Ribosomal protein-like protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Plant_tran | PF04827 | 192 - 234 | 4.4e-16 | Plant transposon protein |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 319 |
| AccIII | TCCGGA | 1 cut(s) | 221 |
| AciI | CCGC | 6 cut(s) | 194, 454, 546, 570, 583, 626 |
| AcsI | RAATTY | 1 cut(s) | 35 |
| AcyI | GRCGYC | 1 cut(s) | 316 |
| AfaI | GTAC | 2 cut(s) | 308, 578 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 193, 537 |
| AgsI | TTSAA | 4 cut(s) | 40, 85, 346, 619 |
| AjiI | CACGTC | 1 cut(s) | 681 |
| AjnI | CCWGG | 2 cut(s) | 90, 643 |
| AluBI | AGCT | 1 cut(s) | 191 |
| AluI | AGCT | 1 cut(s) | 191 |
| Aor13HI | TCCGGA | 1 cut(s) | 221 |
| AoxI | GGCC | 1 cut(s) | 209 |
| ApeKI | GCWGC | 2 cut(s) | 191, 446 |
| ApoI | RAATTY | 1 cut(s) | 35 |
| AspS9I | GGNCC | 1 cut(s) | 210 |
| AsuHPI | GGTGA | 1 cut(s) | 80 |
| BbvI | GCAGC | 2 cut(s) | 178, 433 |
| BccI | CCATC | 1 cut(s) | 499 |
| BceAI | ACGGC | 1 cut(s) | 201 |
| BciT130I | CCWGG | 2 cut(s) | 92, 645 |
| BfmI | CTRYAG | 3 cut(s) | 205, 414, 477 |
| BglII | AGATCT | 1 cut(s) | 201 |
| BisI | GCNGC | 3 cut(s) | 192, 195, 447 |
| BlsI | GCNGC | 3 cut(s) | 193, 196, 448 |
| Bme1390I | CCNGG | 2 cut(s) | 92, 645 |
| BmgBI | CACGTC | 1 cut(s) | 681 |
| BmgT120I | GGNCC | 1 cut(s) | 210 |
| BmrFI | CCNGG | 2 cut(s) | 92, 645 |
| BmsI | GCATC | 4 cut(s) | 391, 447, 482, 621 |
| Bpu10I | CCTNAGC | 1 cut(s) | 429 |
| BpuEI | CTTGAG | 2 cut(s) | 4, 545 |
| BsaAI | YACGTR | 1 cut(s) | 306 |
| BsaHI | GRCGYC | 1 cut(s) | 316 |
| BsaJI | CCNNGG | 2 cut(s) | 91, 644 |
| BsaWI | WCCGGW | 1 cut(s) | 221 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 599, 629 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 193, 537 |
| Bse1I | ACTGG | 1 cut(s) | 680 |
| BseAI | TCCGGA | 1 cut(s) | 221 |
| BseBI | CCWGG | 2 cut(s) | 92, 645 |
| BseDI | CCNNGG | 2 cut(s) | 91, 644 |
| BseGI | GGATG | 8 cut(s) | 30, 124, 183, 274, 462, 496, 510, 654 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 193, 537 |
| BseMII | CTCAG | 3 cut(s) | 212, 420, 564 |
| BseNI | ACTGG | 1 cut(s) | 680 |
| BseRI | GAGGAG | 1 cut(s) | 137 |
| BseXI | GCAGC | 2 cut(s) | 178, 433 |
| BseYI | CCCAGC | 1 cut(s) | 212 |
| BshFI | GGCC | 1 cut(s) | 211 |
| BsiSI | CCGG | 1 cut(s) | 222 |
| BslFI | GGGAC | 1 cut(s) | 514 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 193, 537 |
| BsmFI | GGGAC | 1 cut(s) | 514 |
| BsmI | GAATGC | 1 cut(s) | 293 |
| BsnI | GGCC | 1 cut(s) | 211 |
| Bsp13I | TCCGGA | 1 cut(s) | 221 |
| Bsp143I | GATC | 2 cut(s) | 201, 481 |
| BspACI | CCGC | 6 cut(s) | 194, 454, 546, 570, 583, 626 |
| BspANI | GGCC | 1 cut(s) | 211 |
| BspCNI | CTCAG | 3 cut(s) | 211, 421, 565 |
| BspEI | TCCGGA | 1 cut(s) | 221 |
| BspHI | TCATGA | 1 cut(s) | 354 |
| BspMAI | CTGCAG | 2 cut(s) | 209, 481 |
| BsrI | ACTGG | 1 cut(s) | 680 |
| BssECI | CCNNGG | 2 cut(s) | 91, 644 |
| BssMI | GATC | 2 cut(s) | 201, 481 |
| BssNI | GRCGYC | 1 cut(s) | 316 |
| Bst2UI | CCWGG | 2 cut(s) | 92, 645 |
| Bst4CI | ACNGT | 2 cut(s) | 615, 692 |
| Bst6I | CTCTTC | 2 cut(s) | 42, 108 |
| BstACI | GRCGYC | 1 cut(s) | 316 |
| BstBAI | YACGTR | 1 cut(s) | 306 |
| BstC8I | GCNNGC | 3 cut(s) | 209, 242, 462 |
| BstDEI | CTNAG | 3 cut(s) | 198, 429, 573 |
| BstF5I | GGATG | 8 cut(s) | 30, 124, 183, 274, 462, 496, 510, 654 |
| BstKTI | GATC | 2 cut(s) | 204, 484 |
| BstMBI | GATC | 2 cut(s) | 201, 481 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 213, 410, 470 |
| BstNI | CCWGG | 2 cut(s) | 92, 645 |
| BstSCI | CCNGG | 2 cut(s) | 90, 643 |
| BstSFI | CTRYAG | 3 cut(s) | 205, 414, 477 |
| BstSNI | TACGTA | 1 cut(s) | 306 |
| BstV1I | GCAGC | 2 cut(s) | 178, 433 |
| BstX2I | RGATCY | 1 cut(s) | 201 |
| BstYI | RGATCY | 1 cut(s) | 201 |
| BsuRI | GGCC | 1 cut(s) | 211 |
| BtrI | CACGTC | 1 cut(s) | 681 |
| BtsCI | GGATG | 8 cut(s) | 30, 124, 183, 274, 462, 496, 510, 654 |
| BtsIMutI | CAGTG | 1 cut(s) | 673 |
| Cac8I | GCNNGC | 3 cut(s) | 209, 242, 462 |
| CciI | TCATGA | 1 cut(s) | 354 |
| Cfr13I | GGNCC | 1 cut(s) | 210 |
| CseI | GACGC | 1 cut(s) | 116 |
| Csp6I | GTAC | 2 cut(s) | 307, 577 |
| CviAII | CATG | 4 cut(s) | 355, 374, 598, 702 |
| CviJI | RGCY | 6 cut(s) | 164, 191, 197, 211, 216, 639 |
| CviKI_1 | RGCY | 6 cut(s) | 164, 191, 197, 211, 216, 639 |
| CviQI | GTAC | 2 cut(s) | 307, 577 |
| DdeI | CTNAG | 3 cut(s) | 198, 429, 573 |
| DpnI | GATC | 2 cut(s) | 203, 483 |
| DpnII | GATC | 2 cut(s) | 201, 481 |
| Eam1104I | CTCTTC | 2 cut(s) | 42, 108 |
| EarI | CTCTTC | 2 cut(s) | 42, 108 |
| EciI | GGCGGA | 1 cut(s) | 641 |
| Eco105I | TACGTA | 1 cut(s) | 306 |
| EcoRI | GAATTC | 1 cut(s) | 35 |
| EcoRII | CCWGG | 2 cut(s) | 90, 643 |
| FaeI | CATG | 4 cut(s) | 358, 377, 601, 705 |
| FaiI | YATR | 9 cut(s) | 257, 356, 375, 416, 466, 468, 599, 671, 703 |
| FaqI | GGGAC | 1 cut(s) | 514 |
| FatI | CATG | 4 cut(s) | 354, 373, 597, 701 |
| FauNDI | CATATG | 1 cut(s) | 466 |
| Fnu4HI | GCNGC | 3 cut(s) | 192, 195, 447 |
| FokI | GGATG | 8 cut(s) | 37, 131, 170, 281, 469, 503, 517, 661 |
| Fsp4HI | GCNGC | 3 cut(s) | 192, 195, 447 |
| GluI | GCNGC | 3 cut(s) | 192, 195, 447 |
| GsaI | CCCAGC | 1 cut(s) | 216 |
| HaeIII | GGCC | 1 cut(s) | 211 |
| HapII | CCGG | 1 cut(s) | 222 |
| HgaI | GACGC | 1 cut(s) | 116 |
| Hin1I | GRCGYC | 1 cut(s) | 316 |
| Hin1II | CATG | 4 cut(s) | 358, 377, 601, 705 |
| HinfI | GANTC | 5 cut(s) | 68, 180, 377, 527, 557 |
| HpaII | CCGG | 1 cut(s) | 222 |
| HphI | GGTGA | 1 cut(s) | 80 |
| Hpy166II | GTNNAC | 1 cut(s) | 422 |
| Hpy188I | TCNGA | 2 cut(s) | 73, 201 |
| Hpy188III | TCNNGA | 4 cut(s) | 44, 222, 355, 524 |
| Hpy8I | GTNNAC | 1 cut(s) | 422 |
| Hpy99I | CGWCG | 3 cut(s) | 180, 252, 321 |
| HpyAV | CCTTC | 2 cut(s) | 147, 616 |
| HpyCH4III | ACNGT | 2 cut(s) | 615, 692 |
| HpyCH4IV | ACGT | 3 cut(s) | 305, 316, 680 |
| HpyCH4V | TGCA | 8 cut(s) | 207, 293, 369, 391, 464, 479, 673, 701 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 213, 410, 470 |
| HpyF3I | CTNAG | 3 cut(s) | 198, 429, 573 |
| HpySE526I | ACGT | 3 cut(s) | 305, 316, 680 |
| Hsp92I | GRCGYC | 1 cut(s) | 316 |
| Hsp92II | CATG | 4 cut(s) | 358, 377, 601, 705 |
| Kpn2I | TCCGGA | 1 cut(s) | 221 |
| Kzo9I | GATC | 2 cut(s) | 201, 481 |
| LmnI | GCTCC | 4 cut(s) | 124, 470, 548, 607 |
| Lsp1109I | GCAGC | 2 cut(s) | 178, 433 |
| LweI | GCATC | 4 cut(s) | 391, 447, 482, 621 |
| MaeII | ACGT | 3 cut(s) | 305, 316, 680 |
| MalI | GATC | 2 cut(s) | 203, 483 |
| MboI | GATC | 2 cut(s) | 201, 481 |
| MboII | GAAGA | 7 cut(s) | 3, 6, 59, 65, 73, 125, 631 |
| MflI | RGATCY | 1 cut(s) | 201 |
| MluCI | AATT | 3 cut(s) | 35, 56, 438 |
| MlyI | GAGTC | 2 cut(s) | 189, 536 |
| MroI | TCCGGA | 1 cut(s) | 221 |
| MseI | TTAA | 1 cut(s) | 63 |
| MspA1I | CMGCKG | 1 cut(s) | 572 |
| MspI | CCGG | 1 cut(s) | 222 |
| MspR9I | CCNGG | 2 cut(s) | 92, 645 |
| Mva1269I | GAATGC | 1 cut(s) | 293 |
| MvaI | CCWGG | 2 cut(s) | 92, 645 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 213, 410, 470 |
| NdeI | CATATG | 1 cut(s) | 466 |
| NdeII | GATC | 2 cut(s) | 201, 481 |
| NlaIII | CATG | 4 cut(s) | 358, 377, 601, 705 |
| PagI | TCATGA | 1 cut(s) | 354 |
| PctI | GAATGC | 1 cut(s) | 293 |
| PfeI | GAWTC | 3 cut(s) | 68, 377, 557 |
| PkrI | GCNGC | 3 cut(s) | 193, 196, 448 |
| PleI | GAGTC | 2 cut(s) | 188, 535 |
| PpsI | GAGTC | 2 cut(s) | 188, 535 |
| Ppu21I | YACGTR | 1 cut(s) | 306 |
| Psp6I | CCWGG | 2 cut(s) | 90, 643 |
| PspFI | CCCAGC | 1 cut(s) | 212 |
| PspGI | CCWGG | 2 cut(s) | 90, 643 |
| PspPI | GGNCC | 1 cut(s) | 210 |
| PstI | CTGCAG | 2 cut(s) | 209, 481 |
| PsuI | RGATCY | 1 cut(s) | 201 |
| RsaI | GTAC | 2 cut(s) | 308, 578 |
| RsaNI | GTAC | 2 cut(s) | 307, 577 |
| SaqAI | TTAA | 1 cut(s) | 63 |
| SatI | GCNGC | 3 cut(s) | 192, 195, 447 |
| Sau3AI | GATC | 2 cut(s) | 201, 481 |
| Sau96I | GGNCC | 1 cut(s) | 210 |
| SchI | GAGTC | 2 cut(s) | 189, 536 |
| ScrFI | CCNGG | 2 cut(s) | 92, 645 |
| SfaNI | GCATC | 4 cut(s) | 391, 447, 482, 621 |
| SfcI | CTRYAG | 3 cut(s) | 205, 414, 477 |
| SmlI | CTYRAG | 2 cut(s) | 19, 524 |
| SmoI | CTYRAG | 2 cut(s) | 19, 524 |
| SnaBI | TACGTA | 1 cut(s) | 306 |
| Sse9I | AATT | 3 cut(s) | 35, 56, 438 |
| SsiI | CCGC | 6 cut(s) | 194, 454, 546, 570, 583, 626 |
| StyD4I | CCNGG | 2 cut(s) | 90, 643 |
| TaaI | ACNGT | 2 cut(s) | 615, 692 |
| TaiI | ACGT | 3 cut(s) | 308, 319, 683 |
| TaqI | TCGA | 2 cut(s) | 178, 555 |
| TasI | AATT | 3 cut(s) | 35, 56, 438 |
| TauI | GCSGC | 1 cut(s) | 197 |
| TfiI | GAWTC | 3 cut(s) | 68, 377, 557 |
| Tru1I | TTAA | 1 cut(s) | 63 |
| Tru9I | TTAA | 1 cut(s) | 63 |
| TscAI | CASTG | 1 cut(s) | 680 |
| TseI | GCWGC | 2 cut(s) | 191, 446 |
| TspRI | CASTG | 1 cut(s) | 680 |
| XapI | RAATTY | 1 cut(s) | 35 |
| ZraI | GACGTC | 1 cut(s) | 317 |