Rmu_sc0002095.1_g000001

Ribosomal protein-like protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002095.1
Physical Location & Seq
Reverse (-)
1772 .. 6646
4875 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002095.1_g000001.1.cds

Sequence Viewer

Length: 1293 bp
atggaagctcattccaagaaaatggcagaagtcaagctcttcagaacatggtctagccgttttgctttgagaatagtctgggcactgaagctcaaagatgtccaatatgataccatctttgaagatctctcaaacaaaagccctctgcttcttcaatacaaccctgttcataagaaggttccagtgcttgtgcacaatggaaaatcagttgctgaatcacttgtgatccttgaatacattgaagaaacatggaaacagaaccctttgctatccgaagatcctcacgaaagagctgctgcacgcttttgggcaaaatttaatgatgaaaaggatgaggatgatgaagagatgatggccaccaacgccattgtcatggctgcagtcgctcaagaatctggaaaccaacaccgagggcgcggttctcatccgggtcgtgcaccaaatgaggaacgatttagagaagacaggggcaaaggtatgttggccgactactttgtcgatcggccagtgttcaaagatgcggagttccgaacacgttacaggatgagtctcaatctcttccagcgtatatctactgacctttgccagtatgatcgttactttgttcaaaggtcagatgctactggcaaagtcggactgcttccggagcagaagatgacagctgccttgcgaatgcttgcgtacggtgcaggggcagatcaatgtgctgagtattgtaggatggcgaaatccacctccgttgcagcccttcagcacttcacacgaggaattgttgatctttactcaacaaaatacctccgcgctccaactgcagccgacctcagacgacttcttaccaaagctgagaggagaggttttccaggaatgattgggagcatcgactgtatgcattggcaatggaagaattgtccgacaggttgggctggagaatatagtggtaggaaacagatccccactatcatcctggaagcagtcgcatcttacgacacctggatttggcacgcattctttggagtgcctggggcatgcaacgacctgaacgtcttggcaaagtctccattgtttgatgagcttaccgccggtagagcacctcttgtccaattccaagttaacaacagagctcacaatctagggtactatctcgccgacggtatttatcctcgatgggcgactttcttgaaaactgttcgaaatcctacacgccccaaggaaatcgagtttgcaaaggctcaagaggggtacctatttgatcattttaaaagtccaggtaccattcagtccggtcagacatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

430

Amino Acids

49.13

Weight (kDa)

8.92

Isoelectric Point (pI)

37.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000010)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G13770 AT3G22935
fragaria_vesca FvH4_1g19462 FvH4_1g21002 FvH4_1g21032 FvH4_2g02513 FvH4_2g07131 FvH4_2g22601 FvH4_3g23931 FvH4_3g29161 FvH4_3g32681 FvH4_3g39621 FvH4_3g45901 FvH4_4g04071 FvH4_4g14181 FvH4_4g15491 FvH4_4g18642 FvH4_5g16781 FvH4_5g29682 FvH4_6g04374 FvH4_6g34461 FvH4_7g17722
malus_domestica MD00G1014100.v1.1 MD04G1011800.v1.1 MD13G1144100.v1.1 MD16G1019600.v1.1
pyrus_communis pycom01g04210 pycom01g12000 pycom01g15890 pycom01g19860 pycom02g17740 pycom02g18820 pycom02g21290 pycom03g10610 pycom03g10620 pycom03g17650 pycom03g18850 pycom04g02580 pycom04g11550 pycom04g16020 pycom04g16970 pycom04g20620 pycom05g02050 pycom05g15110 pycom05g19320 pycom05g22740 pycom05g23390 pycom05g24260 pycom05g27160 pycom06g05770 pycom06g08260 pycom06g20210 pycom07g00590 pycom07g11710 pycom07g13480 pycom07g22590 pycom08g12830 pycom08g12840 pycom08g19000 pycom09g03170 pycom09g11430 pycom10g02750 pycom10g08960 pycom10g11510 pycom11g12790 pycom11g12880 pycom11g21440 pycom11g22100 pycom11g23860 pycom12g08170 pycom13g17360 pycom13g20660 pycom13g21760 pycom13g23260 pycom13g24410 pycom13g27100 pycom14g09220 pycom15g14620 pycom15g17850 pycom15g25990 pycom15g32010 pycom15g33600 pycom16g19290 pycom16g20120 pycom16g20860 pycom16g24310 pycom16g24320 pycom17g02330 pycom17g14100 pycom17g19860 pycom17g21640
rosa_chinensis RchiOBHm_Chr1g0318041 RchiOBHm_Chr1g0318051 RchiOBHm_Chr2g0149311 RchiOBHm_Chr3g0476341 RchiOBHm_Chr4g0399161 RchiOBHm_Chr6g0260671 RchiOBHm_Chr7g0200351 RchiOBHm_Chr7g0225121
rosa_laevigata RLG00000002081 RLG00000002132 RLG00000002369 RLG00000003014 RLG00000012993 RLG00000028325 RLG00000028526 RLG00000031672
rosa_multiflora Rmu_co8010630.1_g000001 Rmu_co8061670.1_g000001 Rmu_co8090380.1_g000001 Rmu_co8160814.1_g000001 Rmu_co8191344.1_g000001 Rmu_co8211728.1_g000001 Rmu_co8219216.1_g000001 Rmu_co8253645.1_g000001 Rmu_co8255909.1_g000001 Rmu_co8255973.1_g000001 Rmu_co8279463.1_g000001 Rmu_co8284749.1_g000001 Rmu_co8296329.1_g000001 Rmu_co8303277.1_g000001 Rmu_co8318269.1_g000001 Rmu_co8335959.1_g000001 Rmu_co8388437.1_g000001 Rmu_co8404601.1_g000001 Rmu_co8423343.1_g000001 Rmu_co8486883.1_g000001 Rmu_sc0000018.1_g000004 Rmu_sc0000026.1_g000008 Rmu_sc0000030.1_g000021 Rmu_sc0000070.1_g000062 Rmu_sc0000079.1_g000034 Rmu_sc0000098.1_g000005 Rmu_sc0000116.1_g000007 Rmu_sc0000129.1_g000008 Rmu_sc0000161.1_g000003 Rmu_sc0000206.1_g000016 Rmu_sc0000215.1_g000009 Rmu_sc0000242.1_g000001 Rmu_sc0000288.1_g000016 Rmu_sc0000288.1_g000017 Rmu_sc0000306.1_g000001 Rmu_sc0000332.1_g000007 Rmu_sc0000333.1_g000042 Rmu_sc0000347.1_g000019 Rmu_sc0000353.1_g000030 Rmu_sc0000361.1_g000010 Rmu_sc0000363.1_g000004 Rmu_sc0000382.1_g000026 Rmu_sc0000441.1_g000136 Rmu_sc0000453.1_g000011 Rmu_sc0000455.1_g000004 Rmu_sc0000479.1_g000004 Rmu_sc0000501.1_g000030 Rmu_sc0000536.1_g000033 Rmu_sc0000546.1_g000078 Rmu_sc0000547.1_g000009 Rmu_sc0000565.1_g000016 Rmu_sc0000610.1_g000021 Rmu_sc0000656.1_g000005 Rmu_sc0000656.1_g000006 Rmu_sc0000663.1_g000016 Rmu_sc0000698.1_g000090 Rmu_sc0000698.1_g000091 Rmu_sc0000713.1_g000007 Rmu_sc0000745.1_g000018 Rmu_sc0000854.1_g000017 Rmu_sc0000857.1_g000020 Rmu_sc0000861.1_g000010 Rmu_sc0000894.1_g000046 Rmu_sc0000918.1_g000034 Rmu_sc0000924.1_g000053 Rmu_sc0000965.1_g000013 Rmu_sc0001047.1_g000027 Rmu_sc0001058.1_g000007 Rmu_sc0001068.1_g000010 Rmu_sc0001072.1_g000016 Rmu_sc0001096.1_g000019 Rmu_sc0001140.1_g000004 Rmu_sc0001144.1_g000041 Rmu_sc0001158.1_g000005 Rmu_sc0001158.1_g000006 Rmu_sc0001159.1_g000052 Rmu_sc0001208.1_g000024 Rmu_sc0001208.1_g000025 Rmu_sc0001227.1_g000013 Rmu_sc0001227.1_g000014 Rmu_sc0001240.1_g000012 Rmu_sc0001260.1_g000009 Rmu_sc0001298.1_g000016 Rmu_sc0001298.1_g000017 Rmu_sc0001339.1_g000010 Rmu_sc0001346.1_g000005 Rmu_sc0001347.1_g000018 Rmu_sc0001348.1_g000016 Rmu_sc0001348.1_g000025 Rmu_sc0001365.1_g000006 Rmu_sc0001386.1_g000006 Rmu_sc0001460.1_g000003 Rmu_sc0001496.1_g000001 Rmu_sc0001501.1_g000056 Rmu_sc0001551.1_g000019 Rmu_sc0001551.1_g000020 Rmu_sc0001565.1_g000059 Rmu_sc0001585.1_g000014 Rmu_sc0001617.1_g000044 Rmu_sc0001630.1_g000027 Rmu_sc0001653.1_g000010 Rmu_sc0001699.1_g000019 Rmu_sc0001699.1_g000020 Rmu_sc0001700.1_g000040 Rmu_sc0001702.1_g000034 Rmu_sc0001711.1_g000016 Rmu_sc0001715.1_g000019 Rmu_sc0001715.1_g000020 Rmu_sc0001768.1_g000037 Rmu_sc0001782.1_g000047 Rmu_sc0001782.1_g000048 Rmu_sc0001803.1_g000036 Rmu_sc0001823.1_g000004 Rmu_sc0001832.1_g000010 Rmu_sc0001832.1_g000014 Rmu_sc0001838.1_g000002 Rmu_sc0001840.1_g000015 Rmu_sc0001873.1_g000003 Rmu_sc0001877.1_g000013 Rmu_sc0001966.1_g000032 Rmu_sc0001977.1_g000021 Rmu_sc0001991.1_g000009 Rmu_sc0001998.1_g000006 Rmu_sc0002011.1_g000029 Rmu_sc0002012.1_g000013 Rmu_sc0002042.1_g000007 Rmu_sc0002091.1_g000014 Rmu_sc0002095.1_g000001 Rmu_sc0002116.1_g000007 Rmu_sc0002116.1_g000008 Rmu_sc0002188.1_g000005 Rmu_sc0002188.1_g000006 Rmu_sc0002235.1_g000096 Rmu_sc0002269.1_g000014 Rmu_sc0002269.1_g000015 Rmu_sc0002312.1_g000022 Rmu_sc0002312.1_g000045 Rmu_sc0002316.1_g000011 Rmu_sc0002357.1_g000040 Rmu_sc0002365.1_g000020 Rmu_sc0002365.1_g000021 Rmu_sc0002369.1_g000023 Rmu_sc0002372.1_g000043 Rmu_sc0002414.1_g000036 Rmu_sc0002438.1_g000029 Rmu_sc0002545.1_g000002 Rmu_sc0002545.1_g000031 Rmu_sc0002548.1_g000006 Rmu_sc0002553.1_g000003 Rmu_sc0002666.1_g000006 Rmu_sc0002775.1_g000009 Rmu_sc0002791.1_g000010 Rmu_sc0002801.1_g000024 Rmu_sc0002809.1_g000035 Rmu_sc0002868.1_g000021 Rmu_sc0002877.1_g000006 Rmu_sc0002877.1_g000007 Rmu_sc0002983.1_g000009 Rmu_sc0003002.1_g000006 Rmu_sc0003018.1_g000004 Rmu_sc0003073.1_g000017 Rmu_sc0003074.1_g000016 Rmu_sc0003151.1_g000027 Rmu_sc0003244.1_g000015 Rmu_sc0003259.1_g000002 Rmu_sc0003259.1_g000003 Rmu_sc0003265.1_g000002 Rmu_sc0003304.1_g000012 Rmu_sc0003317.1_g000013 Rmu_sc0003393.1_g000001 Rmu_sc0003436.1_g000005 Rmu_sc0003438.1_g000001 Rmu_sc0003438.1_g000002 Rmu_sc0003450.1_g000006 Rmu_sc0003507.1_g000035 Rmu_sc0003525.1_g000008 Rmu_sc0003541.1_g000013 Rmu_sc0003543.1_g000012 Rmu_sc0003629.1_g000007 Rmu_sc0003630.1_g000041 Rmu_sc0003636.1_g000003 Rmu_sc0003686.1_g000003 Rmu_sc0003722.1_g000051 Rmu_sc0003730.1_g000008 Rmu_sc0003731.1_g000006 Rmu_sc0003749.1_g000002 Rmu_sc0003762.1_g000015 Rmu_sc0003785.1_g000018 Rmu_sc0003846.1_g000002 Rmu_sc0003846.1_g000003 Rmu_sc0003846.1_g000004 Rmu_sc0003880.1_g000018 Rmu_sc0003882.1_g000034 Rmu_sc0003902.1_g000021 Rmu_sc0003953.1_g000013 Rmu_sc0003962.1_g000005 Rmu_sc0004048.1_g000014 Rmu_sc0004048.1_g000015 Rmu_sc0004068.1_g000003 Rmu_sc0004088.1_g000007 Rmu_sc0004092.1_g000028 Rmu_sc0004101.1_g000007 Rmu_sc0004115.1_g000005 Rmu_sc0004259.1_g000002 Rmu_sc0004298.1_g000011 Rmu_sc0004298.1_g000016 Rmu_sc0004298.1_g000017 Rmu_sc0004469.1_g000005 Rmu_sc0004481.1_g000018 Rmu_sc0004486.1_g000004 Rmu_sc0004507.1_g000009 Rmu_sc0004514.1_g000032 Rmu_sc0004523.1_g000008 Rmu_sc0004562.1_g000001 Rmu_sc0004624.1_g000011 Rmu_sc0004719.1_g000005 Rmu_sc0004751.1_g000010 Rmu_sc0004751.1_g000027 Rmu_sc0004821.1_g000006 Rmu_sc0004821.1_g000007 Rmu_sc0004876.1_g000025 Rmu_sc0004932.1_g000019 Rmu_sc0005014.1_g000016 Rmu_sc0005038.1_g000008 Rmu_sc0005065.1_g000048 Rmu_sc0005132.1_g000021 Rmu_sc0005137.1_g000037 Rmu_sc0005173.1_g000009 Rmu_sc0005237.1_g000010 Rmu_sc0005237.1_g000011 Rmu_sc0005257.1_g000018 Rmu_sc0005292.1_g000017 Rmu_sc0005294.1_g000030 Rmu_sc0005314.1_g000020 Rmu_sc0005333.1_g000001 Rmu_sc0005378.1_g000031 Rmu_sc0005389.1_g000014 Rmu_sc0005394.1_g000002 Rmu_sc0005442.1_g000006 Rmu_sc0005514.1_g000023 Rmu_sc0005629.1_g000010 Rmu_sc0005693.1_g000012 Rmu_sc0005711.1_g000001 Rmu_sc0005716.1_g000006 Rmu_sc0005725.1_g000014 Rmu_sc0005748.1_g000015 Rmu_sc0005748.1_g000016 Rmu_sc0005762.1_g000010 Rmu_sc0005781.1_g000007 Rmu_sc0005781.1_g000008 Rmu_sc0005781.1_g000009 Rmu_sc0005802.1_g000002 Rmu_sc0005806.1_g000003 Rmu_sc0005834.1_g000017 Rmu_sc0005878.1_g000016 Rmu_sc0005913.1_g000002 Rmu_sc0005939.1_g000002 Rmu_sc0005950.1_g000015 Rmu_sc0005958.1_g000005 Rmu_sc0005958.1_g000006 Rmu_sc0005971.1_g000002 Rmu_sc0006009.1_g000003 Rmu_sc0006044.1_g000010 Rmu_sc0006044.1_g000011 Rmu_sc0006123.1_g000010 Rmu_sc0006138.1_g000009 Rmu_sc0006168.1_g000028 Rmu_sc0006173.1_g000032 Rmu_sc0006175.1_g000013 Rmu_sc0006175.1_g000014 Rmu_sc0006268.1_g000003 Rmu_sc0006273.1_g000015 Rmu_sc0006320.1_g000010 Rmu_sc0006323.1_g000003 Rmu_sc0006399.1_g000009 Rmu_sc0006417.1_g000007 Rmu_sc0006435.1_g000008 Rmu_sc0006499.1_g000008 Rmu_sc0006499.1_g000009 Rmu_sc0006556.1_g000012 Rmu_sc0006616.1_g000005 Rmu_sc0006621.1_g000010 Rmu_sc0006621.1_g000011 Rmu_sc0006632.1_g000009 Rmu_sc0006653.1_g000015 Rmu_sc0006653.1_g000016 Rmu_sc0006723.1_g000004 Rmu_sc0006824.1_g000024 Rmu_sc0006833.1_g000006 Rmu_sc0006833.1_g000007 Rmu_sc0006875.1_g000003 Rmu_sc0007017.1_g000007 Rmu_sc0007095.1_g000001 Rmu_sc0007239.1_g000010 Rmu_sc0007264.1_g000008 Rmu_sc0007264.1_g000010 Rmu_sc0007319.1_g000002 Rmu_sc0007333.1_g000013 Rmu_sc0007468.1_g000001 Rmu_sc0007486.1_g000003 Rmu_sc0007618.1_g000012 Rmu_sc0007664.1_g000003 Rmu_sc0007664.1_g000004 Rmu_sc0007782.1_g000007 Rmu_sc0007985.1_g000004 Rmu_sc0007985.1_g000005 Rmu_sc0008009.1_g000002 Rmu_sc0008223.1_g000012 Rmu_sc0008260.1_g000001 Rmu_sc0008260.1_g000002 Rmu_sc0008290.1_g000001 Rmu_sc0008325.1_g000015 Rmu_sc0008325.1_g000016 Rmu_sc0008441.1_g000014 Rmu_sc0008441.1_g000015 Rmu_sc0008528.1_g000010 Rmu_sc0008600.1_g000025 Rmu_sc0008622.1_g000010 Rmu_sc0008629.1_g000010 Rmu_sc0008652.1_g000003 Rmu_sc0008720.1_g000001 Rmu_sc0008916.1_g000006 Rmu_sc0008916.1_g000007 Rmu_sc0008922.1_g000002 Rmu_sc0009149.1_g000001 Rmu_sc0009149.1_g000002 Rmu_sc0009208.1_g000027 Rmu_sc0009240.1_g000036 Rmu_sc0009240.1_g000037 Rmu_sc0009414.1_g000004 Rmu_sc0009414.1_g000005 Rmu_sc0009414.1_g000006 Rmu_sc0009920.1_g000002 Rmu_sc0009945.1_g000002 Rmu_sc0010071.1_g000003 Rmu_sc0010338.1_g000003 Rmu_sc0010384.1_g000002 Rmu_sc0010384.1_g000003 Rmu_sc0010460.1_g000001 Rmu_sc0010460.1_g000002 Rmu_sc0010476.1_g000001 Rmu_sc0010525.1_g000002 Rmu_sc0010621.1_g000002 Rmu_sc0010650.1_g000001 Rmu_sc0010668.1_g000001 Rmu_sc0010856.1_g000003 Rmu_sc0010914.1_g000011 Rmu_sc0010914.1_g000012 Rmu_sc0010963.1_g000010 Rmu_sc0011010.1_g000001 Rmu_sc0011010.1_g000003 Rmu_sc0011036.1_g000001 Rmu_sc0011218.1_g000007 Rmu_sc0011280.1_g000007 Rmu_sc0011576.1_g000001 Rmu_sc0011576.1_g000002 Rmu_sc0011648.1_g000002 Rmu_sc0011648.1_g000003 Rmu_sc0011778.1_g000002 Rmu_sc0011778.1_g000007 Rmu_sc0011844.1_g000001 Rmu_sc0012503.1_g000005 Rmu_sc0012746.1_g000043 Rmu_sc0012746.1_g000044 Rmu_sc0013113.1_g000003 Rmu_sc0013160.1_g000008 Rmu_sc0013160.1_g000009 Rmu_sc0013257.1_g000009 Rmu_sc0013257.1_g000010 Rmu_sc0013430.1_g000001 Rmu_sc0013503.1_g000001 Rmu_sc0013558.1_g000008 Rmu_sc0013959.1_g000002 Rmu_sc0014204.1_g000004 Rmu_sc0014406.1_g000004 Rmu_sc0014417.1_g000004 Rmu_sc0014417.1_g000005 Rmu_sc0014478.1_g000002 Rmu_sc0014762.1_g000005 Rmu_sc0014846.1_g000006 Rmu_sc0015188.1_g000002 Rmu_sc0015188.1_g000003 Rmu_sc0015304.1_g000005 Rmu_sc0015304.1_g000006 Rmu_sc0015756.1_g000001 Rmu_sc0016149.1_g000008 Rmu_sc0016149.1_g000009 Rmu_sc0016694.1_g000002 Rmu_sc0016694.1_g000003 Rmu_sc0016694.1_g000004 Rmu_sc0016800.1_g000001 Rmu_sc0017928.1_g000002 Rmu_sc0018113.1_g000001 Rmu_sc0018284.1_g000001 Rmu_sc0019033.1_g000001 Rmu_sc0019072.1_g000001 Rmu_sc0019133.1_g000002 Rmu_sc0019133.1_g000003 Rmu_sc0019971.1_g000001 Rmu_sc0020305.1_g000002 Rmu_sc0021207.1_g000005 Rmu_sc0021485.1_g000001 Rmu_sc0021485.1_g000002 Rmu_sc0021663.1_g000001 Rmu_sc0023685.1_g000003 Rmu_sc0023989.1_g000004 Rmu_sc0024030.1_g000005 Rmu_sc0024049.1_g000001 Rmu_sc0024503.1_g000002 Rmu_sc0025086.1_g000001 Rmu_sc0025770.1_g000002 Rmu_sc0027362.1_g000001 Rmu_sc0027605.1_g000001 Rmu_sc0029364.1_g000001 Rmu_sc0029664.1_g000002 Rmu_sc0029686.1_g000001 Rmu_sc0029927.1_g000001 Rmu_sc0032648.1_g000001 Rmu_sc0034541.1_g000001 Rmu_sc0035189.1_g000001 Rmu_sc0035224.1_g000001 Rmu_sc0035224.1_g000002 Rmu_sc0035231.1_g000001 Rmu_sc0035860.1_g000001 Rmu_sc0036358.1_g000002 Rmu_sc0038525.1_g000001 Rmu_sc0038544.1_g000001 Rmu_sc0041072.1_g000002 Rmu_sc0042830.1_g000001 Rmu_ssc0000007.1_g000035 Rmu_ssc0000027.1_g000005 Rmu_ssc0000050.1_g000056 Rmu_ssc0000050.1_g000072 Rmu_ssc0000084.1_g000005 Rmu_ssc0000110.1_g000007 Rmu_ssc0000124.1_g000004 Rmu_ssc0000182.1_g000009 Rmu_ssc0000189.1_g000036 Rmu_ssc0000201.1_g000017 Rmu_ssc0000201.1_g000018 Rmu_ssc0000204.1_g000007 Rmu_ssc0000228.1_g000004 Rmu_ssc0000240.1_g000020 Rmu_ssc0000240.1_g000021 Rmu_ssc0000263.1_g000013 Rmu_ssc0000263.1_g000014 Rmu_ssc0000267.1_g000008 Rmu_ssc0000299.1_g000015 Rmu_ssc0000330.1_g000007 Rmu_ssc0000330.1_g000008 Rmu_ssc0000359.1_g000006 Rmu_ssc0000386.1_g000054 Rmu_ssc0000387.1_g000005 Rmu_ssc0000393.1_g000038 Rmu_ssc0000400.1_g000066 Rmu_ssc0000440.1_g000004 Rmu_ssc0000452.1_g000015
rosa_roxburghii Rroxscaffold_1G00033670 Rroxscaffold_1G00037880 Rroxscaffold_2G00098140 Rroxscaffold_2G00146520 Rroxscaffold_4G00292850 Rroxscaffold_4G00306770 Rroxscaffold_4G00331150 Rroxscaffold_5G00349760 Rroxscaffold_5G00377350 Rroxscaffold_5G00383090 Rroxscaffold_6G00389500 Rroxscaffold_6G00398610 Rroxscaffold_6G00412390 Rroxscaffold_7G00158890 Rroxscaffold_7G00206210 Rroxscaffold_7G00206610
rosa_rugosa Rorug01G0000400.1 Rorug01G0000500.1 Rorug02G0281100 Rorug02G0281100 Rorug04G0186000 Rorug04G0202000 Rorug05G0583800 Rorug06G0013000 Rorug06G0071600 Rorug07G0162700 Rorug07G0162700 Rorug07G0217800 Rorug07G0301000
rosa_samantha Rh1AG222900 Rh1BG189100 Rh1CG224600 Rh2BG234100 Rh2CG180600 Rh3DG267500 Rh4BG361000 Rh4CG375300 Rh4DG114300 Rh5AG464200 Rh6AG153800 Rh6CG149600
rosa_wichuraiana Rw0G004880 Rw0G008820 Rw0G009090 Rw1G002400 Rw1G002630 Rw1G008990 Rw1G015700 Rw1G015940 Rw1G019460 Rw1G020990 Rw1G021190 Rw2G002630 Rw2G022330 Rw2G023900 Rw2G035810 Rw2G037340 Rw2G039650 Rw3G024690 Rw3G025990 Rw4G002910 Rw4G007470 Rw4G010560 Rw4G011420 Rw4G012580 Rw4G018330 Rw4G033340 Rw5G001180 Rw5G013720 Rw5G014150 Rw5G016490 Rw5G027140 Rw5G038840 Rw5G039640 Rw6G011960 Rw6G033090 Rw6G036170 Rw6G041420 Rw6G043630 Rw7G025610 Rw7G039650

Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 494, 1040
Acc65I GGTACC 2 cut(s) 1239, 1268
AccB1I GGYRCC 2 cut(s) 1239, 1268
AccII CGCG 2 cut(s) 417, 801
AccIII TCCGGA 1 cut(s) 643
AciI CCGC 4 cut(s) 417, 521, 799, 1077
AclWI GGATC 3 cut(s) 220, 272, 943
AcoI YGGCCR 3 cut(s) 354, 483, 503
AcsI RAATTY 1 cut(s) 314
AcuI CTGAAG 3 cut(s) 25, 107, 734
AfaI GTAC 4 cut(s) 683, 1136, 1241, 1270
AfiI CCNNNNNNNGG 1 cut(s) 996
AflIII ACRYGT 1 cut(s) 533
AgsI TTSAA 7 cut(s) 122, 155, 233, 242, 514, 608, 1180
AjnI CCWGG 5 cut(s) 859, 963, 989, 1018, 1264
AluBI AGCT 8 cut(s) 8, 37, 91, 293, 662, 842, 1072, 1121
AluI AGCT 8 cut(s) 8, 37, 91, 293, 662, 842, 1072, 1121
Alw21I GWGCWC 4 cut(s) 195, 439, 1090, 1123
Alw26I GTCTC 2 cut(s) 554, 1059
Alw44I GTGCAC 2 cut(s) 191, 435
AlwI GGATC 3 cut(s) 220, 272, 943
AlwNI CAGNNNCTG 1 cut(s) 212
Aor13HI TCCGGA 1 cut(s) 643
AoxI GGCC 3 cut(s) 354, 483, 503
ApaLI GTGCAC 2 cut(s) 191, 435
ApeKI GCWGC 6 cut(s) 293, 296, 377, 662, 743, 812
ApoI RAATTY 1 cut(s) 314
Asp718I GGTACC 2 cut(s) 1239, 1268
AspLEI GCGC 2 cut(s) 417, 803
AsuC2I CCSGG 1 cut(s) 429
AsuII TTCGAA 1 cut(s) 1189
BaeGI GKGCMC 3 cut(s) 85, 195, 439
BalI TGGCCA 1 cut(s) 356
BanI GGYRCC 2 cut(s) 1239, 1268
BanII GRGCYC 1 cut(s) 1123
BauI CACGAG 1 cut(s) 762
BbsI GAAGAC 1 cut(s) 468
Bbv12I GWGCWC 4 cut(s) 195, 439, 1090, 1123
BbvI GCAGC 6 cut(s) 280, 283, 364, 649, 755, 824
BccI CCATC 4 cut(s) 122, 346, 715, 1158
BceAI ACGGC 1 cut(s) 42
BcgI CGANNNNNNTGC 2 cut(s) 275, 309
BciT130I CCWGG 5 cut(s) 861, 965, 991, 1020, 1266
BclI TGATCA 1 cut(s) 1249
BcnI CCSGG 1 cut(s) 429
BcoDI GTCTC 2 cut(s) 554, 1059
BfaI CTAG 2 cut(s) 54, 1130
BfmI CTRYAG 2 cut(s) 378, 810
BglII AGATCT 1 cut(s) 124
BisI GCNGC 6 cut(s) 294, 297, 378, 663, 744, 813
BlsI GCNGC 6 cut(s) 295, 298, 379, 664, 745, 814
Bme1390I CCNGG 6 cut(s) 429, 861, 965, 991, 1020, 1266
BmiI GGNNCC 3 cut(s) 180, 1241, 1270
BmrFI CCNGG 6 cut(s) 429, 861, 965, 991, 1020, 1266
BmsI GCATC 4 cut(s) 508, 607, 885, 986
BpiI GAAGAC 1 cut(s) 468
BpmI CTGGAG 1 cut(s) 945
Bpu14I TTCGAA 1 cut(s) 1189
BpuEI CTTGAG 2 cut(s) 372, 1215
BpuMI CCSGG 1 cut(s) 429
BsaJI CCNNGG 3 cut(s) 409, 1019, 1206
BsaWI WCCGGW 2 cut(s) 643, 1280
Bsc4I CCNNNNNNNGG 1 cut(s) 996
Bse118I RCCGGY 1 cut(s) 1079
Bse1I ACTGG 4 cut(s) 182, 506, 586, 628
Bse3DI GCAATG 1 cut(s) 902
BseAI TCCGGA 1 cut(s) 643
BseBI CCWGG 5 cut(s) 861, 965, 991, 1020, 1266
BseDI CCNNGG 3 cut(s) 409, 1019, 1206
BseGI GGATG 6 cut(s) 337, 343, 424, 549, 726, 960
BseLI CCNNNNNNNGG 1 cut(s) 996
BseMI GCAATG 1 cut(s) 902
BseMII CTCAG 3 cut(s) 699, 834, 835
BseNI ACTGG 4 cut(s) 182, 506, 586, 628
BseRI GAGGAG 1 cut(s) 862
BseSI GKGCMC 3 cut(s) 85, 195, 439
BseXI GCAGC 6 cut(s) 280, 283, 364, 649, 755, 824
BsgI GTGCAG 2 cut(s) 282, 708
Bsh1236I CGCG 2 cut(s) 417, 801
Bsh1285I CGRYCG 1 cut(s) 502
BshFI GGCC 3 cut(s) 356, 485, 505
BshNI GGYRCC 2 cut(s) 1239, 1268
BsiEI CGRYCG 1 cut(s) 502
BsiHKAI GWGCWC 4 cut(s) 195, 439, 1090, 1123
BsiSI CCGG 4 cut(s) 428, 644, 1080, 1281
BsiWI CGTACG 1 cut(s) 681
BslI CCNNNNNNNGG 1 cut(s) 996
BsmAI GTCTC 2 cut(s) 554, 1059
BsmI GAATGC 2 cut(s) 678, 1004
BsnI GGCC 3 cut(s) 356, 485, 505
Bsp119I TTCGAA 1 cut(s) 1189
Bsp1286I GDGCHC 5 cut(s) 85, 195, 439, 1090, 1123
Bsp13I TCCGGA 1 cut(s) 643
Bsp143I GATC 9 cut(s) 124, 225, 277, 499, 592, 697, 775, 948, 1249
BspACI CCGC 4 cut(s) 417, 521, 799, 1077
BspANI GGCC 3 cut(s) 356, 485, 505
BspCNI CTCAG 3 cut(s) 700, 834, 835
BspEI TCCGGA 1 cut(s) 643
BspFNI CGCG 2 cut(s) 417, 801
BspLI GGNNCC 3 cut(s) 180, 1241, 1270
BspMAI CTGCAG 2 cut(s) 382, 814
BspPI GGATC 3 cut(s) 220, 272, 943
BspQI GCTCTTC 1 cut(s) 44
BspT104I TTCGAA 1 cut(s) 1189
BspT107I GGYRCC 2 cut(s) 1239, 1268
BsrDI GCAATG 1 cut(s) 902
BsrFI RCCGGY 1 cut(s) 1079
BsrI ACTGG 4 cut(s) 182, 506, 586, 628
BssAI RCCGGY 1 cut(s) 1079
BssECI CCNNGG 3 cut(s) 409, 1019, 1206
BssMI GATC 9 cut(s) 124, 225, 277, 499, 592, 697, 775, 948, 1249
BssSI CACGAG 1 cut(s) 762
BssT1I CCWWGG 1 cut(s) 1206
Bst2BI CACGAG 1 cut(s) 762
Bst2UI CCWGG 5 cut(s) 861, 965, 991, 1020, 1266
Bst4CI ACNGT 4 cut(s) 686, 884, 1151, 1186
Bst6I CTCTTC 3 cut(s) 44, 339, 563
BstBI TTCGAA 1 cut(s) 1189
BstC8I GCNNGC 4 cut(s) 301, 678, 1002, 1027
BstDEI CTNAG 3 cut(s) 708, 821, 843
BstF5I GGATG 6 cut(s) 337, 343, 424, 549, 726, 960
BstFNI CGCG 2 cut(s) 417, 801
BstHHI GCGC 2 cut(s) 417, 803
BstKTI GATC 9 cut(s) 127, 228, 280, 502, 595, 700, 778, 951, 1252
BstMAI GTCTC 2 cut(s) 554, 1059
BstMBI GATC 9 cut(s) 124, 225, 277, 499, 592, 697, 775, 948, 1249
BstMCI CGRYCG 1 cut(s) 502
BstMWI GCNNNNNNNGC 6 cut(s) 362, 383, 646, 686, 809, 1085
BstNI CCWGG 5 cut(s) 861, 965, 991, 1020, 1266
BstNSI RCATGY 1 cut(s) 1029
BstSCI CCNGG 6 cut(s) 427, 859, 963, 989, 1018, 1264
BstSFI CTRYAG 2 cut(s) 378, 810
BstSLI GKGCMC 3 cut(s) 85, 195, 439
BstUI CGCG 2 cut(s) 417, 801
BstV1I GCAGC 6 cut(s) 280, 283, 364, 649, 755, 824
BstV2I GAAGAC 1 cut(s) 468
BstX2I RGATCY 3 cut(s) 124, 277, 948
BstXI CCANNNNNNTGG 2 cut(s) 22, 373
BstYI RGATCY 3 cut(s) 124, 277, 948
BsuRI GGCC 3 cut(s) 356, 485, 505
BtsCI GGATG 6 cut(s) 337, 343, 424, 549, 726, 960
BtsIMutI CAGTG 3 cut(s) 83, 189, 513
Cac8I GCNNGC 4 cut(s) 301, 678, 1002, 1027
CaiI CAGNNNCTG 1 cut(s) 212
CfoI GCGC 2 cut(s) 417, 803
Cfr10I RCCGGY 1 cut(s) 1079
Csp6I GTAC 4 cut(s) 682, 1135, 1240, 1269
CspCI CAANNNNNGTGG 2 cut(s) 721, 756
CviAII CATG 4 cut(s) 48, 249, 373, 1026
CviQI GTAC 4 cut(s) 682, 1135, 1240, 1269
DdeI CTNAG 3 cut(s) 708, 821, 843
DpnI GATC 9 cut(s) 126, 227, 279, 501, 594, 699, 777, 950, 1251
DpnII GATC 9 cut(s) 124, 225, 277, 499, 592, 697, 775, 948, 1249
DraI TTTAAA 1 cut(s) 1258
DrdI GACNNNNNNGTC 2 cut(s) 494, 1040
DseDI GACNNNNNNGTC 2 cut(s) 494, 1040
EaeI YGGCCR 3 cut(s) 354, 483, 503
Eam1104I CTCTTC 3 cut(s) 44, 339, 563
EarI CTCTTC 3 cut(s) 44, 339, 563
Ecl136II GAGCTC 1 cut(s) 1121
Eco130I CCWWGG 1 cut(s) 1206
Eco24I GRGCYC 1 cut(s) 1123
Eco53kI GAGCTC 1 cut(s) 1121
Eco57I CTGAAG 3 cut(s) 25, 107, 734
EcoICRI GAGCTC 1 cut(s) 1121
EcoRII CCWGG 5 cut(s) 859, 963, 989, 1018, 1264
EcoT14I CCWWGG 1 cut(s) 1206
EcoT22I ATGCAT 1 cut(s) 891
EcoT38I GRGCYC 1 cut(s) 1123
ErhI CCWWGG 1 cut(s) 1206
FaeI CATG 4 cut(s) 51, 252, 376, 1029
FatI CATG 4 cut(s) 47, 248, 372, 1025
FbaI TGATCA 1 cut(s) 1249
Fnu4HI GCNGC 6 cut(s) 294, 297, 378, 663, 744, 813
FokI GGATG 6 cut(s) 344, 350, 411, 556, 733, 947
FriOI GRGCYC 1 cut(s) 1123
Fsp4HI GCNGC 6 cut(s) 294, 297, 378, 663, 744, 813
FspBI CTAG 2 cut(s) 54, 1130
GlaI GCGC 2 cut(s) 416, 802
GluI GCNGC 6 cut(s) 294, 297, 378, 663, 744, 813
GsuI CTGGAG 1 cut(s) 945
HaeIII GGCC 3 cut(s) 356, 485, 505
HapII CCGG 4 cut(s) 428, 644, 1080, 1281
HhaI GCGC 2 cut(s) 417, 803
Hin1II CATG 4 cut(s) 51, 252, 376, 1029
Hin6I GCGC 2 cut(s) 415, 801
HinP1I GCGC 2 cut(s) 415, 801
HincII GTYRAC 1 cut(s) 1111
HindII GTYRAC 1 cut(s) 1111
HinfI GANTC 3 cut(s) 215, 392, 547
HpaI GTTAAC 1 cut(s) 1111
HpaII CCGG 4 cut(s) 428, 644, 1080, 1281
Hpy166II GTNNAC 3 cut(s) 193, 437, 1111
Hpy188I TCNGA 8 cut(s) 44, 274, 530, 616, 635, 824, 912, 1287
Hpy188III TCNNGA 6 cut(s) 284, 389, 396, 644, 1177, 1232
Hpy8I GTNNAC 3 cut(s) 193, 437, 1111
Hpy99I CGWCG 1 cut(s) 1151
HpyAV CCTTC 2 cut(s) 169, 758
HpyCH4III ACNGT 4 cut(s) 686, 884, 1151, 1186
HpyCH4IV ACGT 2 cut(s) 535, 1041
HpyF10VI GCNNNNNNNGC 6 cut(s) 362, 383, 646, 686, 809, 1085
HpyF3I CTNAG 3 cut(s) 708, 821, 843
HpySE526I ACGT 2 cut(s) 535, 1041
Hsp92II CATG 4 cut(s) 51, 252, 376, 1029
HspAI GCGC 2 cut(s) 415, 801
Kpn2I TCCGGA 1 cut(s) 643
KpnI GGTACC 2 cut(s) 1243, 1272
Ksp22I TGATCA 1 cut(s) 1249
KspAI GTTAAC 1 cut(s) 1111
Kzo9I GATC 9 cut(s) 124, 225, 277, 499, 592, 697, 775, 948, 1249
LguI GCTCTTC 1 cut(s) 44
LmnI GCTCC 3 cut(s) 646, 808, 873
Lsp1109I GCAGC 6 cut(s) 280, 283, 364, 649, 755, 824
LweI GCATC 4 cut(s) 508, 607, 885, 986
MaeI CTAG 2 cut(s) 54, 1130
MaeII ACGT 2 cut(s) 535, 1041
MaeIII GTNAC 2 cut(s) 536, 596
MalI GATC 9 cut(s) 126, 227, 279, 501, 594, 699, 777, 950, 1251
MboI GATC 9 cut(s) 124, 225, 277, 499, 592, 697, 775, 948, 1249
MflI RGATCY 3 cut(s) 124, 277, 948
MhlI GDGCHC 5 cut(s) 85, 195, 439, 1090, 1123
MlsI TGGCCA 1 cut(s) 356
MluCI AATT 4 cut(s) 314, 768, 904, 1100
MluNI TGGCCA 1 cut(s) 356
MlyI GAGTC 1 cut(s) 556
MmeI TCCRAC 3 cut(s) 613, 830, 935
Mox20I TGGCCA 1 cut(s) 356
Mph1103I ATGCAT 1 cut(s) 891
MroI TCCGGA 1 cut(s) 643
MscI TGGCCA 1 cut(s) 356
MseI TTAA 3 cut(s) 318, 1110, 1257
MslI CAYNNNNRTG 1 cut(s) 371
Msp20I TGGCCA 1 cut(s) 356
MspA1I CMGCKG 1 cut(s) 662
MspI CCGG 4 cut(s) 428, 644, 1080, 1281
MspR9I CCNGG 6 cut(s) 429, 861, 965, 991, 1020, 1266
Mva1269I GAATGC 2 cut(s) 678, 1004
MvaI CCWGG 5 cut(s) 861, 965, 991, 1020, 1266
MvnI CGCG 2 cut(s) 417, 801
MwoI GCNNNNNNNGC 6 cut(s) 362, 383, 646, 686, 809, 1085
NciI CCSGG 1 cut(s) 429
NdeII GATC 9 cut(s) 124, 225, 277, 499, 592, 697, 775, 948, 1249
NlaIII CATG 4 cut(s) 51, 252, 376, 1029
NlaIV GGNNCC 3 cut(s) 180, 1241, 1270
NsiI ATGCAT 1 cut(s) 891
NspI RCATGY 1 cut(s) 1029
NspV TTCGAA 1 cut(s) 1189
PaeI GCATGC 1 cut(s) 1029
PciSI GCTCTTC 1 cut(s) 44
PcsI WCGNNNNNNNCGW 2 cut(s) 981, 1038
PctI GAATGC 2 cut(s) 678, 1004
PfeI GAWTC 2 cut(s) 215, 392
Pfl23II CGTACG 1 cut(s) 681
PfoI TCCNGGA 2 cut(s) 859, 963
PkrI GCNGC 6 cut(s) 295, 298, 379, 664, 745, 814
Ple19I CGATCG 1 cut(s) 502
PleI GAGTC 1 cut(s) 555
PpsI GAGTC 1 cut(s) 555
Psp124BI GAGCTC 1 cut(s) 1123
Psp6I CCWGG 5 cut(s) 859, 963, 989, 1018, 1264
PspGI CCWGG 5 cut(s) 859, 963, 989, 1018, 1264
PspLI CGTACG 1 cut(s) 681
PspN4I GGNNCC 3 cut(s) 180, 1241, 1270
PstI CTGCAG 2 cut(s) 382, 814
PstNI CAGNNNCTG 1 cut(s) 212
PsuI RGATCY 3 cut(s) 124, 277, 948
PvuI CGATCG 1 cut(s) 502
PvuII CAGCTG 1 cut(s) 662
RsaI GTAC 4 cut(s) 683, 1136, 1241, 1270
RsaNI GTAC 4 cut(s) 682, 1135, 1240, 1269
RseI CAYNNNNRTG 1 cut(s) 371
SacI GAGCTC 1 cut(s) 1123
SapI GCTCTTC 1 cut(s) 44
SaqAI TTAA 3 cut(s) 318, 1110, 1257
SatI GCNGC 6 cut(s) 294, 297, 378, 663, 744, 813
Sau3AI GATC 9 cut(s) 124, 225, 277, 499, 592, 697, 775, 948, 1249
SchI GAGTC 1 cut(s) 556
ScrFI CCNGG 6 cut(s) 429, 861, 965, 991, 1020, 1266
SduI GDGCHC 5 cut(s) 85, 195, 439, 1090, 1123
SfaNI GCATC 4 cut(s) 508, 607, 885, 986
SfcI CTRYAG 2 cut(s) 378, 810
SfuI TTCGAA 1 cut(s) 1189
SmiMI CAYNNNNRTG 1 cut(s) 371
SmlI CTYRAG 2 cut(s) 387, 1230
SmoI CTYRAG 2 cut(s) 387, 1230
SphI GCATGC 1 cut(s) 1029
Sse9I AATT 4 cut(s) 314, 768, 904, 1100
SsiI CCGC 4 cut(s) 417, 521, 799, 1077
SspMI CTAG 2 cut(s) 54, 1130
SstI GAGCTC 1 cut(s) 1123
StyD4I CCNGG 6 cut(s) 427, 859, 963, 989, 1018, 1264
StyI CCWWGG 1 cut(s) 1206
TaaI ACNGT 4 cut(s) 686, 884, 1151, 1186
TaiI ACGT 2 cut(s) 538, 1044
TaqI TCGA 5 cut(s) 498, 879, 1162, 1189, 1215
TasI AATT 4 cut(s) 314, 768, 904, 1100
TfiI GAWTC 2 cut(s) 215, 392
Tru1I TTAA 3 cut(s) 318, 1110, 1257
Tru9I TTAA 3 cut(s) 318, 1110, 1257
TscAI CASTG 3 cut(s) 90, 189, 513
TseI GCWGC 6 cut(s) 293, 296, 377, 662, 743, 812
TspDTI ATGAA 3 cut(s) 158, 339, 357
TspGWI ACGGA 1 cut(s) 727
TspRI CASTG 3 cut(s) 90, 189, 513
VneI GTGCAC 2 cut(s) 191, 435
XapI RAATTY 1 cut(s) 314
XceI RCATGY 1 cut(s) 1029
XcmI CCANNNNNNNNNTGG 1 cut(s) 961
XspI CTAG 2 cut(s) 54, 1130
Zsp2I ATGCAT 1 cut(s) 891
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.