Ribosomal protein-like protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| zf-C3HC4_3 | PF13920 | 228 - 269 | 9.7e-09 | Zinc finger, C3HC4 type (RING finger) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 569 |
| AciI | CCGC | 4 cut(s) | 105, 146, 149, 561 |
| AcsI | RAATTY | 1 cut(s) | 67 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 50 |
| AgsI | TTSAA | 6 cut(s) | 11, 130, 394, 427, 529, 542 |
| AjnI | CCWGG | 1 cut(s) | 184 |
| AluBI | AGCT | 5 cut(s) | 154, 203, 251, 385, 442 |
| AluI | AGCT | 5 cut(s) | 154, 203, 251, 385, 442 |
| Alw21I | GWGCWC | 1 cut(s) | 444 |
| ApeKI | GCWGC | 4 cut(s) | 151, 248, 340, 696 |
| ApoI | RAATTY | 1 cut(s) | 67 |
| AspLEI | GCGC | 1 cut(s) | 16 |
| AsuNHI | GCTAGC | 1 cut(s) | 809 |
| BanI | GGYRCC | 1 cut(s) | 569 |
| BanII | GRGCYC | 1 cut(s) | 444 |
| BbsI | GAAGAC | 1 cut(s) | 630 |
| Bbv12I | GWGCWC | 1 cut(s) | 444 |
| BbvI | GCAGC | 4 cut(s) | 163, 260, 352, 683 |
| BccI | CCATC | 2 cut(s) | 67, 676 |
| BciT130I | CCWGG | 1 cut(s) | 186 |
| BfaI | CTAG | 2 cut(s) | 810, 832 |
| BfmI | CTRYAG | 1 cut(s) | 733 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 764 |
| BisI | GCNGC | 6 cut(s) | 149, 152, 249, 341, 561, 697 |
| BlsI | GCNGC | 6 cut(s) | 150, 153, 250, 342, 562, 698 |
| Bme1390I | CCNGG | 1 cut(s) | 186 |
| BmiI | GGNNCC | 1 cut(s) | 571 |
| BmrFI | CCNGG | 1 cut(s) | 186 |
| BmsI | GCATC | 3 cut(s) | 571, 748, 766 |
| BmtI | GCTAGC | 1 cut(s) | 813 |
| BpiI | GAAGAC | 1 cut(s) | 630 |
| Bpu10I | CCTNAGC | 2 cut(s) | 252, 498 |
| BpuEI | CTTGAG | 1 cut(s) | 475 |
| BsaBI | GATNNNNATC | 1 cut(s) | 285 |
| BsaJI | CCNNGG | 2 cut(s) | 513, 573 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 50 |
| Bse8I | GATNNNNATC | 1 cut(s) | 285 |
| BseBI | CCWGG | 1 cut(s) | 186 |
| BseDI | CCNNGG | 2 cut(s) | 513, 573 |
| BseGI | GGATG | 1 cut(s) | 409 |
| BseJI | GATNNNNATC | 1 cut(s) | 285 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 50 |
| BseMII | CTCAG | 3 cut(s) | 266, 304, 512 |
| BseRI | GAGGAG | 2 cut(s) | 626, 657 |
| BseXI | GCAGC | 4 cut(s) | 163, 260, 352, 683 |
| BseYI | CCCAGC | 1 cut(s) | 199 |
| BshNI | GGYRCC | 1 cut(s) | 569 |
| BsiHKAI | GWGCWC | 1 cut(s) | 444 |
| BslFI | GGGAC | 1 cut(s) | 182 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 50 |
| BsmFI | GGGAC | 1 cut(s) | 182 |
| Bsp1286I | GDGCHC | 1 cut(s) | 444 |
| Bsp19I | CCATGG | 2 cut(s) | 513, 573 |
| BspACI | CCGC | 4 cut(s) | 105, 146, 149, 561 |
| BspCNI | CTCAG | 3 cut(s) | 265, 303, 511 |
| BspLI | GGNNCC | 1 cut(s) | 571 |
| BspMAI | CTGCAG | 1 cut(s) | 737 |
| BspOI | GCTAGC | 1 cut(s) | 813 |
| BspT107I | GGYRCC | 1 cut(s) | 569 |
| BssECI | CCNNGG | 2 cut(s) | 513, 573 |
| BssT1I | CCWWGG | 2 cut(s) | 513, 573 |
| Bst2UI | CCWGG | 1 cut(s) | 186 |
| Bst4CI | ACNGT | 1 cut(s) | 546 |
| Bst6I | CTCTTC | 2 cut(s) | 425, 663 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 696 |
| BstC8I | GCNNGC | 3 cut(s) | 737, 769, 811 |
| BstDEI | CTNAG | 3 cut(s) | 252, 290, 498 |
| BstDSI | CCRYGG | 2 cut(s) | 513, 573 |
| BstF5I | GGATG | 1 cut(s) | 409 |
| BstHHI | GCGC | 1 cut(s) | 16 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 11, 145, 569, 696, 764 |
| BstNI | CCWGG | 1 cut(s) | 186 |
| BstSCI | CCNGG | 1 cut(s) | 184 |
| BstSFI | CTRYAG | 1 cut(s) | 733 |
| BstV1I | GCAGC | 4 cut(s) | 163, 260, 352, 683 |
| BstV2I | GAAGAC | 1 cut(s) | 630 |
| BtgI | CCRYGG | 2 cut(s) | 513, 573 |
| BtsCI | GGATG | 1 cut(s) | 409 |
| Cac8I | GCNNGC | 3 cut(s) | 737, 769, 811 |
| CfoI | GCGC | 1 cut(s) | 16 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 73, 108 |
| CviAII | CATG | 4 cut(s) | 223, 514, 574, 750 |
| DdeI | CTNAG | 3 cut(s) | 252, 290, 498 |
| Eam1104I | CTCTTC | 2 cut(s) | 425, 663 |
| EarI | CTCTTC | 2 cut(s) | 425, 663 |
| Ecl136II | GAGCTC | 1 cut(s) | 442 |
| Eco130I | CCWWGG | 2 cut(s) | 513, 573 |
| Eco24I | GRGCYC | 1 cut(s) | 444 |
| Eco53kI | GAGCTC | 1 cut(s) | 442 |
| EcoICRI | GAGCTC | 1 cut(s) | 442 |
| EcoRII | CCWGG | 1 cut(s) | 184 |
| EcoT14I | CCWWGG | 2 cut(s) | 513, 573 |
| EcoT38I | GRGCYC | 1 cut(s) | 444 |
| ErhI | CCWWGG | 2 cut(s) | 513, 573 |
| FaeI | CATG | 4 cut(s) | 226, 517, 577, 753 |
| FaiI | YATR | 7 cut(s) | 224, 231, 515, 521, 575, 751, 815 |
| FaqI | GGGAC | 1 cut(s) | 182 |
| FatI | CATG | 4 cut(s) | 222, 513, 573, 749 |
| Fnu4HI | GCNGC | 6 cut(s) | 149, 152, 249, 341, 561, 697 |
| FokI | GGATG | 1 cut(s) | 416 |
| FriOI | GRGCYC | 1 cut(s) | 444 |
| Fsp4HI | GCNGC | 6 cut(s) | 149, 152, 249, 341, 561, 697 |
| FspBI | CTAG | 2 cut(s) | 810, 832 |
| GlaI | GCGC | 1 cut(s) | 15 |
| GluI | GCNGC | 6 cut(s) | 149, 152, 249, 341, 561, 697 |
| GsaI | CCCAGC | 1 cut(s) | 203 |
| HhaI | GCGC | 1 cut(s) | 16 |
| Hin1II | CATG | 4 cut(s) | 226, 517, 577, 753 |
| Hin6I | GCGC | 1 cut(s) | 14 |
| HinP1I | GCGC | 1 cut(s) | 14 |
| HinfI | GANTC | 4 cut(s) | 31, 181, 371, 587 |
| Hpy166II | GTNNAC | 2 cut(s) | 79, 605 |
| Hpy188I | TCNGA | 4 cut(s) | 28, 45, 293, 551 |
| Hpy188III | TCNNGA | 5 cut(s) | 254, 375, 454, 500, 539 |
| Hpy8I | GTNNAC | 2 cut(s) | 79, 605 |
| HpyAV | CCTTC | 1 cut(s) | 799 |
| HpyCH4III | ACNGT | 1 cut(s) | 546 |
| HpyCH4V | TGCA | 8 cut(s) | 208, 248, 584, 690, 699, 735, 753, 792 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 11, 145, 569, 696, 764 |
| HpyF3I | CTNAG | 3 cut(s) | 252, 290, 498 |
| Hsp92II | CATG | 4 cut(s) | 226, 517, 577, 753 |
| HspAI | GCGC | 1 cut(s) | 14 |
| LmnI | GCTCC | 1 cut(s) | 439 |
| Lsp1109I | GCAGC | 4 cut(s) | 163, 260, 352, 683 |
| LweI | GCATC | 3 cut(s) | 571, 748, 766 |
| MaeI | CTAG | 2 cut(s) | 810, 832 |
| MhlI | GDGCHC | 1 cut(s) | 444 |
| MluCI | AATT | 3 cut(s) | 67, 461, 700 |
| MlyI | GAGTC | 2 cut(s) | 380, 596 |
| MnlI | CCTC | 9 cut(s) | 450, 460, 604, 607, 635, 638, 737, 757, 811 |
| MseI | TTAA | 2 cut(s) | 114, 651 |
| MslI | CAYNNNNRTG | 1 cut(s) | 518 |
| MspR9I | CCNGG | 1 cut(s) | 186 |
| MvaI | CCWGG | 1 cut(s) | 186 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 11, 145, 569, 696, 764 |
| NcoI | CCATGG | 2 cut(s) | 513, 573 |
| NheI | GCTAGC | 1 cut(s) | 809 |
| NlaIII | CATG | 4 cut(s) | 226, 517, 577, 753 |
| NlaIV | GGNNCC | 1 cut(s) | 571 |
| PfeI | GAWTC | 2 cut(s) | 31, 181 |
| PkrI | GCNGC | 6 cut(s) | 150, 153, 250, 342, 562, 698 |
| PleI | GAGTC | 2 cut(s) | 379, 595 |
| PpsI | GAGTC | 2 cut(s) | 379, 595 |
| Psp124BI | GAGCTC | 1 cut(s) | 444 |
| Psp6I | CCWGG | 1 cut(s) | 184 |
| PspFI | CCCAGC | 1 cut(s) | 199 |
| PspGI | CCWGG | 1 cut(s) | 184 |
| PspN4I | GGNNCC | 1 cut(s) | 571 |
| PstI | CTGCAG | 1 cut(s) | 737 |
| RseI | CAYNNNNRTG | 1 cut(s) | 518 |
| SacI | GAGCTC | 1 cut(s) | 444 |
| SaqAI | TTAA | 2 cut(s) | 114, 651 |
| SatI | GCNGC | 6 cut(s) | 149, 152, 249, 341, 561, 697 |
| SbfI | CCTGCAGG | 1 cut(s) | 737 |
| SchI | GAGTC | 2 cut(s) | 380, 596 |
| ScrFI | CCNGG | 1 cut(s) | 186 |
| SdaI | CCTGCAGG | 1 cut(s) | 737 |
| SduI | GDGCHC | 1 cut(s) | 444 |
| SetI | ASST | 6 cut(s) | 156, 205, 253, 387, 444, 713 |
| SfaNI | GCATC | 3 cut(s) | 571, 748, 766 |
| SfcI | CTRYAG | 1 cut(s) | 733 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 518 |
| SmlI | CTYRAG | 1 cut(s) | 454 |
| SmoI | CTYRAG | 1 cut(s) | 454 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 737 |
| Sse9I | AATT | 3 cut(s) | 67, 461, 700 |
| SsiI | CCGC | 4 cut(s) | 105, 146, 149, 561 |
| SspMI | CTAG | 2 cut(s) | 810, 832 |
| SstI | GAGCTC | 1 cut(s) | 444 |
| StyD4I | CCNGG | 1 cut(s) | 184 |
| StyI | CCWWGG | 2 cut(s) | 513, 573 |
| TaaI | ACNGT | 1 cut(s) | 546 |
| TaqI | TCGA | 3 cut(s) | 235, 369, 444 |
| TasI | AATT | 3 cut(s) | 67, 461, 700 |
| TauI | GCSGC | 2 cut(s) | 151, 563 |
| TfiI | GAWTC | 2 cut(s) | 31, 181 |
| Tru1I | TTAA | 2 cut(s) | 114, 651 |
| Tru9I | TTAA | 2 cut(s) | 114, 651 |
| TseI | GCWGC | 4 cut(s) | 151, 248, 340, 696 |
| TspDTI | ATGAA | 5 cut(s) | 194, 374, 420, 681, 738 |
| XapI | RAATTY | 1 cut(s) | 67 |
| XspI | CTAG | 2 cut(s) | 810, 832 |