Ribosomal protein-like protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Plant_tran | PF04827 | 206 - 312 | 7.7e-55 | Plant transposon protein |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 482 |
| AccIII | TCCGGA | 1 cut(s) | 291 |
| AciI | CCGC | 3 cut(s) | 414, 633, 836 |
| AclWI | GGATC | 2 cut(s) | 181, 725 |
| AcsI | RAATTY | 1 cut(s) | 1013 |
| AcuI | CTGAAG | 2 cut(s) | 45, 636 |
| AcvI | CACGTG | 1 cut(s) | 737 |
| AfaI | GTAC | 3 cut(s) | 434, 441, 622 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 617 |
| AgsI | TTSAA | 5 cut(s) | 502, 719, 947, 971, 1010 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 286, 318 |
| AluBI | AGCT | 4 cut(s) | 488, 614, 683, 776 |
| AluI | AGCT | 4 cut(s) | 488, 614, 683, 776 |
| Alw26I | GTCTC | 1 cut(s) | 263 |
| AlwI | GGATC | 2 cut(s) | 181, 725 |
| Ama87I | CYCGRG | 1 cut(s) | 600 |
| Aor13HI | TCCGGA | 1 cut(s) | 291 |
| AoxI | GGCC | 1 cut(s) | 839 |
| ApoI | RAATTY | 1 cut(s) | 1013 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 335, 367 |
| AspS9I | GGNCC | 3 cut(s) | 705, 740, 839 |
| AsuHPI | GGTGA | 2 cut(s) | 546, 1001 |
| AsuII | TTCGAA | 1 cut(s) | 421 |
| AvaI | CYCGRG | 1 cut(s) | 600 |
| AvaII | GGWCC | 2 cut(s) | 705, 740 |
| BbrPI | CACGTG | 1 cut(s) | 737 |
| BbsI | GAAGAC | 1 cut(s) | 30 |
| BccI | CCATC | 3 cut(s) | 362, 680, 850 |
| BclI | TGATCA | 1 cut(s) | 909 |
| BcoDI | GTCTC | 1 cut(s) | 263 |
| BfaI | CTAG | 3 cut(s) | 491, 636, 680 |
| BfmI | CTRYAG | 1 cut(s) | 483 |
| BisI | GCNGC | 1 cut(s) | 414 |
| BlsI | GCNGC | 1 cut(s) | 415 |
| Bme18I | GGWCC | 2 cut(s) | 705, 740 |
| BmeT110I | CYCGRG | 1 cut(s) | 600 |
| BmgT120I | GGNCC | 3 cut(s) | 705, 740, 839 |
| BmiI | GGNNCC | 2 cut(s) | 742, 840 |
| BmsI | GCATC | 2 cut(s) | 316, 925 |
| BpiI | GAAGAC | 1 cut(s) | 30 |
| Bpu14I | TTCGAA | 1 cut(s) | 421 |
| BsaAI | YACGTR | 1 cut(s) | 737 |
| BsaWI | WCCGGW | 1 cut(s) | 291 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 617 |
| BseAI | TCCGGA | 1 cut(s) | 291 |
| BseGI | GGATG | 1 cut(s) | 300 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 617 |
| BseMII | CTCAG | 2 cut(s) | 168, 258 |
| BshFI | GGCC | 1 cut(s) | 841 |
| BsiHKCI | CYCGRG | 1 cut(s) | 600 |
| BsiSI | CCGG | 1 cut(s) | 292 |
| BsiWI | CGTACG | 1 cut(s) | 432 |
| BslFI | GGGAC | 1 cut(s) | 726 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 617 |
| BsmAI | GTCTC | 1 cut(s) | 263 |
| BsmFI | GGGAC | 1 cut(s) | 726 |
| BsmI | GAATGC | 1 cut(s) | 800 |
| BsnI | GGCC | 1 cut(s) | 841 |
| BsoBI | CYCGRG | 1 cut(s) | 600 |
| Bsp119I | TTCGAA | 1 cut(s) | 421 |
| Bsp13I | TCCGGA | 1 cut(s) | 291 |
| Bsp143I | GATC | 5 cut(s) | 173, 205, 551, 730, 909 |
| BspACI | CCGC | 3 cut(s) | 414, 633, 836 |
| BspANI | GGCC | 1 cut(s) | 841 |
| BspCNI | CTCAG | 2 cut(s) | 167, 259 |
| BspEI | TCCGGA | 1 cut(s) | 291 |
| BspHI | TCATGA | 1 cut(s) | 727 |
| BspLI | GGNNCC | 2 cut(s) | 742, 840 |
| BspPI | GGATC | 2 cut(s) | 181, 725 |
| BspT104I | TTCGAA | 1 cut(s) | 421 |
| BssMI | GATC | 5 cut(s) | 173, 205, 551, 730, 909 |
| Bst4CI | ACNGT | 3 cut(s) | 17, 437, 865 |
| Bst6I | CTCTTC | 1 cut(s) | 358 |
| BstBAI | YACGTR | 1 cut(s) | 737 |
| BstBI | TTCGAA | 1 cut(s) | 421 |
| BstC8I | GCNNGC | 2 cut(s) | 223, 577 |
| BstDEI | CTNAG | 2 cut(s) | 154, 267 |
| BstF5I | GGATG | 1 cut(s) | 300 |
| BstKTI | GATC | 5 cut(s) | 176, 208, 554, 733, 912 |
| BstMAI | GTCTC | 1 cut(s) | 263 |
| BstMBI | GATC | 5 cut(s) | 173, 205, 551, 730, 909 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 632, 833 |
| BstNSI | RCATGY | 1 cut(s) | 540 |
| BstSFI | CTRYAG | 1 cut(s) | 483 |
| BstV2I | GAAGAC | 1 cut(s) | 30 |
| BstX2I | RGATCY | 1 cut(s) | 173 |
| BstYI | RGATCY | 1 cut(s) | 173 |
| BsuRI | GGCC | 1 cut(s) | 841 |
| BtsCI | GGATG | 1 cut(s) | 300 |
| BtsIMutI | CAGTG | 1 cut(s) | 1027 |
| Cac8I | GCNNGC | 2 cut(s) | 223, 577 |
| CciI | TCATGA | 1 cut(s) | 727 |
| Cfr13I | GGNCC | 3 cut(s) | 705, 740, 839 |
| CseI | GACGC | 1 cut(s) | 569 |
| Csp6I | GTAC | 3 cut(s) | 433, 440, 621 |
| CviAII | CATG | 8 cut(s) | 167, 182, 188, 341, 537, 728, 763, 872 |
| CviJI | RGCY | 7 cut(s) | 387, 488, 614, 683, 776, 841, 1022 |
| CviKI_1 | RGCY | 7 cut(s) | 387, 488, 614, 683, 776, 841, 1022 |
| CviQI | GTAC | 3 cut(s) | 433, 440, 621 |
| DdeI | CTNAG | 2 cut(s) | 154, 267 |
| DpnI | GATC | 5 cut(s) | 175, 207, 553, 732, 911 |
| DpnII | GATC | 5 cut(s) | 173, 205, 551, 730, 909 |
| Eam1104I | CTCTTC | 1 cut(s) | 358 |
| EarI | CTCTTC | 1 cut(s) | 358 |
| Eco47I | GGWCC | 2 cut(s) | 705, 740 |
| Eco57I | CTGAAG | 2 cut(s) | 45, 636 |
| Eco72I | CACGTG | 1 cut(s) | 737 |
| Eco88I | CYCGRG | 1 cut(s) | 600 |
| EcoT22I | ATGCAT | 1 cut(s) | 903 |
| FaeI | CATG | 8 cut(s) | 170, 185, 191, 344, 540, 731, 766, 875 |
| FaqI | GGGAC | 1 cut(s) | 726 |
| FatI | CATG | 8 cut(s) | 166, 181, 187, 340, 536, 727, 762, 871 |
| FauI | CCCGC | 2 cut(s) | 640, 829 |
| FbaI | TGATCA | 1 cut(s) | 909 |
| FblI | GTMKAC | 1 cut(s) | 482 |
| Fnu4HI | GCNGC | 1 cut(s) | 414 |
| FokI | GGATG | 1 cut(s) | 307 |
| Fsp4HI | GCNGC | 1 cut(s) | 414 |
| FspBI | CTAG | 3 cut(s) | 491, 636, 680 |
| GluI | GCNGC | 1 cut(s) | 414 |
| HaeIII | GGCC | 1 cut(s) | 841 |
| HapII | CCGG | 1 cut(s) | 292 |
| HgaI | GACGC | 1 cut(s) | 569 |
| Hin1II | CATG | 8 cut(s) | 170, 185, 191, 344, 540, 731, 766, 875 |
| HindIII | AAGCTT | 1 cut(s) | 774 |
| HinfI | GANTC | 6 cut(s) | 288, 298, 372, 449, 479, 596 |
| HpaII | CCGG | 1 cut(s) | 292 |
| HphI | GGTGA | 2 cut(s) | 546, 1001 |
| Hpy166II | GTNNAC | 4 cut(s) | 380, 440, 483, 708 |
| Hpy188I | TCNGA | 3 cut(s) | 64, 157, 806 |
| Hpy188III | TCNNGA | 8 cut(s) | 203, 209, 266, 292, 491, 600, 728, 1010 |
| Hpy8I | GTNNAC | 4 cut(s) | 380, 440, 483, 708 |
| Hpy99I | CGWCG | 1 cut(s) | 285 |
| HpyAV | CCTTC | 2 cut(s) | 152, 611 |
| HpyCH4III | ACNGT | 3 cut(s) | 17, 437, 865 |
| HpyCH4IV | ACGT | 2 cut(s) | 736, 796 |
| HpyCH4V | TGCA | 9 cut(s) | 248, 400, 536, 575, 800, 814, 827, 901, 938 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 632, 833 |
| HpyF3I | CTNAG | 2 cut(s) | 154, 267 |
| HpySE526I | ACGT | 2 cut(s) | 736, 796 |
| Hsp92II | CATG | 8 cut(s) | 170, 185, 191, 344, 540, 731, 766, 875 |
| Kpn2I | TCCGGA | 1 cut(s) | 291 |
| Ksp22I | TGATCA | 1 cut(s) | 909 |
| Kzo9I | GATC | 5 cut(s) | 173, 205, 551, 730, 909 |
| LmnI | GCTCC | 1 cut(s) | 631 |
| LpnPI | CCDG | 7 cut(s) | 270, 279, 305, 378, 456, 570, 624 |
| LweI | GCATC | 2 cut(s) | 316, 925 |
| MaeI | CTAG | 3 cut(s) | 491, 636, 680 |
| MaeII | ACGT | 2 cut(s) | 736, 796 |
| MalI | GATC | 5 cut(s) | 175, 207, 553, 732, 911 |
| MboI | GATC | 5 cut(s) | 173, 205, 551, 730, 909 |
| MfeI | CAATTG | 2 cut(s) | 942, 966 |
| MflI | RGATCY | 1 cut(s) | 173 |
| MluCI | AATT | 9 cut(s) | 70, 108, 124, 346, 723, 752, 942, 966, 1013 |
| MlyI | GAGTC | 3 cut(s) | 307, 381, 488 |
| MnlI | CCTC | 3 cut(s) | 520, 596, 813 |
| Mph1103I | ATGCAT | 1 cut(s) | 903 |
| MroI | TCCGGA | 1 cut(s) | 291 |
| MseI | TTAA | 1 cut(s) | 9 |
| MslI | CAYNNNNRTG | 2 cut(s) | 186, 850 |
| MspA1I | CMGCKG | 1 cut(s) | 614 |
| MspI | CCGG | 1 cut(s) | 292 |
| MunI | CAATTG | 2 cut(s) | 942, 966 |
| Mva1269I | GAATGC | 1 cut(s) | 800 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 632, 833 |
| NdeII | GATC | 5 cut(s) | 173, 205, 551, 730, 909 |
| NlaIII | CATG | 8 cut(s) | 170, 185, 191, 344, 540, 731, 766, 875 |
| NlaIV | GGNNCC | 2 cut(s) | 742, 840 |
| NsiI | ATGCAT | 1 cut(s) | 903 |
| NspI | RCATGY | 1 cut(s) | 540 |
| NspV | TTCGAA | 1 cut(s) | 421 |
| PaeR7I | CTCGAG | 1 cut(s) | 600 |
| PagI | TCATGA | 1 cut(s) | 727 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 511 |
| PctI | GAATGC | 1 cut(s) | 800 |
| PfeI | GAWTC | 3 cut(s) | 288, 449, 596 |
| Pfl23II | CGTACG | 1 cut(s) | 432 |
| PkrI | GCNGC | 1 cut(s) | 415 |
| PleI | GAGTC | 3 cut(s) | 306, 380, 487 |
| PmaCI | CACGTG | 1 cut(s) | 737 |
| PmlI | CACGTG | 1 cut(s) | 737 |
| PpsI | GAGTC | 3 cut(s) | 306, 380, 487 |
| Ppu21I | YACGTR | 1 cut(s) | 737 |
| PspCI | CACGTG | 1 cut(s) | 737 |
| PspLI | CGTACG | 1 cut(s) | 432 |
| PspN4I | GGNNCC | 2 cut(s) | 742, 840 |
| PspPI | GGNCC | 3 cut(s) | 705, 740, 839 |
| PsuI | RGATCY | 1 cut(s) | 173 |
| PvuII | CAGCTG | 1 cut(s) | 614 |
| RsaI | GTAC | 3 cut(s) | 434, 441, 622 |
| RsaNI | GTAC | 3 cut(s) | 433, 440, 621 |
| RseI | CAYNNNNRTG | 2 cut(s) | 186, 850 |
| SaqAI | TTAA | 1 cut(s) | 9 |
| SatI | GCNGC | 1 cut(s) | 414 |
| Sau3AI | GATC | 5 cut(s) | 173, 205, 551, 730, 909 |
| Sau96I | GGNCC | 3 cut(s) | 705, 740, 839 |
| SchI | GAGTC | 3 cut(s) | 307, 381, 488 |
| SfaNI | GCATC | 2 cut(s) | 316, 925 |
| SfcI | CTRYAG | 1 cut(s) | 483 |
| Sfr274I | CTCGAG | 1 cut(s) | 600 |
| SfuI | TTCGAA | 1 cut(s) | 421 |
| SinI | GGWCC | 2 cut(s) | 705, 740 |
| SlaI | CTCGAG | 1 cut(s) | 600 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 186, 850 |
| SmlI | CTYRAG | 1 cut(s) | 600 |
| SmoI | CTYRAG | 1 cut(s) | 600 |
| Sse9I | AATT | 9 cut(s) | 70, 108, 124, 346, 723, 752, 942, 966, 1013 |
| SsiI | CCGC | 3 cut(s) | 414, 633, 836 |
| SspMI | CTAG | 3 cut(s) | 491, 636, 680 |
| TaaI | ACNGT | 3 cut(s) | 17, 437, 865 |
| TaiI | ACGT | 2 cut(s) | 739, 799 |
| TaqI | TCGA | 9 cut(s) | 208, 280, 421, 550, 601, 915, 957, 1003, 1024 |
| TasI | AATT | 9 cut(s) | 70, 108, 124, 346, 723, 752, 942, 966, 1013 |
| TauI | GCSGC | 1 cut(s) | 416 |
| TfiI | GAWTC | 3 cut(s) | 288, 449, 596 |
| Tru1I | TTAA | 1 cut(s) | 9 |
| Tru9I | TTAA | 1 cut(s) | 9 |
| TspDTI | ATGAA | 4 cut(s) | 170, 223, 716, 779 |
| TspGWI | ACGGA | 1 cut(s) | 24 |
| VpaK11BI | GGWCC | 2 cut(s) | 705, 740 |
| XapI | RAATTY | 1 cut(s) | 1013 |
| XbaI | TCTAGA | 1 cut(s) | 490 |
| XceI | RCATGY | 1 cut(s) | 540 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 365, 849 |
| XhoI | CTCGAG | 1 cut(s) | 600 |
| XmiI | GTMKAC | 1 cut(s) | 482 |
| XspI | CTAG | 3 cut(s) | 491, 636, 680 |
| Zsp2I | ATGCAT | 1 cut(s) | 903 |