Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0000895

Physical Location & Seq

Genomic Coordinates Forward (+)

592016 .. 595418

Gene Structure 3403 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1006100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1599 bp

ATGGCAACAACAAACGATGCCCAATACTATCTTCTCTACTTCCTTATATGCTATCTCTCGACCCTCTTACTTAGATCCTTGTTCAACAAGTATTCCCCCAAGTCAGCCACTCAAGTTCGTCCTCCACCTAGCCCACCGGCCCTCCCATTAATCGGCCACCTCCACCATCTAACCACAGCTCACCAGGCCATCTCCTTCCAAAACCTCTCCACCAAATATGGCCCTCTCCTCCACCTCCGCCTCGGCGCCTCTCGAATGCTCCTCGTCTCCTCCGCCTCCGTGGCCACCGACGTCTTCAAAACCCAAGACCTCTCCTTTGCGGATCGCCCGGCATTTGCTTTCGCGGACGAACTTCCCTACGGAAACTCGGGTTTCTTCGGCGCTGTGTACGGTGACTATTGGAAGTTCATGAAGAAGCTCTGCATGACGGAACTGTTCGCGCCGCGGCAGCTCGAACGCTCGCGCAATACTAGACAAGTAGAAATTGGTAAGCTTTGTGAGAAGTTGGTCGAGAGTGCTAAAAAGAAGGAGGTGGTTGATTTGGGAAGCGAGCTCATGAAGCTTACGAACAACTCCACTTGCAAGATGGTGATGAGTACTAGTTGCTCGGAGAATGGCGACGAGGCTGCGAGGATAAGGAAGATGATGATGAGGACGCTACGGCTGGCGACCAAGGTTTCTTATGGGGATGTGCTGGGGCCGTTGAAGAGGCTAGGCTTTTGGCTCTATGGGAAGCAGCTTGCGGACGTGTCGTGGGAGTTTGATGAGCTTTTTGAGAAGATGCTGAAGGAGCATGAAAAGAAAGGGGAGAGAGAGGGCTGGGAGAGAGAGGATTTGGATTTGATCGACTTGCTTTTGAAGGAGTATCAAGATGACAAGGCTGAGCTTAAAATTACCAGAACTCAGATTAAAGCTTTCTTGCTTGACCTATTTATTGGGGGCACACTTTCATCAACAGAGACCATGCAATGGACGATGGCCGAACTCATCAACCATCCTCAGGTATTCAACAAGGTCAGACAAGAGATAAAATCGGTAGTAGGCAACGCCAGATTGGTCGAGGAAACCGACATTACAAATCTCCCATACTTACAAGCCGTTGTGAAGGAAGCATTGAGAATGTACCCTCCATCTCCGGTGGTGATACGAAAATGCCGCCAAGACTGTAAAATCAAGGGCTTTGACATACCCCAAGGAGTTACGGTGGCAAACAATGTGTATGCAATAATGCGAGATCCGGAGATTTGGGACAGCCCTGATGAATTTCGTCCGGAGAGGTTCTTGGCTTCCTCTAGTGAAGTACATGATAGTGTGGAATATGATGACCAAAGTCATCAACACAAGGAACAGAACTTCAATTATGTGCCGTTTGGCGGTGGCAGAAGGCGTTGCCCTGGCTCTGCGGTGGCGCTTCTGTTGGTGAACACCGCAGTTGCAACCCTGGTTCAATGCTTTGATTGGAAGGTTGGGGGAAACGAAAATGGTGATGTAGCCAACAAGGTTAATATGGAGATAGGACCCGGCATAAGTTTACCAATGGCACACACACTTGAACTACTTCCTATCATTCACTTCAGCCCATTTGCTTCTTCTATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005911 GO:0006629 GO:0006720 GO:0006721 GO:0006722 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009506 GO:0009605 GO:0009606 GO:0009607 GO:0009620 GO:0009628 GO:0009629 GO:0009630 GO:0009812 GO:0009958 GO:0009987 GO:0010683 GO:0012505 GO:0016020 GO:0016491 GO:0016627 GO:0016705 GO:0016709 GO:0019748 GO:0022622 GO:0030054 GO:0032501 GO:0032502 GO:0042214 GO:0042440 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0046246 GO:0048364 GO:0048731 GO:0048856 GO:0050832 GO:0050896 GO:0051552 GO:0051554 GO:0051704 GO:0051707 GO:0055044 GO:0055114 GO:0071704 GO:0080003 GO:0080004 GO:0098542 GO:0099402 GO:1901360 GO:1901576 GO:1901615

KEGG Pathways

Metabolic & Signaling

ko00140 ko00380 ko00590 ko00591 ko00830 ko00980 ko01100 ko04212 ko04726 ko04750 ko04913 ko04917 ko04927 ko04934 ko05204 map00140 map00380 map00590 map00591 map00830 map00980 map01100 map04212 map04726 map04750 map04913 map04917 map04927 map04934 map05204

Pfam Domains

Protein Families

p450

Protein Analysis

533

Amino Acids

60.21

Weight (kDa)

6.87

Isoelectric Point (pI)

39.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	42 - 493	9.4e-93	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000895)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G28430 AT1G50520 AT1G50560 AT2G05180 AT2G14100 AT2G27000 AT2G27010 AT3G20080 AT3G20080 AT3G20080 AT3G20080 AT3G20080 AT3G20080 AT3G20090 AT3G20090 AT3G20100 AT3G20110 AT3G20120 AT3G20120 AT3G20120 AT3G20120 AT3G20130 AT3G20130 AT3G20140 AT3G20935 AT3G20940 AT3G20950 AT3G20960 AT3G20960 AT3G32047 AT4G15330 AT4G15330 AT4G15350 AT4G15360 AT4G15380 AT5G42580 AT5G47990
fragaria_vesca	FvH4_7g00640
malus_domestica	MD07G1006100.v1.1
prunus_persica	Prupe.2G008400_v2.0.a1 Prupe.2G008900_v2.0.a1 Prupe.4G287500_v2.0.a1
pyrus_communis	pycom07g00490
rosa_chinensis	RchiOBHm_Chr1g0314821 RchiOBHm_Chr1g0314871
rosa_laevigata	RLG00000030759 RLG00000030762
rosa_multiflora	Rmu_sc0002833.1_g000040 Rmu_sc0002833.1_g000046 Rmu_sc0010489.1_g000008 Rmu_sc0010489.1_g000015
rosa_roxburghii	Rroxscaffold_4G00331770 Rroxscaffold_4G00331860
rosa_rugosa	Rorug01G0002100 Rorug01G0002600
rosa_samantha	Rh1AG013000 Rh1AG013500 Rh1BG004600 Rh1BG005000 Rh1CG011500 Rh1CG011800 Rh1DG006300 Rh1DG006800
rosa_wichuraiana	Rw1G000560 Rw1G000610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	294
AccB1I	GGYRCC	1 cut(s)	245
AccB7I	CCANNNNNTGG	1 cut(s)	969
AccII	CGCG	4 cut(s)	344, 440, 445, 463
AccIII	TCCGGA	2 cut(s)	1237, 1270
AclWI	GGATC	3 cut(s)	69, 330, 1229
AcoI	YGGCCR	3 cut(s)	154, 282, 978
AcsI	RAATTY	1 cut(s)	1262
AcuI	CTGAAG	2 cut(s)	806, 1558
AcyI	GRCGYC	2 cut(s)	246, 291
AfaI	GTAC	4 cut(s)	389, 598, 1124, 1302
AfiI	CCNNNNNNNGG	4 cut(s)	152, 969, 1000, 1373
AflIII	ACRYGT	1 cut(s)	747
AgsI	TTSAA	8 cut(s)	85, 298, 706, 859, 1009, 1357, 1448, 1553
AhlI	ACTAGT	1 cut(s)	599
AjiI	CACGTC	1 cut(s)	748
AjnI	CCWGG	3 cut(s)	183, 1393, 1440
AjuI	GAANNNNNNNTTGG	2 cut(s)	15, 47
Alw21I	GWGCWC	1 cut(s)	555
Alw26I	GTCTC	2 cut(s)	271, 953
AlwI	GGATC	3 cut(s)	69, 330, 1229
Ama87I	CYCGRG	1 cut(s)	367
Aor13HI	TCCGGA	2 cut(s)	1237, 1270
AoxI	GGCC	7 cut(s)	138, 154, 186, 220, 282, 698, 978
ApeKI	GCWGC	3 cut(s)	448, 626, 736
ApoI	RAATTY	1 cut(s)	1262
ArsI	GACNNNNNNTTYG	2 cut(s)	299, 331
AseI	ATTAAT	1 cut(s)	149
Asp700I	GAANNNNTTC	1 cut(s)	1557
AspLEI	GCGC	5 cut(s)	248, 383, 442, 465, 1411
AspS9I	GGNCC	4 cut(s)	139, 221, 698, 1517
AsuC2I	CCSGG	2 cut(s)	329, 1521
AsuHPI	GGTGA	6 cut(s)	173, 404, 601, 1153, 1432, 1496
AvaI	CYCGRG	1 cut(s)	367
AvaII	GGWCC	1 cut(s)	1517
AxyI	CCTNAGG	1 cut(s)	999
BaeGI	GKGCMC	1 cut(s)	944
BalI	TGGCCA	1 cut(s)	284
BanI	GGYRCC	1 cut(s)	245
BanII	GRGCYC	1 cut(s)	555
BbsI	GAAGAC	1 cut(s)	286
Bbv12I	GWGCWC	1 cut(s)	555
BbvI	GCAGC	3 cut(s)	460, 613, 748
BccI	CCATC	6 cut(s)	174, 197, 580, 970, 1002, 1138
BceAI	ACGGC	4 cut(s)	677, 685, 1082, 1351
BcgI	CGANNNNNNTGC	2 cut(s)	608, 642
BciT130I	CCWGG	3 cut(s)	185, 1395, 1442
BcnI	CCSGG	2 cut(s)	329, 1521
BcoDI	GTCTC	2 cut(s)	271, 953
BcuI	ACTAGT	1 cut(s)	599
BfaI	CTAG	5 cut(s)	129, 471, 600, 713, 1293
BfoI	RGCGCY	3 cut(s)	249, 384, 1412
BglI	GCCNNNNNGGC	1 cut(s)	281
BisI	GCNGC	6 cut(s)	443, 446, 449, 627, 737, 1156
BlpI	GCTNAGC	1 cut(s)	882
BlsI	GCNGC	6 cut(s)	444, 447, 450, 628, 738, 1157
BmcAI	AGTACT	1 cut(s)	598
Bme1390I	CCNGG	5 cut(s)	185, 329, 1395, 1442, 1521
Bme18I	GGWCC	1 cut(s)	1517
BmeT110I	CYCGRG	1 cut(s)	367
BmgBI	CACGTC	1 cut(s)	748
BmgT120I	GGNCC	4 cut(s)	139, 221, 698, 1517
BmiI	GGNNCC	3 cut(s)	247, 699, 1519
BmrFI	CCNGG	5 cut(s)	185, 329, 1395, 1442, 1521
BmsI	GCATC	2 cut(s)	7, 771
BoxI	GACNNNNGTC	1 cut(s)	1329
BpiI	GAAGAC	1 cut(s)	286
Bpu1102I	GCTNAGC	1 cut(s)	882
BpuEI	CTTGAG	1 cut(s)	96
BpuMI	CCSGG	2 cut(s)	329, 1521
BsaHI	GRCGYC	2 cut(s)	246, 291
BsaI	GGTCTC	1 cut(s)	953
BsaJI	CCNNGG	7 cut(s)	241, 279, 443, 672, 1192, 1393, 1440
BsaWI	WCCGGW	3 cut(s)	1135, 1237, 1270
BsaXI	ACNNNNNCTCC	4 cut(s)	126, 156, 1188, 1218
Bsc4I	CCNNNNNNNGG	4 cut(s)	152, 969, 1000, 1373
Bse118I	RCCGGY	1 cut(s)	136
Bse21I	CCTNAGG	1 cut(s)	999
Bse3DI	GCAATG	1 cut(s)	974
BseAI	TCCGGA	2 cut(s)	1237, 1270
BseBI	CCWGG	3 cut(s)	185, 1395, 1442
BseDI	CCNNGG	7 cut(s)	241, 279, 443, 672, 1192, 1393, 1440
BseGI	GGATG	2 cut(s)	694, 994
BseLI	CCNNNNNNNGG	4 cut(s)	152, 969, 1000, 1373
BseMI	GCAATG	1 cut(s)	974
BseMII	CTCAG	3 cut(s)	873, 917, 1013
BseRI	GAGGAG	3 cut(s)	218, 251, 259
BseSI	GKGCMC	1 cut(s)	944
BseXI	GCAGC	3 cut(s)	460, 613, 748
BseYI	CCCAGC	2 cut(s)	694, 819
Bsh1236I	CGCG	4 cut(s)	344, 440, 445, 463
BshFI	GGCC	7 cut(s)	140, 156, 188, 222, 284, 700, 980
BshNI	GGYRCC	1 cut(s)	245
BsiHKAI	GWGCWC	1 cut(s)	555
BsiHKCI	CYCGRG	1 cut(s)	367
BsiSI	CCGG	6 cut(s)	137, 329, 1136, 1238, 1271, 1521
BslFI	GGGAC	1 cut(s)	1262
BslI	CCNNNNNNNGG	4 cut(s)	152, 969, 1000, 1373
BsmAI	GTCTC	2 cut(s)	271, 953
BsmBI	CGTCTC	1 cut(s)	271
BsmFI	GGGAC	1 cut(s)	1262
BsmI	GAATGC	1 cut(s)	261
BsnI	GGCC	7 cut(s)	140, 156, 188, 222, 284, 700, 980
Bso31I	GGTCTC	1 cut(s)	953
BsoBI	CYCGRG	1 cut(s)	367
Bsp1286I	GDGCHC	2 cut(s)	555, 944
Bsp13I	TCCGGA	2 cut(s)	1237, 1270
Bsp143I	GATC	4 cut(s)	74, 322, 843, 1234
Bsp1720I	GCTNAGC	1 cut(s)	882
BspANI	GGCC	7 cut(s)	140, 156, 188, 222, 284, 700, 980
BspCNI	CTCAG	3 cut(s)	874, 916, 1012
BspEI	TCCGGA	2 cut(s)	1237, 1270
BspFNI	CGCG	4 cut(s)	344, 440, 445, 463
BspHI	TCATGA	2 cut(s)	408, 555
BspLI	GGNNCC	3 cut(s)	247, 699, 1519
BspPI	GGATC	3 cut(s)	69, 330, 1229
BspT107I	GGYRCC	1 cut(s)	245
BspTNI	GGTCTC	1 cut(s)	953
BsrDI	GCAATG	1 cut(s)	974
BsrFI	RCCGGY	1 cut(s)	136
BssAI	RCCGGY	1 cut(s)	136
BssECI	CCNNGG	7 cut(s)	241, 279, 443, 672, 1192, 1393, 1440
BssMI	GATC	4 cut(s)	74, 322, 843, 1234
BssNI	GRCGYC	2 cut(s)	246, 291
BssT1I	CCWWGG	2 cut(s)	672, 1192
Bst2UI	CCWGG	3 cut(s)	185, 1395, 1442
Bst4CI	ACNGT	4 cut(s)	392, 435, 1166, 1204
Bst6I	CTCTTC	1 cut(s)	701
BstACI	GRCGYC	2 cut(s)	246, 291
BstC8I	GCNNGC	4 cut(s)	461, 551, 666, 741
BstDEI	CTNAG	4 cut(s)	71, 882, 903, 999
BstDSI	CCRYGG	2 cut(s)	279, 443
BstF5I	GGATG	2 cut(s)	694, 994
BstFNI	CGCG	4 cut(s)	344, 440, 445, 463
BstH2I	RGCGCY	3 cut(s)	249, 384, 1412
BstHHI	GCGC	5 cut(s)	248, 383, 442, 465, 1411
BstKTI	GATC	4 cut(s)	77, 325, 846, 1237
BstMAI	GTCTC	2 cut(s)	271, 953
BstMBI	GATC	4 cut(s)	74, 322, 843, 1234
BstMWI	GCNNNNNNNGC	5 cut(s)	185, 281, 448, 559, 790
BstNI	CCWGG	3 cut(s)	185, 1395, 1442
BstPAI	GACNNNNGTC	1 cut(s)	1329
BstSCI	CCNGG	5 cut(s)	183, 327, 1393, 1440, 1519
BstSLI	GKGCMC	1 cut(s)	944
BstUI	CGCG	4 cut(s)	344, 440, 445, 463
BstV1I	GCAGC	3 cut(s)	460, 613, 748
BstV2I	GAAGAC	1 cut(s)	286
BstX2I	RGATCY	2 cut(s)	74, 1234
BstYI	RGATCY	2 cut(s)	74, 1234
Bsu36I	CCTNAGG	1 cut(s)	999
BsuRI	GGCC	7 cut(s)	140, 156, 188, 222, 284, 700, 980
BtgI	CCRYGG	2 cut(s)	279, 443
BtrI	CACGTC	1 cut(s)	748
BtsCI	GGATG	2 cut(s)	694, 994
Cac8I	GCNNGC	4 cut(s)	461, 551, 666, 741
CciI	TCATGA	2 cut(s)	408, 555
CfoI	GCGC	5 cut(s)	248, 383, 442, 465, 1411
Cfr10I	RCCGGY	1 cut(s)	136
Cfr13I	GGNCC	4 cut(s)	139, 221, 698, 1517
Cfr42I	CCGCGG	1 cut(s)	446
CseI	GACGC	1 cut(s)	664
Csp6I	GTAC	4 cut(s)	388, 597, 1123, 1301
CviAII	CATG	6 cut(s)	409, 424, 556, 794, 964, 1304
CviQI	GTAC	4 cut(s)	388, 597, 1123, 1301
DdeI	CTNAG	4 cut(s)	71, 882, 903, 999
DinI	GGCGCC	1 cut(s)	247
DpnI	GATC	4 cut(s)	76, 324, 845, 1236
DpnII	GATC	4 cut(s)	74, 322, 843, 1234
EaeI	YGGCCR	3 cut(s)	154, 282, 978
Eam1104I	CTCTTC	1 cut(s)	701
EarI	CTCTTC	1 cut(s)	701
EciI	GGCGGA	2 cut(s)	227, 262
Ecl136II	GAGCTC	1 cut(s)	553
Eco130I	CCWWGG	2 cut(s)	672, 1192
Eco24I	GRGCYC	1 cut(s)	555
Eco31I	GGTCTC	1 cut(s)	953
Eco47I	GGWCC	1 cut(s)	1517
Eco53kI	GAGCTC	1 cut(s)	553
Eco57I	CTGAAG	2 cut(s)	806, 1558
Eco81I	CCTNAGG	1 cut(s)	999
Eco88I	CYCGRG	1 cut(s)	367
EcoICRI	GAGCTC	1 cut(s)	553
EcoO109I	RGGNCCY	1 cut(s)	1517
EcoRII	CCWGG	3 cut(s)	183, 1393, 1440
EcoT14I	CCWWGG	2 cut(s)	672, 1192
EcoT38I	GRGCYC	1 cut(s)	555
EgeI	GGCGCC	1 cut(s)	247
EheI	GGCGCC	1 cut(s)	247
ErhI	CCWWGG	2 cut(s)	672, 1192
Esp3I	CGTCTC	1 cut(s)	271
FaeI	CATG	6 cut(s)	412, 427, 559, 797, 967, 1307
FaqI	GGGAC	1 cut(s)	1262
FatI	CATG	6 cut(s)	408, 423, 555, 793, 963, 1303
Fnu4HI	GCNGC	6 cut(s)	443, 446, 449, 627, 737, 1156
FokI	GGATG	2 cut(s)	701, 981
FriOI	GRGCYC	1 cut(s)	555
Fsp4HI	GCNGC	6 cut(s)	443, 446, 449, 627, 737, 1156
FspBI	CTAG	5 cut(s)	129, 471, 600, 713, 1293
GlaI	GCGC	5 cut(s)	247, 382, 441, 464, 1410
GluI	GCNGC	6 cut(s)	443, 446, 449, 627, 737, 1156
GsaI	CCCAGC	2 cut(s)	698, 823
HaeII	RGCGCY	3 cut(s)	249, 384, 1412
HaeIII	GGCC	7 cut(s)	140, 156, 188, 222, 284, 700, 980
HapII	CCGG	6 cut(s)	137, 329, 1136, 1238, 1271, 1521
HgaI	GACGC	1 cut(s)	664
HhaI	GCGC	5 cut(s)	248, 383, 442, 465, 1411
Hin1I	GRCGYC	2 cut(s)	246, 291
Hin1II	CATG	6 cut(s)	412, 427, 559, 797, 967, 1307
Hin6I	GCGC	5 cut(s)	246, 381, 440, 463, 1409
HinP1I	GCGC	5 cut(s)	246, 381, 440, 463, 1409
HindIII	AAGCTT	3 cut(s)	491, 560, 912
HpaII	CCGG	6 cut(s)	137, 329, 1136, 1238, 1271, 1521
HphI	GGTGA	6 cut(s)	173, 404, 601, 1153, 1432, 1496
Hpy166II	GTNNAC	3 cut(s)	388, 1423, 1532
Hpy188I	TCNGA	3 cut(s)	610, 906, 1019
Hpy188III	TCNNGA	8 cut(s)	58, 252, 409, 511, 556, 869, 1238, 1271
Hpy8I	GTNNAC	3 cut(s)	388, 1423, 1532
Hpy99I	CGWCG	2 cut(s)	293, 623
HpyAV	CCTTC	7 cut(s)	205, 520, 781, 853, 1099, 1377, 1456
HpyCH4III	ACNGT	4 cut(s)	392, 435, 1166, 1204
HpyCH4IV	ACGT	2 cut(s)	291, 747
HpyCH4V	TGCA	5 cut(s)	423, 582, 967, 1223, 1436
HpyF10VI	GCNNNNNNNGC	5 cut(s)	185, 281, 448, 559, 790
HpyF3I	CTNAG	4 cut(s)	71, 882, 903, 999
HpySE526I	ACGT	2 cut(s)	291, 747
Hsp92I	GRCGYC	2 cut(s)	246, 291
Hsp92II	CATG	6 cut(s)	412, 427, 559, 797, 967, 1307
HspAI	GCGC	5 cut(s)	246, 381, 440, 463, 1409
KasI	GGCGCC	1 cut(s)	245
Kpn2I	TCCGGA	2 cut(s)	1237, 1270
KspI	CCGCGG	1 cut(s)	446
Kzo9I	GATC	4 cut(s)	74, 322, 843, 1234
LmnI	GCTCC	2 cut(s)	264, 790
Lsp1109I	GCAGC	3 cut(s)	460, 613, 748
LweI	GCATC	2 cut(s)	7, 771
MaeI	CTAG	5 cut(s)	129, 471, 600, 713, 1293
MaeII	ACGT	2 cut(s)	291, 747
MaeIII	GTNAC	2 cut(s)	392, 1198
MalI	GATC	4 cut(s)	76, 324, 845, 1236
MboI	GATC	4 cut(s)	74, 322, 843, 1234
MboII	GAAGA	8 cut(s)	23, 286, 367, 424, 652, 718, 790, 1581
MflI	RGATCY	2 cut(s)	74, 1234
MhlI	GDGCHC	2 cut(s)	555, 944
MlsI	TGGCCA	1 cut(s)	284
MluCI	AATT	4 cut(s)	483, 891, 1262, 1357
MluNI	TGGCCA	1 cut(s)	284
Mly113I	GGCGCC	1 cut(s)	246
Mox20I	TGGCCA	1 cut(s)	284
MroI	TCCGGA	2 cut(s)	1237, 1270
MroXI	GAANNNNTTC	1 cut(s)	1557
MscI	TGGCCA	1 cut(s)	284
MseI	TTAA	4 cut(s)	149, 888, 909, 1503
MslI	CAYNNNNRTG	1 cut(s)	1308
Msp20I	TGGCCA	1 cut(s)	284
MspA1I	CMGCKG	1 cut(s)	445
MspI	CCGG	6 cut(s)	137, 329, 1136, 1238, 1271, 1521
MspR9I	CCNGG	5 cut(s)	185, 329, 1395, 1442, 1521
Mva1269I	GAATGC	1 cut(s)	261
MvaI	CCWGG	3 cut(s)	185, 1395, 1442
MvnI	CGCG	4 cut(s)	344, 440, 445, 463
MwoI	GCNNNNNNNGC	5 cut(s)	185, 281, 448, 559, 790
NarI	GGCGCC	1 cut(s)	246
NciI	CCSGG	2 cut(s)	329, 1521
NdeII	GATC	4 cut(s)	74, 322, 843, 1234
NlaIII	CATG	6 cut(s)	412, 427, 559, 797, 967, 1307
NlaIV	GGNNCC	3 cut(s)	247, 699, 1519
NmeAIII	GCCGAG	1 cut(s)	222
NmuCI	GTSAC	1 cut(s)	392
PagI	TCATGA	2 cut(s)	408, 555
PcsI	WCGNNNNNNNCGW	1 cut(s)	1065
PctI	GAATGC	1 cut(s)	261
PdmI	GAANNNNTTC	1 cut(s)	1557
PflMI	CCANNNNNTGG	1 cut(s)	969
PkrI	GCNGC	6 cut(s)	444, 447, 450, 628, 738, 1157
PluTI	GGCGCC	1 cut(s)	249
PpuMI	RGGWCCY	1 cut(s)	1517
PshAI	GACNNNNGTC	1 cut(s)	1329
PshBI	ATTAAT	1 cut(s)	149
Psp124BI	GAGCTC	1 cut(s)	555
Psp5II	RGGWCCY	1 cut(s)	1517
Psp6I	CCWGG	3 cut(s)	183, 1393, 1440
PspFI	CCCAGC	2 cut(s)	694, 819
PspGI	CCWGG	3 cut(s)	183, 1393, 1440
PspN4I	GGNNCC	3 cut(s)	247, 699, 1519
PspPI	GGNCC	4 cut(s)	139, 221, 698, 1517
PspPPI	RGGWCCY	1 cut(s)	1517
PsuI	RGATCY	2 cut(s)	74, 1234
RsaI	GTAC	4 cut(s)	389, 598, 1124, 1302
RsaNI	GTAC	4 cut(s)	388, 597, 1123, 1301
RseI	CAYNNNNRTG	1 cut(s)	1308
SacI	GAGCTC	1 cut(s)	555
SacII	CCGCGG	1 cut(s)	446
SaqAI	TTAA	4 cut(s)	149, 888, 909, 1503
SatI	GCNGC	6 cut(s)	443, 446, 449, 627, 737, 1156
Sau3AI	GATC	4 cut(s)	74, 322, 843, 1234
Sau96I	GGNCC	4 cut(s)	139, 221, 698, 1517
ScaI	AGTACT	1 cut(s)	598
ScrFI	CCNGG	5 cut(s)	185, 329, 1395, 1442, 1521
SduI	GDGCHC	2 cut(s)	555, 944
SfaNI	GCATC	2 cut(s)	7, 771
SfoI	GGCGCC	1 cut(s)	247
Sfr303I	CCGCGG	1 cut(s)	446
SgrBI	CCGCGG	1 cut(s)	446
SinI	GGWCC	1 cut(s)	1517
SmiMI	CAYNNNNRTG	1 cut(s)	1308
SmlI	CTYRAG	1 cut(s)	111
SmoI	CTYRAG	1 cut(s)	111
SpeI	ACTAGT	1 cut(s)	599
Sse9I	AATT	4 cut(s)	483, 891, 1262, 1357
SspDI	GGCGCC	1 cut(s)	245
SspMI	CTAG	5 cut(s)	129, 471, 600, 713, 1293
SstI	GAGCTC	1 cut(s)	555
StyD4I	CCNGG	5 cut(s)	183, 327, 1393, 1440, 1519
StyI	CCWWGG	2 cut(s)	672, 1192
TaaI	ACNGT	4 cut(s)	392, 435, 1166, 1204
TaiI	ACGT	2 cut(s)	294, 750
TaqI	TCGA	6 cut(s)	59, 253, 453, 510, 846, 1059
TasI	AATT	4 cut(s)	483, 891, 1262, 1357
TatI	WGTACW	2 cut(s)	596, 1300
TauI	GCSGC	3 cut(s)	445, 448, 1158
Tru1I	TTAA	4 cut(s)	149, 888, 909, 1503
Tru9I	TTAA	4 cut(s)	149, 888, 909, 1503
TseFI	GTSAC	1 cut(s)	392
TseI	GCWGC	3 cut(s)	448, 626, 736
Tsp45I	GTSAC	1 cut(s)	392
TspDTI	ATGAA	6 cut(s)	397, 425, 572, 810, 939, 1275
TspGWI	ACGGA	3 cut(s)	268, 375, 443
Van91I	CCANNNNNTGG	1 cut(s)	969
VpaK11BI	GGWCC	1 cut(s)	1517
VspI	ATTAAT	1 cut(s)	149
XapI	RAATTY	1 cut(s)	1262
XcmI	CCANNNNNNNNNTGG	1 cut(s)	583
XmnI	GAANNNNTTC	1 cut(s)	1557
XspI	CTAG	5 cut(s)	129, 471, 600, 713, 1293
ZraI	GACGTC	1 cut(s)	292
ZrmI	AGTACT	1 cut(s)	598

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.