Ribosomal protein-like protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 410 |
| AccB1I | GGYRCC | 1 cut(s) | 556 |
| AccI | GTMKAC | 1 cut(s) | 254 |
| AciI | CCGC | 2 cut(s) | 283, 439 |
| AclWI | GGATC | 2 cut(s) | 92, 105 |
| AcoI | YGGCCR | 1 cut(s) | 595 |
| AcyI | GRCGYC | 1 cut(s) | 557 |
| AfaI | GTAC | 4 cut(s) | 152, 212, 513, 572 |
| AgsI | TTSAA | 1 cut(s) | 535 |
| AjnI | CCWGG | 3 cut(s) | 61, 126, 487 |
| AluBI | AGCT | 5 cut(s) | 78, 268, 338, 350, 374 |
| AluI | AGCT | 5 cut(s) | 78, 268, 338, 350, 374 |
| Alw26I | GTCTC | 1 cut(s) | 528 |
| AlwI | GGATC | 2 cut(s) | 92, 105 |
| Ama87I | CYCGRG | 1 cut(s) | 561 |
| AoxI | GGCC | 1 cut(s) | 595 |
| ApeKI | GCWGC | 2 cut(s) | 75, 374 |
| AspLEI | GCGC | 1 cut(s) | 559 |
| AspS9I | GGNCC | 1 cut(s) | 310 |
| AsuHPI | GGTGA | 3 cut(s) | 77, 563, 593 |
| AvaI | CYCGRG | 1 cut(s) | 561 |
| AvaII | GGWCC | 1 cut(s) | 310 |
| BaeGI | GKGCMC | 1 cut(s) | 398 |
| BalI | TGGCCA | 1 cut(s) | 597 |
| BamHI | GGATCC | 1 cut(s) | 97 |
| BanI | GGYRCC | 1 cut(s) | 556 |
| BanII | GRGCYC | 1 cut(s) | 62 |
| BbvI | GCAGC | 2 cut(s) | 87, 361 |
| BciT130I | CCWGG | 3 cut(s) | 63, 128, 489 |
| BcoDI | GTCTC | 1 cut(s) | 528 |
| BfaI | CTAG | 2 cut(s) | 329, 611 |
| BfmI | CTRYAG | 1 cut(s) | 345 |
| BfoI | RGCGCY | 1 cut(s) | 560 |
| BglII | AGATCT | 2 cut(s) | 357, 621 |
| BisI | GCNGC | 2 cut(s) | 76, 375 |
| BlsI | GCNGC | 2 cut(s) | 77, 376 |
| Bme1390I | CCNGG | 3 cut(s) | 63, 128, 489 |
| Bme18I | GGWCC | 1 cut(s) | 310 |
| BmeT110I | CYCGRG | 1 cut(s) | 561 |
| BmgT120I | GGNCC | 1 cut(s) | 310 |
| BmiI | GGNNCC | 4 cut(s) | 99, 125, 493, 558 |
| BmrFI | CCNGG | 3 cut(s) | 63, 128, 489 |
| BmsI | GCATC | 7 cut(s) | 7, 58, 174, 220, 276, 444, 454 |
| BpmI | CTGGAG | 1 cut(s) | 454 |
| BpuEI | CTTGAG | 1 cut(s) | 113 |
| BsaHI | GRCGYC | 1 cut(s) | 557 |
| BsaJI | CCNNGG | 2 cut(s) | 61, 127 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 347, 377 |
| Bse1I | ACTGG | 2 cut(s) | 408, 598 |
| BseBI | CCWGG | 3 cut(s) | 63, 128, 489 |
| BseDI | CCNNGG | 2 cut(s) | 61, 127 |
| BseGI | GGATG | 1 cut(s) | 291 |
| BseNI | ACTGG | 2 cut(s) | 408, 598 |
| BseSI | GKGCMC | 1 cut(s) | 398 |
| BseXI | GCAGC | 2 cut(s) | 87, 361 |
| Bsh1285I | CGRYCG | 1 cut(s) | 443 |
| BshFI | GGCC | 1 cut(s) | 597 |
| BshNI | GGYRCC | 1 cut(s) | 556 |
| BsiEI | CGRYCG | 1 cut(s) | 443 |
| BsiHKCI | CYCGRG | 1 cut(s) | 561 |
| BsiSI | CCGG | 1 cut(s) | 237 |
| BsmAI | GTCTC | 1 cut(s) | 528 |
| BsmI | GAATGC | 1 cut(s) | 162 |
| BsnI | GGCC | 1 cut(s) | 597 |
| BsoBI | CYCGRG | 1 cut(s) | 561 |
| Bsp1286I | GDGCHC | 2 cut(s) | 62, 398 |
| Bsp143I | GATC | 5 cut(s) | 97, 205, 357, 425, 621 |
| BspACI | CCGC | 2 cut(s) | 283, 439 |
| BspANI | GGCC | 1 cut(s) | 597 |
| BspLI | GGNNCC | 4 cut(s) | 99, 125, 493, 558 |
| BspPI | GGATC | 2 cut(s) | 92, 105 |
| BspT107I | GGYRCC | 1 cut(s) | 556 |
| BsrI | ACTGG | 2 cut(s) | 408, 598 |
| BssECI | CCNNGG | 2 cut(s) | 61, 127 |
| BssMI | GATC | 5 cut(s) | 97, 205, 357, 425, 621 |
| BssNI | GRCGYC | 1 cut(s) | 557 |
| Bst2UI | CCWGG | 3 cut(s) | 63, 128, 489 |
| Bst4CI | ACNGT | 1 cut(s) | 118 |
| BstACI | GRCGYC | 1 cut(s) | 557 |
| BstC8I | GCNNGC | 2 cut(s) | 73, 470 |
| BstDEI | CTNAG | 1 cut(s) | 515 |
| BstF5I | GGATG | 1 cut(s) | 291 |
| BstH2I | RGCGCY | 1 cut(s) | 560 |
| BstHHI | GCGC | 1 cut(s) | 559 |
| BstKTI | GATC | 5 cut(s) | 100, 208, 360, 428, 624 |
| BstMAI | GTCTC | 1 cut(s) | 528 |
| BstMBI | GATC | 5 cut(s) | 97, 205, 357, 425, 621 |
| BstMCI | CGRYCG | 1 cut(s) | 443 |
| BstNI | CCWGG | 3 cut(s) | 63, 128, 489 |
| BstNSI | RCATGY | 2 cut(s) | 36, 472 |
| BstSCI | CCNGG | 3 cut(s) | 61, 126, 487 |
| BstSFI | CTRYAG | 1 cut(s) | 345 |
| BstSLI | GKGCMC | 1 cut(s) | 398 |
| BstV1I | GCAGC | 2 cut(s) | 87, 361 |
| BstX2I | RGATCY | 3 cut(s) | 97, 357, 621 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 386 |
| BstYI | RGATCY | 3 cut(s) | 97, 357, 621 |
| BsuRI | GGCC | 1 cut(s) | 597 |
| BtgZI | GCGATG | 1 cut(s) | 147 |
| BtsCI | GGATG | 1 cut(s) | 291 |
| BtsIMutI | CAGTG | 3 cut(s) | 123, 401, 605 |
| Cac8I | GCNNGC | 2 cut(s) | 73, 470 |
| CfoI | GCGC | 1 cut(s) | 559 |
| Cfr13I | GGNCC | 1 cut(s) | 310 |
| Csp6I | GTAC | 4 cut(s) | 151, 211, 512, 571 |
| CviAII | CATG | 6 cut(s) | 33, 167, 386, 469, 575, 593 |
| CviJI | RGCY | 8 cut(s) | 60, 78, 268, 301, 338, 350, 374, 597 |
| CviKI_1 | RGCY | 8 cut(s) | 60, 78, 268, 301, 338, 350, 374, 597 |
| CviQI | GTAC | 4 cut(s) | 151, 211, 512, 571 |
| DdeI | CTNAG | 1 cut(s) | 515 |
| DinI | GGCGCC | 1 cut(s) | 558 |
| DpnI | GATC | 5 cut(s) | 99, 207, 359, 427, 623 |
| DpnII | GATC | 5 cut(s) | 97, 205, 357, 425, 621 |
| EaeI | YGGCCR | 1 cut(s) | 595 |
| Eco24I | GRGCYC | 1 cut(s) | 62 |
| Eco32I | GATATC | 1 cut(s) | 505 |
| Eco47I | GGWCC | 1 cut(s) | 310 |
| Eco88I | CYCGRG | 1 cut(s) | 561 |
| EcoRII | CCWGG | 3 cut(s) | 61, 126, 487 |
| EcoRV | GATATC | 1 cut(s) | 505 |
| EcoT22I | ATGCAT | 1 cut(s) | 189 |
| EcoT38I | GRGCYC | 1 cut(s) | 62 |
| EgeI | GGCGCC | 1 cut(s) | 558 |
| EheI | GGCGCC | 1 cut(s) | 558 |
| FaeI | CATG | 6 cut(s) | 36, 170, 389, 472, 578, 596 |
| FatI | CATG | 6 cut(s) | 32, 166, 385, 468, 574, 592 |
| FblI | GTMKAC | 1 cut(s) | 254 |
| Fnu4HI | GCNGC | 2 cut(s) | 76, 375 |
| FokI | GGATG | 1 cut(s) | 298 |
| FriOI | GRGCYC | 1 cut(s) | 62 |
| Fsp4HI | GCNGC | 2 cut(s) | 76, 375 |
| FspBI | CTAG | 2 cut(s) | 329, 611 |
| GlaI | GCGC | 1 cut(s) | 558 |
| GluI | GCNGC | 2 cut(s) | 76, 375 |
| GsuI | CTGGAG | 1 cut(s) | 454 |
| HaeII | RGCGCY | 1 cut(s) | 560 |
| HaeIII | GGCC | 1 cut(s) | 597 |
| HapII | CCGG | 1 cut(s) | 237 |
| HhaI | GCGC | 1 cut(s) | 559 |
| Hin1I | GRCGYC | 1 cut(s) | 557 |
| Hin1II | CATG | 6 cut(s) | 36, 170, 389, 472, 578, 596 |
| Hin6I | GCGC | 1 cut(s) | 557 |
| HinP1I | GCGC | 1 cut(s) | 557 |
| HinfI | GANTC | 2 cut(s) | 111, 341 |
| HpaII | CCGG | 1 cut(s) | 237 |
| HphI | GGTGA | 3 cut(s) | 77, 563, 593 |
| Hpy166II | GTNNAC | 1 cut(s) | 255 |
| Hpy188I | TCNGA | 3 cut(s) | 6, 306, 482 |
| Hpy188III | TCNNGA | 3 cut(s) | 92, 329, 433 |
| Hpy8I | GTNNAC | 1 cut(s) | 255 |
| Hpy99I | CGWCG | 1 cut(s) | 310 |
| HpyAV | CCTTC | 1 cut(s) | 141 |
| HpyCH4III | ACNGT | 1 cut(s) | 118 |
| HpyCH4IV | ACGT | 1 cut(s) | 333 |
| HpyCH4V | TGCA | 5 cut(s) | 20, 71, 187, 220, 546 |
| HpyF3I | CTNAG | 1 cut(s) | 515 |
| HpySE526I | ACGT | 1 cut(s) | 333 |
| Hsp92I | GRCGYC | 1 cut(s) | 557 |
| Hsp92II | CATG | 6 cut(s) | 36, 170, 389, 472, 578, 596 |
| HspAI | GCGC | 1 cut(s) | 557 |
| KasI | GGCGCC | 1 cut(s) | 556 |
| Kzo9I | GATC | 5 cut(s) | 97, 205, 357, 425, 621 |
| Lsp1109I | GCAGC | 2 cut(s) | 87, 361 |
| LweI | GCATC | 7 cut(s) | 7, 58, 174, 220, 276, 444, 454 |
| MaeI | CTAG | 2 cut(s) | 329, 611 |
| MaeII | ACGT | 1 cut(s) | 333 |
| MaeIII | GTNAC | 1 cut(s) | 293 |
| MalI | GATC | 5 cut(s) | 99, 207, 359, 427, 623 |
| MboI | GATC | 5 cut(s) | 97, 205, 357, 425, 621 |
| MboII | GAAGA | 2 cut(s) | 39, 120 |
| MflI | RGATCY | 3 cut(s) | 97, 357, 621 |
| MhlI | GDGCHC | 2 cut(s) | 62, 398 |
| MlsI | TGGCCA | 1 cut(s) | 597 |
| MluCI | AATT | 1 cut(s) | 9 |
| MluNI | TGGCCA | 1 cut(s) | 597 |
| Mly113I | GGCGCC | 1 cut(s) | 557 |
| MmeI | TCCRAC | 1 cut(s) | 329 |
| Mox20I | TGGCCA | 1 cut(s) | 597 |
| Mph1103I | ATGCAT | 1 cut(s) | 189 |
| MscI | TGGCCA | 1 cut(s) | 597 |
| MseI | TTAA | 1 cut(s) | 498 |
| MslI | CAYNNNNRTG | 1 cut(s) | 579 |
| Msp20I | TGGCCA | 1 cut(s) | 597 |
| MspI | CCGG | 1 cut(s) | 237 |
| MspR9I | CCNGG | 3 cut(s) | 63, 128, 489 |
| Mva1269I | GAATGC | 1 cut(s) | 162 |
| MvaI | CCWGG | 3 cut(s) | 63, 128, 489 |
| NarI | GGCGCC | 1 cut(s) | 557 |
| NdeII | GATC | 5 cut(s) | 97, 205, 357, 425, 621 |
| NlaIII | CATG | 6 cut(s) | 36, 170, 389, 472, 578, 596 |
| NlaIV | GGNNCC | 4 cut(s) | 99, 125, 493, 558 |
| NsiI | ATGCAT | 1 cut(s) | 189 |
| NspI | RCATGY | 2 cut(s) | 36, 472 |
| PaeI | GCATGC | 1 cut(s) | 472 |
| PaeR7I | CTCGAG | 1 cut(s) | 561 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 201, 449 |
| PctI | GAATGC | 1 cut(s) | 162 |
| PfeI | GAWTC | 2 cut(s) | 111, 341 |
| PkrI | GCNGC | 2 cut(s) | 77, 376 |
| PluTI | GGCGCC | 1 cut(s) | 560 |
| PsiI | TTATAA | 1 cut(s) | 410 |
| Psp6I | CCWGG | 3 cut(s) | 61, 126, 487 |
| PspGI | CCWGG | 3 cut(s) | 61, 126, 487 |
| PspN4I | GGNNCC | 4 cut(s) | 99, 125, 493, 558 |
| PspPI | GGNCC | 1 cut(s) | 310 |
| PspXI | VCTCGAGB | 1 cut(s) | 561 |
| PsuI | RGATCY | 3 cut(s) | 97, 357, 621 |
| RsaI | GTAC | 4 cut(s) | 152, 212, 513, 572 |
| RsaNI | GTAC | 4 cut(s) | 151, 211, 512, 571 |
| RseI | CAYNNNNRTG | 1 cut(s) | 579 |
| SaqAI | TTAA | 1 cut(s) | 498 |
| SatI | GCNGC | 2 cut(s) | 76, 375 |
| Sau3AI | GATC | 5 cut(s) | 97, 205, 357, 425, 621 |
| Sau96I | GGNCC | 1 cut(s) | 310 |
| ScrFI | CCNGG | 3 cut(s) | 63, 128, 489 |
| SduI | GDGCHC | 2 cut(s) | 62, 398 |
| SfaNI | GCATC | 7 cut(s) | 7, 58, 174, 220, 276, 444, 454 |
| SfcI | CTRYAG | 1 cut(s) | 345 |
| SfoI | GGCGCC | 1 cut(s) | 558 |
| Sfr274I | CTCGAG | 1 cut(s) | 561 |
| SinI | GGWCC | 1 cut(s) | 310 |
| SlaI | CTCGAG | 1 cut(s) | 561 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 579 |
| SmlI | CTYRAG | 2 cut(s) | 92, 561 |
| SmoI | CTYRAG | 2 cut(s) | 92, 561 |
| SphI | GCATGC | 1 cut(s) | 472 |
| Sse9I | AATT | 1 cut(s) | 9 |
| SsiI | CCGC | 2 cut(s) | 283, 439 |
| SspDI | GGCGCC | 1 cut(s) | 556 |
| SspMI | CTAG | 2 cut(s) | 329, 611 |
| StyD4I | CCNGG | 3 cut(s) | 61, 126, 487 |
| TaaI | ACNGT | 1 cut(s) | 118 |
| TaiI | ACGT | 1 cut(s) | 336 |
| TaqI | TCGA | 2 cut(s) | 562, 615 |
| TasI | AATT | 1 cut(s) | 9 |
| TatI | WGTACW | 2 cut(s) | 210, 511 |
| TfiI | GAWTC | 2 cut(s) | 111, 341 |
| Tru1I | TTAA | 1 cut(s) | 498 |
| Tru9I | TTAA | 1 cut(s) | 498 |
| TscAI | CASTG | 3 cut(s) | 123, 408, 605 |
| TseI | GCWGC | 2 cut(s) | 75, 374 |
| TspGWI | ACGGA | 1 cut(s) | 323 |
| TspRI | CASTG | 3 cut(s) | 123, 408, 605 |
| VpaK11BI | GGWCC | 1 cut(s) | 310 |
| XbaI | TCTAGA | 1 cut(s) | 328 |
| XceI | RCATGY | 2 cut(s) | 36, 472 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 429 |
| XhoI | CTCGAG | 1 cut(s) | 561 |
| XmiI | GTMKAC | 1 cut(s) | 254 |
| XspI | CTAG | 2 cut(s) | 329, 611 |
| Zsp2I | ATGCAT | 1 cut(s) | 189 |