Ribosomal protein-like protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 137, 1131 |
| AccBSI | CCGCTC | 1 cut(s) | 755 |
| AccII | CGCG | 3 cut(s) | 733, 1095, 1139 |
| AciI | CCGC | 4 cut(s) | 12, 611, 755, 1129 |
| AclWI | GGATC | 2 cut(s) | 481, 669 |
| AcoI | YGGCCR | 1 cut(s) | 264 |
| AcuI | CTGAAG | 1 cut(s) | 686 |
| AcyI | GRCGYC | 1 cut(s) | 1132 |
| AfaI | GTAC | 3 cut(s) | 50, 233, 692 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 918, 975, 1169, 1215 |
| AflII | CTTAAG | 1 cut(s) | 118 |
| AflIII | ACRYGT | 3 cut(s) | 110, 397, 1137 |
| AgeI | ACCGGT | 1 cut(s) | 968 |
| AgsI | TTSAA | 2 cut(s) | 9, 557 |
| AjiI | CACGTC | 1 cut(s) | 1203 |
| AjnI | CCWGG | 4 cut(s) | 310, 469, 899, 941 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 699, 731 |
| AluBI | AGCT | 8 cut(s) | 39, 106, 293, 523, 1149, 1230, 1323, 1332 |
| AluI | AGCT | 8 cut(s) | 39, 106, 293, 523, 1149, 1230, 1323, 1332 |
| Alw21I | GWGCWC | 1 cut(s) | 525 |
| Alw26I | GTCTC | 3 cut(s) | 188, 889, 1126 |
| AlwI | GGATC | 2 cut(s) | 481, 669 |
| Ama87I | CYCGRG | 1 cut(s) | 911 |
| AoxI | GGCC | 2 cut(s) | 264, 1072 |
| ApeKI | GCWGC | 1 cut(s) | 71 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 35, 67 |
| AsiGI | ACCGGT | 1 cut(s) | 968 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 780 |
| AspLEI | GCGC | 3 cut(s) | 158, 735, 1134 |
| AspS9I | GGNCC | 1 cut(s) | 1073 |
| AsuC2I | CCSGG | 4 cut(s) | 142, 912, 913, 1315 |
| AsuHPI | GGTGA | 2 cut(s) | 983, 1010 |
| AsuNHI | GCTAGC | 1 cut(s) | 35 |
| AvaI | CYCGRG | 1 cut(s) | 911 |
| BaeGI | GKGCMC | 1 cut(s) | 405 |
| BanI | GGYRCC | 2 cut(s) | 137, 1131 |
| BanII | GRGCYC | 2 cut(s) | 256, 525 |
| BauI | CACGAG | 1 cut(s) | 759 |
| BbsI | GAAGAC | 2 cut(s) | 283, 783 |
| Bbv12I | GWGCWC | 1 cut(s) | 525 |
| BbvI | GCAGC | 1 cut(s) | 58 |
| BccI | CCATC | 6 cut(s) | 166, 197, 593, 597, 1001, 1028 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 509, 543 |
| BciT130I | CCWGG | 4 cut(s) | 312, 471, 901, 943 |
| BciVI | GTATCC | 1 cut(s) | 946 |
| BclI | TGATCA | 1 cut(s) | 1197 |
| BcnI | CCSGG | 4 cut(s) | 142, 912, 913, 1315 |
| BcoDI | GTCTC | 3 cut(s) | 188, 889, 1126 |
| BfaI | CTAG | 2 cut(s) | 36, 1118 |
| BfmI | CTRYAG | 1 cut(s) | 1288 |
| BfoI | RGCGCY | 1 cut(s) | 1135 |
| BfrI | CTTAAG | 1 cut(s) | 118 |
| BfuI | GTATCC | 1 cut(s) | 946 |
| BisI | GCNGC | 3 cut(s) | 72, 756, 1130 |
| BlpI | GCTNAGC | 1 cut(s) | 1226 |
| BlsI | GCNGC | 3 cut(s) | 73, 757, 1131 |
| BmcAI | AGTACT | 1 cut(s) | 50 |
| Bme1390I | CCNGG | 8 cut(s) | 142, 312, 471, 901, 912, 913, 943, 1315 |
| BmeT110I | CYCGRG | 1 cut(s) | 911 |
| BmgBI | CACGTC | 1 cut(s) | 1203 |
| BmgT120I | GGNCC | 1 cut(s) | 1073 |
| BmiI | GGNNCC | 4 cut(s) | 139, 255, 1075, 1133 |
| BmrFI | CCNGG | 8 cut(s) | 142, 312, 471, 901, 912, 913, 943, 1315 |
| BmsI | GCATC | 2 cut(s) | 23, 1056 |
| BmtI | GCTAGC | 1 cut(s) | 39 |
| BoxI | GACNNNNGTC | 1 cut(s) | 29 |
| BpiI | GAAGAC | 2 cut(s) | 283, 783 |
| BpmI | CTGGAG | 1 cut(s) | 396 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1226 |
| BpuEI | CTTGAG | 1 cut(s) | 666 |
| BpuMI | CCSGG | 4 cut(s) | 142, 912, 913, 1315 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1196 |
| BsaHI | GRCGYC | 1 cut(s) | 1132 |
| BsaI | GGTCTC | 1 cut(s) | 889 |
| BsaWI | WCCGGW | 1 cut(s) | 968 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 31 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 918, 975, 1169, 1215 |
| Bse118I | RCCGGY | 1 cut(s) | 968 |
| Bse1I | ACTGG | 2 cut(s) | 20, 347 |
| Bse3DI | GCAATG | 2 cut(s) | 353, 620 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1196 |
| BseBI | CCWGG | 4 cut(s) | 312, 471, 901, 943 |
| BseGI | GGATG | 4 cut(s) | 177, 321, 411, 838 |
| BseJI | GATNNNNATC | 1 cut(s) | 1196 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 918, 975, 1169, 1215 |
| BseMI | GCAATG | 2 cut(s) | 353, 620 |
| BseMII | CTCAG | 4 cut(s) | 150, 285, 1179, 1217 |
| BseNI | ACTGG | 2 cut(s) | 20, 347 |
| BseRI | GAGGAG | 1 cut(s) | 765 |
| BseSI | GKGCMC | 1 cut(s) | 405 |
| BseX3I | CGGCCG | 1 cut(s) | 264 |
| BseXI | GCAGC | 1 cut(s) | 58 |
| BseYI | CCCAGC | 3 cut(s) | 96, 765, 1220 |
| Bsh1236I | CGCG | 3 cut(s) | 733, 1095, 1139 |
| Bsh1285I | CGRYCG | 2 cut(s) | 267, 1071 |
| BshFI | GGCC | 2 cut(s) | 266, 1074 |
| BshNI | GGYRCC | 2 cut(s) | 137, 1131 |
| BshTI | ACCGGT | 1 cut(s) | 968 |
| BsiEI | CGRYCG | 2 cut(s) | 267, 1071 |
| BsiHKAI | GWGCWC | 1 cut(s) | 525 |
| BsiHKCI | CYCGRG | 1 cut(s) | 911 |
| BsiSI | CCGG | 5 cut(s) | 141, 263, 912, 969, 1315 |
| BslFI | GGGAC | 1 cut(s) | 490 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 918, 975, 1169, 1215 |
| BsmAI | GTCTC | 3 cut(s) | 188, 889, 1126 |
| BsmFI | GGGAC | 1 cut(s) | 490 |
| BsmI | GAATGC | 2 cut(s) | 129, 471 |
| BsnI | GGCC | 2 cut(s) | 266, 1074 |
| Bso31I | GGTCTC | 1 cut(s) | 889 |
| BsoBI | CYCGRG | 1 cut(s) | 911 |
| Bsp1286I | GDGCHC | 3 cut(s) | 256, 405, 525 |
| Bsp143I | GATC | 5 cut(s) | 148, 473, 661, 1197, 1212 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1226 |
| BspACI | CCGC | 4 cut(s) | 12, 611, 755, 1129 |
| BspANI | GGCC | 2 cut(s) | 266, 1074 |
| BspCNI | CTCAG | 4 cut(s) | 151, 286, 1180, 1218 |
| BspFNI | CGCG | 3 cut(s) | 733, 1095, 1139 |
| BspLI | GGNNCC | 4 cut(s) | 139, 255, 1075, 1133 |
| BspOI | GCTAGC | 1 cut(s) | 39 |
| BspPI | GGATC | 2 cut(s) | 481, 669 |
| BspT107I | GGYRCC | 2 cut(s) | 137, 1131 |
| BspTI | CTTAAG | 1 cut(s) | 118 |
| BspTNI | GGTCTC | 1 cut(s) | 889 |
| BsrBI | CCGCTC | 1 cut(s) | 755 |
| BsrDI | GCAATG | 2 cut(s) | 353, 620 |
| BsrFI | RCCGGY | 1 cut(s) | 968 |
| BsrI | ACTGG | 2 cut(s) | 20, 347 |
| BssAI | RCCGGY | 1 cut(s) | 968 |
| BssMI | GATC | 5 cut(s) | 148, 473, 661, 1197, 1212 |
| BssNI | GRCGYC | 1 cut(s) | 1132 |
| BssSI | CACGAG | 1 cut(s) | 759 |
| BssT1I | CCWWGG | 1 cut(s) | 657 |
| Bst2BI | CACGAG | 1 cut(s) | 759 |
| Bst2UI | CCWGG | 4 cut(s) | 312, 471, 901, 943 |
| BstACI | GRCGYC | 1 cut(s) | 1132 |
| BstAFI | CTTAAG | 1 cut(s) | 118 |
| BstC8I | GCNNGC | 6 cut(s) | 37, 129, 338, 453, 498, 1232 |
| BstDEI | CTNAG | 7 cut(s) | 75, 159, 272, 294, 501, 1188, 1226 |
| BstF5I | GGATG | 4 cut(s) | 177, 321, 411, 838 |
| BstFNI | CGCG | 3 cut(s) | 733, 1095, 1139 |
| BstH2I | RGCGCY | 1 cut(s) | 1135 |
| BstHHI | GCGC | 3 cut(s) | 158, 735, 1134 |
| BstKTI | GATC | 5 cut(s) | 151, 476, 664, 1200, 1215 |
| BstMAI | GTCTC | 3 cut(s) | 188, 889, 1126 |
| BstMBI | GATC | 5 cut(s) | 148, 473, 661, 1197, 1212 |
| BstMCI | CGRYCG | 2 cut(s) | 267, 1071 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 137, 333, 536, 1231, 1329 |
| BstNI | CCWGG | 4 cut(s) | 312, 471, 901, 943 |
| BstNSI | RCATGY | 4 cut(s) | 114, 340, 455, 1238 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 29 |
| BstSCI | CCNGG | 8 cut(s) | 140, 310, 469, 899, 910, 911, 941, 1313 |
| BstSFI | CTRYAG | 1 cut(s) | 1288 |
| BstSLI | GKGCMC | 1 cut(s) | 405 |
| BstUI | CGCG | 3 cut(s) | 733, 1095, 1139 |
| BstV1I | GCAGC | 1 cut(s) | 58 |
| BstV2I | GAAGAC | 2 cut(s) | 283, 783 |
| BstX2I | RGATCY | 1 cut(s) | 661 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 369 |
| BstYI | RGATCY | 1 cut(s) | 661 |
| BstZI | CGGCCG | 1 cut(s) | 264 |
| BsuI | GTATCC | 1 cut(s) | 946 |
| BsuRI | GGCC | 2 cut(s) | 266, 1074 |
| BtgZI | GCGATG | 1 cut(s) | 867 |
| BtrI | CACGTC | 1 cut(s) | 1203 |
| BtsCI | GGATG | 4 cut(s) | 177, 321, 411, 838 |
| BtsI | GCAGTG | 1 cut(s) | 525 |
| BtsIMutI | CAGTG | 3 cut(s) | 27, 340, 525 |
| Cac8I | GCNNGC | 6 cut(s) | 37, 129, 338, 453, 498, 1232 |
| CfoI | GCGC | 3 cut(s) | 158, 735, 1134 |
| Cfr10I | RCCGGY | 1 cut(s) | 968 |
| Cfr13I | GGNCC | 1 cut(s) | 1073 |
| Cfr9I | CCCGGG | 1 cut(s) | 911 |
| CseI | GACGC | 1 cut(s) | 1164 |
| Csp6I | GTAC | 3 cut(s) | 49, 232, 691 |
| CspAI | ACCGGT | 1 cut(s) | 968 |
| CviQI | GTAC | 3 cut(s) | 49, 232, 691 |
| DdeI | CTNAG | 7 cut(s) | 75, 159, 272, 294, 501, 1188, 1226 |
| DinI | GGCGCC | 1 cut(s) | 1133 |
| DpnI | GATC | 5 cut(s) | 150, 475, 663, 1199, 1214 |
| DpnII | GATC | 5 cut(s) | 148, 473, 661, 1197, 1212 |
| DraI | TTTAAA | 1 cut(s) | 726 |
| EaeI | YGGCCR | 1 cut(s) | 264 |
| EagI | CGGCCG | 1 cut(s) | 264 |
| Ecl136II | GAGCTC | 1 cut(s) | 523 |
| EclXI | CGGCCG | 1 cut(s) | 264 |
| Eco130I | CCWWGG | 1 cut(s) | 657 |
| Eco24I | GRGCYC | 2 cut(s) | 256, 525 |
| Eco31I | GGTCTC | 1 cut(s) | 889 |
| Eco32I | GATATC | 1 cut(s) | 906 |
| Eco52I | CGGCCG | 1 cut(s) | 264 |
| Eco53kI | GAGCTC | 1 cut(s) | 523 |
| Eco57I | CTGAAG | 1 cut(s) | 686 |
| Eco88I | CYCGRG | 1 cut(s) | 911 |
| EcoICRI | GAGCTC | 1 cut(s) | 523 |
| EcoRII | CCWGG | 4 cut(s) | 310, 469, 899, 941 |
| EcoRV | GATATC | 1 cut(s) | 906 |
| EcoT14I | CCWWGG | 1 cut(s) | 657 |
| EcoT22I | ATGCAT | 1 cut(s) | 1049 |
| EcoT38I | GRGCYC | 2 cut(s) | 256, 525 |
| EgeI | GGCGCC | 1 cut(s) | 1133 |
| EheI | GGCGCC | 1 cut(s) | 1133 |
| ErhI | CCWWGG | 1 cut(s) | 657 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 719, 751, 765, 797 |
| FaqI | GGGAC | 1 cut(s) | 490 |
| FauNDI | CATATG | 1 cut(s) | 67 |
| FbaI | TGATCA | 1 cut(s) | 1197 |
| Fnu4HI | GCNGC | 3 cut(s) | 72, 756, 1130 |
| FokI | GGATG | 4 cut(s) | 184, 328, 398, 845 |
| FriOI | GRGCYC | 2 cut(s) | 256, 525 |
| Fsp4HI | GCNGC | 3 cut(s) | 72, 756, 1130 |
| FspBI | CTAG | 2 cut(s) | 36, 1118 |
| GlaI | GCGC | 3 cut(s) | 157, 734, 1133 |
| GluI | GCNGC | 3 cut(s) | 72, 756, 1130 |
| GsaI | CCCAGC | 3 cut(s) | 100, 769, 1224 |
| GsuI | CTGGAG | 1 cut(s) | 396 |
| HaeII | RGCGCY | 1 cut(s) | 1135 |
| HaeIII | GGCC | 2 cut(s) | 266, 1074 |
| HapII | CCGG | 5 cut(s) | 141, 263, 912, 969, 1315 |
| HgaI | GACGC | 1 cut(s) | 1164 |
| HhaI | GCGC | 3 cut(s) | 158, 735, 1134 |
| Hin1I | GRCGYC | 1 cut(s) | 1132 |
| Hin6I | GCGC | 3 cut(s) | 156, 733, 1132 |
| HinP1I | GCGC | 3 cut(s) | 156, 733, 1132 |
| HindIII | AAGCTT | 1 cut(s) | 1321 |
| HinfI | GANTC | 7 cut(s) | 196, 219, 571, 866, 962, 989, 1016 |
| HpaII | CCGG | 5 cut(s) | 141, 263, 912, 969, 1315 |
| HphI | GGTGA | 2 cut(s) | 983, 1010 |
| Hpy166II | GTNNAC | 1 cut(s) | 1157 |
| Hpy188I | TCNGA | 6 cut(s) | 86, 171, 201, 666, 676, 871 |
| Hpy188III | TCNNGA | 5 cut(s) | 58, 193, 628, 683, 1295 |
| Hpy8I | GTNNAC | 1 cut(s) | 1157 |
| Hpy99I | CGWCG | 2 cut(s) | 1180, 1183 |
| HpyAV | CCTTC | 4 cut(s) | 466, 691, 791, 968 |
| HpyCH4IV | ACGT | 3 cut(s) | 397, 492, 1202 |
| HpyCH4V | TGCA | 4 cut(s) | 336, 340, 480, 1047 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 137, 333, 536, 1231, 1329 |
| HpyF3I | CTNAG | 7 cut(s) | 75, 159, 272, 294, 501, 1188, 1226 |
| HpySE526I | ACGT | 3 cut(s) | 397, 492, 1202 |
| Hsp92I | GRCGYC | 1 cut(s) | 1132 |
| HspAI | GCGC | 3 cut(s) | 156, 733, 1132 |
| KasI | GGCGCC | 1 cut(s) | 1131 |
| Ksp22I | TGATCA | 1 cut(s) | 1197 |
| Kzo9I | GATC | 5 cut(s) | 148, 473, 661, 1197, 1212 |
| LmnI | GCTCC | 2 cut(s) | 259, 752 |
| Lsp1109I | GCAGC | 1 cut(s) | 58 |
| LweI | GCATC | 2 cut(s) | 23, 1056 |
| MaeI | CTAG | 2 cut(s) | 36, 1118 |
| MaeII | ACGT | 3 cut(s) | 397, 492, 1202 |
| MaeIII | GTNAC | 1 cut(s) | 22 |
| MalI | GATC | 5 cut(s) | 150, 475, 663, 1199, 1214 |
| MbiI | CCGCTC | 1 cut(s) | 755 |
| MboI | GATC | 5 cut(s) | 148, 473, 661, 1197, 1212 |
| MboII | GAAGA | 5 cut(s) | 288, 364, 788, 887, 890 |
| MfeI | CAATTG | 1 cut(s) | 509 |
| MflI | RGATCY | 1 cut(s) | 661 |
| MhlI | GDGCHC | 3 cut(s) | 256, 405, 525 |
| MluCI | AATT | 5 cut(s) | 355, 509, 551, 577, 636 |
| MluI | ACGCGT | 1 cut(s) | 1137 |
| Mly113I | GGCGCC | 1 cut(s) | 1132 |
| MlyI | GAGTC | 2 cut(s) | 190, 875 |
| MmeI | TCCRAC | 2 cut(s) | 64, 149 |
| Mph1103I | ATGCAT | 1 cut(s) | 1049 |
| MroXI | GAANNNNTTC | 1 cut(s) | 780 |
| MseI | TTAA | 3 cut(s) | 119, 225, 725 |
| MslI | CAYNNNNRTG | 1 cut(s) | 445 |
| MspA1I | CMGCKG | 1 cut(s) | 1332 |
| MspCI | CTTAAG | 1 cut(s) | 118 |
| MspI | CCGG | 5 cut(s) | 141, 263, 912, 969, 1315 |
| MspR9I | CCNGG | 8 cut(s) | 142, 312, 471, 901, 912, 913, 943, 1315 |
| MunI | CAATTG | 1 cut(s) | 509 |
| Mva1269I | GAATGC | 2 cut(s) | 129, 471 |
| MvaI | CCWGG | 4 cut(s) | 312, 471, 901, 943 |
| MvnI | CGCG | 3 cut(s) | 733, 1095, 1139 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 137, 333, 536, 1231, 1329 |
| NarI | GGCGCC | 1 cut(s) | 1132 |
| NciI | CCSGG | 4 cut(s) | 142, 912, 913, 1315 |
| NdeI | CATATG | 1 cut(s) | 67 |
| NdeII | GATC | 5 cut(s) | 148, 473, 661, 1197, 1212 |
| NheI | GCTAGC | 1 cut(s) | 35 |
| NlaIV | GGNNCC | 4 cut(s) | 139, 255, 1075, 1133 |
| NmeAIII | GCCGAG | 1 cut(s) | 215 |
| NmuCI | GTSAC | 1 cut(s) | 22 |
| NsiI | ATGCAT | 1 cut(s) | 1049 |
| NspI | RCATGY | 4 cut(s) | 114, 340, 455, 1238 |
| PaeI | GCATGC | 2 cut(s) | 340, 455 |
| PciI | ACATGT | 1 cut(s) | 110 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1099, 1208 |
| PctI | GAATGC | 2 cut(s) | 129, 471 |
| PdmI | GAANNNNTTC | 1 cut(s) | 780 |
| PfeI | GAWTC | 5 cut(s) | 219, 571, 962, 989, 1016 |
| PinAI | ACCGGT | 1 cut(s) | 968 |
| PkrI | GCNGC | 3 cut(s) | 73, 757, 1131 |
| PleI | GAGTC | 2 cut(s) | 190, 874 |
| PluTI | GGCGCC | 1 cut(s) | 1135 |
| PpsI | GAGTC | 2 cut(s) | 190, 874 |
| PscI | ACATGT | 1 cut(s) | 110 |
| PshAI | GACNNNNGTC | 1 cut(s) | 29 |
| Psp124BI | GAGCTC | 1 cut(s) | 525 |
| Psp6I | CCWGG | 4 cut(s) | 310, 469, 899, 941 |
| PspFI | CCCAGC | 3 cut(s) | 96, 765, 1220 |
| PspGI | CCWGG | 4 cut(s) | 310, 469, 899, 941 |
| PspN4I | GGNNCC | 4 cut(s) | 139, 255, 1075, 1133 |
| PspPI | GGNCC | 1 cut(s) | 1073 |
| PsuI | RGATCY | 1 cut(s) | 661 |
| PvuII | CAGCTG | 1 cut(s) | 1332 |
| RsaI | GTAC | 3 cut(s) | 50, 233, 692 |
| RsaNI | GTAC | 3 cut(s) | 49, 232, 691 |
| RseI | CAYNNNNRTG | 1 cut(s) | 445 |
| SacI | GAGCTC | 1 cut(s) | 525 |
| SaqAI | TTAA | 3 cut(s) | 119, 225, 725 |
| SatI | GCNGC | 3 cut(s) | 72, 756, 1130 |
| Sau3AI | GATC | 5 cut(s) | 148, 473, 661, 1197, 1212 |
| Sau96I | GGNCC | 1 cut(s) | 1073 |
| ScaI | AGTACT | 1 cut(s) | 50 |
| SchI | GAGTC | 2 cut(s) | 190, 875 |
| ScrFI | CCNGG | 8 cut(s) | 142, 312, 471, 901, 912, 913, 943, 1315 |
| SduI | GDGCHC | 3 cut(s) | 256, 405, 525 |
| SfaNI | GCATC | 2 cut(s) | 23, 1056 |
| SfcI | CTRYAG | 1 cut(s) | 1288 |
| SfoI | GGCGCC | 1 cut(s) | 1133 |
| SgrAI | CRCCGGYG | 1 cut(s) | 968 |
| SmaI | CCCGGG | 1 cut(s) | 913 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 445 |
| SmlI | CTYRAG | 2 cut(s) | 118, 681 |
| SmoI | CTYRAG | 2 cut(s) | 118, 681 |
| SphI | GCATGC | 2 cut(s) | 340, 455 |
| Sse9I | AATT | 5 cut(s) | 355, 509, 551, 577, 636 |
| SsiI | CCGC | 4 cut(s) | 12, 611, 755, 1129 |
| SspDI | GGCGCC | 1 cut(s) | 1131 |
| SspMI | CTAG | 2 cut(s) | 36, 1118 |
| SstI | GAGCTC | 1 cut(s) | 525 |
| StyD4I | CCNGG | 8 cut(s) | 140, 310, 469, 899, 910, 911, 941, 1313 |
| StyI | CCWWGG | 1 cut(s) | 657 |
| TaiI | ACGT | 3 cut(s) | 400, 495, 1205 |
| TaqI | TCGA | 6 cut(s) | 192, 330, 417, 748, 784, 828 |
| TaqII | GACCGA | 2 cut(s) | 1057, 1238 |
| TasI | AATT | 5 cut(s) | 355, 509, 551, 577, 636 |
| TatI | WGTACW | 2 cut(s) | 48, 231 |
| TauI | GCSGC | 2 cut(s) | 758, 1132 |
| TfiI | GAWTC | 5 cut(s) | 219, 571, 962, 989, 1016 |
| Tru1I | TTAA | 3 cut(s) | 119, 225, 725 |
| Tru9I | TTAA | 3 cut(s) | 119, 225, 725 |
| TscAI | CASTG | 3 cut(s) | 27, 347, 532 |
| TseFI | GTSAC | 1 cut(s) | 22 |
| TseI | GCWGC | 1 cut(s) | 71 |
| Tsp45I | GTSAC | 1 cut(s) | 22 |
| TspDTI | ATGAA | 4 cut(s) | 575, 710, 849, 888 |
| TspMI | CCCGGG | 1 cut(s) | 911 |
| TspRI | CASTG | 3 cut(s) | 27, 347, 532 |
| Vha464I | CTTAAG | 1 cut(s) | 118 |
| XceI | RCATGY | 4 cut(s) | 114, 340, 455, 1238 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 596, 946 |
| XmaI | CCCGGG | 1 cut(s) | 911 |
| XmnI | GAANNNNTTC | 1 cut(s) | 780 |
| XspI | CTAG | 2 cut(s) | 36, 1118 |
| ZrmI | AGTACT | 1 cut(s) | 50 |
| Zsp2I | ATGCAT | 1 cut(s) | 1049 |