Ribosomal protein-like protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 3 cut(s) | 491, 529, 2374 |
| AccI | GTMKAC | 2 cut(s) | 702, 1865 |
| AccIII | TCCGGA | 1 cut(s) | 1581 |
| AciI | CCGC | 8 cut(s) | 351, 414, 608, 1714, 2097, 2176, 2432, 2745 |
| AclWI | GGATC | 4 cut(s) | 4, 73, 1286, 1409 |
| AcoI | YGGCCR | 1 cut(s) | 859 |
| AcsI | RAATTY | 9 cut(s) | 17, 95, 730, 947, 2525, 2932, 3014, 3262, 3418 |
| AcvI | CACGTG | 1 cut(s) | 865 |
| AcyI | GRCGYC | 1 cut(s) | 1232 |
| AfaI | GTAC | 5 cut(s) | 1565, 1577, 2180, 3356, 3494 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 165, 1596, 2634 |
| AflIII | ACRYGT | 2 cut(s) | 2045, 3232 |
| AjiI | CACGTC | 1 cut(s) | 2046 |
| AjnI | CCWGG | 4 cut(s) | 483, 594, 1642, 2847 |
| AleI | CACNNNNGTG | 3 cut(s) | 2186, 3233, 3235 |
| Alw26I | GTCTC | 2 cut(s) | 217, 3063 |
| AlwI | GGATC | 4 cut(s) | 4, 73, 1286, 1409 |
| Ama87I | CYCGRG | 2 cut(s) | 2595, 2899 |
| Aor13HI | TCCGGA | 1 cut(s) | 1581 |
| AoxI | GGCC | 8 cut(s) | 553, 614, 660, 832, 859, 2444, 2562, 2782 |
| ApaI | GGGCCC | 1 cut(s) | 618 |
| ApeKI | GCWGC | 5 cut(s) | 605, 1484, 1770, 2000, 3303 |
| ApoI | RAATTY | 9 cut(s) | 17, 95, 730, 947, 2525, 2932, 3014, 3262, 3418 |
| AspLEI | GCGC | 1 cut(s) | 601 |
| AsuHPI | GGTGA | 4 cut(s) | 783, 1637, 1690, 2230 |
| AsuNHI | GCTAGC | 1 cut(s) | 2476 |
| AvaI | CYCGRG | 2 cut(s) | 2595, 2899 |
| AvaII | GGWCC | 5 cut(s) | 449, 777, 2109, 2851, 3399 |
| BaeGI | GKGCMC | 2 cut(s) | 425, 618 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2947, 2980 |
| BalI | TGGCCA | 1 cut(s) | 861 |
| BanI | GGYRCC | 3 cut(s) | 491, 529, 2374 |
| BanII | GRGCYC | 1 cut(s) | 618 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2820, 2852 |
| BauI | CACGAG | 1 cut(s) | 2120 |
| BbrPI | CACGTG | 1 cut(s) | 865 |
| BbvI | GCAGC | 5 cut(s) | 617, 1471, 1757, 1987, 3290 |
| BccI | CCATC | 9 cut(s) | 1008, 1093, 1222, 1498, 1838, 2042, 2141, 2820, 2945 |
| BceAI | ACGGC | 5 cut(s) | 658, 704, 2119, 2695, 2748 |
| BciT130I | CCWGG | 4 cut(s) | 485, 596, 1644, 2849 |
| BciVI | GTATCC | 3 cut(s) | 1976, 2948, 3404 |
| BclI | TGATCA | 2 cut(s) | 1149, 1339 |
| BcoDI | GTCTC | 2 cut(s) | 217, 3063 |
| BfmI | CTRYAG | 1 cut(s) | 372 |
| BfuI | GTATCC | 3 cut(s) | 1976, 2948, 3404 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2732 |
| BglII | AGATCT | 1 cut(s) | 2116 |
| BisI | GCNGC | 8 cut(s) | 606, 609, 1485, 1771, 2001, 2097, 2745, 3304 |
| BlsI | GCNGC | 8 cut(s) | 607, 610, 1486, 1772, 2002, 2098, 2746, 3305 |
| Bme1390I | CCNGG | 4 cut(s) | 485, 596, 1644, 2849 |
| Bme18I | GGWCC | 5 cut(s) | 449, 777, 2109, 2851, 3399 |
| BmeT110I | CYCGRG | 2 cut(s) | 2595, 2899 |
| BmgBI | CACGTC | 1 cut(s) | 2046 |
| BmiI | GGNNCC | 9 cut(s) | 389, 412, 450, 451, 493, 531, 616, 2376, 2989 |
| BmrFI | CCNGG | 4 cut(s) | 485, 596, 1644, 2849 |
| BmrI | ACTGGG | 1 cut(s) | 2560 |
| BmsI | GCATC | 8 cut(s) | 70, 1082, 1524, 1620, 2083, 2427, 3133, 3258 |
| BmtI | GCTAGC | 1 cut(s) | 2480 |
| BmuI | ACTGGG | 1 cut(s) | 2560 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1187, 1219 |
| BpmI | CTGGAG | 1 cut(s) | 1544 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1499 |
| BpuEI | CTTGAG | 6 cut(s) | 148, 1127, 1178, 2466, 3333, 3383 |
| Bsa29I | ATCGAT | 3 cut(s) | 1290, 2921, 2978 |
| BsaAI | YACGTR | 3 cut(s) | 768, 865, 2948 |
| BsaHI | GRCGYC | 1 cut(s) | 1232 |
| BsaJI | CCNNGG | 6 cut(s) | 575, 875, 1595, 1642, 1856, 2847 |
| BsaWI | WCCGGW | 2 cut(s) | 1581, 3396 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 165, 1596, 2634 |
| Bse1I | ACTGG | 5 cut(s) | 314, 472, 2111, 2199, 2566 |
| Bse3DI | GCAATG | 3 cut(s) | 423, 453, 1197 |
| BseAI | TCCGGA | 1 cut(s) | 1581 |
| BseBI | CCWGG | 4 cut(s) | 485, 596, 1644, 2849 |
| BseCI | ATCGAT | 3 cut(s) | 1290, 2921, 2978 |
| BseDI | CCNNGG | 6 cut(s) | 575, 875, 1595, 1642, 1856, 2847 |
| BseGI | GGATG | 8 cut(s) | 468, 1073, 1081, 1509, 1888, 1951, 2152, 3066 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 165, 1596, 2634 |
| BseMI | GCAATG | 3 cut(s) | 423, 453, 1197 |
| BseMII | CTCAG | 3 cut(s) | 1218, 1607, 3000 |
| BseNI | ACTGG | 5 cut(s) | 314, 472, 2111, 2199, 2566 |
| BseRI | GAGGAG | 3 cut(s) | 1211, 2746, 2749 |
| BseSI | GKGCMC | 2 cut(s) | 425, 618 |
| BseXI | GCAGC | 5 cut(s) | 617, 1471, 1757, 1987, 3290 |
| BseYI | CCCAGC | 3 cut(s) | 514, 533, 582 |
| BsgI | GTGCAG | 1 cut(s) | 342 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2978 |
| BshFI | GGCC | 8 cut(s) | 555, 616, 662, 834, 861, 2446, 2564, 2784 |
| BshNI | GGYRCC | 3 cut(s) | 491, 529, 2374 |
| BshVI | ATCGAT | 3 cut(s) | 1290, 2921, 2978 |
| BsiEI | CGRYCG | 1 cut(s) | 2978 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2595, 2899 |
| BsiSI | CCGG | 2 cut(s) | 1582, 3397 |
| BslFI | GGGAC | 8 cut(s) | 462, 479, 1513, 1613, 2483, 2611, 2698, 3139 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 165, 1596, 2634 |
| BsmAI | GTCTC | 2 cut(s) | 217, 3063 |
| BsmFI | GGGAC | 8 cut(s) | 462, 479, 1513, 1613, 2483, 2611, 2698, 3139 |
| BsmI | GAATGC | 5 cut(s) | 272, 1371, 1500, 1662, 2797 |
| BsnI | GGCC | 8 cut(s) | 555, 616, 662, 834, 861, 2446, 2564, 2784 |
| BsoBI | CYCGRG | 2 cut(s) | 2595, 2899 |
| Bsp120I | GGGCCC | 1 cut(s) | 614 |
| Bsp1286I | GDGCHC | 2 cut(s) | 425, 618 |
| Bsp13I | TCCGGA | 1 cut(s) | 1581 |
| Bsp1407I | TGTACA | 1 cut(s) | 1563 |
| BspACI | CCGC | 8 cut(s) | 351, 414, 608, 1714, 2097, 2176, 2432, 2745 |
| BspANI | GGCC | 8 cut(s) | 555, 616, 662, 834, 861, 2446, 2564, 2784 |
| BspCNI | CTCAG | 3 cut(s) | 1217, 1608, 3001 |
| BspDI | ATCGAT | 3 cut(s) | 1290, 2921, 2978 |
| BspEI | TCCGGA | 1 cut(s) | 1581 |
| BspHI | TCATGA | 2 cut(s) | 1392, 2037 |
| BspLI | GGNNCC | 9 cut(s) | 389, 412, 450, 451, 493, 531, 616, 2376, 2989 |
| BspOI | GCTAGC | 1 cut(s) | 2480 |
| BspPI | GGATC | 4 cut(s) | 4, 73, 1286, 1409 |
| BspQI | GCTCTTC | 1 cut(s) | 2031 |
| BspT107I | GGYRCC | 3 cut(s) | 491, 529, 2374 |
| BsrDI | GCAATG | 3 cut(s) | 423, 453, 1197 |
| BsrGI | TGTACA | 1 cut(s) | 1563 |
| BsrI | ACTGG | 5 cut(s) | 314, 472, 2111, 2199, 2566 |
| BssECI | CCNNGG | 6 cut(s) | 575, 875, 1595, 1642, 1856, 2847 |
| BssNI | GRCGYC | 1 cut(s) | 1232 |
| BssSI | CACGAG | 1 cut(s) | 2120 |
| BssT1I | CCWWGG | 4 cut(s) | 575, 875, 1595, 1856 |
| Bst2BI | CACGAG | 1 cut(s) | 2120 |
| Bst2UI | CCWGG | 4 cut(s) | 485, 596, 1644, 2849 |
| Bst6I | CTCTTC | 1 cut(s) | 2031 |
| BstACI | GRCGYC | 1 cut(s) | 1232 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3172 |
| BstAUI | TGTACA | 1 cut(s) | 1563 |
| BstBAI | YACGTR | 3 cut(s) | 768, 865, 2948 |
| BstDEI | CTNAG | 5 cut(s) | 1204, 1499, 1616, 3009, 3403 |
| BstF5I | GGATG | 8 cut(s) | 468, 1073, 1081, 1509, 1888, 1951, 2152, 3066 |
| BstHHI | GCGC | 1 cut(s) | 601 |
| BstMAI | GTCTC | 2 cut(s) | 217, 3063 |
| BstMCI | CGRYCG | 1 cut(s) | 2978 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 605, 1556, 1644, 1982, 2131, 2732, 2741, 3172 |
| BstNI | CCWGG | 4 cut(s) | 485, 596, 1644, 2849 |
| BstNSI | RCATGY | 4 cut(s) | 605, 1606, 1747, 3236 |
| BstSCI | CCNGG | 4 cut(s) | 483, 594, 1642, 2847 |
| BstSFI | CTRYAG | 1 cut(s) | 372 |
| BstSLI | GKGCMC | 2 cut(s) | 425, 618 |
| BstV1I | GCAGC | 5 cut(s) | 617, 1471, 1757, 1987, 3290 |
| BstX2I | RGATCY | 1 cut(s) | 2116 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 582, 2515 |
| BstYI | RGATCY | 1 cut(s) | 2116 |
| Bsu15I | ATCGAT | 3 cut(s) | 1290, 2921, 2978 |
| BsuI | GTATCC | 3 cut(s) | 1976, 2948, 3404 |
| BsuRI | GGCC | 8 cut(s) | 555, 616, 662, 834, 861, 2446, 2564, 2784 |
| BsuTUI | ATCGAT | 3 cut(s) | 1290, 2921, 2978 |
| BtrI | CACGTC | 1 cut(s) | 2046 |
| BtsCI | GGATG | 8 cut(s) | 468, 1073, 1081, 1509, 1888, 1951, 2152, 3066 |
| BtsIMutI | CAGTG | 5 cut(s) | 1887, 2181, 2206, 2573, 3006 |
| CciI | TCATGA | 2 cut(s) | 1392, 2037 |
| CfoI | GCGC | 1 cut(s) | 601 |
| ClaI | ATCGAT | 3 cut(s) | 1290, 2921, 2978 |
| CseI | GACGC | 1 cut(s) | 1221 |
| Csp6I | GTAC | 5 cut(s) | 1564, 1576, 2179, 3355, 3493 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1284, 1319, 2983, 3018 |
| CviQI | GTAC | 5 cut(s) | 1564, 1576, 2179, 3355, 3493 |
| DdeI | CTNAG | 5 cut(s) | 1204, 1499, 1616, 3009, 3403 |
| DraI | TTTAAA | 6 cut(s) | 748, 955, 2343, 2362, 3267, 3316 |
| EaeI | YGGCCR | 1 cut(s) | 859 |
| Eam1104I | CTCTTC | 1 cut(s) | 2031 |
| EarI | CTCTTC | 1 cut(s) | 2031 |
| EciI | GGCGGA | 1 cut(s) | 2447 |
| Eco130I | CCWWGG | 4 cut(s) | 575, 875, 1595, 1856 |
| Eco24I | GRGCYC | 1 cut(s) | 618 |
| Eco47I | GGWCC | 5 cut(s) | 449, 777, 2109, 2851, 3399 |
| Eco72I | CACGTG | 1 cut(s) | 865 |
| Eco88I | CYCGRG | 2 cut(s) | 2595, 2899 |
| EcoO109I | RGGNCCY | 2 cut(s) | 449, 614 |
| EcoRII | CCWGG | 4 cut(s) | 483, 594, 1642, 2847 |
| EcoT14I | CCWWGG | 4 cut(s) | 575, 875, 1595, 1856 |
| EcoT22I | ATGCAT | 1 cut(s) | 1075 |
| EcoT38I | GRGCYC | 1 cut(s) | 618 |
| ErhI | CCWWGG | 4 cut(s) | 575, 875, 1595, 1856 |
| FaqI | GGGAC | 8 cut(s) | 462, 479, 1513, 1613, 2483, 2611, 2698, 3139 |
| FbaI | TGATCA | 2 cut(s) | 1149, 1339 |
| FblI | GTMKAC | 2 cut(s) | 702, 1865 |
| Fnu4HI | GCNGC | 8 cut(s) | 606, 609, 1485, 1771, 2001, 2097, 2745, 3304 |
| FokI | GGATG | 8 cut(s) | 455, 1060, 1068, 1516, 1875, 1958, 2159, 3053 |
| FriOI | GRGCYC | 1 cut(s) | 618 |
| Fsp4HI | GCNGC | 8 cut(s) | 606, 609, 1485, 1771, 2001, 2097, 2745, 3304 |
| GlaI | GCGC | 1 cut(s) | 600 |
| GluI | GCNGC | 8 cut(s) | 606, 609, 1485, 1771, 2001, 2097, 2745, 3304 |
| GsaI | CCCAGC | 3 cut(s) | 518, 537, 586 |
| GsuI | CTGGAG | 1 cut(s) | 1544 |
| HaeIII | GGCC | 8 cut(s) | 555, 616, 662, 834, 861, 2446, 2564, 2784 |
| HapII | CCGG | 2 cut(s) | 1582, 3397 |
| HgaI | GACGC | 1 cut(s) | 1221 |
| HhaI | GCGC | 1 cut(s) | 601 |
| Hin1I | GRCGYC | 1 cut(s) | 1232 |
| Hin6I | GCGC | 1 cut(s) | 599 |
| HinP1I | GCGC | 1 cut(s) | 599 |
| HindIII | AAGCTT | 3 cut(s) | 178, 2236, 3168 |
| HinfI | GANTC | 9 cut(s) | 54, 322, 364, 1202, 1526, 1691, 2540, 3429, 3520 |
| HpaII | CCGG | 2 cut(s) | 1582, 3397 |
| HphI | GGTGA | 4 cut(s) | 783, 1637, 1690, 2230 |
| Hpy166II | GTNNAC | 8 cut(s) | 307, 703, 780, 1566, 1866, 2181, 3357, 3409 |
| Hpy188I | TCNGA | 8 cut(s) | 646, 762, 845, 1207, 1617, 2310, 2764, 2939 |
| Hpy8I | GTNNAC | 8 cut(s) | 307, 703, 780, 1566, 1866, 2181, 3357, 3409 |
| Hpy99I | CGWCG | 2 cut(s) | 1765, 1788 |
| HpyAV | CCTTC | 7 cut(s) | 1157, 1215, 1602, 1615, 1936, 2209, 3080 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 605, 1556, 1644, 1982, 2131, 2732, 2741, 3172 |
| HpyF3I | CTNAG | 5 cut(s) | 1204, 1499, 1616, 3009, 3403 |
| Hsp92I | GRCGYC | 1 cut(s) | 1232 |
| HspAI | GCGC | 1 cut(s) | 599 |
| KflI | GGGWCCC | 1 cut(s) | 449 |
| Kpn2I | TCCGGA | 1 cut(s) | 1581 |
| Ksp22I | TGATCA | 2 cut(s) | 1149, 1339 |
| LguI | GCTCTTC | 1 cut(s) | 2031 |
| LmnI | GCTCC | 5 cut(s) | 579, 1669, 1825, 1951, 2993 |
| Lsp1109I | GCAGC | 5 cut(s) | 617, 1471, 1757, 1987, 3290 |
| LweI | GCATC | 8 cut(s) | 70, 1082, 1524, 1620, 2083, 2427, 3133, 3258 |
| MaeIII | GTNAC | 3 cut(s) | 1233, 1678, 2153 |
| MfeI | CAATTG | 1 cut(s) | 170 |
| MflI | RGATCY | 1 cut(s) | 2116 |
| MhlI | GDGCHC | 2 cut(s) | 425, 618 |
| MlsI | TGGCCA | 1 cut(s) | 861 |
| MluNI | TGGCCA | 1 cut(s) | 861 |
| MlyI | GAGTC | 3 cut(s) | 1196, 1535, 1700 |
| MmeI | TCCRAC | 6 cut(s) | 689, 709, 2118, 2787, 2945, 3015 |
| Mox20I | TGGCCA | 1 cut(s) | 861 |
| Mph1103I | ATGCAT | 1 cut(s) | 1075 |
| MroI | TCCGGA | 1 cut(s) | 1581 |
| MscI | TGGCCA | 1 cut(s) | 861 |
| MslI | CAYNNNNRTG | 7 cut(s) | 2039, 2069, 2186, 3231, 3233, 3235, 3237 |
| Msp20I | TGGCCA | 1 cut(s) | 861 |
| MspA1I | CMGCKG | 3 cut(s) | 608, 1484, 2176 |
| MspI | CCGG | 2 cut(s) | 1582, 3397 |
| MspR9I | CCNGG | 4 cut(s) | 485, 596, 1644, 2849 |
| MunI | CAATTG | 1 cut(s) | 170 |
| Mva1269I | GAATGC | 5 cut(s) | 272, 1371, 1500, 1662, 2797 |
| MvaI | CCWGG | 4 cut(s) | 485, 596, 1644, 2849 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 605, 1556, 1644, 1982, 2131, 2732, 2741, 3172 |
| NheI | GCTAGC | 1 cut(s) | 2476 |
| NlaIV | GGNNCC | 9 cut(s) | 389, 412, 450, 451, 493, 531, 616, 2376, 2989 |
| NmuCI | GTSAC | 2 cut(s) | 1233, 1678 |
| NsiI | ATGCAT | 1 cut(s) | 1075 |
| NspI | RCATGY | 4 cut(s) | 605, 1606, 1747, 3236 |
| OliI | CACNNNNGTG | 3 cut(s) | 2186, 3233, 3235 |
| PacI | TTAATTAA | 1 cut(s) | 2871 |
| PaeI | GCATGC | 2 cut(s) | 605, 1747 |
| PaeR7I | CTCGAG | 2 cut(s) | 2595, 2899 |
| PagI | TCATGA | 2 cut(s) | 1392, 2037 |
| PciI | ACATGT | 1 cut(s) | 3232 |
| PciSI | GCTCTTC | 1 cut(s) | 2031 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2149 |
| PctI | GAATGC | 5 cut(s) | 272, 1371, 1500, 1662, 2797 |
| PfeI | GAWTC | 6 cut(s) | 54, 322, 364, 2540, 3429, 3520 |
| PkrI | GCNGC | 8 cut(s) | 607, 610, 1486, 1772, 2002, 2098, 2746, 3305 |
| Ple19I | CGATCG | 1 cut(s) | 2978 |
| PleI | GAGTC | 3 cut(s) | 1196, 1534, 1699 |
| PmaCI | CACGTG | 1 cut(s) | 865 |
| PmlI | CACGTG | 1 cut(s) | 865 |
| PpsI | GAGTC | 3 cut(s) | 1196, 1534, 1699 |
| Ppu21I | YACGTR | 3 cut(s) | 768, 865, 2948 |
| PpuMI | RGGWCCY | 1 cut(s) | 449 |
| PscI | ACATGT | 1 cut(s) | 3232 |
| Psp5II | RGGWCCY | 1 cut(s) | 449 |
| Psp6I | CCWGG | 4 cut(s) | 483, 594, 1642, 2847 |
| PspCI | CACGTG | 1 cut(s) | 865 |
| PspFI | CCCAGC | 3 cut(s) | 514, 533, 582 |
| PspGI | CCWGG | 4 cut(s) | 483, 594, 1642, 2847 |
| PspN4I | GGNNCC | 9 cut(s) | 389, 412, 450, 451, 493, 531, 616, 2376, 2989 |
| PspOMI | GGGCCC | 1 cut(s) | 614 |
| PspPPI | RGGWCCY | 1 cut(s) | 449 |
| PspXI | VCTCGAGB | 1 cut(s) | 2595 |
| PsuI | RGATCY | 1 cut(s) | 2116 |
| PvuI | CGATCG | 1 cut(s) | 2978 |
| PvuII | CAGCTG | 1 cut(s) | 1484 |
| RsaI | GTAC | 5 cut(s) | 1565, 1577, 2180, 3356, 3494 |
| RsaNI | GTAC | 5 cut(s) | 1564, 1576, 2179, 3355, 3493 |
| RseI | CAYNNNNRTG | 7 cut(s) | 2039, 2069, 2186, 3231, 3233, 3235, 3237 |
| SapI | GCTCTTC | 1 cut(s) | 2031 |
| SatI | GCNGC | 8 cut(s) | 606, 609, 1485, 1771, 2001, 2097, 2745, 3304 |
| SchI | GAGTC | 3 cut(s) | 1196, 1535, 1700 |
| ScrFI | CCNGG | 4 cut(s) | 485, 596, 1644, 2849 |
| SduI | GDGCHC | 2 cut(s) | 425, 618 |
| SfaNI | GCATC | 8 cut(s) | 70, 1082, 1524, 1620, 2083, 2427, 3133, 3258 |
| SfcI | CTRYAG | 1 cut(s) | 372 |
| Sfr274I | CTCGAG | 2 cut(s) | 2595, 2899 |
| SinI | GGWCC | 5 cut(s) | 449, 777, 2109, 2851, 3399 |
| SlaI | CTCGAG | 2 cut(s) | 2595, 2899 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 2039, 2069, 2186, 3231, 3233, 3235, 3237 |
| SmlI | CTYRAG | 8 cut(s) | 163, 1106, 1157, 2481, 2595, 2899, 3348, 3362 |
| SmoI | CTYRAG | 8 cut(s) | 163, 1106, 1157, 2481, 2595, 2899, 3348, 3362 |
| SphI | GCATGC | 2 cut(s) | 605, 1747 |
| SsiI | CCGC | 8 cut(s) | 351, 414, 608, 1714, 2097, 2176, 2432, 2745 |
| SspI | AATATT | 6 cut(s) | 895, 1021, 2357, 3148, 3179, 3456 |
| StyD4I | CCNGG | 4 cut(s) | 483, 594, 1642, 2847 |
| StyI | CCWWGG | 4 cut(s) | 575, 875, 1595, 1856 |
| TaqII | GACCGA | 1 cut(s) | 2126 |
| TatI | WGTACW | 1 cut(s) | 1563 |
| TauI | GCSGC | 3 cut(s) | 611, 2099, 2747 |
| TfiI | GAWTC | 6 cut(s) | 54, 322, 364, 2540, 3429, 3520 |
| TscAI | CASTG | 5 cut(s) | 1887, 2188, 2206, 2573, 3013 |
| TseFI | GTSAC | 2 cut(s) | 1233, 1678 |
| TseI | GCWGC | 5 cut(s) | 605, 1484, 1770, 2000, 3303 |
| Tsp45I | GTSAC | 2 cut(s) | 1233, 1678 |
| TspDTI | ATGAA | 8 cut(s) | 141, 330, 1080, 1712, 2175, 2447, 2670, 3177 |
| TspGWI | ACGGA | 1 cut(s) | 1838 |
| TspRI | CASTG | 5 cut(s) | 1887, 2188, 2206, 2573, 3013 |
| VpaK11BI | GGWCC | 5 cut(s) | 449, 777, 2109, 2851, 3399 |
| XapI | RAATTY | 9 cut(s) | 17, 95, 730, 947, 2525, 2932, 3014, 3262, 3418 |
| XbaI | TCTAGA | 1 cut(s) | 262 |
| XceI | RCATGY | 4 cut(s) | 605, 1606, 1747, 3236 |
| XhoI | CTCGAG | 2 cut(s) | 2595, 2899 |
| XmiI | GTMKAC | 2 cut(s) | 702, 1865 |
| Zsp2I | ATGCAT | 1 cut(s) | 1075 |