Plant transposon protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 63 |
| AclI | AACGTT | 1 cut(s) | 227 |
| AclWI | GGATC | 2 cut(s) | 107, 162 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 73, 84, 85 |
| AgeI | ACCGGT | 1 cut(s) | 98 |
| AgsI | TTSAA | 3 cut(s) | 142, 200, 232 |
| AjnI | CCWGG | 1 cut(s) | 78 |
| AlwI | GGATC | 2 cut(s) | 107, 162 |
| AoxI | GGCC | 2 cut(s) | 64, 75 |
| AsiGI | ACCGGT | 1 cut(s) | 98 |
| AspS9I | GGNCC | 3 cut(s) | 65, 76, 92 |
| AsuHPI | GGTGA | 1 cut(s) | 113 |
| AvaII | GGWCC | 1 cut(s) | 92 |
| BccI | CCATC | 1 cut(s) | 122 |
| BciT130I | CCWGG | 1 cut(s) | 80 |
| BfaI | CTAG | 1 cut(s) | 249 |
| BglII | AGATCT | 1 cut(s) | 245 |
| BisI | GCNGC | 1 cut(s) | 64 |
| BlsI | GCNGC | 1 cut(s) | 65 |
| Bme1390I | CCNGG | 1 cut(s) | 80 |
| Bme18I | GGWCC | 1 cut(s) | 92 |
| BmgT120I | GGNCC | 3 cut(s) | 65, 76, 92 |
| BmrFI | CCNGG | 1 cut(s) | 80 |
| BmsI | GCATC | 1 cut(s) | 154 |
| Bsa29I | ATCGAT | 1 cut(s) | 157 |
| BsaBI | GATNNNNATC | 1 cut(s) | 250 |
| BsaJI | CCNNGG | 1 cut(s) | 78 |
| BsaWI | WCCGGW | 1 cut(s) | 98 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 73, 84, 85 |
| Bse118I | RCCGGY | 1 cut(s) | 98 |
| Bse8I | GATNNNNATC | 1 cut(s) | 250 |
| BseBI | CCWGG | 1 cut(s) | 80 |
| BseCI | ATCGAT | 1 cut(s) | 157 |
| BseDI | CCNNGG | 1 cut(s) | 78 |
| BseJI | GATNNNNATC | 1 cut(s) | 250 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 73, 84, 85 |
| Bsh1285I | CGRYCG | 1 cut(s) | 99 |
| BshFI | GGCC | 2 cut(s) | 66, 77 |
| BshTI | ACCGGT | 1 cut(s) | 98 |
| BshVI | ATCGAT | 1 cut(s) | 157 |
| BsiEI | CGRYCG | 1 cut(s) | 99 |
| BsiSI | CCGG | 1 cut(s) | 99 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 73, 84, 85 |
| BsnI | GGCC | 2 cut(s) | 66, 77 |
| Bsp143I | GATC | 4 cut(s) | 112, 154, 245, 251 |
| BspACI | CCGC | 1 cut(s) | 63 |
| BspANI | GGCC | 2 cut(s) | 66, 77 |
| BspDI | ATCGAT | 1 cut(s) | 157 |
| BspPI | GGATC | 2 cut(s) | 107, 162 |
| BsrFI | RCCGGY | 1 cut(s) | 98 |
| BssAI | RCCGGY | 1 cut(s) | 98 |
| BssECI | CCNNGG | 1 cut(s) | 78 |
| BssMI | GATC | 4 cut(s) | 112, 154, 245, 251 |
| Bst2UI | CCWGG | 1 cut(s) | 80 |
| Bst4CI | ACNGT | 1 cut(s) | 185 |
| Bst6I | CTCTTC | 1 cut(s) | 41 |
| BstKTI | GATC | 4 cut(s) | 115, 157, 248, 254 |
| BstMBI | GATC | 4 cut(s) | 112, 154, 245, 251 |
| BstMCI | CGRYCG | 1 cut(s) | 99 |
| BstNI | CCWGG | 1 cut(s) | 80 |
| BstNSI | RCATGY | 1 cut(s) | 243 |
| BstSCI | CCNGG | 1 cut(s) | 78 |
| BstX2I | RGATCY | 1 cut(s) | 245 |
| BstYI | RGATCY | 1 cut(s) | 245 |
| Bsu15I | ATCGAT | 1 cut(s) | 157 |
| BsuRI | GGCC | 2 cut(s) | 66, 77 |
| BsuTUI | ATCGAT | 1 cut(s) | 157 |
| BtgZI | GCGATG | 1 cut(s) | 35 |
| Cfr10I | RCCGGY | 1 cut(s) | 98 |
| Cfr13I | GGNCC | 3 cut(s) | 65, 76, 92 |
| ClaI | ATCGAT | 1 cut(s) | 157 |
| CspAI | ACCGGT | 1 cut(s) | 98 |
| CviAII | CATG | 2 cut(s) | 151, 240 |
| CviJI | RGCY | 2 cut(s) | 66, 77 |
| CviKI_1 | RGCY | 2 cut(s) | 66, 77 |
| DpnI | GATC | 4 cut(s) | 114, 156, 247, 253 |
| DpnII | GATC | 4 cut(s) | 112, 154, 245, 251 |
| Eam1104I | CTCTTC | 1 cut(s) | 41 |
| EarI | CTCTTC | 1 cut(s) | 41 |
| Eco47I | GGWCC | 1 cut(s) | 92 |
| EcoRII | CCWGG | 1 cut(s) | 78 |
| FaeI | CATG | 2 cut(s) | 154, 243 |
| FaiI | YATR | 5 cut(s) | 61, 152, 162, 241, 256 |
| FatI | CATG | 2 cut(s) | 150, 239 |
| Fnu4HI | GCNGC | 1 cut(s) | 64 |
| Fsp4HI | GCNGC | 1 cut(s) | 64 |
| FspBI | CTAG | 1 cut(s) | 249 |
| GluI | GCNGC | 1 cut(s) | 64 |
| HaeIII | GGCC | 2 cut(s) | 66, 77 |
| HapII | CCGG | 1 cut(s) | 99 |
| Hin1II | CATG | 2 cut(s) | 154, 243 |
| HinfI | GANTC | 2 cut(s) | 34, 147 |
| HpaII | CCGG | 1 cut(s) | 99 |
| HphI | GGTGA | 1 cut(s) | 113 |
| Hpy188I | TCNGA | 2 cut(s) | 39, 224 |
| Hpy188III | TCNNGA | 2 cut(s) | 200, 249 |
| HpyAV | CCTTC | 2 cut(s) | 83, 206 |
| HpyCH4III | ACNGT | 1 cut(s) | 185 |
| HpyCH4IV | ACGT | 1 cut(s) | 227 |
| HpyCH4V | TGCA | 3 cut(s) | 167, 179, 243 |
| HpySE526I | ACGT | 1 cut(s) | 227 |
| Hsp92II | CATG | 2 cut(s) | 154, 243 |
| Kzo9I | GATC | 4 cut(s) | 112, 154, 245, 251 |
| LpnPI | CCDG | 4 cut(s) | 23, 65, 92, 112 |
| LweI | GCATC | 1 cut(s) | 154 |
| MaeI | CTAG | 1 cut(s) | 249 |
| MaeII | ACGT | 1 cut(s) | 227 |
| MaeIII | GTNAC | 1 cut(s) | 185 |
| MalI | GATC | 4 cut(s) | 114, 156, 247, 253 |
| MboI | GATC | 4 cut(s) | 112, 154, 245, 251 |
| MboII | GAAGA | 3 cut(s) | 52, 58, 215 |
| MflI | RGATCY | 1 cut(s) | 245 |
| MluCI | AATT | 1 cut(s) | 168 |
| MlyI | GAGTC | 1 cut(s) | 43 |
| MnlI | CCTC | 1 cut(s) | 42 |
| MspI | CCGG | 1 cut(s) | 99 |
| MspR9I | CCNGG | 1 cut(s) | 80 |
| MvaI | CCWGG | 1 cut(s) | 80 |
| NdeII | GATC | 4 cut(s) | 112, 154, 245, 251 |
| NlaIII | CATG | 2 cut(s) | 154, 243 |
| NmuCI | GTSAC | 1 cut(s) | 185 |
| NspI | RCATGY | 1 cut(s) | 243 |
| PfeI | GAWTC | 1 cut(s) | 147 |
| PinAI | ACCGGT | 1 cut(s) | 98 |
| PkrI | GCNGC | 1 cut(s) | 65 |
| PleI | GAGTC | 1 cut(s) | 42 |
| PpsI | GAGTC | 1 cut(s) | 42 |
| Psp1406I | AACGTT | 1 cut(s) | 227 |
| Psp6I | CCWGG | 1 cut(s) | 78 |
| PspGI | CCWGG | 1 cut(s) | 78 |
| PspPI | GGNCC | 3 cut(s) | 65, 76, 92 |
| PsuI | RGATCY | 1 cut(s) | 245 |
| SatI | GCNGC | 1 cut(s) | 64 |
| Sau3AI | GATC | 4 cut(s) | 112, 154, 245, 251 |
| Sau96I | GGNCC | 3 cut(s) | 65, 76, 92 |
| SchI | GAGTC | 1 cut(s) | 43 |
| ScrFI | CCNGG | 1 cut(s) | 80 |
| SetI | ASST | 3 cut(s) | 84, 198, 230 |
| SfaNI | GCATC | 1 cut(s) | 154 |
| SgeI | CNNG | 8 cut(s) | 22, 91, 92, 111, 163, 212, 244, 252 |
| SinI | GGWCC | 1 cut(s) | 92 |
| Sse9I | AATT | 1 cut(s) | 168 |
| SsiI | CCGC | 1 cut(s) | 63 |
| SspMI | CTAG | 1 cut(s) | 249 |
| StyD4I | CCNGG | 1 cut(s) | 78 |
| TaaI | ACNGT | 1 cut(s) | 185 |
| TaiI | ACGT | 1 cut(s) | 230 |
| TaqI | TCGA | 2 cut(s) | 111, 157 |
| TaqII | GACCGA | 1 cut(s) | 109 |
| TasI | AATT | 1 cut(s) | 168 |
| TauI | GCSGC | 1 cut(s) | 66 |
| TfiI | GAWTC | 1 cut(s) | 147 |
| TseFI | GTSAC | 1 cut(s) | 185 |
| Tsp45I | GTSAC | 1 cut(s) | 185 |
| TspDTI | ATGAA | 3 cut(s) | 17, 59, 139 |
| TspGWI | ACGGA | 1 cut(s) | 159 |
| VpaK11BI | GGWCC | 1 cut(s) | 92 |
| XbaI | TCTAGA | 1 cut(s) | 248 |
| XceI | RCATGY | 1 cut(s) | 243 |
| XspI | CTAG | 1 cut(s) | 249 |