GCAGC	4 cut(s)	457, 610, 642, 1544
BsgI	GTGCAG	1 cut(s)	1619
Bsh1236I	CGCG	2 cut(s)	442, 462
BshFI	GGCC	4 cut(s)	137, 220, 697, 842
BshNI	GGYRCC	1 cut(s)	377
BshTI	ACCGGT	1 cut(s)	142
BsiHKAI	GWGCWC	3 cut(s)	596, 885, 1095
BsiSI	CCGG	3 cut(s)	134, 143, 1491
BslFI	GGGAC	2 cut(s)	742, 1373
BslI	CCNNNNNNNGG	3 cut(s)	149, 216, 633
BsmAI	GTCTC	3 cut(s)	1061, 1196, 1474
BsmBI	CGTCTC	1 cut(s)	1474
BsmFI	GGGAC	2 cut(s)	742, 1373
BsmI	GAATGC	1 cut(s)	329
BsnI	GGCC	4 cut(s)	137, 220, 697, 842
Bsp1286I	GDGCHC	5 cut(s)	131, 596, 885, 1052, 1095
Bsp1720I	GCTNAGC	2 cut(s)	546, 879
Bsp19I	CCATGG	2 cut(s)	1311, 1536
BspACI	CCGC	9 cut(s)	122, 235, 243, 282, 322, 440, 442, 1267, 1473
BspANI	GGCC	4 cut(s)	137, 220, 697, 842
BspCNI	CTCAG	5 cut(s)	281, 538, 745, 871, 995
BspFNI	CGCG	2 cut(s)	442, 462
BspHI	TCATGA	2 cut(s)	405, 790
BspLI	GGNNCC	3 cut(s)	379, 696, 1309
BspMAI	CTGCAG	3 cut(s)	660, 1163, 1528
BspPI	GGATC	4 cut(s)	795, 837, 1041, 1340
BspT107I	GGYRCC	1 cut(s)	377
BspTI	CTTAAG	1 cut(s)	166
BsrDI	GCAATG	1 cut(s)	1082
BsrFI	RCCGGY	2 cut(s)	133, 142
BsrI	ACTGG	3 cut(s)	401, 465, 1518
BssAI	RCCGGY	2 cut(s)	133, 142
BssECI	CCNNGG	5 cut(s)	238, 440, 1311, 1489, 1536
BssT1I	CCWWGG	2 cut(s)	1311, 1536
Bst2UI	CCWGG	3 cut(s)	227, 628, 1031
Bst4CI	ACNGT	4 cut(s)	432, 456, 852, 1007
Bst6I	CTCTTC	3 cut(s)	698, 1125, 1684
BstAFI	CTTAAG	1 cut(s)	166
BstC8I	GCNNGC	3 cut(s)	1159, 1206, 1612
BstDEI	CTNAG	6 cut(s)	268, 546, 732, 879, 982, 1587
BstDSI	CCRYGG	3 cut(s)	440, 1311, 1536
BstEII	GGTNACC	1 cut(s)	152
BstF5I	GGATG	5 cut(s)	258, 541, 691, 748, 874
BstFNI	CGCG	2 cut(s)	442, 462
BstH2I	RGCGCY	1 cut(s)	1508
BstHHI	GCGC	2 cut(s)	464, 1507
BstMAI	GTCTC	3 cut(s)	1061, 1196, 1474
BstMWI	GCNNNNNNNGC	2 cut(s)	278, 1532
BstNI	CCWGG	3 cut(s)	227, 628, 1031
BstPI	GGTNACC	1 cut(s)	152
BstSCI	CCNGG	4 cut(s)	225, 626, 1029, 1489
BstSFI	CTRYAG	3 cut(s)	656, 1159, 1524
BstSLI	GKGCMC	1 cut(s)	1052
BstUI	CGCG	2 cut(s)	442, 462
BstV1I	GCAGC	4 cut(s)	457, 610, 642, 1544
BstX2I	RGATCY	4 cut(s)	304, 829, 1033, 1345
BstXI	CCANNNNNNTGG	1 cut(s)	1356
BstYI	RGATCY	4 cut(s)	304, 829, 1033, 1345
BsuRI	GGCC	4 cut(s)	137, 220, 697, 842
BtgI	CCRYGG	3 cut(s)	440, 1311, 1536
BtrI	CACGTC	1 cut(s)	289
BtsCI	GGATG	5 cut(s)	258, 541, 691, 748, 874
BtsI	GCAGTG	1 cut(s)	1521
BtsIMutI	CAGTG	2 cut(s)	1506, 1521
Cac8I	GCNNGC	3 cut(s)	1159, 1206, 1612
CciI	TCATGA	2 cut(s)	405, 790
CfoI	GCGC	2 cut(s)	464, 1507
Cfr10I	RCCGGY	2 cut(s)	133, 142
Cfr13I	GGNCC	5 cut(s)	136, 175, 218, 229, 695
Cfr42I	CCGCGG	1 cut(s)	443
CseI	GACGC	2 cut(s)	661, 1637
Csp6I	GTAC	3 cut(s)	385, 757, 930
CspAI	ACCGGT	1 cut(s)	142
CspCI	CAANNNNNGTGG	2 cut(s)	1626, 1661
CviAII	CATG	7 cut(s)	215, 406, 421, 791, 1312, 1415, 1537
CviQI	GTAC	3 cut(s)	385, 757, 930
DdeI	CTNAG	6 cut(s)	268, 546, 732, 879, 982, 1587
EaeI	YGGCCR	1 cut(s)	840
Eam1104I	CTCTTC	3 cut(s)	698, 1125, 1684
EarI	CTCTTC	3 cut(s)	698, 1125, 1684
EciI	GGCGGA	1 cut(s)	224
Ecl136II	GAGCTC	2 cut(s)	883, 1093
Eco130I	CCWWGG	2 cut(s)	1311, 1536
Eco24I	GRGCYC	3 cut(s)	131, 885, 1095
Eco47I	GGWCC	2 cut(s)	175, 229
Eco53kI	GAGCTC	2 cut(s)	883, 1093
Eco91I	GGTNACC	1 cut(s)	152
EcoICRI	GAGCTC	2 cut(s)	883, 1093
EcoO109I	RGGNCCY	1 cut(s)	695
EcoO65I	GGTNACC	1 cut(s)	152
EcoRII	CCWGG	3 cut(s)	225, 626, 1029
EcoT14I	CCWWGG	2 cut(s)	1311, 1536
EcoT38I	GRGCYC	3 cut(s)	131, 885, 1095
ErhI	CCWWGG	2 cut(s)	1311, 1536
Esp3I	CGTCTC	1 cut(s)	1474
FaeI	CATG	7 cut(s)	218, 409, 424, 794, 1315, 1418, 1540
FaqI	GGGAC	2 cut(s)	742, 1373
FatI	CATG	7 cut(s)	214, 405, 420, 790, 1311, 1414, 1536
FauI	CCCGC	2 cut(s)	447, 1466
FbaI	TGATCA	2 cut(s)	645, 1432
FblI	GTMKAC	1 cut(s)	469
Fnu4HI	GCNGC	7 cut(s)	282, 443, 446, 624, 656, 1267, 1533
FokI	GGATG	5 cut(s)	265, 548, 698, 755, 881
FriOI	GRGCYC	3 cut(s)	131, 885, 1095
Fsp4HI	GCNGC	7 cut(s)	282, 443, 446, 624, 656, 1267, 1533
FspBI	CTAG	3 cut(s)	933, 1188, 1404
GlaI	GCGC	2 cut(s)	463, 1506
GluI	GCNGC	7 cut(s)	282, 443, 446, 624, 656, 1267, 1533
HaeII	RGCGCY	1 cut(s)	1508
HaeIII	GGCC	4 cut(s)	137, 220, 697, 842
HapII	CCGG	3 cut(s)	134, 143, 1491
HgaI	GACGC	2 cut(s)	661, 1637
HhaI	GCGC	2 cut(s)	464, 1507
Hin1II	CATG	7 cut(s)	218, 409, 424, 794, 1315, 1418, 1540
Hin6I	GCGC	2 cut(s)	462, 1505
HinP1I	GCGC	2 cut(s)	462, 1505
HindIII	AAGCTT	1 cut(s)	998
HinfI	GANTC	1 cut(s)	730
HpaII	CCGG	3 cut(s)	134, 143, 1491
HphI	GGTGA	7 cut(s)	146, 157, 598, 969, 1135, 1264, 1528
Hpy166II	GTNNAC	4 cut(s)	470, 938, 1519, 1660
Hpy188I	TCNGA	6 cut(s)	92, 102, 175, 252, 607, 985
Hpy188III	TCNNGA	9 cut(s)	366, 406, 649, 791, 833, 957, 1117, 1349, 1382
Hpy8I	GTNNAC	4 cut(s)	470, 938, 1519, 1660
Hpy99I	CGWCG	2 cut(s)	290, 620
HpyCH4III	ACNGT	4 cut(s)	432, 456, 852, 1007
HpyCH4IV	ACGT	3 cut(s)	288, 575, 1483
HpyF10VI	GCNNNNNNNGC	2 cut(s)	278, 1532
HpyF3I	CTNAG	6 cut(s)	268, 546, 732, 879, 982, 1587
HpySE526I	ACGT	3 cut(s)	288, 575, 1483
Hsp92II	CATG	7 cut(s)	218, 409, 424, 794, 1315, 1418, 1540
HspAI	GCGC	2 cut(s)	462, 1505
Ksp22I	TGATCA	2 cut(s)	645, 1432
KspI	CCGCGG	1 cut(s)	443
LmnI	GCTCC	2 cut(s)	261, 1607
Lsp1109I	GCAGC	4 cut(s)	457, 610, 642, 1544
LweI	GCATC	3 cut(s)	10, 243, 1573
MaeI	CTAG	3 cut(s)	933, 1188, 1404
MaeII	ACGT	3 cut(s)	288, 575, 1483
MaeIII	GTNAC	3 cut(s)	152, 456, 515
MboII	GAAGA	6 cut(s)	421, 568, 715, 1050, 1142, 1671
MflI	RGATCY	4 cut(s)	304, 829, 1033, 1345
MhlI	GDGCHC	5 cut(s)	131, 596, 885, 1052, 1095
MluCI	AATT	9 cut(s)	568, 888, 946, 972, 1138, 1273, 1335, 1373, 1453
MlyI	GAGTC	1 cut(s)	724
MmeI	TCCRAC	1 cut(s)	125
MseI	TTAA	5 cut(s)	167, 782, 945, 1002, 1593
MslI	CAYNNNNRTG	3 cut(s)	671, 1107, 1419
MspA1I	CMGCKG	2 cut(s)	442, 448
MspCI	CTTAAG	1 cut(s)	166
MspI	CCGG	3 cut(s)	134, 143, 1491
MspR9I	CCNGG	4 cut(s)	227, 628, 1031, 1491
Mva1269I	GAATGC	1 cut(s)	329
MvaI	CCWGG	3 cut(s)	227, 628, 1031
MvnI	CGCG	2 cut(s)	442, 462
MwoI	GCNNNNNNNGC	2 cut(s)	278, 1532
NciI	CCSGG	1 cut(s)	1491
NcoI	CCATGG	2 cut(s)	1311, 1536
NlaIII	CATG	7 cut(s)	218, 409, 424, 794, 1315, 1418, 1540
NlaIV	GGNNCC	3 cut(s)	379, 696, 1309
NmeAIII	GCCGAG	4 cut(s)	150, 219, 406, 1114
NmuCI	GTSAC	2 cut(s)	152, 456
OliI	CACNNNNGTG	1 cut(s)	671
PagI	TCATGA	2 cut(s)	405, 790
PcsI	WCGNNNNNNNCGW	3 cut(s)	285, 339, 674
PctI	GAATGC	1 cut(s)	329
PfoI	TCCNGGA	1 cut(s)	225
PinAI	ACCGGT	1 cut(s)	142
PkrI	GCNGC	7 cut(s)	283, 444, 447, 625, 657, 1268, 1534
PleI	GAGTC	1 cut(s)	724
PpsI	GAGTC	1 cut(s)	724
Psp124BI	GAGCTC	2 cut(s)	885, 1095
Psp6I	CCWGG	3 cut(s)	225, 626, 1029
PspEI	GGTNACC	1 cut(s)	152
PspGI	CCWGG	3 cut(s)	225, 626, 1029
PspN4I	GGNNCC	3 cut(s)	379, 696, 1309
PspPI	GGNCC	5 cut(s)	136, 175, 218, 229, 695
PstI	CTGCAG	3 cut(s)	660, 1163, 1528
PsuI	RGATCY	4 cut(s)	304, 829, 1033, 1345
PvuII	CAGCTG	1 cut(s)	448
RsaI	GTAC	3 cut(s)	386, 758, 931
RsaNI	GTAC	3 cut(s)	385, 757, 930
RseI	CAYNNNNRTG	3 cut(s)	671, 1107, 1419
SacI	GAGCTC	2 cut(s)	885, 1095
SacII	CCGCGG	1 cut(s)	443
SaqAI	TTAA	5 cut(s)	167, 782, 945, 1002, 1593
SatI	GCNGC	7 cut(s)	282, 443, 446, 624, 656, 1267, 1533
Sau96I	GGNCC	5 cut(s)	136, 175, 218, 229, 695
ScaI	AGTACT	1 cut(s)	931
SchI	GAGTC	1 cut(s)	724
ScrFI	CCNGG	4 cut(s)	227, 628, 1031, 1491
SduI	GDGCHC	5 cut(s)	131, 596, 885, 1052, 1095
SfaNI	GCATC	3 cut(s)	10, 243, 1573
SfcI	CTRYAG	3 cut(s)	656, 1159, 1524
Sfr303I	CCGCGG	1 cut(s)	443
SgrBI	CCGCGG	1 cut(s)	443
SinI	GGWCC	2 cut(s)	175, 229
SmiMI	CAYNNNNRTG	3 cut(s)	671, 1107, 1419
SmlI	CTYRAG	1 cut(s)	166
SmoI	CTYRAG	1 cut(s)	166
SpeI	ACTAGT	1 cut(s)	932
Sse9I	AATT	9 cut(s)	568, 888, 946, 972, 1138, 1273, 1335, 1373, 1453
SsiI	CCGC	9 cut(s)	122, 235, 243, 282, 322, 440, 442, 1267, 1473
SspMI	CTAG	3 cut(s)	933, 1188, 1404
SstI	GAGCTC	2 cut(s)	885, 1095
StyD4I	CCNGG	4 cut(s)	225, 626, 1029, 1489
StyI	CCWWGG	2 cut(s)	1311, 1536
TaaI	ACNGT	4 cut(s)	432, 456, 852, 1007
TaiI	ACGT	3 cut(s)	291, 578, 1486
TaqI	TCGA	3 cut(s)	500, 507, 1170
TaqII	GACCGA	2 cut(s)	140, 440
TasI	AATT	9 cut(s)	568, 888, 946, 972, 1138, 1273, 1335, 1373, 1453
TatI	WGTACW	1 cut(s)	929
TauI	GCSGC	3 cut(s)	284, 445, 1269
Tru1I	TTAA	5 cut(s)	167, 782, 945, 1002, 1593
Tru9I	TTAA	5 cut(s)	167, 782, 945, 1002, 1593
TscAI	CASTG	2 cut(s)	1506, 1528
TseFI	GTSAC	2 cut(s)	152, 456
TseI	GCWGC	4 cut(s)	445, 623, 655, 1532
Tsp45I	GTSAC	2 cut(s)	152, 456
TspDTI	ATGAA	8 cut(s)	360, 394, 422, 569, 807, 1011, 1030, 1386
TspGWI	ACGGA	2 cut(s)	372, 822
TspRI	CASTG	2 cut(s)	1506, 1528
Vha464I	CTTAAG	1 cut(s)	166
VpaK11BI	GGWCC	2 cut(s)	175, 229
XapI	RAATTY	1 cut(s)	1373
XmiI	GTMKAC	1 cut(s)	469
XspI	CTAG	3 cut(s)	933, 1188, 1404
ZrmI	AGTACT	1 cut(s)	931

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.