Ribosomal protein-like protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 436 |
| Acc36I | ACCTGC | 1 cut(s) | 478 |
| Acc65I | GGTACC | 1 cut(s) | 1212 |
| AccB1I | GGYRCC | 1 cut(s) | 1212 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 39, 1145 |
| AccIII | TCCGGA | 1 cut(s) | 441 |
| AciI | CCGC | 3 cut(s) | 514, 529, 1321 |
| AclWI | GGATC | 7 cut(s) | 154, 647, 663, 676, 1070, 1233, 1358 |
| AcoI | YGGCCR | 1 cut(s) | 1318 |
| AcsI | RAATTY | 3 cut(s) | 71, 133, 973 |
| AcyI | GRCGYC | 2 cut(s) | 433, 451 |
| AfaI | GTAC | 5 cut(s) | 413, 1214, 1378, 1460, 1498 |
| AjnI | CCWGG | 1 cut(s) | 664 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1463, 1495 |
| AluBI | AGCT | 2 cut(s) | 596, 908 |
| AluI | AGCT | 2 cut(s) | 596, 908 |
| Alw26I | GTCTC | 2 cut(s) | 208, 1420 |
| AlwI | GGATC | 7 cut(s) | 154, 647, 663, 676, 1070, 1233, 1358 |
| Aor13HI | TCCGGA | 1 cut(s) | 441 |
| AoxI | GGCC | 6 cut(s) | 526, 1118, 1245, 1318, 1558, 1595 |
| ApeKI | GCWGC | 1 cut(s) | 275 |
| ApoI | RAATTY | 3 cut(s) | 71, 133, 973 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 243 |
| Asp718I | GGTACC | 1 cut(s) | 1212 |
| AspA2I | CCTAGG | 1 cut(s) | 842 |
| AspLEI | GCGC | 4 cut(s) | 208, 258, 370, 1179 |
| AspS9I | GGNCC | 3 cut(s) | 171, 1245, 1596 |
| AsuHPI | GGTGA | 2 cut(s) | 534, 693 |
| AvaII | GGWCC | 1 cut(s) | 171 |
| AvrII | CCTAGG | 1 cut(s) | 842 |
| BamHI | GGATCC | 1 cut(s) | 668 |
| BanI | GGYRCC | 1 cut(s) | 1212 |
| BanII | GRGCYC | 1 cut(s) | 1099 |
| BbsI | GAAGAC | 1 cut(s) | 451 |
| BbvCI | CCTCAGC | 1 cut(s) | 592 |
| BbvI | GCAGC | 1 cut(s) | 287 |
| BccI | CCATC | 8 cut(s) | 30, 358, 598, 992, 1031, 1043, 1307, 1438 |
| BceAI | ACGGC | 1 cut(s) | 1445 |
| BciT130I | CCWGG | 1 cut(s) | 666 |
| BcoDI | GTCTC | 2 cut(s) | 208, 1420 |
| BfaI | CTAG | 2 cut(s) | 843, 1100 |
| BfmI | CTRYAG | 1 cut(s) | 1180 |
| BfoI | RGCGCY | 1 cut(s) | 1180 |
| BfuAI | ACCTGC | 1 cut(s) | 478 |
| BisI | GCNGC | 3 cut(s) | 276, 529, 1321 |
| BlnI | CCTAGG | 1 cut(s) | 842 |
| BlsI | GCNGC | 3 cut(s) | 277, 530, 1322 |
| Bme1390I | CCNGG | 1 cut(s) | 666 |
| Bme18I | GGWCC | 1 cut(s) | 171 |
| BmgT120I | GGNCC | 3 cut(s) | 171, 1245, 1596 |
| BmiI | GGNNCC | 5 cut(s) | 172, 589, 670, 1214, 1598 |
| BmrFI | CCNGG | 1 cut(s) | 666 |
| BmsI | GCATC | 2 cut(s) | 841, 1008 |
| BoxI | GACNNNNGTC | 1 cut(s) | 821 |
| BpiI | GAAGAC | 1 cut(s) | 451 |
| Bpu10I | CCTNAGC | 1 cut(s) | 592 |
| BsaAI | YACGTR | 1 cut(s) | 1297 |
| BsaBI | GATNNNNATC | 1 cut(s) | 151 |
| BsaHI | GRCGYC | 2 cut(s) | 433, 451 |
| BsaJI | CCNNGG | 3 cut(s) | 282, 664, 842 |
| BsaWI | WCCGGW | 2 cut(s) | 441, 888 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1463, 1493 |
| Bse118I | RCCGGY | 1 cut(s) | 949 |
| Bse1I | ACTGG | 2 cut(s) | 1150, 1593 |
| Bse3DI | GCAATG | 1 cut(s) | 135 |
| Bse8I | GATNNNNATC | 1 cut(s) | 151 |
| BseAI | TCCGGA | 1 cut(s) | 441 |
| BseBI | CCWGG | 1 cut(s) | 666 |
| BseDI | CCNNGG | 3 cut(s) | 282, 664, 842 |
| BseGI | GGATG | 6 cut(s) | 152, 176, 450, 613, 1033, 1336 |
| BseJI | GATNNNNATC | 1 cut(s) | 151 |
| BseMI | GCAATG | 1 cut(s) | 135 |
| BseMII | CTCAG | 4 cut(s) | 291, 606, 1275, 1458 |
| BseNI | ACTGG | 2 cut(s) | 1150, 1593 |
| BseRI | GAGGAG | 2 cut(s) | 242, 580 |
| BseXI | GCAGC | 1 cut(s) | 287 |
| Bsh1285I | CGRYCG | 1 cut(s) | 763 |
| BshFI | GGCC | 6 cut(s) | 528, 1120, 1247, 1320, 1560, 1597 |
| BshNI | GGYRCC | 1 cut(s) | 1212 |
| BsiEI | CGRYCG | 1 cut(s) | 763 |
| BsiSI | CCGG | 3 cut(s) | 442, 889, 950 |
| BslFI | GGGAC | 2 cut(s) | 530, 647 |
| BsmAI | GTCTC | 2 cut(s) | 208, 1420 |
| BsmBI | CGTCTC | 2 cut(s) | 208, 1420 |
| BsmFI | GGGAC | 2 cut(s) | 530, 647 |
| BsnI | GGCC | 6 cut(s) | 528, 1120, 1247, 1320, 1560, 1597 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1099 |
| Bsp13I | TCCGGA | 1 cut(s) | 441 |
| Bsp1407I | TGTACA | 2 cut(s) | 411, 1496 |
| Bsp143I | GATC | 7 cut(s) | 24, 146, 639, 668, 1075, 1225, 1363 |
| Bsp19I | CCATGG | 1 cut(s) | 282 |
| BspACI | CCGC | 3 cut(s) | 514, 529, 1321 |
| BspANI | GGCC | 6 cut(s) | 528, 1120, 1247, 1320, 1560, 1597 |
| BspCNI | CTCAG | 4 cut(s) | 292, 605, 1276, 1459 |
| BspEI | TCCGGA | 1 cut(s) | 441 |
| BspHI | TCATGA | 1 cut(s) | 987 |
| BspLI | GGNNCC | 5 cut(s) | 172, 589, 670, 1214, 1598 |
| BspMI | ACCTGC | 1 cut(s) | 478 |
| BspPI | GGATC | 7 cut(s) | 154, 647, 663, 676, 1070, 1233, 1358 |
| BspT107I | GGYRCC | 1 cut(s) | 1212 |
| BsrDI | GCAATG | 1 cut(s) | 135 |
| BsrFI | RCCGGY | 1 cut(s) | 949 |
| BsrGI | TGTACA | 2 cut(s) | 411, 1496 |
| BsrI | ACTGG | 2 cut(s) | 1150, 1593 |
| BssAI | RCCGGY | 1 cut(s) | 949 |
| BssECI | CCNNGG | 3 cut(s) | 282, 664, 842 |
| BssMI | GATC | 7 cut(s) | 24, 146, 639, 668, 1075, 1225, 1363 |
| BssNI | GRCGYC | 2 cut(s) | 433, 451 |
| BssT1I | CCWWGG | 2 cut(s) | 282, 842 |
| Bst2UI | CCWGG | 1 cut(s) | 666 |
| Bst4CI | ACNGT | 6 cut(s) | 562, 688, 761, 930, 1327, 1381 |
| Bst6I | CTCTTC | 2 cut(s) | 414, 713 |
| BstACI | GRCGYC | 2 cut(s) | 433, 451 |
| BstAUI | TGTACA | 2 cut(s) | 411, 1496 |
| BstBAI | YACGTR | 1 cut(s) | 1297 |
| BstC8I | GCNNGC | 4 cut(s) | 372, 526, 648, 1582 |
| BstDEI | CTNAG | 4 cut(s) | 300, 592, 1284, 1467 |
| BstDSI | CCRYGG | 1 cut(s) | 282 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1220 |
| BstF5I | GGATG | 6 cut(s) | 152, 176, 450, 613, 1033, 1336 |
| BstH2I | RGCGCY | 1 cut(s) | 1180 |
| BstHHI | GCGC | 4 cut(s) | 208, 258, 370, 1179 |
| BstKTI | GATC | 7 cut(s) | 27, 149, 642, 671, 1078, 1228, 1366 |
| BstMAI | GTCTC | 2 cut(s) | 208, 1420 |
| BstMBI | GATC | 7 cut(s) | 24, 146, 639, 668, 1075, 1225, 1363 |
| BstMCI | CGRYCG | 1 cut(s) | 763 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 203, 1126 |
| BstNI | CCWGG | 1 cut(s) | 666 |
| BstNSI | RCATGY | 2 cut(s) | 374, 650 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 821 |
| BstSCI | CCNGG | 1 cut(s) | 664 |
| BstSFI | CTRYAG | 1 cut(s) | 1180 |
| BstV1I | GCAGC | 1 cut(s) | 287 |
| BstV2I | GAAGAC | 1 cut(s) | 451 |
| BstX2I | RGATCY | 5 cut(s) | 146, 639, 668, 1075, 1225 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1588 |
| BstYI | RGATCY | 5 cut(s) | 146, 639, 668, 1075, 1225 |
| BsuRI | GGCC | 6 cut(s) | 528, 1120, 1247, 1320, 1560, 1597 |
| BtgI | CCRYGG | 1 cut(s) | 282 |
| BtgZI | GCGATG | 1 cut(s) | 377 |
| BtsCI | GGATG | 6 cut(s) | 152, 176, 450, 613, 1033, 1336 |
| BtsIMutI | CAGTG | 4 cut(s) | 1323, 1386, 1428, 1464 |
| BveI | ACCTGC | 1 cut(s) | 478 |
| Cac8I | GCNNGC | 4 cut(s) | 372, 526, 648, 1582 |
| CciI | TCATGA | 1 cut(s) | 987 |
| CfoI | GCGC | 4 cut(s) | 208, 258, 370, 1179 |
| Cfr10I | RCCGGY | 1 cut(s) | 949 |
| Cfr13I | GGNCC | 3 cut(s) | 171, 1245, 1596 |
| CseI | GACGC | 1 cut(s) | 440 |
| Csp6I | GTAC | 5 cut(s) | 412, 1213, 1377, 1459, 1497 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 911, 946 |
| CviQI | GTAC | 5 cut(s) | 412, 1213, 1377, 1459, 1497 |
| DdeI | CTNAG | 4 cut(s) | 300, 592, 1284, 1467 |
| DpnI | GATC | 7 cut(s) | 26, 148, 641, 670, 1077, 1227, 1365 |
| DpnII | GATC | 7 cut(s) | 24, 146, 639, 668, 1075, 1225, 1363 |
| DraI | TTTAAA | 1 cut(s) | 70 |
| EaeI | YGGCCR | 1 cut(s) | 1318 |
| Eam1104I | CTCTTC | 2 cut(s) | 414, 713 |
| EarI | CTCTTC | 2 cut(s) | 414, 713 |
| Eco130I | CCWWGG | 2 cut(s) | 282, 842 |
| Eco147I | AGGCCT | 1 cut(s) | 1120 |
| Eco24I | GRGCYC | 1 cut(s) | 1099 |
| Eco32I | GATATC | 1 cut(s) | 19 |
| Eco47I | GGWCC | 1 cut(s) | 171 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1220 |
| EcoO109I | RGGNCCY | 1 cut(s) | 171 |
| EcoRI | GAATTC | 1 cut(s) | 133 |
| EcoRII | CCWGG | 1 cut(s) | 664 |
| EcoRV | GATATC | 1 cut(s) | 19 |
| EcoT14I | CCWWGG | 2 cut(s) | 282, 842 |
| EcoT38I | GRGCYC | 1 cut(s) | 1099 |
| ErhI | CCWWGG | 2 cut(s) | 282, 842 |
| Esp3I | CGTCTC | 2 cut(s) | 208, 1420 |
| FaqI | GGGAC | 2 cut(s) | 530, 647 |
| FauI | CCCGC | 1 cut(s) | 507 |
| FauNDI | CATATG | 2 cut(s) | 583, 628 |
| Fnu4HI | GCNGC | 3 cut(s) | 276, 529, 1321 |
| FokI | GGATG | 6 cut(s) | 139, 163, 457, 620, 1040, 1343 |
| FriOI | GRGCYC | 1 cut(s) | 1099 |
| Fsp4HI | GCNGC | 3 cut(s) | 276, 529, 1321 |
| FspBI | CTAG | 2 cut(s) | 843, 1100 |
| GlaI | GCGC | 4 cut(s) | 207, 257, 369, 1178 |
| GluI | GCNGC | 3 cut(s) | 276, 529, 1321 |
| HaeII | RGCGCY | 1 cut(s) | 1180 |
| HaeIII | GGCC | 6 cut(s) | 528, 1120, 1247, 1320, 1560, 1597 |
| HapII | CCGG | 3 cut(s) | 442, 889, 950 |
| HgaI | GACGC | 1 cut(s) | 440 |
| HhaI | GCGC | 4 cut(s) | 208, 258, 370, 1179 |
| Hin1I | GRCGYC | 2 cut(s) | 433, 451 |
| Hin6I | GCGC | 4 cut(s) | 206, 256, 368, 1177 |
| HinP1I | GCGC | 4 cut(s) | 206, 256, 368, 1177 |
| HincII | GTYRAC | 1 cut(s) | 1350 |
| HindII | GTYRAC | 1 cut(s) | 1350 |
| HinfI | GANTC | 6 cut(s) | 230, 599, 660, 964, 1418, 1478 |
| HpaI | GTTAAC | 1 cut(s) | 1350 |
| HpaII | CCGG | 3 cut(s) | 442, 889, 950 |
| HphI | GGTGA | 2 cut(s) | 534, 693 |
| Hpy166II | GTNNAC | 7 cut(s) | 412, 414, 470, 701, 867, 1350, 1497 |
| Hpy188I | TCNGA | 6 cut(s) | 235, 381, 431, 552, 572, 1534 |
| Hpy188III | TCNNGA | 8 cut(s) | 22, 33, 442, 476, 764, 968, 988, 1089 |
| Hpy8I | GTNNAC | 7 cut(s) | 412, 414, 470, 701, 867, 1350, 1497 |
| Hpy99I | CGWCG | 1 cut(s) | 438 |
| HpyAV | CCTTC | 5 cut(s) | 547, 719, 1086, 1258, 1294 |
| HpyCH4III | ACNGT | 6 cut(s) | 562, 688, 761, 930, 1327, 1381 |
| HpyCH4IV | ACGT | 4 cut(s) | 433, 1192, 1296, 1352 |
| HpyCH4V | TGCA | 6 cut(s) | 100, 128, 566, 854, 999, 1235 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 203, 1126 |
| HpyF3I | CTNAG | 4 cut(s) | 300, 592, 1284, 1467 |
| HpySE526I | ACGT | 4 cut(s) | 433, 1192, 1296, 1352 |
| Hsp92I | GRCGYC | 2 cut(s) | 433, 451 |
| HspAI | GCGC | 4 cut(s) | 206, 256, 368, 1177 |
| Kpn2I | TCCGGA | 1 cut(s) | 441 |
| KpnI | GGTACC | 1 cut(s) | 1216 |
| KspAI | GTTAAC | 1 cut(s) | 1350 |
| Kzo9I | GATC | 7 cut(s) | 24, 146, 639, 668, 1075, 1225, 1363 |
| LmnI | GCTCC | 1 cut(s) | 593 |
| Lsp1109I | GCAGC | 1 cut(s) | 287 |
| LweI | GCATC | 2 cut(s) | 841, 1008 |
| MaeI | CTAG | 2 cut(s) | 843, 1100 |
| MaeII | ACGT | 4 cut(s) | 433, 1192, 1296, 1352 |
| MaeIII | GTNAC | 1 cut(s) | 556 |
| MalI | GATC | 7 cut(s) | 26, 148, 641, 670, 1077, 1227, 1365 |
| MboI | GATC | 7 cut(s) | 24, 146, 639, 668, 1075, 1225, 1363 |
| MboII | GAAGA | 9 cut(s) | 141, 233, 251, 431, 451, 700, 946, 1085, 1322 |
| MfeI | CAATTG | 1 cut(s) | 163 |
| MflI | RGATCY | 5 cut(s) | 146, 639, 668, 1075, 1225 |
| MhlI | GDGCHC | 1 cut(s) | 1099 |
| MlyI | GAGTC | 4 cut(s) | 239, 669, 973, 1472 |
| MmeI | TCCRAC | 1 cut(s) | 162 |
| MroI | TCCGGA | 1 cut(s) | 441 |
| MroXI | GAANNNNTTC | 1 cut(s) | 243 |
| MseI | TTAA | 2 cut(s) | 69, 1349 |
| MslI | CAYNNNNRTG | 1 cut(s) | 989 |
| MspA1I | CMGCKG | 1 cut(s) | 596 |
| MspI | CCGG | 3 cut(s) | 442, 889, 950 |
| MspR9I | CCNGG | 1 cut(s) | 666 |
| MunI | CAATTG | 1 cut(s) | 163 |
| MvaI | CCWGG | 1 cut(s) | 666 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 203, 1126 |
| NcoI | CCATGG | 1 cut(s) | 282 |
| NdeI | CATATG | 2 cut(s) | 583, 628 |
| NdeII | GATC | 7 cut(s) | 24, 146, 639, 668, 1075, 1225, 1363 |
| NlaIV | GGNNCC | 5 cut(s) | 172, 589, 670, 1214, 1598 |
| NspI | RCATGY | 2 cut(s) | 374, 650 |
| PaeI | GCATGC | 2 cut(s) | 374, 650 |
| PagI | TCATGA | 1 cut(s) | 987 |
| PceI | AGGCCT | 1 cut(s) | 1120 |
| PdmI | GAANNNNTTC | 1 cut(s) | 243 |
| PfeI | GAWTC | 2 cut(s) | 599, 1418 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 39, 1145 |
| PkrI | GCNGC | 3 cut(s) | 277, 530, 1322 |
| PleI | GAGTC | 4 cut(s) | 238, 668, 972, 1472 |
| PpsI | GAGTC | 4 cut(s) | 238, 668, 972, 1472 |
| Ppu21I | YACGTR | 1 cut(s) | 1297 |
| PpuMI | RGGWCCY | 1 cut(s) | 171 |
| PshAI | GACNNNNGTC | 1 cut(s) | 821 |
| Psp5II | RGGWCCY | 1 cut(s) | 171 |
| Psp6I | CCWGG | 1 cut(s) | 664 |
| PspGI | CCWGG | 1 cut(s) | 664 |
| PspN4I | GGNNCC | 5 cut(s) | 172, 589, 670, 1214, 1598 |
| PspPI | GGNCC | 3 cut(s) | 171, 1245, 1596 |
| PspPPI | RGGWCCY | 1 cut(s) | 171 |
| PsuI | RGATCY | 5 cut(s) | 146, 639, 668, 1075, 1225 |
| PvuII | CAGCTG | 1 cut(s) | 596 |
| RsaI | GTAC | 5 cut(s) | 413, 1214, 1378, 1460, 1498 |
| RsaNI | GTAC | 5 cut(s) | 412, 1213, 1377, 1459, 1497 |
| RseI | CAYNNNNRTG | 1 cut(s) | 989 |
| SaqAI | TTAA | 2 cut(s) | 69, 1349 |
| SatI | GCNGC | 3 cut(s) | 276, 529, 1321 |
| Sau3AI | GATC | 7 cut(s) | 24, 146, 639, 668, 1075, 1225, 1363 |
| Sau96I | GGNCC | 3 cut(s) | 171, 1245, 1596 |
| SchI | GAGTC | 4 cut(s) | 239, 669, 973, 1472 |
| ScrFI | CCNGG | 1 cut(s) | 666 |
| SduI | GDGCHC | 1 cut(s) | 1099 |
| SfaNI | GCATC | 2 cut(s) | 841, 1008 |
| SfcI | CTRYAG | 1 cut(s) | 1180 |
| SinI | GGWCC | 1 cut(s) | 171 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 989 |
| SphI | GCATGC | 2 cut(s) | 374, 650 |
| SseBI | AGGCCT | 1 cut(s) | 1120 |
| SsiI | CCGC | 3 cut(s) | 514, 529, 1321 |
| SspMI | CTAG | 2 cut(s) | 843, 1100 |
| StuI | AGGCCT | 1 cut(s) | 1120 |
| StyD4I | CCNGG | 1 cut(s) | 664 |
| StyI | CCWWGG | 2 cut(s) | 282, 842 |
| TaaI | ACNGT | 6 cut(s) | 562, 688, 761, 930, 1327, 1381 |
| TaiI | ACGT | 4 cut(s) | 436, 1195, 1299, 1355 |
| TaqI | TCGA | 4 cut(s) | 462, 505, 602, 967 |
| TatI | WGTACW | 3 cut(s) | 411, 1458, 1496 |
| TauI | GCSGC | 2 cut(s) | 531, 1323 |
| TfiI | GAWTC | 2 cut(s) | 599, 1418 |
| Tru1I | TTAA | 2 cut(s) | 69, 1349 |
| Tru9I | TTAA | 2 cut(s) | 69, 1349 |
| TscAI | CASTG | 4 cut(s) | 1330, 1386, 1428, 1471 |
| TseI | GCWGC | 1 cut(s) | 275 |
| TspDTI | ATGAA | 6 cut(s) | 141, 146, 252, 398, 624, 1590 |
| TspGWI | ACGGA | 1 cut(s) | 737 |
| TspRI | CASTG | 4 cut(s) | 1330, 1386, 1428, 1471 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 39, 1145 |
| VpaK11BI | GGWCC | 1 cut(s) | 171 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1220 |
| XapI | RAATTY | 3 cut(s) | 71, 133, 973 |
| XceI | RCATGY | 2 cut(s) | 374, 650 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 187, 1255 |
| XmaJI | CCTAGG | 1 cut(s) | 842 |
| XmnI | GAANNNNTTC | 1 cut(s) | 243 |
| XspI | CTAG | 2 cut(s) | 843, 1100 |
| ZraI | GACGTC | 1 cut(s) | 434 |