Plant transposon protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 152 |
| AciI | CCGC | 2 cut(s) | 189, 649 |
| AclWI | GGATC | 2 cut(s) | 202, 599 |
| AcuI | CTGAAG | 1 cut(s) | 674 |
| AfaI | GTAC | 1 cut(s) | 248 |
| AgeI | ACCGGT | 1 cut(s) | 590 |
| AgsI | TTSAA | 3 cut(s) | 114, 292, 707 |
| AjnI | CCWGG | 1 cut(s) | 560 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 360, 392 |
| AluBI | AGCT | 1 cut(s) | 184 |
| AluI | AGCT | 1 cut(s) | 184 |
| Alw21I | GWGCWC | 3 cut(s) | 202, 421, 675 |
| Alw26I | GTCTC | 2 cut(s) | 345, 591 |
| AlwI | GGATC | 2 cut(s) | 202, 599 |
| AoxI | GGCC | 1 cut(s) | 557 |
| AsiGI | ACCGGT | 1 cut(s) | 590 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 638 |
| AspLEI | GCGC | 1 cut(s) | 73 |
| AspS9I | GGNCC | 4 cut(s) | 439, 558, 584, 646 |
| AsuHPI | GGTGA | 1 cut(s) | 617 |
| AvaII | GGWCC | 3 cut(s) | 439, 584, 646 |
| BauI | CACGAG | 1 cut(s) | 420 |
| BbsI | GAAGAC | 1 cut(s) | 702 |
| Bbv12I | GWGCWC | 3 cut(s) | 202, 421, 675 |
| BbvCI | CCTCAGC | 1 cut(s) | 570 |
| BccI | CCATC | 2 cut(s) | 122, 270 |
| BceAI | ACGGC | 1 cut(s) | 79 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 50, 84 |
| BciT130I | CCWGG | 1 cut(s) | 562 |
| BcoDI | GTCTC | 2 cut(s) | 345, 591 |
| BfaI | CTAG | 1 cut(s) | 36 |
| Bme1390I | CCNGG | 1 cut(s) | 562 |
| Bme18I | GGWCC | 3 cut(s) | 439, 584, 646 |
| BmgT120I | GGNCC | 4 cut(s) | 439, 558, 584, 646 |
| BmiI | GGNNCC | 1 cut(s) | 585 |
| BmrFI | CCNGG | 1 cut(s) | 562 |
| BmsI | GCATC | 1 cut(s) | 610 |
| BpiI | GAAGAC | 1 cut(s) | 702 |
| Bpu10I | CCTNAGC | 1 cut(s) | 570 |
| BpuEI | CTTGAG | 1 cut(s) | 327 |
| BsaBI | GATNNNNATC | 1 cut(s) | 114 |
| BsaJI | CCNNGG | 2 cut(s) | 318, 560 |
| BsaWI | WCCGGW | 1 cut(s) | 590 |
| Bse118I | RCCGGY | 1 cut(s) | 590 |
| Bse8I | GATNNNNATC | 1 cut(s) | 114 |
| BseBI | CCWGG | 1 cut(s) | 562 |
| BseDI | CCNNGG | 2 cut(s) | 318, 560 |
| BseGI | GGATG | 4 cut(s) | 94, 96, 367, 499 |
| BseJI | GATNNNNATC | 1 cut(s) | 114 |
| BseMII | CTCAG | 1 cut(s) | 561 |
| BseRI | GAGGAG | 2 cut(s) | 92, 426 |
| BshFI | GGCC | 1 cut(s) | 559 |
| BshTI | ACCGGT | 1 cut(s) | 590 |
| BsiHKAI | GWGCWC | 3 cut(s) | 202, 421, 675 |
| BsiSI | CCGG | 1 cut(s) | 591 |
| BslFI | GGGAC | 2 cut(s) | 277, 597 |
| BsmAI | GTCTC | 2 cut(s) | 345, 591 |
| BsmFI | GGGAC | 2 cut(s) | 277, 597 |
| BsnI | GGCC | 1 cut(s) | 559 |
| Bsp1286I | GDGCHC | 3 cut(s) | 202, 421, 675 |
| Bsp143I | GATC | 3 cut(s) | 78, 207, 604 |
| BspACI | CCGC | 2 cut(s) | 189, 649 |
| BspANI | GGCC | 1 cut(s) | 559 |
| BspCNI | CTCAG | 1 cut(s) | 562 |
| BspLI | GGNNCC | 1 cut(s) | 585 |
| BspPI | GGATC | 2 cut(s) | 202, 599 |
| BsrFI | RCCGGY | 1 cut(s) | 590 |
| BssAI | RCCGGY | 1 cut(s) | 590 |
| BssECI | CCNNGG | 2 cut(s) | 318, 560 |
| BssMI | GATC | 3 cut(s) | 78, 207, 604 |
| BssSI | CACGAG | 1 cut(s) | 420 |
| BssT1I | CCWWGG | 1 cut(s) | 318 |
| Bst2BI | CACGAG | 1 cut(s) | 420 |
| Bst2UI | CCWGG | 1 cut(s) | 562 |
| Bst4CI | ACNGT | 3 cut(s) | 239, 396, 677 |
| Bst6I | CTCTTC | 1 cut(s) | 534 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 138 |
| BstC8I | GCNNGC | 1 cut(s) | 139 |
| BstDEI | CTNAG | 1 cut(s) | 570 |
| BstF5I | GGATG | 4 cut(s) | 94, 96, 367, 499 |
| BstHHI | GCGC | 1 cut(s) | 73 |
| BstKTI | GATC | 3 cut(s) | 81, 210, 607 |
| BstMAI | GTCTC | 2 cut(s) | 345, 591 |
| BstMBI | GATC | 3 cut(s) | 78, 207, 604 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 138, 197 |
| BstNI | CCWGG | 1 cut(s) | 562 |
| BstNSI | RCATGY | 1 cut(s) | 141 |
| BstSCI | CCNGG | 1 cut(s) | 560 |
| BstV2I | GAAGAC | 1 cut(s) | 702 |
| BsuRI | GGCC | 1 cut(s) | 559 |
| BtgZI | GCGATG | 2 cut(s) | 141, 528 |
| BtsCI | GGATG | 4 cut(s) | 94, 96, 367, 499 |
| Cac8I | GCNNGC | 1 cut(s) | 139 |
| CfoI | GCGC | 1 cut(s) | 73 |
| Cfr10I | RCCGGY | 1 cut(s) | 590 |
| Cfr13I | GGNCC | 4 cut(s) | 439, 558, 584, 646 |
| CseI | GACGC | 1 cut(s) | 32 |
| Csp6I | GTAC | 1 cut(s) | 247 |
| CspAI | ACCGGT | 1 cut(s) | 590 |
| CviAII | CATG | 4 cut(s) | 138, 454, 481, 643 |
| CviJI | RGCY | 2 cut(s) | 184, 559 |
| CviKI_1 | RGCY | 2 cut(s) | 184, 559 |
| CviQI | GTAC | 1 cut(s) | 247 |
| DdeI | CTNAG | 1 cut(s) | 570 |
| DpnI | GATC | 3 cut(s) | 80, 209, 606 |
| DpnII | GATC | 3 cut(s) | 78, 207, 604 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 152 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 152 |
| Eam1104I | CTCTTC | 1 cut(s) | 534 |
| EarI | CTCTTC | 1 cut(s) | 534 |
| Eco130I | CCWWGG | 1 cut(s) | 318 |
| Eco47I | GGWCC | 3 cut(s) | 439, 584, 646 |
| Eco57I | CTGAAG | 1 cut(s) | 674 |
| EcoO109I | RGGNCCY | 1 cut(s) | 439 |
| EcoRII | CCWGG | 1 cut(s) | 560 |
| EcoT14I | CCWWGG | 1 cut(s) | 318 |
| ErhI | CCWWGG | 1 cut(s) | 318 |
| FaeI | CATG | 4 cut(s) | 141, 457, 484, 646 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 16, 48, 426, 458 |
| FaqI | GGGAC | 2 cut(s) | 277, 597 |
| FatI | CATG | 4 cut(s) | 137, 453, 480, 642 |
| FauNDI | CATATG | 1 cut(s) | 630 |
| FokI | GGATG | 4 cut(s) | 83, 101, 374, 506 |
| FspBI | CTAG | 1 cut(s) | 36 |
| GlaI | GCGC | 1 cut(s) | 72 |
| HaeIII | GGCC | 1 cut(s) | 559 |
| HapII | CCGG | 1 cut(s) | 591 |
| HgaI | GACGC | 1 cut(s) | 32 |
| HhaI | GCGC | 1 cut(s) | 73 |
| Hin1II | CATG | 4 cut(s) | 141, 457, 484, 646 |
| Hin6I | GCGC | 1 cut(s) | 71 |
| HinP1I | GCGC | 1 cut(s) | 71 |
| HincII | GTYRAC | 1 cut(s) | 459 |
| HindII | GTYRAC | 1 cut(s) | 459 |
| HinfI | GANTC | 3 cut(s) | 110, 527, 639 |
| HpaII | CCGG | 1 cut(s) | 591 |
| HphI | GGTGA | 1 cut(s) | 617 |
| Hpy166II | GTNNAC | 1 cut(s) | 459 |
| Hpy188I | TCNGA | 3 cut(s) | 78, 207, 532 |
| Hpy188III | TCNNGA | 5 cut(s) | 82, 119, 289, 344, 692 |
| Hpy8I | GTNNAC | 1 cut(s) | 459 |
| Hpy99I | CGWCG | 2 cut(s) | 65, 536 |
| HpyAV | CCTTC | 6 cut(s) | 15, 42, 79, 352, 452, 698 |
| HpyCH4III | ACNGT | 3 cut(s) | 239, 396, 677 |
| HpyCH4IV | ACGT | 1 cut(s) | 153 |
| HpyCH4V | TGCA | 3 cut(s) | 141, 335, 388 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 138, 197 |
| HpyF3I | CTNAG | 1 cut(s) | 570 |
| HpySE526I | ACGT | 1 cut(s) | 153 |
| Hsp92II | CATG | 4 cut(s) | 141, 457, 484, 646 |
| HspAI | GCGC | 1 cut(s) | 71 |
| Kzo9I | GATC | 3 cut(s) | 78, 207, 604 |
| LpnPI | CCDG | 6 cut(s) | 118, 177, 547, 574, 604, 677 |
| LweI | GCATC | 1 cut(s) | 610 |
| MaeI | CTAG | 1 cut(s) | 36 |
| MaeII | ACGT | 1 cut(s) | 153 |
| MaeIII | GTNAC | 2 cut(s) | 390, 677 |
| MalI | GATC | 3 cut(s) | 80, 209, 606 |
| MboI | GATC | 3 cut(s) | 78, 207, 604 |
| MboII | GAAGA | 2 cut(s) | 551, 707 |
| MfeI | CAATTG | 1 cut(s) | 297 |
| MhlI | GDGCHC | 3 cut(s) | 202, 421, 675 |
| MluCI | AATT | 3 cut(s) | 212, 297, 660 |
| MlyI | GAGTC | 1 cut(s) | 536 |
| MmeI | TCCRAC | 2 cut(s) | 504, 555 |
| MroXI | GAANNNNTTC | 1 cut(s) | 638 |
| MseI | TTAA | 1 cut(s) | 222 |
| MspA1I | CMGCKG | 1 cut(s) | 191 |
| MspI | CCGG | 1 cut(s) | 591 |
| MspR9I | CCNGG | 1 cut(s) | 562 |
| MunI | CAATTG | 1 cut(s) | 297 |
| MvaI | CCWGG | 1 cut(s) | 562 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 138, 197 |
| NdeI | CATATG | 1 cut(s) | 630 |
| NdeII | GATC | 3 cut(s) | 78, 207, 604 |
| NlaIII | CATG | 4 cut(s) | 141, 457, 484, 646 |
| NlaIV | GGNNCC | 1 cut(s) | 585 |
| NmuCI | GTSAC | 2 cut(s) | 390, 677 |
| NspI | RCATGY | 1 cut(s) | 141 |
| PaeI | GCATGC | 1 cut(s) | 141 |
| PdmI | GAANNNNTTC | 1 cut(s) | 638 |
| PfeI | GAWTC | 2 cut(s) | 110, 639 |
| PinAI | ACCGGT | 1 cut(s) | 590 |
| PleI | GAGTC | 1 cut(s) | 535 |
| PpsI | GAGTC | 1 cut(s) | 535 |
| PpuMI | RGGWCCY | 1 cut(s) | 439 |
| Psp5II | RGGWCCY | 1 cut(s) | 439 |
| Psp6I | CCWGG | 1 cut(s) | 560 |
| PspGI | CCWGG | 1 cut(s) | 560 |
| PspN4I | GGNNCC | 1 cut(s) | 585 |
| PspPI | GGNCC | 4 cut(s) | 439, 558, 584, 646 |
| PspPPI | RGGWCCY | 1 cut(s) | 439 |
| RsaI | GTAC | 1 cut(s) | 248 |
| RsaNI | GTAC | 1 cut(s) | 247 |
| SaqAI | TTAA | 1 cut(s) | 222 |
| Sau3AI | GATC | 3 cut(s) | 78, 207, 604 |
| Sau96I | GGNCC | 4 cut(s) | 439, 558, 584, 646 |
| SchI | GAGTC | 1 cut(s) | 536 |
| ScrFI | CCNGG | 1 cut(s) | 562 |
| SduI | GDGCHC | 3 cut(s) | 202, 421, 675 |
| SfaNI | GCATC | 1 cut(s) | 610 |
| SinI | GGWCC | 3 cut(s) | 439, 584, 646 |
| SmlI | CTYRAG | 1 cut(s) | 342 |
| SmoI | CTYRAG | 1 cut(s) | 342 |
| SphI | GCATGC | 1 cut(s) | 141 |
| Sse9I | AATT | 3 cut(s) | 212, 297, 660 |
| SsiI | CCGC | 2 cut(s) | 189, 649 |
| SspMI | CTAG | 1 cut(s) | 36 |
| StyD4I | CCNGG | 1 cut(s) | 560 |
| StyI | CCWWGG | 1 cut(s) | 318 |
| TaaI | ACNGT | 3 cut(s) | 239, 396, 677 |
| TaiI | ACGT | 1 cut(s) | 156 |
| TaqI | TCGA | 4 cut(s) | 274, 327, 445, 489 |
| TasI | AATT | 3 cut(s) | 212, 297, 660 |
| TfiI | GAWTC | 2 cut(s) | 110, 639 |
| Tru1I | TTAA | 1 cut(s) | 222 |
| Tru9I | TTAA | 1 cut(s) | 222 |
| TseFI | GTSAC | 2 cut(s) | 390, 677 |
| Tsp45I | GTSAC | 2 cut(s) | 390, 677 |
| TspDTI | ATGAA | 3 cut(s) | 552, 631, 647 |
| TspGWI | ACGGA | 1 cut(s) | 651 |
| VpaK11BI | GGWCC | 3 cut(s) | 439, 584, 646 |
| XceI | RCATGY | 1 cut(s) | 141 |
| XmnI | GAANNNNTTC | 1 cut(s) | 638 |
| XspI | CTAG | 1 cut(s) | 36 |