Ribosomal protein-like protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Plant_tran | PF04827 | 2 - 92 | 2.4e-36 | Plant transposon protein |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 149 |
| AccB1I | GGYRCC | 1 cut(s) | 149 |
| AccII | CGCG | 2 cut(s) | 43, 79 |
| AciI | CCGC | 3 cut(s) | 41, 77, 79 |
| AclWI | GGATC | 1 cut(s) | 210 |
| AcyI | GRCGYC | 1 cut(s) | 345 |
| AfaI | GTAC | 3 cut(s) | 5, 151, 269 |
| AflIII | ACRYGT | 1 cut(s) | 323 |
| AgsI | TTSAA | 3 cut(s) | 318, 413, 431 |
| AjiI | CACGTC | 2 cut(s) | 74, 231 |
| AluBI | AGCT | 5 cut(s) | 26, 108, 161, 358, 497 |
| AluI | AGCT | 5 cut(s) | 26, 108, 161, 358, 497 |
| Alw21I | GWGCWC | 3 cut(s) | 340, 360, 477 |
| AlwI | GGATC | 1 cut(s) | 210 |
| AoxI | GGCC | 1 cut(s) | 11 |
| ApeKI | GCWGC | 1 cut(s) | 185 |
| Asp718I | GGTACC | 1 cut(s) | 149 |
| AspS9I | GGNCC | 1 cut(s) | 11 |
| AsuC2I | CCSGG | 1 cut(s) | 454 |
| BanI | GGYRCC | 1 cut(s) | 149 |
| BanII | GRGCYC | 1 cut(s) | 360 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 195, 227 |
| BauI | CACGAG | 1 cut(s) | 359 |
| Bbv12I | GWGCWC | 3 cut(s) | 340, 360, 477 |
| BbvI | GCAGC | 1 cut(s) | 172 |
| BccI | CCATC | 3 cut(s) | 39, 227, 380 |
| BceAI | ACGGC | 2 cut(s) | 46, 266 |
| BcnI | CCSGG | 1 cut(s) | 454 |
| BfaI | CTAG | 1 cut(s) | 23 |
| BisI | GCNGC | 1 cut(s) | 186 |
| BlsI | GCNGC | 1 cut(s) | 187 |
| Bme1390I | CCNGG | 1 cut(s) | 454 |
| BmgBI | CACGTC | 2 cut(s) | 74, 231 |
| BmgT120I | GGNCC | 1 cut(s) | 11 |
| BmiI | GGNNCC | 1 cut(s) | 151 |
| BmrFI | CCNGG | 1 cut(s) | 454 |
| BmsI | GCATC | 1 cut(s) | 243 |
| BpuMI | CCSGG | 1 cut(s) | 454 |
| BsaAI | YACGTR | 1 cut(s) | 326 |
| BsaHI | GRCGYC | 1 cut(s) | 345 |
| BsaJI | CCNNGG | 1 cut(s) | 77 |
| Bse1I | ACTGG | 1 cut(s) | 478 |
| BseDI | CCNNGG | 1 cut(s) | 77 |
| BseGI | GGATG | 2 cut(s) | 136, 391 |
| BseNI | ACTGG | 1 cut(s) | 478 |
| BseXI | GCAGC | 1 cut(s) | 172 |
| BsgI | GTGCAG | 1 cut(s) | 142 |
| Bsh1236I | CGCG | 2 cut(s) | 43, 79 |
| Bsh1285I | CGRYCG | 1 cut(s) | 174 |
| BshFI | GGCC | 1 cut(s) | 13 |
| BshNI | GGYRCC | 1 cut(s) | 149 |
| BsiEI | CGRYCG | 1 cut(s) | 174 |
| BsiHKAI | GWGCWC | 3 cut(s) | 340, 360, 477 |
| BsiSI | CCGG | 1 cut(s) | 454 |
| BsnI | GGCC | 1 cut(s) | 13 |
| Bsp1286I | GDGCHC | 3 cut(s) | 340, 360, 477 |
| Bsp143I | GATC | 2 cut(s) | 171, 215 |
| BspACI | CCGC | 3 cut(s) | 41, 77, 79 |
| BspANI | GGCC | 1 cut(s) | 13 |
| BspFNI | CGCG | 2 cut(s) | 43, 79 |
| BspHI | TCATGA | 2 cut(s) | 222, 340 |
| BspLI | GGNNCC | 1 cut(s) | 151 |
| BspPI | GGATC | 1 cut(s) | 210 |
| BspT107I | GGYRCC | 1 cut(s) | 149 |
| BsrI | ACTGG | 1 cut(s) | 478 |
| BssECI | CCNNGG | 1 cut(s) | 77 |
| BssMI | GATC | 2 cut(s) | 171, 215 |
| BssNI | GRCGYC | 1 cut(s) | 345 |
| BssSI | CACGAG | 1 cut(s) | 359 |
| Bst2BI | CACGAG | 1 cut(s) | 359 |
| Bst4CI | ACNGT | 1 cut(s) | 67 |
| BstACI | GRCGYC | 1 cut(s) | 345 |
| BstBAI | YACGTR | 1 cut(s) | 326 |
| BstC8I | GCNNGC | 1 cut(s) | 106 |
| BstDSI | CCRYGG | 1 cut(s) | 77 |
| BstF5I | GGATG | 2 cut(s) | 136, 391 |
| BstFNI | CGCG | 2 cut(s) | 43, 79 |
| BstKTI | GATC | 2 cut(s) | 174, 218 |
| BstMBI | GATC | 2 cut(s) | 171, 215 |
| BstMCI | CGRYCG | 1 cut(s) | 174 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 76, 167, 344, 370, 442 |
| BstNSI | RCATGY | 1 cut(s) | 445 |
| BstSCI | CCNGG | 1 cut(s) | 452 |
| BstUI | CGCG | 2 cut(s) | 43, 79 |
| BstV1I | GCAGC | 1 cut(s) | 172 |
| BsuRI | GGCC | 1 cut(s) | 13 |
| BtgI | CCRYGG | 1 cut(s) | 77 |
| BtgZI | GCGATG | 1 cut(s) | 58 |
| BtrI | CACGTC | 2 cut(s) | 74, 231 |
| BtsCI | GGATG | 2 cut(s) | 136, 391 |
| BtsIMutI | CAGTG | 2 cut(s) | 72, 485 |
| Cac8I | GCNNGC | 1 cut(s) | 106 |
| CciI | TCATGA | 2 cut(s) | 222, 340 |
| Cfr13I | GGNCC | 1 cut(s) | 11 |
| Cfr42I | CCGCGG | 1 cut(s) | 80 |
| CseI | GACGC | 1 cut(s) | 353 |
| Csp6I | GTAC | 3 cut(s) | 4, 150, 268 |
| CviAII | CATG | 6 cut(s) | 223, 250, 341, 368, 442, 486 |
| CviQI | GTAC | 3 cut(s) | 4, 150, 268 |
| DpnI | GATC | 2 cut(s) | 173, 217 |
| DpnII | GATC | 2 cut(s) | 171, 215 |
| Ecl136II | GAGCTC | 1 cut(s) | 358 |
| Eco24I | GRGCYC | 1 cut(s) | 360 |
| Eco53kI | GAGCTC | 1 cut(s) | 358 |
| EcoICRI | GAGCTC | 1 cut(s) | 358 |
| EcoT22I | ATGCAT | 1 cut(s) | 447 |
| EcoT38I | GRGCYC | 1 cut(s) | 360 |
| FaeI | CATG | 6 cut(s) | 226, 253, 344, 371, 445, 489 |
| FatI | CATG | 6 cut(s) | 222, 249, 340, 367, 441, 485 |
| FauI | CCCGC | 1 cut(s) | 48 |
| Fnu4HI | GCNGC | 1 cut(s) | 186 |
| FokI | GGATG | 2 cut(s) | 143, 398 |
| FriOI | GRGCYC | 1 cut(s) | 360 |
| Fsp4HI | GCNGC | 1 cut(s) | 186 |
| FspBI | CTAG | 1 cut(s) | 23 |
| GluI | GCNGC | 1 cut(s) | 186 |
| HaeIII | GGCC | 1 cut(s) | 13 |
| HapII | CCGG | 1 cut(s) | 454 |
| HgaI | GACGC | 1 cut(s) | 353 |
| Hin1I | GRCGYC | 1 cut(s) | 345 |
| Hin1II | CATG | 6 cut(s) | 226, 253, 344, 371, 445, 489 |
| HincII | GTYRAC | 1 cut(s) | 51 |
| HindII | GTYRAC | 1 cut(s) | 51 |
| HpaII | CCGG | 1 cut(s) | 454 |
| Hpy166II | GTNNAC | 1 cut(s) | 51 |
| Hpy188III | TCNNGA | 3 cut(s) | 113, 223, 341 |
| Hpy8I | GTNNAC | 1 cut(s) | 51 |
| Hpy99I | CGWCG | 1 cut(s) | 11 |
| HpyAV | CCTTC | 1 cut(s) | 121 |
| HpyCH4III | ACNGT | 1 cut(s) | 67 |
| HpyCH4IV | ACGT | 4 cut(s) | 73, 230, 325, 391 |
| HpyCH4V | TGCA | 7 cut(s) | 86, 104, 123, 234, 364, 425, 445 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 76, 167, 344, 370, 442 |
| HpySE526I | ACGT | 4 cut(s) | 73, 230, 325, 391 |
| Hsp92I | GRCGYC | 1 cut(s) | 345 |
| Hsp92II | CATG | 6 cut(s) | 226, 253, 344, 371, 445, 489 |
| KpnI | GGTACC | 1 cut(s) | 153 |
| KspI | CCGCGG | 1 cut(s) | 80 |
| Kzo9I | GATC | 2 cut(s) | 171, 215 |
| LmnI | GCTCC | 1 cut(s) | 136 |
| LpnPI | CCDG | 7 cut(s) | 109, 163, 202, 312, 450, 467, 491 |
| Lsp1109I | GCAGC | 1 cut(s) | 172 |
| LweI | GCATC | 1 cut(s) | 243 |
| MaeI | CTAG | 1 cut(s) | 23 |
| MaeII | ACGT | 4 cut(s) | 73, 230, 325, 391 |
| MaeIII | GTNAC | 1 cut(s) | 392 |
| MalI | GATC | 2 cut(s) | 173, 217 |
| MboI | GATC | 2 cut(s) | 171, 215 |
| MboII | GAAGA | 2 cut(s) | 233, 272 |
| MhlI | GDGCHC | 3 cut(s) | 340, 360, 477 |
| MluCI | AATT | 3 cut(s) | 313, 459, 505 |
| MnlI | CCTC | 2 cut(s) | 109, 164 |
| Mph1103I | ATGCAT | 1 cut(s) | 447 |
| MseI | TTAA | 1 cut(s) | 508 |
| MslI | CAYNNNNRTG | 2 cut(s) | 224, 254 |
| MspA1I | CMGCKG | 1 cut(s) | 79 |
| MspI | CCGG | 1 cut(s) | 454 |
| MspR9I | CCNGG | 1 cut(s) | 454 |
| MvnI | CGCG | 2 cut(s) | 43, 79 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 76, 167, 344, 370, 442 |
| NciI | CCSGG | 1 cut(s) | 454 |
| NdeII | GATC | 2 cut(s) | 171, 215 |
| NlaIII | CATG | 6 cut(s) | 226, 253, 344, 371, 445, 489 |
| NlaIV | GGNNCC | 1 cut(s) | 151 |
| NsiI | ATGCAT | 1 cut(s) | 447 |
| NspI | RCATGY | 1 cut(s) | 445 |
| PagI | TCATGA | 2 cut(s) | 222, 340 |
| PkrI | GCNGC | 1 cut(s) | 187 |
| Ple19I | CGATCG | 1 cut(s) | 174 |
| Ppu21I | YACGTR | 1 cut(s) | 326 |
| Psp124BI | GAGCTC | 1 cut(s) | 360 |
| PspN4I | GGNNCC | 1 cut(s) | 151 |
| PspPI | GGNCC | 1 cut(s) | 11 |
| PvuI | CGATCG | 1 cut(s) | 174 |
| RsaI | GTAC | 3 cut(s) | 5, 151, 269 |
| RsaNI | GTAC | 3 cut(s) | 4, 150, 268 |
| RseI | CAYNNNNRTG | 2 cut(s) | 224, 254 |
| SacI | GAGCTC | 1 cut(s) | 360 |
| SacII | CCGCGG | 1 cut(s) | 80 |
| SaqAI | TTAA | 1 cut(s) | 508 |
| SatI | GCNGC | 1 cut(s) | 186 |
| Sau3AI | GATC | 2 cut(s) | 171, 215 |
| Sau96I | GGNCC | 1 cut(s) | 11 |
| ScrFI | CCNGG | 1 cut(s) | 454 |
| SduI | GDGCHC | 3 cut(s) | 340, 360, 477 |
| SfaNI | GCATC | 1 cut(s) | 243 |
| Sfr303I | CCGCGG | 1 cut(s) | 80 |
| SgrBI | CCGCGG | 1 cut(s) | 80 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 224, 254 |
| Sse9I | AATT | 3 cut(s) | 313, 459, 505 |
| SsiI | CCGC | 3 cut(s) | 41, 77, 79 |
| SspMI | CTAG | 1 cut(s) | 23 |
| SstI | GAGCTC | 1 cut(s) | 360 |
| StyD4I | CCNGG | 1 cut(s) | 452 |
| TaaI | ACNGT | 1 cut(s) | 67 |
| TaiI | ACGT | 4 cut(s) | 76, 233, 328, 394 |
| TaqI | TCGA | 1 cut(s) | 214 |
| TasI | AATT | 3 cut(s) | 313, 459, 505 |
| Tru1I | TTAA | 1 cut(s) | 508 |
| Tru9I | TTAA | 1 cut(s) | 508 |
| TscAI | CASTG | 2 cut(s) | 72, 485 |
| TseI | GCWGC | 1 cut(s) | 185 |
| TspDTI | ATGAA | 4 cut(s) | 291, 303, 323, 414 |
| TspRI | CASTG | 2 cut(s) | 72, 485 |
| XceI | RCATGY | 1 cut(s) | 445 |
| XspI | CTAG | 1 cut(s) | 23 |
| Zsp2I | ATGCAT | 1 cut(s) | 447 |